DriverScore	FusionID	Sample_Name	Program	Tot/span_reads	Split_reads	Chr1	Chr2	Gene_Start1	Gene_End1	Gene_Start2	Gene_End2	Strand1	Strand2	Gene_Name1	Gene_Name2	Gene_Breakpoint1	Gene_Breakpoint2	Gene_ID1	Gene_ID2	Sample_Type	Sample_occurrency_list	Sample_Type_occurency_list	Kinase_info	Transcript_ID1	Transcript_ID2	Reading_Frame_Info	Protein_Start1	Protein_End1	Protein_Start2	Protein_End2	Protein_Sequence	Exon_Gene1	Exon_Gene2	Breakpoint_Region1	Breakpoint_Region2	Conserved_Domain1	Lost_Domain1	Conserved_Domain2	Lost_Domain2
0.0003	4172	SRR064286	chimerascan	196	75	20	17	49411467	49411710	59445688	59470198	+	+	BCAS4	BCAS3	49411710	59445688	uc002xvq.2|uc002xvr.2|uc002xvq.2|uc002xvs.2|uc002xvp.1|uc002xvr.2|uc002xvs.2|uc002xvp.1|	uc002izc.3|uc002iyy.3|uc002iza.3|uc002iyw.3|uc002izb.3|uc002izc.3|uc002iyz.3|uc002iyu.3|uc002izb.3|uc002iyv.3|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000358791,ENST00000371608,ENST00000355583,ENST00000262591,	ENST00000390652,ENST00000407086,ENST00000408905,	FrameShift 	1:ENST00000358791,ENST00000371608,ENST00000355583,ENST00000262591, 	60:ENST00000358791,ENST00000371608,ENST00000355583,ENST00000262591, 	-1:ENST00000390652,ENST00000407086,ENST00000408905, 	-1:ENST00000390652,ENST00000407086,ENST00000408905, 	MQRTGGGAPRPGRNHGLPGSLRQPDPVALLMLLVDADQPEPMRSGARELALFLTPEPGAEVPLTGA*:ENST00000358791-ENST00000408905,ENST00000358791-ENST00000390652,ENST00000355583-ENST00000408905,ENST00000262591-ENST00000407086,ENST00000371608-ENST00000408905,ENST00000371608-ENST00000407086,ENST00000355583-ENST00000390652,ENST00000358791-ENST00000407086,ENST00000371608-ENST00000390652,ENST00000262591-ENST00000390652,ENST00000355583-ENST00000407086,ENST00000262591-ENST00000408905, 	Intron:ENST00000358791,ENST00000371608,ENST00000355583,ENST00000262591, 	22:ENST00000408905, 24:ENST00000407086, 23:ENST00000390652, 	CDS:ENST00000358791,ENST00000371608,ENST00000355583,ENST00000262591, 	CDS:ENST00000390652,ENST00000407086,ENST00000408905, 	NO_DOMAIN:ENST00000358791,ENST00000371608,ENST00000355583,ENST00000262591, 	NO_DOMAIN:ENST00000358791,ENST00000371608,ENST00000355583,ENST00000262591, 	NO_DOMAIN:ENST00000390652,ENST00000407086,ENST00000408905, 	Repeat=WD 1,Repeat=WD 2,Repeat=WD 3,Repeat=WD 4,Repeat=WD 5,Repeat=WD 6,Repeat=WD 7,:ENST00000390652,ENST00000407086,ENST00000408905, 
0.0001	4173	SRR064286	chimerascan	23	9	20	20	47538275	47538547	46286151	46365686	+	-	ARFGEF2	RP5-1049G16.1,SULF2	47538547	46365686	uc002xtx.3|uc002xtx.3|	uc010ghv.1|uc002xto.2|uc002xtr.2|uc002xtq.2|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000371917,	ENST00000359930,ENST00000484875,ENST00000467815,ENST00000361612,ENST00000447361,	FrameShift 	1:ENST00000371917, 	40:ENST00000371917, 	-1:ENST00000359930,ENST00000484875,ENST00000467815,ENST00000361612,ENST00000447361, 	-1:ENST00000359930,ENST00000484875,ENST00000467815,ENST00000361612,ENST00000447361, 	MQESQTKSMFVSRALEKILADKEVKRPQHSQLRRACQVALGVPCR*:ENST00000371917-ENST00000484875,ENST00000371917-ENST00000467815,ENST00000371917-ENST00000359930,ENST00000371917-ENST00000447361,ENST00000371917-ENST00000361612, 	Intron:ENST00000371917, 	Intron:ENST00000359930,ENST00000484875,ENST00000467815,ENST00000361612,ENST00000447361, 	CDS:ENST00000371917, 	CDS:ENST00000359930,ENST00000484875,ENST00000467815,ENST00000361612,ENST00000447361, 	Region=DCB%3B DCB:DCB domain and DCB:HUS domain interaction,:ENST00000371917, 	Domain=SEC7;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00189,Region=HUS%3B DCB:HUS domain interaction,:ENST00000371917, 	NO_DOMAIN:ENST00000359930,ENST00000484875,ENST00000467815,ENST00000361612,ENST00000447361, 	NO_DOMAIN:ENST00000359930,ENST00000484875,ENST00000467815,ENST00000361612,ENST00000447361, 
0.0022	4174	SRR064286	chimerascan	8	4	17	17	57183959	57184952	57915656	57917950	+	+	BC017255	TDC1,TMEM49	57184952	57915656	uc002ixb.2|	uc010woi.1|uc010woj.1|uc010woh.1|uc002ixu.3|uc010wog.1|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000262291,	InFrame 	-1:UnSpec, 	-1:UnSpec, 	325:ENST00000262291, 	406:ENST00000262291, 	AVPGIGPSLQKPFQEYLEAQRQKLHHKSEMGTPQGENWLSWMFEKLVVVMVCYFILSIINSMAQSYAKRIQQRLNSEEKTK:UnSpec-ENST00000262291, 	-1:UnSpec, 	11:ENST00000262291, 	Intergenic:UnSpec, 	CDS:ENST00000262291, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000262291, 	DOMAIN_UNK:ENST00000262291, 
0.0004	4175	SRR064286	chimerascan	7	3	14	14	96968720	96968937	96904172	96955112	+	+	PAPOLA	AK7	96968937	96904172	uc001yfq.2|uc001yfp.2|uc001yfo.2|uc001yfr.2|uc010twv.1|uc010avp.2|	uc001yfn.2|	breast_cancer	SRR064286,	breast_cancer,	3p_KINASE	ENST00000216277,	ENST00000267584,	FrameShift 	1:ENST00000216277, 	3:ENST00000216277, 	-1:ENST00000267584, 	-1:ENST00000267584, 	MPLPENLQHT*:ENST00000216277-ENST00000267584, 	Intron:ENST00000216277, 	6:ENST00000267584, 	CDS:ENST00000216277, 	CDS:ENST00000267584, 	NO_DOMAIN:ENST00000216277, 	Region=Ser/Thr-rich,Region=Required for interaction with NUDT21,:ENST00000216277, 	NO_DOMAIN:ENST00000267584, 	Region=Adenylate kinase;Ontology_term=ECO:0000305;evidence=ECO:0000305|PubMed:21080915;Dbxref=PMID:21080915,Region=NMPbind;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P69441,Region=LID;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P69441,Region=DPY-30;Ontology_term=ECO:0000305;evidence=ECO:0000305|PubMed:21080915;Dbxref=PMID:21080915,:ENST00000267584, 
0.0002	4176	SRR064286	chimerascan	6	5	1	1	114354332	114355070	114442494	114443859	-	+	RSBN1	AK123199	114354332	114442494	uc001edr.2|uc001edq.2|	uc001edv.1|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000261441,	UnSpec,	UnSpec 	1:ENST00000261441, 	234:ENST00000261441, 	-1:UnSpec, 	-1:UnSpec, 	MFISGRRTADKWRAEERLQCPAGSARAALARCADGGAVGPFKCVFVGEMAAQVGAVRVVRAVAAQEEPDKEGKEKPHAGVSPRGVKRQRRSSSGGSQEKRGRPSQEPPLAPPHRRRRSRQHPGPLPPTNAAPTVPGPVEPLLLPPPPPPSLAPAGPAVAAPLPAPSTSALFTFSPLTVSAAGPKHKGHKERHKHHHHRGPDGDPSSCGTDLKHKDKQENGERTGGVPLIKAPKR:ENST00000261441-UnSpec, 	1:ENST00000261441, 	-1:UnSpec, 	CDS:ENST00000261441, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000261441, 	DOMAIN_UNK:ENST00000261441, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.9942	4177	SRR064286	chimerascan	6	6	17	17	57970443	57992064	57917129	57917950	+	+	RPS6KB1	TDC1,TMEM49	57992064	57917129	uc010woo.1|uc010ddj.1|uc010wom.1|uc002ixy.2|	uc002ixu.3|uc010wog.1|uc010woi.1|uc010woh.1|uc010woj.1|	breast_cancer	SRR064286,	breast_cancer,	5p_KINASE	ENST00000406116,ENST00000225577,ENST00000425292,	ENST00000262291,	InFrame 	1:ENST00000406116,ENST00000225577,ENST00000425292, 	127:ENST00000406116,ENST00000225577,ENST00000425292, 	360:ENST00000262291, 	406:ENST00000262291, 	MRRRRRRDGFYPAPDFRDREAEDMAGVFDIDLDQPEDAGSEDELEEGGQLNESMDHGGVGPYELGMEHCEKFEISETSVNRGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKGENWLSWMFEKLVVVMVCYFILSIINSMAQSYAKRIQQRLNSEEKTK:ENST00000406116-ENST00000262291,ENST00000425292-ENST00000262291,ENST00000225577-ENST00000262291, 	Intron:ENST00000406116,ENST00000225577,ENST00000425292, 	12:ENST00000262291, 	CDS:ENST00000406116,ENST00000225577,ENST00000425292, 	CDS:ENST00000262291, 	Domain=Protein kinase;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00159,:ENST00000406116,ENST00000225577, NO_DOMAIN:ENST00000425292, 	Domain=AGC-kinase C-terminal,Region=Autoinhibitory domain,:ENST00000406116,ENST00000225577, NO_DOMAIN:ENST00000425292, 	Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,:ENST00000262291, 	NO_DOMAIN:ENST00000262291, 
0.0004	4178	SRR064286	chimerascan	5	4	X	X	16804560	16804712	16753350	16778994	+	+	CXorf15	SYAP1,DKFZp686K221	16804712	16753350	uc010ney.1|uc004cxq.1|	uc004cxp.2|uc004cxo.2|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000380122,ENST00000398155,	ENST00000380155,	FrameShift 	1:ENST00000380122,ENST00000398155, 	34:ENST00000380122,ENST00000398155, 	-1:ENST00000380155, 	-1:ENST00000380155, 	MATRVEEAARGRGGGAEEATEAGRGGRRRSPRQKAIYLTLHLLPQKR*:ENST00000398155-ENST00000380155,ENST00000380122-ENST00000380155, 	Intron:ENST00000380122,ENST00000398155, 	2:ENST00000380155, 	CDS:ENST00000380122,ENST00000398155, 	CDS:ENST00000380155, 	NO_DOMAIN:ENST00000380122,ENST00000398155, 	NO_DOMAIN:ENST00000380122,ENST00000398155, 	NO_DOMAIN:ENST00000380155, 	Domain=BSD;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00036,:ENST00000380155, 
0.0002	4179	SRR064286	chimerascan	5	2	2	17	142237965	142889270	37219556	37265644	-	-	LRP1B	TEM7,PLXDC1	142237965	37265644	uc002tvj.1|	uc002hrg.2|uc002hrk.1|uc002hri.2|uc002hrj.1|uc002hrh.2|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000389484,	ENST00000394318,ENST00000394316,ENST00000444911,ENST00000315392,	FrameShift 	1:ENST00000389484, 	114:ENST00000389484, 	-1:ENST00000394318,ENST00000394316,ENST00000444911,ENST00000315392, 	-1:ENST00000394318,ENST00000394316,ENST00000444911,ENST00000315392, 	MSEFLLALLTLSGLLPIARVLTVGADRDQQLCDPGEFLCHDHVTCVSQSWLCDGDPDCPDDSDESLDTCPEEVEIKCPLNHIACLGTNKCVHLSQLCNGVLDCPDGYDEGVHCQGGQPQLLCVPSLWPQRAPQPGTVGRCGRGQPEPSEDPHNTLQHPPAGFESGLVL*:ENST00000389484-ENST00000394318,ENST00000389484-ENST00000315392,ENST00000389484-ENST00000444911,ENST00000389484-ENST00000394316, 	3:ENST00000389484, 	Intron:ENST00000394318,ENST00000394316,ENST00000444911,ENST00000315392, 	CDS:ENST00000389484, 	CDS:ENST00000394318,ENST00000394316,ENST00000444911,ENST00000315392, 	Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=LDL-receptor class A 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=LDL-receptor class A 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,:ENST00000389484, 	Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=EGF-like 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 2%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Repeat=LDL-receptor class B 1,Repeat=LDL-receptor class B 2,Repeat=LDL-receptor class B 3,Domain=EGF-like 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Repeat=LDL-receptor class B 4,Repeat=LDL-receptor class B 5,Repeat=LDL-receptor class B 6,Repeat=LDL-receptor class B 7,Domain=EGF-like 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=LDL-receptor class A 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=LDL-receptor class A 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=LDL-receptor class A 5;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=LDL-receptor class A 6;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=LDL-receptor class A 7;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=LDL-receptor class A 8;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=LDL-receptor class A 9;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=LDL-receptor class A 10;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=EGF-like 5;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 6;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Repeat=LDL-receptor class B 8,Repeat=LDL-receptor class B 9,Repeat=LDL-receptor class B 10,Repeat=LDL-receptor class B 11,Repeat=LDL-receptor class B 12,Domain=EGF-like 7;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Repeat=LDL-receptor class B 13,Repeat=LDL-receptor class B 14,Repeat=LDL-receptor class B 15,Repeat=LDL-receptor class B 16,Domain=EGF-like 8;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Repeat=LDL-receptor class B 17,Repeat=LDL-receptor class B 28,Repeat=LDL-receptor class B 19,Repeat=LDL-receptor class B 20,Domain=EGF-like 9;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Repeat=LDL-receptor class B 21,Repeat=LDL-receptor class B 22,Repeat=LDL-receptor class B 23,Repeat=LDL-receptor class B 24,Repeat=LDL-receptor class B 25,Domain=EGF-like 10;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=LDL-receptor class A 11;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=LDL-receptor class A 12;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=LDL-receptor class A 13;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=LDL-receptor class A 14;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=LDL-receptor class A 15;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=LDL-receptor class A 16;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=LDL-receptor class A 17;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=LDL-receptor class A 18;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=LDL-receptor class A 19;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=LDL-receptor class A 20;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=EGF-like 11;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 12%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Repeat=LDL-receptor class B 26,Repeat=LDL-receptor class B 27,Repeat=LDL-receptor class B 28,Repeat=LDL-receptor class B 29,Repeat=LDL-receptor class B 30,Domain=EGF-like 13;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=LDL-receptor class A 21;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=LDL-receptor class A 22;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=LDL-receptor class A 23;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=LDL-receptor class A 24;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=LDL-receptor class A 25;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=LDL-receptor class A 26;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=LDL-receptor class A 27;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=LDL-receptor class A 28;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=LDL-receptor class A 29;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=LDL-receptor class A 30;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=LDL-receptor class A 31;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=LDL-receptor class A 32;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00124,Domain=EGF-like 14;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 15;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Repeat=LDL-receptor class B 31,Repeat=LDL-receptor class B 32,Repeat=LDL-receptor class B 33,Repeat=LDL-receptor class B 34,Domain=EGF-like 16;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 17;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 18;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 19;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 20;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 21;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 22;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,:ENST00000389484, 	NO_DOMAIN:ENST00000394318,ENST00000394316,ENST00000444911,ENST00000315392, 	NO_DOMAIN:ENST00000394318,ENST00000394316,ENST00000444911, Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,:ENST00000315392, 
0.0002	4180	SRR064286	chimerascan	4	0	1	1	147931724	147931980	145004781	145005286	-	+	FLJ39739	BC065231	147931724	145004781	uc001eqn.2|uc009wjz.1|uc009wjy.1|uc001eql.2|	uc001emi.3|	breast_cancer	SRR064286,SRR064437,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	4181	SRR064286	chimerascan	4	0	1	1	144340526	144340773	145004781	145005286	-	+	LOC728855	BC065231	144340526	145004781	uc001ekr.3|uc001ekt.3|	uc001emi.3|	breast_cancer	SRR064286,SRR064437,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	4182	SRR064286	chimerascan	4	0	1	1	143744201	143744587	145004781	145005286	-	+	FLJ39739	BC065231	143744201	145004781	uc001ejr.3|uc001ejp.3|uc009why.2|	uc001emi.3|	breast_cancer	SRR064286,SRR064437,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	4183	SRR064286	chimerascan	4	0	6	15	33367540	33368371	41709302	41775760	+	+	BC146941	RTF1	33368371	41709302	uc011drg.1|	uc001zny.2|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE																
0.0002	4184	SRR064286	chimerascan	4	0	M	M	12338	14645	1709	4262	+	+	MTND5	TVAS5	14645	1709	uc004cox.3|	uc004cos.3|	breast_cancer	SRR064286,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,	NO_KINASE																
0.0002	4185	SRR064286	chimerascan	4	0	6_ssto_hap7	15	4847760	4848591	41709302	41775760	+	+	BC146941	RTF1	4848591	41709302	uc011juy.1|	uc001zny.2|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE																
0.0002	4186	SRR064286	chimerascan	4	0	1	1	149576453	149576700	145004781	145005286	+	+	BC110832,LOC728855	BC065231	149576700	145004781	uc001esk.3|uc009wld.2|uc009wlb.1|uc001esl.3|	uc001emi.3|	breast_cancer	SRR064286,SRR064437,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	4187	SRR064286	chimerascan	4	0	6_qbl_hap6	15	4599758	4600589	41709302	41775760	+	+	BC146941	RTF1	4600589	41709302	uc011jbh.1|	uc001zny.2|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE																
0.0005	4188	SRR064286	chimerascan	4	0	11	11	61560150	61560500	61605250	61634825	+	+	FEN1	FADS2	61560500	61605250	uc001nsg.2|	uc001nsk.2|uc001nsl.1|uc010rlo.1|uc001nsj.2|	breast_cancer	SRR064286,SRR064439,	breast_cancer,	NO_KINASE	ENST00000305885,	ENST00000257261,	FrameShift 	-1:ENST00000305885, 	-1:ENST00000305885, 	-1:ENST00000257261, 	-1:ENST00000257261, 	MRAAV*:ENST00000305885-ENST00000257261, 	Intron:ENST00000305885, 	2:ENST00000257261, 	5UTR:ENST00000305885, 	CDS:ENST00000257261, 	DOMAIN_UNK:ENST00000305885, 	DOMAIN_UNK:ENST00000305885, 	NO_DOMAIN:ENST00000257261, 	Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Lumenal;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Lumenal;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=Cytochrome b5 heme-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00279,:ENST00000257261, 
0.9943	4189	SRR064286	chimerascan	3	2	12	12	120628101	120632513	120779133	120785317	-	-	GCN1L1	MSI1	120628101	120785317	uc001txo.2|uc001txo.2|	uc001tye.1|uc001tye.1|uc001tye.1|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000300648,	ENST00000257552,	InFrame 	1:ENST00000300648, 	40:ENST00000300648, 	264:ENST00000257552, 	362:ENST00000257552, 	MAADTQVSETLKRFAGKVTTASVKERREILSELGKCVAGKAIPLTAYGPMAAAAAAAAVVRGTGSHPWTMAPPPGSTPSRTGGFLGTTSPGPMAELYGAANQDSGVSSYISAASPAPSTGFGHSLGGPLIATAFTNGYH:ENST00000300648-ENST00000257552, 	2:ENST00000300648, 	Intron:ENST00000257552, 	CDS:ENST00000300648, 	CDS:ENST00000257552, 	NO_DOMAIN:ENST00000300648, 	Repeat=HEAT 1;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 2;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 3;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 4;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 5;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 6;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 7;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 8;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 9;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 10;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 11;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 12;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 13;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 14;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 15;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 16;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 17;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 18;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 19;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 20;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 21;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 22;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 23;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 24;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 25;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 26;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 27;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 28;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 29;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 30;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 31;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 32;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 33;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 34;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 35;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 36;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 37;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 38;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 39;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 40;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 41;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 42;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 43;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 44;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 45;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 46;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 47%3B degenerate;Ontology_term=ECO:0000255;evidence=ECO:0000255,:ENST00000300648, 	NO_DOMAIN:ENST00000257552, 	Domain=RRM 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00176,Domain=RRM 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00176,:ENST00000257552, 
0.3688	4190	SRR064286	chimerascan	3	1	19	19	11071598	11097269	11015627	11033447	+	+	SMARCA4	CARM1	11097269	11015627	uc002mqe.2|uc002mqj.3|uc002mqf.3|uc010dxp.2|uc010dxr.2|uc010dxs.2|uc010dxo.2|uc002mqg.1|uc010dxq.2|	uc010dxn.2|uc002mpz.2|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000450717,ENST00000358026,ENST00000344626,ENST00000413806,ENST00000444061,ENST00000429416,ENST00000421844,	ENST00000327064,	InFrame 	1:ENST00000450717,ENST00000358026,ENST00000344626,ENST00000413806,ENST00000444061,ENST00000429416,ENST00000421844, 	253:ENST00000450717,ENST00000358026,ENST00000344626,ENST00000413806,ENST00000444061,ENST00000429416,ENST00000421844, 	74:ENST00000327064, 	608:ENST00000327064, 	MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGEDVCVFKCSVSRETECSRVGKQSFIITLGCNSVLIQFATPNDFCSFYNILKTCRGHTLERSVFSERTEESSAVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAAVDEYFRQPVVDTFDIRILMAKSVKYTVNFLEAKEGDLHRIEIPFKFHMLHSGLVHGLAFWFDVAFIGSIMTVWLSTAPTEPLTHWYQVRCLFQSPLFAKAGDTLSGTCLLIANKRQSYDISIVAQVDQTGSKSSNLLDLKNPFFRYTGTTPSPPPGSHYTSPSENMWNTGSTYNLSSGMAVAGMPTAYDLSSVIASGSSVGHNNLIPLANTGIVNHTHSRMGSIMSTGIVQGSSGAQGSGGGSTSAHYAVNSQFTMGGPAISMASPMSIPTNTMHYGS:ENST00000421844-ENST00000327064,ENST00000358026-ENST00000327064,ENST00000450717-ENST00000327064,ENST00000413806-ENST00000327064,ENST00000344626-ENST00000327064,ENST00000444061-ENST00000327064,ENST00000429416-ENST00000327064, 	Intron:ENST00000450717,ENST00000358026,ENST00000344626,ENST00000413806,ENST00000444061,ENST00000429416,ENST00000421844, 	2:ENST00000327064, 	CDS:ENST00000450717,ENST00000358026,ENST00000344626,ENST00000413806,ENST00000444061,ENST00000429416,ENST00000421844, 	CDS:ENST00000327064, 	Domain=QLQ;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01001,Region=Necessary for interaction with SS18L1/CREST;Ontology_term=ECO:0000250;evidence=ECO:0000250,:ENST00000344626,ENST00000444061,ENST00000429416, Domain=QLQ;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS51666,:ENST00000450717,ENST00000413806, NO_DOMAIN:ENST00000358026,ENST00000421844, 	Domain=HSA;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00549,Domain=Helicase ATP-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00541,Domain=Helicase C-terminal;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00542,Domain=Bromo;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00035,:ENST00000344626,ENST00000444061,ENST00000429416, Domain=HSA;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS51204,Domain=Helicase ATP-binding;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS51192,Domain=Helicase C-terminal;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS51194,Domain=Bromo;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50014,:ENST00000450717,ENST00000413806, NO_DOMAIN:ENST00000358026,ENST00000421844, 	Domain=SAM-dependent MTase PRMT-type;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01015,Region=Transactivation domain;Ontology_term=ECO:0000250;evidence=ECO:0000250,:ENST00000327064, 	NO_DOMAIN:ENST00000327064, 
0.9841	4191	SRR064286	chimerascan	3	1	19	19	17186591	17213367	17881234	17899377	+	+	MYO9B	FCHO1	17213367	17881234	uc002nfi.2|uc010eak.2|uc002nfj.1|	uc010ebb.2|uc010xpw.1|uc002nhg.3|uc002nhh.2|uc010ebc.1|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000397274,ENST00000319396,	ENST00000389133,ENST00000252771,	InFrame 	1:ENST00000397274,ENST00000319396, 	280:ENST00000397274,ENST00000319396, 	113:ENST00000389133,ENST00000252771, 	889:ENST00000389133,ENST00000252771, 	MSVKEAGSSGRREQAAYHLHIYPQLSTTESQASCRVTATKDSTTSDVIKDAIASLRLDGTKCYVLVEVKESGGEEWVLDANDSPVHRVLLWPRRAQDEHPQEDGYYFLLQERNADGTIKYVHMQLVAQATATRRLVERGLLPRQQADFDDLCNLPELTEGNLLKNLKHRFLQQKIYTYAGSILVAINPFKFLPIYNPKYVKMYENQQLGKLEPHVFALADVAYYTMLRKRVNQCIVISGESGSGKTQSTNFLIHCLTALSQKGYASGVERTILGAGPVLEGKEEVVSTLDAVQVLSGVSQLLPKSRENYLNRCMDQERLRRESTSQKEMDKAETKTKKAAESLRRSVEKYNSARADFEQKMLDSALRFQAMEETHLRHMKALLGSYAHSVEDTHVQIGQVHEEFKQNIENVSVEMLLRKFAESKGTGREKPGPLDFEAYSAAALQEAMKRLRGAKAFRLPGLSRREREPEPPAAVDFLEPDSGTCPEVDEEGFTVRPDVTQNSTAEPSRFSSSDSDFDDEEPRKFYVHIKPAPARAPACSPEAAAAQLRATAGSLILPPGPGGTMKRHSSRDAAGKPQRPRSAPRTSSCAERLQSEEQVSKNLFGPPLESAFDHEDFTGSSSLGFTSSPSPFSSSSPENVEDSGLDSPSHAAPGPSPDSWVPRPGTPQSPPSCRAPPPEARGIRAPPLPDSPQPLASSPGPWGLEALAGGDLMPAPADPTAREGLAAPPRRLRSRKVSCPLTRSNGDLSRSLSPSPLGSSAASTALERPSFLSQTGHGVSRGPSPVVLGSQDALPIATAFTEYVHAYFRGHSPSCLARVTGELTMTFPAGIVRVFSGTPPPPVLSFRLVHTTAIEHFQPNADLLFSDPSQSDPETKDFWLNMAALTEALQRQAEQNPTASYYNVVLLRYQFSRPGPQSVPLQLSAHWQCGATLTQVSVEYGYRPGATAVPTPLTNVQILLPVGEPVTNVRLQPAATWNLEEKRLTWRLPDVSEAGGSGRLSASWEPLSGPSTPSPVAAQFTSEGTTLSGVDLELVGSGYRMSLVKRRFATGMYLVSC:ENST00000319396-ENST00000252771,ENST00000319396-ENST00000389133,ENST00000397274-ENST00000252771,ENST00000397274-ENST00000389133, 	Intron:ENST00000397274,ENST00000319396, 	6:ENST00000389133, 5:ENST00000252771, 	CDS:ENST00000397274,ENST00000319396, 	CDS:ENST00000389133,ENST00000252771, 	Domain=Ras-associating;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00166,Domain=Myosin motor,:ENST00000397274, NO_DOMAIN:ENST00000319396, 	Domain=IQ 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=IQ 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=IQ 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=IQ 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=Rho-GAP;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00172,Region=Actin-binding;Ontology_term=ECO:0000305;evidence=ECO:0000305,Region=Neck or regulatory domain;Ontology_term=ECO:0000305;evidence=ECO:0000305,Region=Tail;Ontology_term=ECO:0000305;evidence=ECO:0000305,Region=Interaction with RHOA;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:26529257;Dbxref=PMID:26529257,:ENST00000397274, NO_DOMAIN:ENST00000319396, 	Domain=F-BAR;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01077,Domain=MHD;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00404,Region=Mediates membrane-binding,Region=Mediates interaction with the adaptor protein complex AP-2,Region=Mediates interaction with AGFG1%2C CALM%2C DAB2%2C EPS15%2C EPS15R%2C ITSN1 and clathrin,:ENST00000252771, NO_DOMAIN:ENST00000389133, 	NO_DOMAIN:ENST00000389133,ENST00000252771, 
0.2361	4192	SRR064286	chimerascan	3	1	9	9	139685777	139686810	139693554	139702192	+	+	TMEM141	KIAA1984	139686810	139693554	uc004cje.3|	uc004cjf.2|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000290079,	ENST00000338005,	InFrame 	1:ENST00000290079, 	104:ENST00000290079, 	24:ENST00000338005, 	534:ENST00000338005, 	MVNLGLSRVDDAVAAKHPGLGEYAACQSHAFMKGVFTFVTGTGMAFGLQMFIQRKFPYPLQWSLLVAVVAGSVVSYGVTRVESEKCNNLWLFLETGQLPKDRSTGQCRALQIQGVKENMDQNKATLALLRSNIRRGAQDWALAKKYDQWTISKACGKNLPLRLAHCRSTMEVVREKLRKYVFDRVNMHNLLIHLVRRRGQKLESMQLELDSLRSQPDASKEELRLLQIIRQLENNIEKTMIKIITSQNIHLLYLDLLDYLKTVLAGYPIELDKLQNLVVNYCSELSDMKIMSQDAMMITDEVKRNMRQREASFIEERRARENRLNQQKKLIDKIHTKETSEKYRRGQMDLDFPSNLMSTETLKLRRKETSTAEMEYQSGVTAVVEKVKSAVRCSHVWDITSRFLAQRNTEENLELQMEDCEEWRVQLKALVKQLELEEAVLKFRQKPSSISFKSVEKKMTDMLKEEEERLQLAHSNMTKGQELLLTIQMGIDNLYVRLMGINLPATQREVVLSNTLDLNSKLAYCEGKLTYLADRVQMVSRTEEGDTKVRDTLESSTLMEKYNTRISFENREEDMIDTFQFPDMDHSYVPSRAEIKRQAQRLIEGKLKAAKKKKK:ENST00000290079-ENST00000338005, 	Intron:ENST00000290079, 	2:ENST00000338005, 	CDS:ENST00000290079, 	CDS:ENST00000338005, 	NO_DOMAIN:ENST00000290079, 	NO_DOMAIN:ENST00000290079, 	NO_DOMAIN:ENST00000338005, 	NO_DOMAIN:ENST00000338005, 
0.0002	4193	SRR064286	chimerascan	4	0	20	2	30946153	30954269	25962253	26068432	+	-	ASXL1,ASXH1	ASXL2	30954269	26068432	uc002wxs.2|uc002wxr.1|	uc002rgs.2|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000358956,	ENST00000435504,	FrameShift 	1:ENST00000358956, 	47:ENST00000358956, 	-1:ENST00000435504, 	-1:ENST00000435504, 	MKDKQKKKKERTWAEAARLVLENYSDAPMTPKQILQVIEAEGLKEMRGLRKIPQYTHES*:ENST00000358956-ENST00000435504, 	2:ENST00000358956, 	Intron:ENST00000435504, 	CDS:ENST00000358956, 	CDS:ENST00000435504, 	NO_DOMAIN:ENST00000358956, 	NO_DOMAIN:ENST00000358956, 	NO_DOMAIN:ENST00000435504, 	NO_DOMAIN:ENST00000435504, 
0.0002	4194	SRR064286	chimerascan	3	0	10	10	19778023	19896829	19981211	20023405	+	+	AK297683	AK297683	19896829	19981211	uc010qcq.1|	uc010qcr.1|uc010qcr.1|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE																
0.0004	4195	SRR064286	chimerascan	2	2	12	12	58166383	58166911	58176893	58191367	+	+	FAM119B	TSFM	58166911	58176893	uc001sqf.2|uc001sqg.2|	uc010sse.1|uc001sqh.2|uc001sqi.2|uc010ssf.1|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000333012,ENST00000300209,	ENST00000417094,ENST00000323833,	FrameShift 	1:ENST00000333012,ENST00000300209, 	96:ENST00000333012,ENST00000300209, 	20:ENST00000417094, -1:ENST00000323833, 	89:ENST00000417094, -1:ENST00000323833, 	MADPGPDPESESESVFPREVGLFADSYSEKSQFCFCGHVLTITQNFGSRLGVAARVWDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGILAALQGWVSSASVAPAKAHILCWAPSVCLGLQQGAPHEAAAENRLLLCKLQESSGDLWRGPQTDGVLLCGPGRRA:ENST00000300209-ENST00000417094,ENST00000333012-ENST00000417094, MADPGPDPESESESVFPREVGLFADSYSEKSQFCFCGHVLTITQNFGSRLGVAARVWDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGILAALQGWVSSASVAPAKAHILCWAPSVCLGLQQGAPHEAAAENRLLLCKLQESSGDLWRGPQTGRDLAPQGGPEGGLEQSCQAPREEDQRRPDWAVAGRKHNCISRGKL*:ENST00000300209-ENST00000323833, 	Intron:ENST00000333012,ENST00000300209, 	2:ENST00000417094,ENST00000323833, 	CDS:ENST00000333012,ENST00000300209, 	CDS:ENST00000417094,ENST00000323833, 	Region=S-adenosyl-L-methionine binding;Ontology_term=ECO:0000250;evidence=ECO:0000250,:ENST00000333012,ENST00000300209, 	NO_DOMAIN:ENST00000333012,ENST00000300209, 	NO_DOMAIN:ENST00000417094,ENST00000323833, 	NO_DOMAIN:ENST00000417094,ENST00000323833, 
0.0002	4196	SRR064286	chimerascan	2	2	1	1	147874655	147874818	144480748	144481765	+	-	AK311108	LOC728875,BC021732	147874818	144481765	uc010paa.1|	uc001ekz.3|uc001ela.3|uc001eky.3|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE																
0.0002	4197	SRR064286	chimerascan	2	2	1	1	147874655	147874818	149615765	149616784	+	+	AK311108	LOC728855	147874818	149615765	uc010paa.1|	uc001esk.3|uc001esl.3|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE																
0.0002	4198	SRR064286	chimerascan	2	2	1	1	143687146	143687309	144300514	144301536	+	-	CR610073,AK311108	LOC728855	143687309	144301536	uc001ejq.2|uc009whw.1|	uc001ekt.3|uc001eks.2|uc001ekr.3|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE																
0.0002	4199	SRR064286	chimerascan	2	2	20	20	31172372	31172875	31052584	31115716	-	-	LOC284804	C20orf112	31172372	31115716	uc002wxx.2|	uc002wxw.1|	breast_cancer	SRR064286,SRR064287,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000201961,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000201961, 	-1:ENST00000201961, 	GGRWPVGARGHLSEAGRCGGRFL*:UnSpec-ENST00000201961, 	-1:UnSpec, 	Intron:ENST00000201961, 	Intergenic:UnSpec, 	CDS:ENST00000201961, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000201961, 	DOMAIN_UNK:ENST00000201961, 
0.0002	4200	SRR064286	chimerascan	2	2	1	1	143687146	143687309	144480748	144481765	+	-	CR610073,AK311108	LOC728875,BC021732	143687309	144481765	uc001ejq.2|uc009whw.1|	uc001ekz.3|uc001ela.3|uc001eky.3|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE																
0.9466	4201	SRR064286	chimerascan	2	2	17	17	65821780	65909303	65548373	65689645	+	+	BPTF	PITPNC1	65909303	65548373	uc002jgf.2|uc002jge.2|	uc002jgc.2|uc002jgb.2|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000306378,ENST00000321892,ENST00000335221,	ENST00000335257,ENST00000299954,	InFrame 	1:ENST00000306378,ENST00000321892,ENST00000335221, 	1768:ENST00000306378, 1894:ENST00000321892,ENST00000335221, 	57:ENST00000335257, 66:ENST00000299954, 	323:ENST00000335257, 266:ENST00000299954, 	MRGRRGRPPKQPAAPAAERCAPAPPPPPPPPTSGPIGGLRSRHRGSSRGRWAAAQAEVAPKTRLSSPRGGSSSRRKPPPPPPAPPSTSAPGRGGRGGGGGRTGGGGGGGHLARTTAARRAVNKVVYDDHESEEEEEEEDMVSEEEEEEDGDAEETQDSEDDEEDEMEEDDDDSDYPEEMEDDDDDASYCTESSFRSHSTYSSTPGRRKPRVHRPRSPILEEKDIPPLEFPKSSEDLMVPNEHIMNVIAIYEVLRNFGTVLRLSPFRFEDFCAALVSQEQCTLMAEMHVVLLKAVLREEDTSNTTFGPADLKDSVNSTLYFIDGMTWPEVLRVYCESDKEYHHVLPYQEAEDYPYGPVENKIKVLQFLVDQFLTTNIAREELMSEGVIQYDDHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEIQKNKPYIRHEPIGYDRSRRKYWFLNRRLIIEEDTENENEKKIWYYSTKVQLAELIDCLDKDYWEAELCKILEEMREEIHRHMDITEDLTNKARGSNKSFLAAANEEILESIRAKKGDIDNVKSPEETEKDKNETENDSKDAEKNREEFEDQSLEKDSDDKTPDDDPEQGKSEEPTEVGDKGNSVSANLGDNTTNATSEETSPSEGRSPVGCLSETPDSSNMAEKKVASELPQDVPEEPNKTCESSNTSATTTSIQPNLENSNSSSELNSSQSESAKAADDPENGERESHTPVSIQEEIVGDFKSEKSNGELSESPGAGKGASGSTRIITRLRNPDSKLSQLKSQQVAAAAHEANKLFKEGKEVLVVNSQGEISRLSTKKEVIMKGNINNYFKLGQEGKYRVYHNQYSTNSFALNKHQHREDHDKRRHLAHKFCLTPAGEFKWNGSVHGSKVLTISTLRLTITQLENNIPSSFLHPNWASHRANWIKAVQMCSKPREFALALAILECAVKPVVMLPIWRESLGHTRLHRMTSIEREEKEKVKKKEKKQEEEETMQQATWVKYTFPVKHQVWKQKGEEYRVTGYGGWSWISKTHVYRFVPKLPGNTNVNYRKSLEGTKNNMDENMDESDKRKCSRSPKKIKIEPDSEKDEVKGSDAAKGADQNEMDISKITEKKDQDVKELLDSDSDKPCKEEPMEVDDDMKTESHVNCQESSQVDVVNVSEGFHLRTSYKKKTKSSKLDGLLERRIKQFTLEEKQRLEKIKLEGGIKGIGKTSTNSSKNLSESPVITKAKEGCQSDSMRQEQSPNANNDQPEDLIQGCSESDSSVLRMSDPSHTTNKLYPKDRVLDDVSIRSPETKCPKQNSIENDIEEKVSDLASRGQEPSKSKTKGNDFFIDDSKLASADDIGTLICKNKKPLIQEESDTIVSSSKSALHSSVPKSTNDRDATPLSRAMDFEGKLGCDSESNSTLENSSDTVSIQDSSEEDMIVQNSNESISEQFRTREQDVEVLEPLKCELVSGESTGNCEDRLPVKGTEANGKKPSQQKKLEERPVNKCSDQIKLKNTTDKKNNENRESEKKGQRTSTFQINGKDNKPKIYLKGECLKEISESRVVSGNVEPKVNNINKIIPENDIKSLTVKESAIRPFINGDVIMEDFNERNSSETKSHLLSSSDAEGNYRDSLETLPSTKESDSTQTTTPSASCPESNSVNQVEDMEIETSEVKKVTSSPITSEEESNLSNDFIDENGLPINKNENVNGESKRKTVITEVTTMTSTVATESKTVIKVEKGDKQTVVSSTENCAKSTVTTTTTTVTKLSTPSTGGSVDIISVKEQSKTVVTTTVTDSLTTTGGTLVTSMTVSKEYSTRDKVKLMKFSRPKKTRSGTALPSYRKFVTKSSKKSIFVLPNDDLKKLARKGGIREVPYFNYNAKPALDIWPYPSPRPTFGITWRKLPSWARAVVPKIFYVTEKAWNYYPYTITEYTCSFLPKFSIHIETKYEDNKGSNDTIFDNEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPIMCSYKLVTVKFEVWGLQTRVEQFVHKVVRDILLIGHRQAFAWVDEWYDMTMDEVREFERATQEATNKKIGIFPPAISISSIPLLPSSVRSAPSSAPSTPLSTDAPEFLSVPKDRPRKKSAPETLTLPDPEKKATLNLPGMHSSDKPCRPKSE:ENST00000335221-ENST00000335257,ENST00000321892-ENST00000335257, MRGRRGRPPKQPAAPAAERCAPAPPPPPPPPTSGPIGGLRSRHRGSSRGRWAAAQAEVAPKTRLSSPRGGSSSRRKPPPPPPAPPSTSAPGRGGRGGGGGRTGGGGGGGHLARTTAARRAVNKVVYDDHESEEEEEEEDMVSEEEEEEDGDAEETQDSEDDEEDEMEEDDDDSDYPEEMEDDDDDASYCTESSFRSHSTYSSTPGRRKPRVHRPRSPILEEKDIPPLEFPKSSEDLMVPNEHIMNVIAIYEVLRNFGTVLRLSPFRFEDFCAALVSQEQCTLMAEMHVVLLKAVLREEDTSNTTFGPADLKDSVNSTLYFIDGMTWPEVLRVYCESDKEYHHVLPYQEAEDYPYGPVENKIKVLQFLVDQFLTTNIAREELMSEGVIQYDDHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEIQKNKPYIRHEPIGYDRSRRKYWFLNRRLIIEEDTENENEKKIWYYSTKVQLAELIDCLDKDYWEAELCKILEEMREEIHRHMDITEDLTNKARGSNKSFLAAANEEILESIRAKKGDIDNVKSPEETEKDKNETENDSKDAEKNREEFEDQSLEKDSDDKTPDDDPEQGKSEVGDFKSEKSNGELSESPGAGKGASGSTRIITRLRNPDSKLSQLKSQQVAAAAHEANKLFKEGKEVLVVNSQGEISRLSTKKEVIMKGNINNYFKLGQEGKYRVYHNQYSTNSFALNKHQHREDHDKRRHLAHKFCLTPAGEFKWNGSVHGSKVLTISTLRLTITQLENNIPSSFLHPNWASHRANWIKAVQMCSKPREFALALAILECAVKPVVMLPIWRESLGHTRLHRMTSIEREEKEKVKKKEKKQEEEETMQQATWVKYTFPVKHQVWKQKGEEYRVTGYGGWSWISKTHVYRFVPKLPGNTNVNYRKSLEGTKNNMDENMDESDKRKCSRSPKKIKIEPDSEKDEVKGSDAAKGADQNEMDISKITEKKDQDVKELLDSDSDKPCKEEPMEVDDDMKTESHVNCQESSQVDVVNVSEGFHLRTSYKKKTKSSKLDGLLERRIKQFTLEEKQRLEKIKLEGGIKGIGKTSTNSSKNLSESPVITKAKEGCQSDSMRQEQSPNANNDQPEDLIQGCSESDSSVLRMSDPSHTTNKLYPKDRVLDDVSIRSPETKCPKQNSIENDIEEKVSDLASRGQEPSKSKTKGNDFFIDDSKLASADDIGTLICKNKKPLIQEESDTIVSSSKSALHSSVPKSTNDRDATPLSRAMDFEGKLGCDSESNSTLENSSDTVSIQDSSEEDMIVQNSNESISEQFRTREQDVEVLEPLKCELVSGESTGNCEDRLPVKGTEANGKKPSQQKKLEERPVNKCSDQIKLKNTTDKKNNENRESEKKGQRTSTFQINGKDNKPKIYLKGECLKEISESRVVSGNVEPKVNNINKIIPENDIKSLTVKESAIRPFINGDVIMEDFNERNSSETKSHLLSSSDAEGNYRDSLETLPSTKESDSTQTTTPSASCPESNSVNQVEDMEIETSEVKKVTSSPITSEEESNLSNDFIDENGLPINKNENVNGESKRKTVITEVTTMTSTVATESKTVIKVEKGDKQTVVSSTENCAKSTVTTTTTTVTKLSTPSTGGSVDIISVKEQSKTVVTTTVTDSLTTTGGTLVTSMTVSKEYSTRDKVKLMKFSRPKKTRSGTALPSYRKFVTKSSKKSIFVLPNDDLKKLARKGGIREVPYFNYNAKPALDIWPYPSPRPTFGITWRKLPSWARAVVPKIFYVTEKAWNYYPYTITEYTCSFLPKFSIHIETKYEDNKGSNDTIFDNEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPIMCSYKLVTVKFEVWGLQTRVEQFVHKVVRDILLIGHRQAFAWVDEWYDMTMDEVREFERATQEATNKKIGIFPPAISISSIPLLPSSVRSAPSSAPSTPLSTDAPEFLSVPKDRPRKKSAPETLTLPDPEKKATLNLPGMHSSDKPCRPKSE:ENST00000306378-ENST00000335257, MRGRRGRPPKQPAAPAAERCAPAPPPPPPPPTSGPIGGLRSRHRGSSRGRWAAAQAEVAPKTRLSSPRGGSSSRRKPPPPPPAPPSTSAPGRGGRGGGGGRTGGGGGGGHLARTTAARRAVNKVVYDDHESEEEEEEEDMVSEEEEEEDGDAEETQDSEDDEEDEMEEDDDDSDYPEEMEDDDDDASYCTESSFRSHSTYSSTPGRRKPRVHRPRSPILEEKDIPPLEFPKSSEDLMVPNEHIMNVIAIYEVLRNFGTVLRLSPFRFEDFCAALVSQEQCTLMAEMHVVLLKAVLREEDTSNTTFGPADLKDSVNSTLYFIDGMTWPEVLRVYCESDKEYHHVLPYQEAEDYPYGPVENKIKVLQFLVDQFLTTNIAREELMSEGVIQYDDHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEIQKNKPYIRHEPIGYDRSRRKYWFLNRRLIIEEDTENENEKKIWYYSTKVQLAELIDCLDKDYWEAELCKILEEMREEIHRHMDITEDLTNKARGSNKSFLAAANEEILESIRAKKGDIDNVKSPEETEKDKNETENDSKDAEKNREEFEDQSLEKDSDDKTPDDDPEQGKSEVGDFKSEKSNGELSESPGAGKGASGSTRIITRLRNPDSKLSQLKSQQVAAAAHEANKLFKEGKEVLVVNSQGEISRLSTKKEVIMKGNINNYFKLGQEGKYRVYHNQYSTNSFALNKHQHREDHDKRRHLAHKFCLTPAGEFKWNGSVHGSKVLTISTLRLTITQLENNIPSSFLHPNWASHRANWIKAVQMCSKPREFALALAILECAVKPVVMLPIWRESLGHTRLHRMTSIEREEKEKVKKKEKKQEEEETMQQATWVKYTFPVKHQVWKQKGEEYRVTGYGGWSWISKTHVYRFVPKLPGNTNVNYRKSLEGTKNNMDENMDESDKRKCSRSPKKIKIEPDSEKDEVKGSDAAKGADQNEMDISKITEKKDQDVKELLDSDSDKPCKEEPMEVDDDMKTESHVNCQESSQVDVVNVSEGFHLRTSYKKKTKSSKLDGLLERRIKQFTLEEKQRLEKIKLEGGIKGIGKTSTNSSKNLSESPVITKAKEGCQSDSMRQEQSPNANNDQPEDLIQGCSESDSSVLRMSDPSHTTNKLYPKDRVLDDVSIRSPETKCPKQNSIENDIEEKVSDLASRGQEPSKSKTKGNDFFIDDSKLASADDIGTLICKNKKPLIQEESDTIVSSSKSALHSSVPKSTNDRDATPLSRAMDFEGKLGCDSESNSTLENSSDTVSIQDSSEEDMIVQNSNESISEQFRTREQDVEVLEPLKCELVSGESTGNCEDRLPVKGTEANGKKPSQQKKLEERPVNKCSDQIKLKNTTDKKNNENRESEKKGQRTSTFQINGKDNKPKIYLKGECLKEISESRVVSGNVEPKVNNINKIIPENDIKSLTVKESAIRPFINGDVIMEDFNERNSSETKSHLLSSSDAEGNYRDSLETLPSTKESDSTQTTTPSASCPESNSVNQVEDMEIETSEVKKVTSSPITSEEESNLSNDFIDENGLPINKNENVNGESKRKTVITEVTTMTSTVATESKTVIKVEKGDKQTVVSSTENCAKSTVTTTTTTVTKLSTPSTGGSVDIISVKEQSKTVVTTTVTDSLTTTGGTLVTSMTVSKEYSTRDKVKLMKFSRPKKTRSGTALPSYRKFVTKSSKKSIFVLPNDDLKKLARKGGIREVPYFNYNAKPALDIWPYPSPRPTFGITWRKLPSWARAVVPKIFYVTEKAWNYYPYTITECSFLPKFSIHIETKYEDNKGSNDTIFDNEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPIMCSYKLVTVKFEVWGLQTRVEQFVHKVVRDILLIGHRQAFAWVDEWYDMTMDDVREYEKNMHEQTNIKVCNQHSSPVDDIESHAQTST:ENST00000306378-ENST00000299954, 	Intron:ENST00000306378,ENST00000321892,ENST00000335221, 	3:ENST00000335257,ENST00000299954, 	CDS:ENST00000306378,ENST00000321892,ENST00000335221, 	CDS:ENST00000335257,ENST00000299954, 	Domain=DDT;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00063,Region=Interaction with KEAP1,Region=Interaction with MAZ,:ENST00000306378,ENST00000321892, Domain=DDT;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50827,Domain=PHD-type;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50016,:ENST00000335221, 	Domain=Bromo;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00035,:ENST00000306378,ENST00000321892, NO_DOMAIN:ENST00000335221, 	NO_DOMAIN:ENST00000335257,ENST00000299954, 	NO_DOMAIN:ENST00000335257,ENST00000299954, 
0.0003	4202	SRR064286	chimerascan	2	2	11	11	65029432	65063461	65088015	65089899	+	+	POLA2	CDC42EP2	65063461	65088015	uc001odk.2|uc001odj.2|	uc001odl.2|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000265465,	ENST00000279249,	FrameShift 	1:ENST00000265465, 	549:ENST00000265465, 	-1:ENST00000279249, 	-1:ENST00000279249, 	MSASAQQLAEELQIFGLDCEEALIEKLVELCVQYGQNEEGMVGELIAFCTSTHKVGLTSEILNSFEHEFLSKRLSKARHSTCKDSGHAGARDIVSIQELIEVEEEEEILLNSYTTPSKGSQKRAISTPETPLTKRSVSTRSPHQLLSPSSFSPSATPSQKYNSRSNRGEVVTSFGLAQGVSWSGRGGAGNISLKVLGCPEALTGSYKSMFQKLPDIREVLTCKIEELGSELKEHYKIEAFTPLLAPAQEPVTLLGQIGCDSNGKLNNKSVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVIMEGINTTGRKLVATKLYEGVPLPFYQPTEEDADFEQSMVLVACGPYTTSDSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDIFKQCLRTIIEGTRSSGSHLVFVPSLRDVHHEPVYPQPPFSYSDLSREDKKQVQFVSEPCSLSINGVIFGLTSTDLLFHLGAEEISSSSGTSDRFSRILKHILTQRSYYPLYPPQEDMAIDYESFYVYAQLPVTPDVLIIPSELRYFVKVLSPGPGTSNPR*:ENST00000265465-ENST00000279249, 	Intron:ENST00000265465, 	-1:ENST00000279249, 	CDS:ENST00000265465, 	5UTR:ENST00000279249, 	DOMAIN_UNK:ENST00000265465, 	DOMAIN_UNK:ENST00000265465, 	DOMAIN_UNK:ENST00000279249, 	DOMAIN_UNK:ENST00000279249, 
0.0002	4203	SRR064286	chimerascan	2	2	1	1	147874655	147874818	144300514	144301536	+	-	AK311108	LOC728855	147874818	144301536	uc010paa.1|	uc001ekt.3|uc001eks.2|uc001ekr.3|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE																
0.0002	4204	SRR064286	chimerascan	2	2	1	1	143687146	143687309	149615765	149616784	+	+	CR610073,AK311108	LOC728855	143687309	149615765	uc001ejq.2|uc009whw.1|	uc001esk.3|uc001esl.3|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE																
0.9986	4205	SRR064286	chimerascan	2	2	20	17	60639507	60640866	59759985	59926617	-	-	TAF4	BRIP1	60639507	59926617	uc002ybs.2|	uc002izk.1|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000252996,	ENST00000259008,	InFrame 	1:ENST00000252996, 	453:ENST00000252996, 	127:ENST00000259008, 	1249:ENST00000259008, 	MAAGSDLLDEVFFNSEVDEKVVSDLVGSLESQLAASAAHHHHLAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTPTATTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPDSPEKTTLAAKLSAKKQASIYRDENDDFQVEKKRIRPLETTQQIRKRHCFGTEVHNLDAKVDSGKTVKLNSPLEKINSFSPQKPPGHCSRCCCSTKQGNSQESSNTIKKDHTGKSKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCMELLDGKNGKSCYFYHGVHKISDQHTLQTFQGMCKAWDIEELVSLGKKLKACPYYTARELIQDADIIFCPYNYLLDAQIRESMDLNLKEQVVILDEAHNIEDCARESASYSVTEVQLRFARDELDSMVNNNIRKKDHEPLRAVCCSLINWLEANAEYLVERDYESACKIWSGNEMLLTLHKMGITTATFPILQGHFSAVLQKEEKISPIYGKEEAREVPVISASTQIMLKGLFMVLDYLFRQNSRFADDYKIAIQQTYSWTNQIDISDKNGLLVLPKNKKRSRQKTAVHVLNFWCLNPAVAFSDINGKVQTIVLTSGTLSPMKSFSSELGVTFTIQLEANHIIKNSQVWVGTIGSGPKGRNLCATFQNTETFEFQDEVGALLLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGLWHNLELVKTVIVEPQGGEKTNFDELLQVYYDAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDHHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFRNNPSRYISGLSKWVRQQIQHHSTFESALESLAEFSKKHQKVLNVSIKDRTNIQDNESTLEVTSLKYSTSPYLLEAASHLSPENFVEDEAKICVQELQCPKIITKNSPLPSSIISRKEKNDPVFLEEAGKAEKIVISRSTSPTFNKQTKRVSWSSFNSLGQYFTGKIPKATPELGSSENSASSPPRFKTEKMESKTVLPFTDKCESSNLTVNTSFGSCPQSETIISSLKIDATLTRKNHSEHPLCSEEALDPDIELSLVSEEDKQSTSNRDFETEAEDESIYFTPELYDPEDTDEEKNDLAETDRGNRLANNSDCILAKDLFEIRTIKEVDSAREVKAEDCIDTKLNGILHIEESKIDDIDGNVKTTWINELELGKTHEIEIKNFKPSPSKNKGMFPGFK:ENST00000252996-ENST00000259008, 	1:ENST00000252996, 	Intron:ENST00000259008, 	CDS:ENST00000252996, 	CDS:ENST00000259008, 	NO_DOMAIN:ENST00000252996, 	Domain=TAFH;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00440,:ENST00000252996, 	Domain=Helicase ATP-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00541,Region=Interaction with BRCA1,:ENST00000259008, 	NO_DOMAIN:ENST00000259008, 
0.0002	4206	SRR064286	chimerascan	2	1	5	5	148880578	148881757	148874845	148892772	-	-	BC005905	CSNK1A1	148880578	148892772	uc003lqz.2|	uc003lqw.1|uc010jha.1|uc011dcb.1|uc003lqv.1|uc003lqx.1|uc003lqy.1|uc011dcc.1|	breast_cancer	SRR064286,	breast_cancer,	3p_KINASE	UnSpec,	ENST00000261798,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000261798, 	-1:ENST00000261798, 	VIPY*:UnSpec-ENST00000261798, 	-1:UnSpec, 	Intron:ENST00000261798, 	Intergenic:UnSpec, 	CDS:ENST00000261798, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000261798, 	DOMAIN_UNK:ENST00000261798, 
0.9425	4207	SRR064286	chimerascan	2	1	8	8	99129521	99129618	99042690	99048944	+	+	POP1	MATN2	99129618	99042690	uc003yij.3|	uc003yic.2|uc010mbj.1|uc003yid.2|uc010mbi.1|uc010mbh.1|uc003yie.1|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000401707,	ENST00000254898,	InFrame 	-1:ENST00000401707, 	-1:ENST00000401707, 	788:ENST00000254898, 	957:ENST00000254898, 	MYAVGVGKAIEEELQEIASEPTNKHLFYAEDFSTMDEISEKLKKGICEALEDSDGRQDSPAGELPKTVQQPTESEPVTINIQDLLSCSNFAVQHRYLFEEDNLLRSTQKLSHSTKPSGSPLEEKHDQCKCENLIMFQNLANEEVRKLTQRLLEEMTQRMEALENRLRYR:ENST00000401707-ENST00000254898, 	Intron:ENST00000401707, 	15:ENST00000254898, 	5UTR:ENST00000401707, 	CDS:ENST00000254898, 	DOMAIN_UNK:ENST00000401707, 	DOMAIN_UNK:ENST00000401707, 	Domain=VWFA 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00219,:ENST00000254898, 	Domain=VWFA 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00219,Domain=EGF-like 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 5;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 6;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 7;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 8;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 9;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 10;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,:ENST00000254898, 
0.5826	4208	SRR064286	chimerascan	2	1	1	1	153895209	153895451	153965170	154002530	-	-	GATAD2B	DKFZp434E2118,NUP210L	153895209	154002530	uc001fdb.3|	uc001fdw.2|uc001fdw.2|uc010peh.1|uc009woq.2|uc009woq.2|uc010peh.1|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000368655,	ENST00000271854,	InFrame 	-1:ENST00000368655, 	-1:ENST00000368655, 	207:ENST00000271854, 	699:ENST00000271854, 	MVVHTKAAGRTSIKVTVHCMNSSSGQFEGNLLELSDEVQILVFEKLQLFYPECQPEQILMPINSQLKLHTNREGAAFVSSRVLKCFPNSSVIEEDGEGLLKAGSIAGTAVLEVTSIEPFGVNQTTITGVQVAPVTYLRVSSQPKLYTAQGRTLSAFPLGMSLTFTVQFYNSIGEKFHTHNTQLYLALNRDDLLHIGPGNKNYTYMAQAVNRGLTLVGLWDRRHPGMADYIPVAVEHAIEPDTKLTFVGDIICFSTHLVSQHGEPGIWMISANNILQTDIVTGVGVARSPGTAMIFHDIPGVVKTYREVVVNASSRLMLSYDLKTYLTNTLNSTVFKLFITTGRNGVNLKGFCTPNQALAITKVLLPATLMLCHVQFSNTLLDIPASKVFQVHSDFSMEKDHCEDSAILKRFTGSYQILLLTLFAVLASTASIFLAYNAFLNKIQTVPVVYVPTLGTPQPGFFNSTSSPPHFMSLQPPLAQSRLQHWLWSIRH:ENST00000368655-ENST00000271854, 	1:ENST00000368655, 	Intron:ENST00000271854, 	5UTR:ENST00000368655, 	CDS:ENST00000271854, 	DOMAIN_UNK:ENST00000368655, 	DOMAIN_UNK:ENST00000368655, 	NO_DOMAIN:ENST00000271854, 	NO_DOMAIN:ENST00000271854, 
0.0002	4209	SRR064286	chimerascan	2	1	17	17	42275388	42275529	42431101	42433956	-	-	ATXN7L3	FAM171A2	42275388	42433956	uc002iga.2|uc002ifz.2|	uc002igs.2|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000454077,ENST00000389384,	ENST00000293443,	FrameShift 	1:ENST00000454077,ENST00000389384, 	16:ENST00000454077,ENST00000389384, 	-1:ENST00000293443, 	-1:ENST00000293443, 	MKMEEMSLSGLDNSKLEVPAPSPWCSSSAGLPACLSAPPTASSGRHLRLPAPSRKCGLSLPSWALRPPAQAMAPGWS*:ENST00000454077-ENST00000293443,ENST00000389384-ENST00000293443, 	1:ENST00000454077,ENST00000389384, 	Intron:ENST00000293443, 	CDS:ENST00000454077,ENST00000389384, 	CDS:ENST00000293443, 	NO_DOMAIN:ENST00000454077,ENST00000389384, 	Domain=SCA7;Ontology_term=ECO:0000255;evidence=ECO:0000255|HAMAP-Rule:MF_03047,:ENST00000454077,ENST00000389384, 	NO_DOMAIN:ENST00000293443, 	Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,:ENST00000293443, 
0.0002	4210	SRR064286	chimerascan	2	1	20	20	49411467	49411710	45838381	45850125	+	-	BCAS4	ZMYND8,KIAA1125	49411710	45850125	uc002xvs.2|uc002xvq.2|uc002xvr.2|uc002xvp.1|	uc002xtc.1|uc002xsy.1|uc002xtb.1|uc010zxz.1|uc002xst.1|uc002xsw.1|uc002xtf.1|uc002xsr.1|uc002xsz.1|uc010zxy.1|uc002xsu.1|uc002xsv.1|uc010ghr.1|uc010zya.1|uc002xta.1|uc010ghq.1|uc002xte.1|uc002xss.2|uc002xsx.1|uc002xtd.1|	breast_cancer	SRR064286,	breast_cancer,	3p_KINASE	ENST00000358791,ENST00000371608,ENST00000355583,ENST00000262591,	ENST00000446994,ENST00000355972,ENST00000360911,ENST00000262975,ENST00000311275,ENST00000352431,ENST00000471951,ENST00000396281,ENST00000458360,ENST00000461685,	FrameShift 	1:ENST00000358791,ENST00000371608,ENST00000355583,ENST00000262591, 	60:ENST00000358791,ENST00000371608,ENST00000355583,ENST00000262591, 	-1:ENST00000446994,ENST00000355972,ENST00000360911,ENST00000262975,ENST00000311275,ENST00000352431,ENST00000471951,ENST00000396281,ENST00000458360,ENST00000461685, 	-1:ENST00000446994,ENST00000355972,ENST00000360911,ENST00000262975,ENST00000311275,ENST00000352431,ENST00000471951,ENST00000396281,ENST00000458360,ENST00000461685, 	MQRTGGGAPRPGRNHGLPGSLRQPDPVALLMLLVDADQPEPMRSGARELALFLTPEPGAEGYCSSAGSGC*:ENST00000358791-ENST00000352431,ENST00000358791-ENST00000446994,ENST00000358791-ENST00000311275,ENST00000355583-ENST00000360911,ENST00000371608-ENST00000355972,ENST00000358791-ENST00000458360,ENST00000358791-ENST00000396281,ENST00000355583-ENST00000471951,ENST00000371608-ENST00000461685,ENST00000262591-ENST00000471951,ENST00000262591-ENST00000360911,ENST00000358791-ENST00000360911,ENST00000355583-ENST00000262975,ENST00000371608-ENST00000396281,ENST00000371608-ENST00000458360,ENST00000262591-ENST00000446994,ENST00000355583-ENST00000311275,ENST00000262591-ENST00000458360,ENST00000355583-ENST00000355972,ENST00000371608-ENST00000262975,ENST00000358791-ENST00000471951,ENST00000355583-ENST00000352431,ENST00000358791-ENST00000262975,ENST00000262591-ENST00000355972,ENST00000262591-ENST00000262975,ENST00000262591-ENST00000461685,ENST00000262591-ENST00000396281,ENST00000355583-ENST00000458360,ENST00000355583-ENST00000461685,ENST00000262591-ENST00000352431,ENST00000371608-ENST00000360911,ENST00000371608-ENST00000446994,ENST00000371608-ENST00000352431,ENST00000358791-ENST00000355972,ENST00000358791-ENST00000461685,ENST00000355583-ENST00000396281,ENST00000371608-ENST00000471951,ENST00000355583-ENST00000446994,ENST00000371608-ENST00000311275,ENST00000262591-ENST00000311275, 	Intron:ENST00000358791,ENST00000371608,ENST00000355583,ENST00000262591, 	Intron:ENST00000446994,ENST00000355972,ENST00000360911,ENST00000262975,ENST00000311275,ENST00000352431,ENST00000471951,ENST00000396281,ENST00000458360,ENST00000461685, 	CDS:ENST00000358791,ENST00000371608,ENST00000355583,ENST00000262591, 	CDS:ENST00000446994,ENST00000355972,ENST00000360911,ENST00000262975,ENST00000311275,ENST00000352431,ENST00000471951,ENST00000396281,ENST00000458360,ENST00000461685, 	NO_DOMAIN:ENST00000358791,ENST00000371608,ENST00000355583,ENST00000262591, 	NO_DOMAIN:ENST00000358791,ENST00000371608,ENST00000355583,ENST00000262591, 	NO_DOMAIN:ENST00000446994,ENST00000355972,ENST00000360911,ENST00000262975,ENST00000311275,ENST00000352431,ENST00000471951,ENST00000396281,ENST00000458360,ENST00000461685, 	Domain=Bromo;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00035,Domain=PWWP;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00162,Region=Interacts with PRKCB1,:ENST00000446994,ENST00000355972,ENST00000360911,ENST00000262975,ENST00000311275,ENST00000352431,ENST00000471951,ENST00000396281,ENST00000458360,ENST00000461685, NO_DOMAIN:ENST00000471951, 
0.0002	4211	SRR064286	chimerascan	3	0	7	7	77325213	77326662	77313168	77314643	-	-	BC037783	AF290475	77325213	77314643	uc003ugj.1|	uc003ugk.3|	breast_cancer	SRR064286,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,	NO_KINASE																
0.0002	4212	SRR064286	chimerascan	2	0	19	6	40477073	40477145	74225475	74227657	+	-	PSMC4	EEF1A2	40477145	74227657	uc002omq.2|uc002omr.2|	uc003phg.2|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000157812,	UnSpec,	UnSpec 	1:ENST00000157812, 	12:ENST00000157812, 	-1:UnSpec, 	-1:UnSpec, 	MEEIGILVEKAQ:ENST00000157812-UnSpec, 	Intron:ENST00000157812, 	-1:UnSpec, 	CDS:ENST00000157812, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000157812, 	DOMAIN_UNK:ENST00000157812, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4213	SRR064286	chimerascan	2	0	15	15	68521840	68522080	68483044	68489966	-	-	CLN6	DKFZp686A09136,CALML4	68521840	68489966	uc010ujy.1|uc002arf.2|	uc002ard.2|uc002arc.2|uc002arb.2|uc002are.2|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000249806,	ENST00000395465,ENST00000354678,ENST00000467889,	FrameShift 	1:ENST00000249806, 	27:ENST00000249806, 	-1:ENST00000395465,ENST00000354678,ENST00000467889, 	-1:ENST00000395465,ENST00000354678,ENST00000467889, 	MEATRRRQHLGATGGPGAQLGASFLQARRKWRAGFLHFSDHYAHANKTRRPKERNSSSHVDGGQGEERLRHGVRPAVKTHESGGEAHPQGR*:ENST00000249806-ENST00000395465, MEATRRRQHLGATGGPGAQLGASFLQARRKWRAGFLHFSDHYAHANKTRRPKERNSSSHVDGGQGEERLRHGVRPAVKTHESGGEAHPQGSG*:ENST00000249806-ENST00000467889,ENST00000249806-ENST00000354678, 	1:ENST00000249806, 	Intron:ENST00000395465,ENST00000354678,ENST00000467889, 	CDS:ENST00000249806, 	CDS:ENST00000395465,ENST00000354678,ENST00000467889, 	NO_DOMAIN:ENST00000249806, 	NO_DOMAIN:ENST00000249806, 	NO_DOMAIN:ENST00000395465,ENST00000354678,ENST00000467889, 	Domain=EF-hand 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00448,Domain=EF-hand 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00448,Domain=EF-hand 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00448,Domain=EF-hand 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00448,:ENST00000395465,ENST00000467889, Domain=EF-hand;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50222,Domain=EF-hand;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50222,:ENST00000354678, 
0.0348	4214	SRR064286	chimerascan	2	0	20	8	35973088	36033819	11679259	11696817	+	+	SRC	FDFT1	36033819	11679259	uc002xgy.2|uc002xgx.2|	uc011kxj.1|uc010lsb.2|uc010lsa.1|uc011kxk.1|uc003wui.2|uc003wuj.2|uc003wuk.2|uc011kxi.1|uc011kxh.1|uc003wuh.2|uc011kxe.1|	breast_cancer	SRR064286,SRR064438,	breast_cancer,	5p_KINASE	ENST00000373558,	ENST00000220584,	InFrame 	1:ENST00000373558, 	542:ENST00000373558, 	-1:ENST00000220584, 	-1:ENST00000220584, 	MGSNKSKPKDASQRRRSLEPAENVHGAGGGAFPASQTPSKPASADGHRGPSAAFAPAAAEPKLFGGFNSSDTVTSPQRAGPLAGGVTTFVALYDYESRTETDLSFKKGERLQIVNNTRKVDVREGDWWLAHSLSTGQTGYIPSNYVAPSDSIQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGENL:ENST00000373558-ENST00000220584, 	Intron:ENST00000373558, 	Intron:ENST00000220584, 	3UTR:ENST00000373558, 	CDS:ENST00000220584, 	Domain=SH3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00192,Domain=SH2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00191,Domain=Protein kinase;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00159,:ENST00000373558, 	NO_DOMAIN:ENST00000373558, 	DOMAIN_UNK:ENST00000220584, 	DOMAIN_UNK:ENST00000220584, 
0.0002	4215	SRR064286	chimerascan	2	0	19	17	18654296	18654383	57970443	58027784	-	+	FKBP8	RPS6KB1	18654296	57970443	uc002njk.1|uc002njj.1|	uc002ixy.2|uc010won.1|uc010ddj.1|uc010wom.1|	breast_cancer	SRR064286,	breast_cancer,	3p_KINASE																
0.0003	4216	SRR064286	chimerascan	2	0	20	5	57464180	57470745	134669448	134680370	+	+	GNAS	AK026965	57470745	134669448	uc010gjr.2|	uc003laj.1|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000265620,	UnSpec,	FrameShift 	1:ENST00000265620, 	73:ENST00000265620, 	-1:UnSpec, 	-1:UnSpec, 	MGCLGNSKTEDQRNEEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNGE*:ENST00000265620-UnSpec, 	Intron:ENST00000265620, 	-1:UnSpec, 	CDS:ENST00000265620, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000265620, 	DOMAIN_UNK:ENST00000265620, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4217	SRR064286	chimerascan	2	0	11	11	1775224	1785222	1756060	1769349	-	-	CTSD	CR626060	1775224	1769349	uc001luc.1|uc009yda.1|	uc001lub.1|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000236671,	UnSpec,	UnSpec 	1:ENST00000236671, 	323:ENST00000236671, 	-1:UnSpec, 	-1:UnSpec, 	MQPSSLLPLALCLLAAPASALVRIPLHKFTSIRRTMSEVGGSVEDLIAKGPVSKYSQAVPAVTEGPIPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCQSASSASALGGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTDSKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPLIQG:ENST00000236671-UnSpec, 	7:ENST00000236671, 	-1:UnSpec, 	CDS:ENST00000236671, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000236671, 	DOMAIN_UNK:ENST00000236671, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0001	4218	SRR064286	chimerascan	2	0	1	15	155278539	155278756	43432319	43433465	+	-	FDPS	CR599671	155278756	43433465	uc001fkd.2|	uc001zqs.1|	breast_cancer	SRR064286,SRR064438,	breast_cancer,	NO_KINASE	ENST00000356657,	UnSpec,	UnSpec 	0:ENST00000356657, 	0:ENST00000356657, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000356657-UnSpec, 	Intron:ENST00000356657, 	Intron:UnSpec, 	5UTR:ENST00000356657, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000356657, 	DOMAIN_UNK:ENST00000356657, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.9922	4219	SRR064286	chimerascan	2	0	14	20	73525221	73566458	46286151	46305367	+	-	RBM25	SULF2	73566458	46305367	uc001xnn.3|uc001xnp.2|uc001xno.2|uc010ttu.1|	uc002xtq.2|uc002xtr.2|uc002xto.2|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000261973,	ENST00000359930,ENST00000484875,	InFrame 	1:ENST00000261973, 	289:ENST00000261973, 	417:ENST00000359930,ENST00000484875, 	870:ENST00000359930,ENST00000484875, 	MSFPPHLNRPPMGIPALPPGIPPPQFPGFPPPVPPGTPMIPVPMSIMAPAPTVLVPTVSMVGKHLGARKDHPGLKAKENDENCGPTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGASGKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDAKTKAQLDEWKAKKKASNGNARPETVTNDDEEALDEETKRRDQMIKGAIEVLIREYSSELNAPSQESDSHPRKKKKEKKEDIFRRFPVAPLIPYPLITKEDINAIEMEEDKRDLISREISKFRDTHKGKLLHKRDNDKVDAQEENFLPKYQRVKDLCQRAEYQTACEQLGQKWQCVEDATGKLKLHKCKGPMRLGGSRALSNLVPKYYGQGSEACTCDSGDYKLSLAGRRKKLFKKKYKASYVRSRSIRSVAIEVDGRVYHVGLGDAAQPRNLTKRHWPGAPEDQDDKDGGDFSGTGGLPDYSAANPIKVTHRCYILENDTVQCDLDLYKSLQAWKDHKLHIDHEIETLQNKIKNLREVRGHLKKKRPEECDCHKISYHTQHKGRLKHRGSSLHPFRKGLQEKDKVWLLREQKRKKKLRKLLKRLQNNDTCSMPGLTCFTHDNQHWQTAPFWTLGPFCACTSANNNTYWCMRTINETHNFLFCEFATGFLEYFDLNTDPYQLMNAVNTLDRDVLNQLHVQLMELRSCKGYKQCNPRTRNMDLGLKDGGSYEQYRQFQRRKWPEMKRPSSKSLGQLWEGWEG:ENST00000261973-ENST00000484875,ENST00000261973-ENST00000359930, 	Intron:ENST00000261973, 	Intron:ENST00000359930,ENST00000484875, 	CDS:ENST00000261973, 	CDS:ENST00000359930,ENST00000484875, 	Domain=RRM;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00176,Region=Necessary for nuclear speckle localization,:ENST00000261973, 	Domain=PWI;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00627,:ENST00000261973, 	NO_DOMAIN:ENST00000359930,ENST00000484875, 	NO_DOMAIN:ENST00000359930,ENST00000484875, 
0.0008	4220	SRR064286	chimerascan	2	0	9	18	102861511	103035358	47349156	47404252	+	-	INVS	MYO5B	103035358	47404252	uc004bao.1|uc011lve.1|uc004bap.1|uc010mtb.1|uc010mta.1|uc004bar.1|uc004baq.1|	uc002leb.2|uc002lea.2|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000262457,ENST00000262456,	ENST00000324581,ENST00000285039,	FrameShift 	1:ENST00000262457,ENST00000262456, 	595:ENST00000262457,ENST00000262456, 	-1:ENST00000324581,ENST00000285039, 	-1:ENST00000324581,ENST00000285039, 	MNKSENLLFAGSSLASQVHAAAVNGDKGALQRLIVGNSALKDKEDQFGRTPLMYCVLADRLDCADALLKAGADVNKTDHSQRTALHLAAQKGNYRFMKLLLTRRANWMQKDLEEMTPLHLTTRHRSPKCLALLLKFMAPGEVDTQDKNKQTALHWSAYYNNPEHVKLLIKHDSNIGIPDVEGKIPLHWAANHKDPSAVHTVRCILDAAPTESLLNWQDYEGRTPLHFAVADGNVTVVDVLTSYESCNITSYDNLFRTPLHWAALLGHAQIVHLLLERNKSGTIPSDSQGATPLHYAAQSNFAETVKVFLKHPSVKDDSDLEGRTSFMWAAGKGSDDVLRTMLSLKSDIDINMADKYGGTALHAAALSGHVSTVKLLLENNAQVDATDVMKHTPLFRACEMGHKDVIQTLIKGGARVDLVDQDGHSLLHWAALGGNADVCQILIENKINPNVQDYAGRTPLQCAAYGGYINCMAVLMENNADPNIQDKEGRTALHWSCNNGYLDAIKLLLDFAAFPNQMENNEERYTPLDYALLGERHEVIQFMLEHGALSIAAIQDIAAFKIQAVYKGYKVRKAFRDRKNLLMKHEQLRKDAAAKANSRS*:ENST00000262457-ENST00000324581,ENST00000262457-ENST00000285039,ENST00000262456-ENST00000324581,ENST00000262456-ENST00000285039, 	Intron:ENST00000262457,ENST00000262456, 	Intron:ENST00000324581,ENST00000285039, 	CDS:ENST00000262457,ENST00000262456, 	CDS:ENST00000324581,ENST00000285039, 	Repeat=ANK 1,Repeat=ANK 2,Repeat=ANK 3,Repeat=ANK 4,Repeat=ANK 5,Repeat=ANK 6,Repeat=ANK 7,Repeat=ANK 8,Repeat=ANK 9,Repeat=ANK 10,Repeat=ANK 11,Repeat=ANK 12,Repeat=ANK 13,Repeat=ANK 14,Repeat=ANK 15,Repeat=ANK 16,Domain=IQ 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,:ENST00000262457,ENST00000262456, 	Domain=IQ 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,:ENST00000262457,ENST00000262456, 	NO_DOMAIN:ENST00000324581,ENST00000285039, 	Domain=Dilute;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS51126,:ENST00000324581, Domain=Myosin motor,Domain=IQ 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=IQ 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=IQ 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=IQ 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=IQ 5;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=IQ 6;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=Dilute;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00503,Region=Actin-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255,:ENST00000285039, 
0.5700	4221	SRR064286	chimerascan	2	0	9	9	140098537	140100090	140086069	140087143	-	-	TMEM203	C9orf75	140098537	140087143	uc004clv.2|	uc004clu.2|uc004clt.2|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000343666,	ENST00000321773,	InFrame 	1:ENST00000343666, 	136:ENST00000343666, 	-1:ENST00000321773, 	-1:ENST00000321773, 	MLFSLRELVQWLGFATFEIFVHLLALLVFSVLLALRVDGLVPGLSWWNVFVPFFAADGLSTYFTTIVSVRLFQDGEKRLAVLRLFWVLTVLSLKFVFEMLLCQKLAEQTRELWFGLITSPLFILLQLLMIRACRVN:ENST00000343666-ENST00000321773, 	Intron:ENST00000343666, 	Intron:ENST00000321773, 	3UTR:ENST00000343666, 	CDS:ENST00000321773, 	NO_DOMAIN:ENST00000343666, 	NO_DOMAIN:ENST00000343666, 	DOMAIN_UNK:ENST00000321773, 	DOMAIN_UNK:ENST00000321773, 
0.9175	4222	SRR064286	chimerascan	2	0	3	10	46919236	46925124	133753535	133770051	+	+	PTH1R	PPP2R2D	46925124	133753535	uc003cqn.2|uc003cqm.2|	uc001lks.2|uc009yay.2|uc001lkt.2|uc001lkr.2|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000313049,	ENST00000482010,	InFrame 	1:ENST00000313049, 	25:ENST00000313049, 	0:ENST00000482010, 	0:ENST00000482010, 	MGTARIAPGLALLLCCPVLSSAYAL:ENST00000313049-ENST00000482010, 	Intron:ENST00000313049, 	-1:ENST00000482010, 	CDS:ENST00000313049, 	3UTR:ENST00000482010, 	NO_DOMAIN:ENST00000313049, 	Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,:ENST00000313049, 	DOMAIN_UNK:ENST00000482010, 	DOMAIN_UNK:ENST00000482010, 
0.0004	4223	SRR064286	chimerascan	2	0	7	3	130295824	130353598	128976570	128996614	-	+	COPG2	COPG	130295824	128976570	uc003vqh.1|uc003vqh.1|	uc010htb.2|uc003els.2|	breast_cancer	SRR064286,SRR064439,SRR064440,	breast_cancer,	NO_KINASE	ENST00000445977,	ENST00000314797,	FrameShift 	1:ENST00000445977, 	245:ENST00000445977, 	-1:ENST00000314797, 	-1:ENST00000314797, 	MIKKFDKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTEATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGTMLQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWINEAQEAASSDNIMVQYHALGVLYHLRKNDRLAVSKMLNKFTKSGLKSQFAYCMLIRIASRLLKETEDA*:ENST00000445977-ENST00000314797, 	9:ENST00000445977, 	10:ENST00000314797, 	CDS:ENST00000445977, 	CDS:ENST00000314797, 	NO_DOMAIN:ENST00000445977, 	NO_DOMAIN:ENST00000445977, 	NO_DOMAIN:ENST00000314797, 	Repeat=HEAT 1,Repeat=HEAT 2,Repeat=HEAT 3,Repeat=HEAT 4,Region=Interaction with ZNF289/ARFGAP2,:ENST00000314797, 
0.0001	4224	SRR064286	chimerascan	2	0	7	7	64126511	64139714	64144465	64147263	+	+	ZNF107	BC053669	64139714	64144465	uc003tte.2|uc003ttd.2|	uc003ttf.2|	breast_cancer	SRR064286,SRR064438,	breast_cancer,	NO_KINASE	ENST00000344930,	UnSpec,	UnSpec 	0:ENST00000344930, 	0:ENST00000344930, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000344930-UnSpec, 	Intron:ENST00000344930, 	Intron:UnSpec, 	5UTR:ENST00000344930, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000344930, 	DOMAIN_UNK:ENST00000344930, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4225	SRR064286	chimerascan	2	0	15	5	22892684	22928510	156723681	156822604	+	+	CYFIP1	CYFIP2	22928510	156723681	uc001yus.2|uc010aya.1|uc001yut.2|	uc003lwt.2|uc011ddp.1|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE																
0.0002	4226	SRR064286	chimerascan	2	0	19	16	10946685	10946983	31202063	31203097	-	+	TMED1	FUS/CHOP,FUS	10946685	31202063	uc002mpy.2|	uc002ebh.2|uc002ebg.2|uc002ebj.2|uc002ebi.2|uc002ebf.2|	breast_cancer	SRR064286,SRR064440,	breast_cancer,	NO_KINASE	ENST00000214869,	ENST00000394533,ENST00000254108,ENST00000433338,	FrameShift 	1:ENST00000214869, 	60:ENST00000214869, 	-1:ENST00000394533,ENST00000254108,ENST00000433338, 	-1:ENST00000394533,ENST00000254108,ENST00000433338, 	MMAAGAALALALWLLMPPVEVGGAGPPPIQDGEFTFLLPAGRKQCFYQSAPANASLETEYQPVRI*:ENST00000214869-ENST00000433338,ENST00000214869-ENST00000254108,ENST00000214869-ENST00000394533, 	1:ENST00000214869, 	13:ENST00000394533,ENST00000254108,ENST00000433338, 	CDS:ENST00000214869, 	CDS:ENST00000394533,ENST00000254108,ENST00000433338, 	Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=GOLD;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00096,:ENST00000214869, 	Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,:ENST00000214869, 	NO_DOMAIN:ENST00000394533,ENST00000254108,ENST00000433338, 	Domain=RRM;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00176,:ENST00000254108, NO_DOMAIN:ENST00000394533,ENST00000433338, 
0.7608	4227	SRR064287	chimerascan	37	16	19	19	571325	580782	13135835	13209609	+	+	hEMMPRIN,BSG	NFIX	580782	13135835	uc010drr.2|uc002lpb.2|uc002loy.2|uc002loz.2|uc002lpc.2|uc002lpa.2|	uc010xmx.1|uc002mwe.2|uc002mwf.2|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000333511,	ENST00000380945,ENST00000438869,ENST00000358552,ENST00000264825,ENST00000397661,	InFrame 	1:ENST00000333511, 	264:ENST00000333511, 	18:ENST00000438869, 10:ENST00000397661, 9:ENST00000380945,ENST00000358552, 13:ENST00000264825, 	403:ENST00000264825, 501:ENST00000380945, 510:ENST00000438869, 502:ENST00000397661, 460:ENST00000358552, 	MAAALFVLLGFALLGTHGASGAAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDTCSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRVKWVRAQAVVLVLEPGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKDEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDSSNQQGDADIKPLPNGHLSFQDCFVTSGVWNVTELVRVSQTPVATASGPNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGRSPAAGSSQSSGWPNDVDAGSPRATASALHFPSTSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQFVCSDGSGQATGQHSQRQAPPLPTGLSASDPGTATF:ENST00000333511-ENST00000264825, MAAALFVLLGFALLGTHGASGAAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDTCSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRVKWVRAQAVVLVLEPGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKDEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDSSNQQGDADIKPLPNGHLSFQDCFVTSGVWNVTELVRVSQTPVATASGPNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGRSPAAGSSQSSGWPNDVDAGSPRATASALHFPSTSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQFVCSDGSGQATGQPNGSGQGKVPGSFLLPPPPPVARPVPLPMPDSKSTSTAPDGAALTPPSPSFATTGASSANRFVSIGPRDGNFLNIPQQSQSWFL:ENST00000333511-ENST00000358552, MAAALFVLLGFALLGTHGASGAAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDTCSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRVKWVRAQAVVLVLEPGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKDEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDSSNQQGDADIKPLPNGHLSFQDCFVTSGVWNVTELVRVSQTPVATASGPNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGRSPAAGSSQSSGWPNDVDAGPASLKKSGKLDFCSALSSQGSSPRMAFTHHPLPVLAGVRPGSPRATASALHFPSTSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQFVCSDGSGQATGQPNGSGQGKVPGSFLLPPPPPVARPVPLPMPDSKSTSTAPDGAALTPPSPSFATTGASSANRFVSIGPRDGNFLNIPQQSQSWFL:ENST00000333511-ENST00000438869,ENST00000333511-ENST00000397661,ENST00000333511-ENST00000380945, 	Intron:ENST00000333511, 	1:ENST00000380945,ENST00000358552, 2:ENST00000438869,ENST00000264825,ENST00000397661, 	CDS:ENST00000333511, 	CDS:ENST00000380945,ENST00000438869,ENST00000358552,ENST00000264825,ENST00000397661, 	Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=Ig-like C2-type,Domain=Ig-like V-type,:ENST00000333511, 	Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,:ENST00000333511, 	Domain=CTF/NF-I DNA-binding;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS51080,:ENST00000358552, NO_DOMAIN:ENST00000380945,ENST00000438869,ENST00000264825,ENST00000397661, 	NO_DOMAIN:ENST00000380945,ENST00000438869,ENST00000358552,ENST00000264825,ENST00000397661, 
0.0002	4228	SRR064287	chimerascan	8	5	9	9	139438476	139440238	134062676	134109090	-	+	NOTCH1	NUP214,KIAA0023	139438476	134062676	uc004chz.2|	uc004cag.2|uc004cai.2|uc010mzf.2|uc010mzg.2|uc004cah.2|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000277541,	ENST00000451030,ENST00000359428,ENST00000411637,	FrameShift 	1:ENST00000277541, 	46:ENST00000277541, 	-1:ENST00000451030,ENST00000359428,ENST00000411637, 	-1:ENST00000451030,ENST00000359428,ENST00000411637, 	MPPLLAPLLCLALLPALAARGPRCSQPGETCLNGGKCEAANGTEACVFSALLHSQNTSPSVDPSGC*:ENST00000277541-ENST00000451030,ENST00000277541-ENST00000411637,ENST00000277541-ENST00000359428, 	2:ENST00000277541, 	25:ENST00000451030,ENST00000359428,ENST00000411637, 	CDS:ENST00000277541, 	CDS:ENST00000451030,ENST00000359428,ENST00000411637, 	Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=EGF-like 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,:ENST00000277541, 	Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=EGF-like 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 5%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 6;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 7%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 8%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 9%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 10;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 11%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 12%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 13%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 14%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 15%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 16%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 17%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 18%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 19%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 20;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 21%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 22;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 23%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 24;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 25%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 26;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 27;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 28;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 29;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 30;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 31%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 32%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 33;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 34;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 35;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 36;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Repeat=LNR 1,Repeat=LNR 2,Repeat=LNR 3,Repeat=ANK 1,Repeat=ANK 2,Repeat=ANK 3,Repeat=ANK 4,Repeat=ANK 5,Repeat=ANK 6,Region=Interaction with DLL4;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q07008,Region=Interaction with DLL4;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q07008,Region=HIF1AN-binding;Ontology_term=ECO:0000250;evidence=ECO:0000250,Region=HIF1AN-binding;Ontology_term=ECO:0000250;evidence=ECO:0000250,:ENST00000277541, 	NO_DOMAIN:ENST00000451030,ENST00000359428,ENST00000411637, 	NO_DOMAIN:ENST00000451030, Repeat=Blade 1,Repeat=Blade 2,Repeat=Blade 3,Repeat=Blade 4,Repeat=Blade 5,Repeat=Blade 6,Repeat=Blade 7,Region=Seven-bladed beta propeller,Region=11 X 5 AA approximate repeats,Region=Leucine-zipper 1,Region=Leucine-zipper 2,Region=18 X 4 AA approximate repeats,Region=11 X 3 AA approximate repeats,:ENST00000359428,ENST00000411637, 
0.0002	4229	SRR064287	chimerascan	9	3	11	11	1775033	1785222	1756060	1769349	-	-	CTSD	CR626060	1775033	1769349	uc009yda.1|uc001luc.1|	uc001lub.1|	breast_cancer	SRR064287,SRR064439,	breast_cancer,	NO_KINASE	ENST00000236671,	UnSpec,	UnSpec 	1:ENST00000236671, 	356:ENST00000236671, 	-1:UnSpec, 	-1:UnSpec, 	MQPSSLLPLALCLLAAPASALVRIPLHKFTSIRRTMSEVGGSVEDLIAKGPVSKYSQAVPAVTEGPIPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCQSASSASALGGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTDSKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPLIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTL:ENST00000236671-UnSpec, 	8:ENST00000236671, 	-1:UnSpec, 	CDS:ENST00000236671, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000236671, 	DOMAIN_UNK:ENST00000236671, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0004	4230	SRR064287	chimerascan	8	4	13	13	32420920	32520318	32652971	32870775	+	+	EEF1DP3	FRY	32520318	32652971	uc010tdv.1|	uc001utx.2|uc010tdw.1|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000380250,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000380250, 	-1:ENST00000380250, 	FSRWQRLHQASGSTCFWHAQGERAANHATHQCGPRQ*:UnSpec-ENST00000380250, 	-1:UnSpec, 	2:ENST00000380250, 	Intergenic:UnSpec, 	CDS:ENST00000380250, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000380250, 	DOMAIN_UNK:ENST00000380250, 
0.9993	4231	SRR064287	chimerascan	6	4	12	2	80211174	80328978	110300378	110343415	-	-	PPP1R12A	SEPT10	80211174	110343415	uc001szb.2|uc001syz.2|uc010suc.1|uc010sud.1|uc001sza.2|uc001szc.2|	uc002tex.2|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000450142,ENST00000360825,ENST00000312727,ENST00000261207,ENST00000341878,	ENST00000334001,ENST00000356688,	InFrame 	1:ENST00000450142,ENST00000360825,ENST00000312727,ENST00000261207,ENST00000341878, 	412:ENST00000450142,ENST00000360825,ENST00000312727,ENST00000261207,ENST00000341878, 	33:ENST00000334001,ENST00000356688, 	544:ENST00000334001,ENST00000356688, 	MKMADAKQKRNEQLKRWIGSETDLEPPVVKRQKTKVKFDDGAVFLAACSSGDTDEVLKLLHRGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEFLIGQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAGYDVNIKDYDGWTPLHAAAHWGKEEACRILVDNLCDMEMVNKVGQTAFDVADEDILGYLEELQKKQNLLHSEKRDKKSPLIESTANMDNNQSQKTFKNKETLIIEPEKNASRIESLEQEKVDEEEEGKKDESSCSSEEDEEDDSESEAETDKTKPLASVTNANTSSTQAAPVAVTTPTVSSGQATPTSPIKKKRENIRSLTMSGHVGFESLPDQLVNRSIQQGFCFNILCVGETGIGKSTLIDTLFNTNFEDYESSHFCPNVKLKAQTYELQESNVQLKLTIVNTVGFGDQINKEESYQPIVDYIDAQFEAYLQEELKIKRSLFTYHDSRIHVCLYFISPTGHSLKTLDLLTMKNLDSKVNIIPVIAKADTVSKTELQKFKIKLMSELVSNGVQIYQFPTDDDTIAKVNAAMNGQLPFAVVGSMDEVKVGNKMVKARQYPWGVVQVENENHCDFVKLREMLICTNMEDLREQTHTRHYELYRRCKLEEMGFTDVGPENKPVSVQETYEAKRHEFHGERQRKEEEMKQMFVQRVKEKEAILKEAERELQAKFEHLKRLHQEERMKLEEKRRLLEEEIIAFSKKKATSEIFHSQSFLATGSNLRKDKDRKKEPGCRFELLCIDVRACETNGGRKDAEKAPIFCKTEVPEHRRSSSQANFIKKKLEVCFDFAVICFITSIFGEQPQLLIFMEKYFQVQGQYISQSE:ENST00000341878-ENST00000334001,ENST00000312727-ENST00000334001,ENST00000312727-ENST00000356688,ENST00000261207-ENST00000334001,ENST00000450142-ENST00000356688,ENST00000261207-ENST00000356688,ENST00000360825-ENST00000356688,ENST00000341878-ENST00000356688,ENST00000450142-ENST00000334001,ENST00000360825-ENST00000334001, 	9:ENST00000450142, 10:ENST00000360825,ENST00000312727,ENST00000261207,ENST00000341878, 	Intron:ENST00000334001,ENST00000356688, 	CDS:ENST00000450142,ENST00000360825,ENST00000312727,ENST00000261207,ENST00000341878, 	CDS:ENST00000334001,ENST00000356688, 	NO_DOMAIN:ENST00000360825,ENST00000312727,ENST00000341878, Repeat=ANK 1,Repeat=ANK 2,Repeat=ANK 3,Repeat=ANK 4,Repeat=ANK 5,Repeat=ANK 6,:ENST00000450142,ENST00000261207, 	NO_DOMAIN:ENST00000360825,ENST00000312727,ENST00000341878, Region=Interaction with ROCK2,:ENST00000450142,ENST00000261207, 	Domain=Septin-type G (guanine nucleotide-binding);Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS51719,:ENST00000356688, NO_DOMAIN:ENST00000334001, 	NO_DOMAIN:ENST00000334001,ENST00000356688, 
0.0004	4232	SRR064287	chimerascan	5	0	3	3	158449929	158450275	183819273	183824782	-	+	RARRES1	HTR3E	158449929	183819273	uc003fcj.2|uc003fci.2|	uc003fmm.2|uc010hxq.2|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000479756,ENST00000498640,ENST00000237696,	ENST00000335304,ENST00000415389,	FrameShift 	1:ENST00000479756,ENST00000498640,ENST00000237696, 	91:ENST00000479756,ENST00000498640,ENST00000237696, 	-1:ENST00000335304,ENST00000415389, 	-1:ENST00000335304,ENST00000415389, 	MQPRRQRLPAPWSGPRGPRPTAPLLALLLLLAPVAAPAGSGDPDDPGQPQDAGVPRRLLQQAARAALHFFNFRSGSPSALRVLAEVQEGRA*:ENST00000479756-ENST00000335304,ENST00000237696-ENST00000335304,ENST00000498640-ENST00000335304,ENST00000479756-ENST00000415389,ENST00000498640-ENST00000415389,ENST00000237696-ENST00000415389, 	1:ENST00000479756,ENST00000498640,ENST00000237696, 	3:ENST00000415389, 2:ENST00000335304, 	CDS:ENST00000479756,ENST00000498640,ENST00000237696, 	CDS:ENST00000335304,ENST00000415389, 	NO_DOMAIN:ENST00000498640, Topological domain=Lumenal;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,:ENST00000479756,ENST00000237696, 	NO_DOMAIN:ENST00000479756,ENST00000498640,ENST00000237696, 	NO_DOMAIN:ENST00000335304,ENST00000415389, 	Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,:ENST00000335304,ENST00000415389, 
0.6397	4233	SRR064287	chimerascan	4	4	9	9	140513444	140513501	135073353	135118220	+	+	EHMT1	NTNG2	140513501	135073353	uc004coa.2|uc011mfc.1|uc004cob.1|	uc004cbh.2|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000462484,ENST00000460843,	ENST00000360670,	InFrame 	1:ENST00000462484,ENST00000460843, 	7:ENST00000462484,ENST00000460843, 	72:ENST00000360670, 	536:ENST00000360670, 	MAAADAEENPYLCSNECDASNPDLAHPPRLMFDKEEEGLATYWQSITWSRYPSPLEANITLSWNKTVELTDDVVMTFEYGRPTVMVLEKSLDNGRTWQPYQFYAEDCMEAFGMSARRARDMSSSSAHRVLCTEEYSRWAGSKKEKHVRFEVRDRFAIFAGPDLRNMDNLYTRLESAKGLKEFFTLTDLRMRLLRPALGGTYVQRENLYKYFYAISNIEVIGRCKCNLHANLCSMREGSLQCECEHNTTGPDCGKCKKNFRTRSWRAGSYLPLPHGSPNACTAPSGTFSKDAFLHCECYGHSNRCSYIDFLNVVTCVSCKHNTRGQHCQHCRLGYYRNGSAELDDENVCIECNCNQIGSVHDRCNETGFCECREGAAGPKCDDCLPTHYWRQGCYPNVCDDDQLLCQNGGTCLQNQRCACPRGYTGVRCEQPRCDPADDDGGLDCDRAPGAAPRPATLLGCLLLLGLAARLGR:ENST00000460843-ENST00000360670,ENST00000462484-ENST00000360670, 	Intron:ENST00000462484,ENST00000460843, 	3:ENST00000360670, 	CDS:ENST00000462484,ENST00000460843, 	CDS:ENST00000360670, 	NO_DOMAIN:ENST00000462484,ENST00000460843, 	Repeat=ANK 1,Repeat=ANK 2,Repeat=ANK 3,Repeat=ANK 4,Repeat=ANK 5,Repeat=ANK 6,Repeat=ANK 7,Repeat=ANK 8,Domain=Pre-SET;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00157,Domain=SET;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00190,Region=Histone H3K9me binding,Region=S-adenosyl-L-methionine binding,Region=Interaction with histone H3,Region=S-adenosyl-L-methionine binding,Region=Interaction with histone H3,:ENST00000462484,ENST00000460843, 	NO_DOMAIN:ENST00000360670, 	NO_DOMAIN:ENST00000360670, 
0.0003	4234	SRR064287	chimerascan	4	0	17	17	37856254	37856564	61509666	61515531	+	-	ERBB2,HER-2	CYB561	37856564	61515531	uc010wek.1|uc002hso.2|uc010cwb.2|uc002hsp.2|uc002hsn.1|	uc002jaq.2|	breast_cancer	SRR064287,SRR064438,SRR064439,SRR064440,	breast_cancer,	5p_KINASE	ENST00000269571,	ENST00000360793,	FrameShift 	1:ENST00000269571, 	24:ENST00000269571, 	-1:ENST00000360793, 	-1:ENST00000360793, 	MELAALCRWGLLLALLPPGAASTQGLSLHPHRIWNSWRRVPGHACPRGEAGPLPPATPET*:ENST00000269571-ENST00000360793, 	Intron:ENST00000269571, 	-1:ENST00000360793, 	CDS:ENST00000269571, 	5UTR:ENST00000360793, 	DOMAIN_UNK:ENST00000269571, 	DOMAIN_UNK:ENST00000269571, 	DOMAIN_UNK:ENST00000360793, 	DOMAIN_UNK:ENST00000360793, 
0.0004	4235	SRR064287	chimerascan	3	0	9	13	131133598	131140385	26343184	26595419	+	+	URM1	ATP8A2,DKFZp434B1913	131140385	26343184	uc004buv.2|uc011may.1|	uc010tdi.1|uc010aaj.1|uc010tdj.1|uc001uqk.2|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000372847,	ENST00000381655,	FrameShift 	1:ENST00000372847, 	49:ENST00000372847, 	-1:ENST00000381655, 	-1:ENST00000381655, 	MAAPLSVEVEFGSSPGCLFLWSSFAEVVRSSCLTVLRNIESLCLDRRNPGVSSAEV*:ENST00000372847-ENST00000381655, 	Intron:ENST00000372847, 	26:ENST00000381655, 	CDS:ENST00000372847, 	CDS:ENST00000381655, 	NO_DOMAIN:ENST00000372847, 	NO_DOMAIN:ENST00000372847, 	NO_DOMAIN:ENST00000381655, 	Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Exoplasmic loop;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Exoplasmic loop;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Exoplasmic loop;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Exoplasmic loop;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Exoplasmic loop;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,:ENST00000381655, 
0.0189	4236	SRR064287	chimerascan	3	0	4	14	164087515	164088073	103800493	103811359	-	+	NAF1	EIF5	164087515	103800493	uc010iqw.1|uc003iqj.2|uc003iqk.2|	uc001ymr.2|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000274054,	ENST00000216554,	FrameShift 	1:ENST00000274054, 	121:ENST00000274054, 	-1:ENST00000216554, 	-1:ENST00000216554, 	MEVVEAAAAQLETLKFNGTDFGVGEGPAAPSPGSAPVPGTQPPLQSFEGSPDAGQTVEVKPAGEQPLQPVLNAVAAGTPAPQPQPPAESPACGDCVTSPGAAEPARAPDSLETSDSDSDSDTANGQ*:ENST00000274054-ENST00000216554, 	1:ENST00000274054, 	-1:ENST00000216554, 	CDS:ENST00000274054, 	5UTR:ENST00000216554, 	DOMAIN_UNK:ENST00000274054, 	DOMAIN_UNK:ENST00000274054, 	DOMAIN_UNK:ENST00000216554, 	DOMAIN_UNK:ENST00000216554, 
0.0002	4237	SRR064287	chimerascan	2	2	9	9	97136833	97200810	97101118	97123230	+	+	HIATL1	AK095188	97200810	97101118	uc004aur.2|uc011luh.1|	uc004auq.1|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000375344,	UnSpec,	UnSpec 	1:ENST00000375344, 	132:ENST00000375344, 	-1:UnSpec, 	-1:UnSpec, 	MSVEPPPELEEKAASEPEAGAMPEKRAGAQAAGSTWLQGFGRPSVYHAAIVIFLEFFAWGLLTTPMLTVLHETFSQHTFLMNGLIQGVKGLLSFLSAPLIGALSDVWGRKPFLLGTVFFTCFPIPLMRISPW:ENST00000375344-UnSpec, 	Intron:ENST00000375344, 	-1:UnSpec, 	CDS:ENST00000375344, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000375344, 	DOMAIN_UNK:ENST00000375344, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4238	SRR064287	chimerascan	2	2	20	20	31172372	31172875	31052584	31115716	-	-	LOC284804	C20orf112	31172372	31115716	uc002wxx.2|	uc002wxw.1|	breast_cancer	SRR064286,SRR064287,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000201961,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000201961, 	-1:ENST00000201961, 	GGRWPVGARGHLSEAGRCGGRFL*:UnSpec-ENST00000201961, 	-1:UnSpec, 	Intron:ENST00000201961, 	Intergenic:UnSpec, 	CDS:ENST00000201961, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000201961, 	DOMAIN_UNK:ENST00000201961, 
0.0002	4239	SRR064287	chimerascan	2	2	9	9	99711837	99775862	97101118	97123230	-	+	HIATL2	AK095188	99711837	97101118	uc004aws.2|	uc004auq.1|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000375223,	UnSpec,	UnSpec 	1:ENST00000375223, 	131:ENST00000375223, 	-1:UnSpec, 	-1:UnSpec, 	MSVEPPPELEEKAASEPEAGAMPEKRAGAQAAGSTWLQGFGPPSVYHAAIVIFLEFFAWGLLTTPMLTVLHETFSQHTFLMNGLIQGVKGLLSFLSAPLIGALSDVWGRKPFLLGTVFFTCFPIPLMRISP:ENST00000375223-UnSpec, 	4:ENST00000375223, 	-1:UnSpec, 	CDS:ENST00000375223, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000375223, 	DOMAIN_UNK:ENST00000375223, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4240	SRR064287	chimerascan	2	2	4	4	76649460	76649795	76567955	76587233	-	-	AK311578	G3BP2	76649460	76587233	uc010iiy.2|	uc003hir.2|uc003his.2|uc003hit.2|	breast_cancer	SRR064287,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,	NO_KINASE																
0.2361	4241	SRR064287	chimerascan	2	1	14	14	105941131	105945830	105954503	105955122	+	+	CRIP2	CRIP1	105945830	105954503	uc001yrd.1|uc001yrg.2|uc001yrf.1|uc010tyr.1|uc001yrh.1|	uc001yri.3|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000483017,ENST00000329146,	ENST00000392531,ENST00000330233,ENST00000409393,	InFrame 	1:ENST00000483017,ENST00000329146, 	186:ENST00000329146, 262:ENST00000483017, 	14:ENST00000392531,ENST00000330233,ENST00000409393, 	77:ENST00000392531,ENST00000330233,ENST00000409393, 	MASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFGPKGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPPKGPSRASSVTTFTGEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYGILFGPKGERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFGPKGFGRGGAESHTFK:ENST00000329146-ENST00000409393,ENST00000329146-ENST00000330233,ENST00000329146-ENST00000392531, MPPHHLLPWLAQVPSAEGELVRLVSRAGGRGACFWPAVTMEMAVAAGCVCKGGGCCHREPSQDHHESQEHRGPLVGSQTCLVHQAEGTAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFGPKGERVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPPKGPSRASSVTTFTGEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYGILFGPKGERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFGPKGFGRGGAESHTFK:ENST00000483017-ENST00000409393,ENST00000483017-ENST00000330233,ENST00000483017-ENST00000392531, 	Intron:ENST00000483017,ENST00000329146, 	3:ENST00000392531,ENST00000409393, 2:ENST00000330233, 	CDS:ENST00000483017,ENST00000329146, 	CDS:ENST00000392531,ENST00000330233,ENST00000409393, 	Domain=LIM zinc-binding 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00125,Domain=LIM zinc-binding 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00125,:ENST00000483017,ENST00000329146, 	NO_DOMAIN:ENST00000483017,ENST00000329146, 	Domain=LIM zinc-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00125,:ENST00000392531,ENST00000330233,ENST00000409393, 	NO_DOMAIN:ENST00000392531,ENST00000330233,ENST00000409393, 
0.0004	4242	SRR064287	chimerascan	2	1	9	9	123719563	123812554	89771488	89774641	-	+	C5	C9orf170	123719563	89771488	uc004bkv.2|	uc004apa.1|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000223642,	ENST00000375941,	FrameShift 	1:ENST00000223642, 	1587:ENST00000223642, 	-1:ENST00000375941, 	-1:ENST00000375941, 	MGLLGILCFLIFLGKTWGQEQTYVISAPKIFRVGASENIVIQVYGYTEAFDATISIKSYPDKKFSYSSGHVHLSSENKFQNSAILTIQPKQLPGGQNPVSYVYLEVVSKHFSKSKRMPITYDNGFLFIHTDKPVYTPDQSVKVRVYSLNDDLKPAKRETVLTFIDPEGSEVDMVEEIDHIGIISFPDFKIPSNPRYGMWTIKAKYKEDFSTTGTAYFEVKEYVLPHFSVSIEPEYNFIGYKNFKNFEITIKARYFYNKVVTEADVYITFGIREDLKDDQKEMMQTAMQNTMLINGIAQVTFDSETAVKELSYYSLEDLNNKYLYIAVTVIESTGGFSEEAEIPGIKYVLSPYKLNLVATPLFLKPGIPYPIKVQVKDSLDQLVGGVPVTLNAQTIDVNQETSDLDPSKSVTRVDDGVASFVLNLPSGVTVLEFNVKTDAPDLPEENQAREGYRAIAYSSLSQSYLYIDWTDNHKALLVGEHLNIIVTPKSPYIDKITHYNYLILSKGKIIHFGTREKFSDASYQSINIPVTQNMVPSSRLLVYYIVTGEQTAELVSDSVWLNIEEKCGNQLQVHLSPDADAYSPGQTVSLNMATGMDSWVALAAVDSAVYGVQRGAKKPLERVFQFLEKSDLGCGAGGGLNNANVFHLAGLTFLTNANADDSQENDEPCKEILRPRRTLQKKIEEIAAKYKHSVVKKCCYDGACVNNDETCEQRAARISLGPRCIKAFTECCVVASQLRANISHKDMQLGRLHMKTLLPVSKPEIRSYFPESWLWEVHLVPRRKQLQFALPDSLTTWEIQGVGISNTGICVADTVKAKVFKDVFLEMNIPYSVVRGEQIQLKGTVYNYRTSGMQFCVKMSAVEGICTSESPVIDHQGTKSSKCVRQKVEGSSSHLVTFTVLPLEIGLHNINFSLETWFGKEILVKTLRVVPEGVKRESYSGVTLDPRGIYGTISRRKEFPYRIPLDLVPKTEIKRILSVKGLLVGEILSAVLSQEGINILTHLPKGSAEAELMSVVPVFYVFHYLETGNHWNIFHSDPLIEKQKLKKKLKEGMLSIMSYRNADYSYSVWKGGSASTWLTAFALRVLGQVNKYVEQNQNSICNSLLWLVENYQLDNGSFKENSQYQPIKLQGTLPVEARENSLYLTAFTVIGIRKAFDICPLVKIDTALIKADNFLLENTLPAQSTFTLAISAYALSLGDKTHPQFRSIVSALKREALVKGNPPIYRFWKDNLQHKDSSVPNTGTARMVETTAYALLTSLNLKDINYVNPVIKWLSEEQRYGGGFYSTQDTINAIEGLTEYSLLVKQLRLSMDIDVSYKHKGALHNYKMTDKNFLGRPVEVLLNDDLIVSTGFGSGLATVHVTTVVHKTSTSEEVCSFYLKIDTQDIEASHYRGYGNSDYKRIVACASYKPSREESSSGSSHAVMDISLPTGISANEEDLKALVEGVDQLFTDYQIKDGHVILQLNSIPSSDFLCVRFRIFELFEVGFLSPATFTVYEYHRPDKQCTMFYSTSNIKIQKVCEGAACKCVEADCGQMQEELDLTISAETRKQTACKPEIAYAYKVSITSITVENVFVKYKATLLDIYKTFCFSGKP*:ENST00000223642-ENST00000375941, 	39:ENST00000223642, 	2:ENST00000375941, 	CDS:ENST00000223642, 	CDS:ENST00000375941, 	Domain=Anaphylatoxin-like;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00022,Domain=NTR;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00295,Region=Involved in C5AR1 binding;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:9553099;Dbxref=PMID:9553099,:ENST00000223642, 	NO_DOMAIN:ENST00000223642, 	NO_DOMAIN:ENST00000375941, 	NO_DOMAIN:ENST00000375941, 
0.0189	4243	SRR064287	chimerascan	2	1	17	17	79980702	79980773	80015752	80022945	-	-	STRA13	DUS1L	79980702	80022945	uc002kdd.2|uc002kdc.2|	uc002kds.2|uc002kdt.2|uc002kdr.2|uc010wvi.1|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000306704,	ENST00000306796,	FrameShift 	1:ENST00000306704, 	11:ENST00000306704, 	-1:ENST00000306796, 	-1:ENST00000306796, 	MEGAGAGSGFRKPGDDAKAAGLRVLEPHPARGPPRRGPHGGPERAGLEAAEPAPRGTALLHAHAACPGLCPRRQLPEGEPVLRGVPRGPAPHRAVLCQ*:ENST00000306704-ENST00000306796, 	1:ENST00000306704, 	-1:ENST00000306796, 	CDS:ENST00000306704, 	5UTR:ENST00000306796, 	DOMAIN_UNK:ENST00000306704, 	DOMAIN_UNK:ENST00000306704, 	DOMAIN_UNK:ENST00000306796, 	DOMAIN_UNK:ENST00000306796, 
0.0002	4244	SRR064287	chimerascan	2	1	16	16	81118068	81129980	81087103	81087699	-	-	GCSH	C16orf46	81118068	81087699	uc002fge.2|uc002fgd.2|	uc010chf.2|	breast_cancer	SRR064287,SRR064439,	breast_cancer,	NO_KINASE	ENST00000315467,	ENST00000378611,	FrameShift 	1:ENST00000315467, 	141:ENST00000315467, 	381:ENST00000378611, 	388:ENST00000378611, 	MALRVVRSVRALLCTLRAVPSPAAPCPPRPWQLGVGAVRTLRTGPALLSVRKFTEKHEWVTTENGIGTVGISNFAQEALGDVVYCSLPEVGTKLNKQDEFGALESVKAASELYSPLSGEVTEINEALAENPGLVNKSCYEDAQEKEDK:ENST00000315467-ENST00000378611, 	4:ENST00000315467, 	Intron:ENST00000378611, 	CDS:ENST00000315467, 	CDS:ENST00000378611, 	Domain=Lipoyl-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01066,:ENST00000315467, 	NO_DOMAIN:ENST00000315467, 	NO_DOMAIN:ENST00000378611, 	NO_DOMAIN:ENST00000378611, 
0.0002	4245	SRR064287	chimerascan	2	0	19	19	39806722	39811489	39797457	39805976	-	-	BC110060	LRFN1	39806722	39805976	uc010egm.1|	uc002okw.2|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE																
0.0002	4246	SRR064287	chimerascan	2	0	M	M	237	368	12338	14645	-	+	DQ582201	MTND5	237	12338	uc004coq.3|	uc004cox.3|	breast_cancer	SRR064287,SRR064439,	breast_cancer,	NO_KINASE																
0.0001	4247	SRR064287	chimerascan	2	0	1	2	32479491	32497241	225629807	225643001	+	-	KHDRBS1	DOCK10,Nbla10300	32497241	225643001	uc001bub.2|uc001bub.2|uc001buc.1|uc001buc.1|	uc010fwz.1|uc002vob.2|uc002voa.2|uc002vob.2|uc010fwz.1|uc002voa.2|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000492989,ENST00000327300,	ENST00000258390,ENST00000409592,ENST00000373702,	FrameShift 	1:ENST00000492989,ENST00000327300, 	575:ENST00000492989, 208:ENST00000327300, 	-1:ENST00000258390,ENST00000409592,ENST00000373702, 	-1:ENST00000258390,ENST00000409592,ENST00000373702, 	MQRRDDPAARMSRSSGRSGSMDPSGAHPSVRQTPSRQPPLPHRSRGGGGGSRGGARASPATQPPPLLPPSATGPDATVGGPAPTPLLPPSATASVKMEPENKYLPELMAEKDSLDPSFTHAMQLLTAEIEKIQKGDSKKDDEENYLDLFSHKNMKLKERVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKGAFLKKKKVKSIFIKSLS*:ENST00000327300-ENST00000258390,ENST00000327300-ENST00000373702,ENST00000327300-ENST00000409592, MQRRDDPAARMSRSSGRSGSMDPSGAHPSVRQTPSRQPPLPHRSRGGGGGSRGGARASPATQPPPLLPPSATGPDATVGGPAPTPLLPPSATASVKMEPENKYLPELMAEKDSLDPSFTHAMQLLTAEIEKIQKGDSKKDDEENYLDLFSHKNMKLKERVLIPVKQYPKVRQKVLWIFELSL*:ENST00000492989-ENST00000373702,ENST00000492989-ENST00000409592,ENST00000492989-ENST00000258390, 	Intron:ENST00000492989,ENST00000327300, 	Intron:ENST00000258390,ENST00000409592,ENST00000373702, 	CDS:ENST00000492989,ENST00000327300, 	CDS:ENST00000258390,ENST00000409592,ENST00000373702, 	Domain=KH;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00117,Region=Involved in homodimerization;Ontology_term=ECO:0000305;evidence=ECO:0000305|PubMed:26758068;Dbxref=PMID:26758068,:ENST00000327300, Domain=KH;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00117,Region=Involved in homodimerization;Ontology_term=ECO:0000305;evidence=ECO:0000305|PubMed:26758068;Dbxref=PMID:26758068,Region=Interaction with HNRNPA1;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:17371836;Dbxref=PMID:17371836,:ENST00000492989, 	NO_DOMAIN:ENST00000492989, Region=Interaction with HNRNPA1;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:17371836;Dbxref=PMID:17371836,:ENST00000327300, 	NO_DOMAIN:ENST00000258390,ENST00000409592,ENST00000373702, 	Domain=PH;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00145,Domain=DHR-1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00983,Domain=DHR-2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00984,:ENST00000258390,ENST00000409592, NO_DOMAIN:ENST00000373702, 
0.0003	4248	SRR064287	chimerascan	2	0	17	X	37856254	37856564	133903597	133930385	+	-	ERBB2	FAM122B	37856564	133930385	uc010wek.1|	uc004exv.2|uc004exq.2|uc004exr.2|	breast_cancer	SRR064287,SRR064441,	breast_cancer,	5p_KINASE	ENST00000269571,	ENST00000298090,	FrameShift 	1:ENST00000269571, 	24:ENST00000269571, 	-1:ENST00000298090, 	-1:ENST00000298090, 	MELAALCRWGLLLALLPPGAASTQGPPPPSPSLRPLAPAPSCQSPAAQSCSESLGSP*:ENST00000269571-ENST00000298090, 	Intron:ENST00000269571, 	-1:ENST00000298090, 	CDS:ENST00000269571, 	5UTR:ENST00000298090, 	DOMAIN_UNK:ENST00000269571, 	DOMAIN_UNK:ENST00000269571, 	DOMAIN_UNK:ENST00000298090, 	DOMAIN_UNK:ENST00000298090, 
0.9800	4249	SRR064287	chimerascan	2	0	12	12	6457893	6473313	6437924	6443422	-	-	SCNN1A	TNFRSF1A	6457893	6443422	uc001qnx.2|uc001qnw.2|uc010sfb.1|uc010sfb.1|uc001qnv.2|uc001qnx.2|uc001qnv.2|uc001qnw.2|	uc001qnt.2|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000358945,ENST00000360168,ENST00000228916,	ENST00000162749,	InFrame 	1:ENST00000358945,ENST00000360168,ENST00000228916, 	564:ENST00000358945, 542:ENST00000228916, 601:ENST00000360168, 	13:ENST00000162749, 	455:ENST00000162749, 	MEGNKLEEQDSSPPQSTPGLMKGNKREEQGLGPEPAAPQQPTAEEEALIEFHRSYRELFEFFCNNTTIHGAIRLVCSQHNRMKTAFWAVLWLCTFGMMYWQFGLLFGEYFSYPVSLNINLNSDKLVFPAVTICTLNPYRYPEIKEELEELDRITEQTLFDLYKYSSFTTLVAGSRSRRDLRGTLPHPLQRLRVPPPPHGARRARSVASSLRDNNPQVDWKDWKIGFQLCNQNKSDCFYQTYSSGVDAVREWYRFHYINILSRLPETLPSLEEDTLGNFIFACRFNQVSCNQANYSHFHHPMYGNCYTFNDKNNSNLWMSSMPGINNGLSLMLRAEQNDFIPLLSTVTGARVMVHGQDEPAFMDDGGFNLRPGVETSISMRKETLDRLGGDYGDCTKNGSDVPVENLYPSKYTQQVCIHSCFQESMIKECGCAYIFYPRPQNVEYCDYRKHSSWGYCYYKLQVDFSSDHLGCFTKCRKPCSVTSYQLSAGYSRWPSVTSQEWVFQMLSRQNNYTVNNKRNGVAKVNIFFKELNYKTNSESPSVTILPQVLLELLVGIYPSGVIGLVPHLGDREKRDSVCPQGKYIHPQNNSICCTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCTVDRDTVCGCRKNQYRHYWSENLFQCFNCSLCLNGTVHLSCQEKQNTVCTCHAGFFLRENECVSCSNCKKSLECTKLCLPQIENVKGTEDSGTTVLLPLVIFFGLCLLSLLFIGLMYRYQRWKSKLYSIVCGKSTPEKEGELEGTTTKPLAPNPSFSPTPGFTPTLGFSPVPSSTFTSSSTYTPGDCPNFAAPRREVAPPYQGADPILATALASDPIPNPLQKWEDSAHKPQSLDTDDPATLYAVVENVPPLRWKEFVRRLGLSDHEIDRLELQNGRCLREAQYSMLATWRRRTPRREATLELLGRVLRDMDLLGCLEDIEEALCGPAALPPAPSLLR:ENST00000228916-ENST00000162749, MEGNKLEEQDSSPPQSTPGLMKGNKREEQGLGPEPAAPQQPTAEEEALIEFHRSYRELFEFFCNNTTIHGAIRLVCSQHNRMKTAFWAVLWLCTFGMMYWQFGLLFGEYFSYPVSLNINLNSDKLVFPAVTICTLNPYRYPEIKEELEELDRITEQTLFDLYKYSSFTTLVAGSRSRRDLRGTLPHPLQRLRVPPPPHGARRARSVASSLRDNNPQVDWKDWKIGFQLCNQNKSDCFYQTYSSGVDAVREWYRFHYINILSRLPETLPSLEEDTLGNFIFACRFNQVSCNQANYSHFHHPMYGNCYTFNDKNNSNLWMSSMPGINNGLSLMLRAEQNDFIPLLSTVTGARVMVHGQDEPAFMDDGGFNLRPGVETSISMRKETLDRLGGDYGDCTKNGSDVPVENLYPSKYTQQVCIHSCFQESMIKECGCAYIFYPRPQNVEYCDYRKHSSWGQVRSLTPVIPALWEAEAGRSRGYCYYKLQVDFSSDHLGCFTKCRKPCSVTSYQLSAGYSRWPSVTSQEWVFQMLSRQNNYTVNNKRNGVAKVNIFFKELNYKTNSESPSVTILPQVLLELLVGIYPSGVIGLVPHLGDREKRDSVCPQGKYIHPQNNSICCTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCTVDRDTVCGCRKNQYRHYWSENLFQCFNCSLCLNGTVHLSCQEKQNTVCTCHAGFFLRENECVSCSNCKKSLECTKLCLPQIENVKGTEDSGTTVLLPLVIFFGLCLLSLLFIGLMYRYQRWKSKLYSIVCGKSTPEKEGELEGTTTKPLAPNPSFSPTPGFTPTLGFSPVPSSTFTSSSTYTPGDCPNFAAPRREVAPPYQGADPILATALASDPIPNPLQKWEDSAHKPQSLDTDDPATLYAVVENVPPLRWKEFVRRLGLSDHEIDRLELQNGRCLREAQYSMLATWRRRTPRREATLELLGRVLRDMDLLGCLEDIEEALCGPAALPPAPSLLR:ENST00000358945-ENST00000162749, MGMARGSLTRVPGVMGEGTQGPELSLDPDPCSPQSTPGLMKGNKLEEQDPRPLQPIPGLMEGNKLEEQDSSPPQSTPGLMKGNKREEQGLGPEPAAPQQPTAEEEALIEFHRSYRELFEFFCNNTTIHGAIRLVCSQHNRMKTAFWAVLWLCTFGMMYWQFGLLFGEYFSYPVSLNINLNSDKLVFPAVTICTLNPYRYPEIKEELEELDRITEQTLFDLYKYSSFTTLVAGSRSRRDLRGTLPHPLQRLRVPPPPHGARRARSVASSLRDNNPQVDWKDWKIGFQLCNQNKSDCFYQTYSSGVDAVREWYRFHYINILSRLPETLPSLEEDTLGNFIFACRFNQVSCNQANYSHFHHPMYGNCYTFNDKNNSNLWMSSMPGINNGLSLMLRAEQNDFIPLLSTVTGARVMVHGQDEPAFMDDGGFNLRPGVETSISMRKETLDRLGGDYGDCTKNGSDVPVENLYPSKYTQQVCIHSCFQESMIKECGCAYIFYPRPQNVEYCDYRKHSSWGYCYYKLQVDFSSDHLGCFTKCRKPCSVTSYQLSAGYSRWPSVTSQEWVFQMLSRQNNYTVNNKRNGVAKVNIFFKELNYKTNSESPSVTILPQVLLELLVGIYPSGVIGLVPHLGDREKRDSVCPQGKYIHPQNNSICCTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCTVDRDTVCGCRKNQYRHYWSENLFQCFNCSLCLNGTVHLSCQEKQNTVCTCHAGFFLRENECVSCSNCKKSLECTKLCLPQIENVKGTEDSGTTVLLPLVIFFGLCLLSLLFIGLMYRYQRWKSKLYSIVCGKSTPEKEGELEGTTTKPLAPNPSFSPTPGFTPTLGFSPVPSSTFTSSSTYTPGDCPNFAAPRREVAPPYQGADPILATALASDPIPNPLQKWEDSAHKPQSLDTDDPATLYAVVENVPPLRWKEFVRRLGLSDHEIDRLELQNGRCLREAQYSMLATWRRRTPRREATLELLGRVLRDMDLLGCLEDIEEALCGPAALPPAPSLLR:ENST00000360168-ENST00000162749, 	11:ENST00000360168, 12:ENST00000358945,ENST00000228916, 	Intron:ENST00000162749, 	CDS:ENST00000358945,ENST00000360168,ENST00000228916, 	CDS:ENST00000162749, 	NO_DOMAIN:ENST00000358945, Topological domain=Cytoplasmic;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P37089,Topological domain=Extracellular;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P37089,:ENST00000228916, Topological domain=Cytoplasmic;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P37089,Topological domain=Extracellular;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P37089,Topological domain=Cytoplasmic;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P37089,:ENST00000360168, 	NO_DOMAIN:ENST00000358945,ENST00000360168,ENST00000228916, 	Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=TNFR-Cys 1,Repeat=TNFR-Cys 2,Repeat=TNFR-Cys 3,Repeat=TNFR-Cys 4,Domain=Death;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00064,Region=N-SMase activation domain (NSD),:ENST00000162749, 	NO_DOMAIN:ENST00000162749, 
0.0002	4250	SRR064287	chimerascan	2	0	12	3	42631957	42632050	72423751	72495774	-	-	YAF2	RYBP	42631957	72495774	uc010skp.1|	uc003dpe.2|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000327791,	UnSpec,	UnSpec 	1:ENST00000327791, 	8:ENST00000327791, 	-1:UnSpec, 	-1:UnSpec, 	MGDKKSPT:ENST00000327791-UnSpec, 	1:ENST00000327791, 	-1:UnSpec, 	CDS:ENST00000327791, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000327791, 	DOMAIN_UNK:ENST00000327791, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0045	4251	SRR064287	chimerascan	2	0	7	7	76139745	76157197	102178366	102182109	+	-	UPK3B	RASA4,POLR2J3,POLR2J2,UPLP	76157197	102182109	uc003ufq.2|uc003ufo.2|	uc010lid.1|uc011klb.1|uc003vai.2|uc011kku.1|uc011kkw.1|uc003vah.2|uc010lij.1|uc003uzw.2|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000379357,	InFrame 	-1:UnSpec, 	-1:UnSpec, 	38:ENST00000379357, 	263:ENST00000379357, 	AAPEHISYVPQLSNDTLAGRLTLSTFTLEQPLGQFSSHNISDLDTIWLVVALSNATQSFTAPRTNQDIPAPANFSQRGYYLTLRANRVLYQTRGQLHVLRVGNDTHCQPTKIGCNHPLPGPGPYRVKFLVMNDEGPVAETKWSSDTRLQQAQALRAVPGPQSPGTVVIIAILSILLAVLLTVLLAVLIYTCFNSCRSTSLSGPEEAGSVRRYTTHLAFSTPAEGAS:UnSpec-ENST00000379357, 	-1:UnSpec, 	Intron:ENST00000379357, 	Intergenic:UnSpec, 	CDS:ENST00000379357, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000379357, 	DOMAIN_UNK:ENST00000379357, 
0.9919	4252	SRR064287	chimerascan	2	0	9	9	123719563	123812554	96289437	96293687	-	+	C5	FAM120A,C9orf10	123719563	96289437	uc004bkv.2|	uc004atv.2|uc004atz.2|uc010mrf.1|uc004aty.2|uc004atw.2|uc004atx.2|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000223642,	ENST00000333936,ENST00000277165,	InFrame 	1:ENST00000223642, 	1587:ENST00000223642, 	501:ENST00000333936, 473:ENST00000277165, 	1146:ENST00000333936, 1118:ENST00000277165, 	MGLLGILCFLIFLGKTWGQEQTYVISAPKIFRVGASENIVIQVYGYTEAFDATISIKSYPDKKFSYSSGHVHLSSENKFQNSAILTIQPKQLPGGQNPVSYVYLEVVSKHFSKSKRMPITYDNGFLFIHTDKPVYTPDQSVKVRVYSLNDDLKPAKRETVLTFIDPEGSEVDMVEEIDHIGIISFPDFKIPSNPRYGMWTIKAKYKEDFSTTGTAYFEVKEYVLPHFSVSIEPEYNFIGYKNFKNFEITIKARYFYNKVVTEADVYITFGIREDLKDDQKEMMQTAMQNTMLINGIAQVTFDSETAVKELSYYSLEDLNNKYLYIAVTVIESTGGFSEEAEIPGIKYVLSPYKLNLVATPLFLKPGIPYPIKVQVKDSLDQLVGGVPVTLNAQTIDVNQETSDLDPSKSVTRVDDGVASFVLNLPSGVTVLEFNVKTDAPDLPEENQAREGYRAIAYSSLSQSYLYIDWTDNHKALLVGEHLNIIVTPKSPYIDKITHYNYLILSKGKIIHFGTREKFSDASYQSINIPVTQNMVPSSRLLVYYIVTGEQTAELVSDSVWLNIEEKCGNQLQVHLSPDADAYSPGQTVSLNMATGMDSWVALAAVDSAVYGVQRGAKKPLERVFQFLEKSDLGCGAGGGLNNANVFHLAGLTFLTNANADDSQENDEPCKEILRPRRTLQKKIEEIAAKYKHSVVKKCCYDGACVNNDETCEQRAARISLGPRCIKAFTECCVVASQLRANISHKDMQLGRLHMKTLLPVSKPEIRSYFPESWLWEVHLVPRRKQLQFALPDSLTTWEIQGVGISNTGICVADTVKAKVFKDVFLEMNIPYSVVRGEQIQLKGTVYNYRTSGMQFCVKMSAVEGICTSESPVIDHQGTKSSKCVRQKVEGSSSHLVTFTVLPLEIGLHNINFSLETWFGKEILVKTLRVVPEGVKRESYSGVTLDPRGIYGTISRRKEFPYRIPLDLVPKTEIKRILSVKGLLVGEILSAVLSQEGINILTHLPKGSAEAELMSVVPVFYVFHYLETGNHWNIFHSDPLIEKQKLKKKLKEGMLSIMSYRNADYSYSVWKGGSASTWLTAFALRVLGQVNKYVEQNQNSICNSLLWLVENYQLDNGSFKENSQYQPIKLQGTLPVEARENSLYLTAFTVIGIRKAFDICPLVKIDTALIKADNFLLENTLPAQSTFTLAISAYALSLGDKTHPQFRSIVSALKREALVKGNPPIYRFWKDNLQHKDSSVPNTGTARMVETTAYALLTSLNLKDINYVNPVIKWLSEEQRYGGGFYSTQDTINAIEGLTEYSLLVKQLRLSMDIDVSYKHKGALHNYKMTDKNFLGRPVEVLLNDDLIVSTGFGSGLATVHVTTVVHKTSTSEEVCSFYLKIDTQDIEASHYRGYGNSDYKRIVACASYKPSREESSSGSSHAVMDISLPTGISANEEDLKALVEGVDQLFTDYQIKDGHVILQLNSIPSSDFLCVRFRIFELFEVGFLSPATFTVYEYHRPDKQCTMFYSTSNIKIQKVCEGAACKCVEADCGQMQEELDLTISAETRKQTACKPEIAYAYKVSITSITVENVFVKYKATLLDIYKTHISGNKIGWEKTGSHSEPQARGDPGDQTKAEGSSTASSGSQLAEGKGSQMGTVQPIPCLLSMPTRNHMDITTPPLPPVAPEVLRVAEHRHKKGLMYPYIFHVLTKGEIKIAVSIEDEANKDLPPAALLYRPVRQYVYGVLFSLAESRKKTERLAFRKNRLPPEFSPVIIKEWAAYKGKSPQTPELVEALAFREWTCPNLKRLWLGKAVEDKNRRMRAFLACMRSDTPAMLNPANVPTHLMVLCCVLRYMVQWPGARILRRQELDAFLAQALSPKLYEPDQLQELKIENLDPRGIQLSALFMSGVDMALFANDACGQPIPWEHCCPWMYFDGKLFQSKLLKASREKTPLIDLCDGQADQAAKVEKMRQSVLEGLSFSRQSHTLPFPPPPALPFYPASAYPRHFGPVPPSQGRGRGFAGVCGFGGPYGETVATGPYRAFRVAAASGHCGAFSGSDSSRTSKSQGGVQPIPSQGGKLEIAGTVVGHWAGSRRGRGGRGPFPLQVVSVGGPARGRPRGVISTPVIRTFGRGGRYYGRGYKNQAAIQGRPPYAASAEEVAKELKSKSGESKSSAMSSDGSLAENGVMAEEKPAPQMNGSTGDARAPSHSESALNNDSKTCNTNPHLNALSTDSACRREAALEAAVLNKEE:ENST00000223642-ENST00000333936,ENST00000223642-ENST00000277165, 	39:ENST00000223642, 	8:ENST00000277165, 9:ENST00000333936, 	CDS:ENST00000223642, 	CDS:ENST00000333936,ENST00000277165, 	Domain=Anaphylatoxin-like;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00022,Domain=NTR;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00295,Region=Involved in C5AR1 binding;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:9553099;Dbxref=PMID:9553099,:ENST00000223642, 	NO_DOMAIN:ENST00000223642, 	NO_DOMAIN:ENST00000333936, Region=RNA binding,:ENST00000277165, 	NO_DOMAIN:ENST00000333936, Region=Interaction with YES1%2C SRC and FYN,:ENST00000277165, 
0.0002	4253	SRR064287	chimerascan	2	0	7	7	76139745	76157197	43980494	44027846	+	-	UPK3B	POLR2J4	76157197	44027846	uc003ufq.2|uc003ufo.2|	uc003tjc.2|uc010kxw.2|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE																
0.9894	4295	SRR064438	chimerascan	40	33	17	17	35479453	35656692	37366790	37374426	-	-	ACACA	STAC2	35479453	37374426	uc010wdc.1|uc002hnn.2|uc010cuy.2|uc002hnl.2|uc002hno.2|uc002hnl.2|uc002hnn.2|uc002hnk.2|uc002hno.2|uc010cuy.2|uc002hnm.2|uc002hnk.2|uc002hnm.2|uc010wdc.1|	uc010cvt.2|uc002hrs.2|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000353139,ENST00000335166,	ENST00000333461,	InFrame 	1:ENST00000353139,ENST00000335166, 	2045:ENST00000353139, 1930:ENST00000335166, 	30:ENST00000333461, 	411:ENST00000333461, 	MSGLHLVKQGRDRKKIDSQRDFTVASPAEFVTRFGGNKVIEKVLIANNGIAAVKCMRSIRRWSYEMFRNERAIRFVVMVTPEDLKANAEYIKMADHYVPVPGGPNNNNYANVELILDIAKRIPVQAVWAGWGHASENPKLPELLLKNGIAFMGPPSQAMWALGDKIASSIVAQTAGIPTLPWSGSGLRVDWQENDFSKRILNVPQELYEKGYVKDVDDGLQAAEEVGYPVMIKASEGGGGKGIRKVNNADDFPNLFRQVQAEVPGSPIFVMRLAKQSRHLEVQILADQYGNAISLFGRDCSVQRRHQKIIEEAPATIATPAVFEHMEQCAVKLAKMVGYVSAGTVEYLYSQDGSFYFLELNPRLQVEHPCTEMVADVNLPAAQLQIAMGIPLYRIKDIRMMYGVSPWGDSPIDFEDSAHVPCPRGHVIAARITSENPDEGFKPSSGTVQELNFRSNKNVWGYFSVAAAGGLHEFADSQFGHCFSWGENREEAISNMVVALKELSIRGDFRTTVEYLIKLLETESFQMNRIDTGWLDRLIAEKVQAERPDTMLGVVCGALHVADVSLRNSVSNFLHSLERGQVLPAHTLLNTVDVELIYEGVKYVLKVTRQSPNSYVVIMNGSCVEVDVHRLSDGGLLLSYDGSSYTTYMKEEVDRYRITIGNKTCVFEKENDPSVMRSPSAGKLIQYIVEDGGHVFAGQCYAEIEVMKMVMTLTAVESGCIHYVKRPGAALDPGCVLAKMQLDNPSKVQQAELHTGSLPRIQSTALRGEKLHRVFHYVLDNLVNVMNGYCLPDPFFSSKVKDWVERLMKTLRDPSLPLLELQDIMTSVSGRIPPNVEKSIKKEMAQYASNITSVLCQFPSQQIANILDSHAATLNRKSEREVFFMNTQSIVQLVQRYRSGIRGHMKAVVMDLLRQYLRVETQFQNGHYDKCVFALREENKSDMNTVLNYIFSHAQVTKKNLLVTMLIDQLCGRDPTLTDELLNILTELTQLSKTTNAKVALRARQVLIASHLPSYELRHNQVESIFLSAIDMYGHQFCIENLQKLILSETSIFDVLPNFFYHSNQVVRMAALEVYVRRAYIAYELNSVQHRQLKDNTCVVEFQFMLPTSHPNRGNIPTLNRMSFSSNLNHYGMTHVASVSDVLLDNSFTPPCQRMGGMVSFRTFEDFVRIFDEVMGCFSDSPPQSPTFPEAGHTSLYDEDKVPRDEPIHILNVAIKTDCDIEDDRLAAMFREFTQQNKATLVDHGIRRLTFLVAQKDFRKQVNYEVDRRFHREFPKFFTFRARDKFEEDRIYRHLEPALAFQLELNRMRNFDLTAIPCANHKMHLYLGAAKVEVGTEVTDYRFFVRAIIRHSDLVTKEASFEYLQNEGERLLLEAMDELEVAFNNTNVRTDCNHIFLNFVPTVIMDPSKIEESVRSMVMRYGSRLWKLRVLQAELKINIRLTPTGKAIPIRLFLTNESGYYLDISLYKEVTDSRTAQIMFQAYGDKQGPLHGMLINTPYVTKDLLQSKRFQAQSLGTTYIYDIPEMFRQSLIKLWESMSTQAFLPSPPLPSDMLTYTELVLDDQGQLVHMNRLPGGNEIGMVAWKMTFKSPEYPEGRDIIVIGNDITYRIGSFGPQEDLLFLRASELARAEGIPRIYVSANSGARIGLAEEIRHMFHVAWVDPEDPYKGYRYLYLTPQDYKRVSALNSVHCEHVEDEGESRYKITDIIGKEEGIGPENLRGSGMIAGESSLAYNEIITISLVTCRAIGIGAYLVRLGQRTIQVENSHLILTGAGALNKVLGREVYTSNNQLGGIQIMHNNGVTHCTVCDDFEGVFTVLHWLSYMPKSVHSSVPLLNSKDPIDRIIEFVPTKTPYDPRWMLAGRPHPTQKGQWLSGFFDYGSFSEIMQPWAQTVVVGRARLGGIPVGVVAVETRTVELSIPADPANLDSEAKLQRFKRSLSLKTILRSKSLENFFLRSGSELKCPTEVLLTPPTPLPPPSPPPTASDRGLATPSPSPCPVPRPLAALKPVRLHSFQEHVFKRASPCELCHQLIVGNSKQGLRCKMCKVSVHLWCSEEISHQQCPGKTSTSFRRNFSSPLLVHEPPPVCATSKESPPTGDSGKVDPVYETLRYGTSLALMNRSSFSSTSESPTRSLSERDELTEDGEGSIRSSEEGPGDSASPVFTAPAESEGPGPEEKSPGQQLPKATLRKDVGPMYSYVALYKFLPQENNDLALQPGDRIMLVDDSNEDWWKGKIGDRVGFFPANFVQRVRPGENVWRCCQPFSGNKEQGYMSLKENQICVGVGRSKDADGFIRVSSGKKRGLVPVDALTEI:ENST00000335166-ENST00000333461, MWWSTLMSILRARSFWKWISTQTVRIIRAVRAHFGGIMDEPSPLAQPLELNQHSRFIIGSVSEDNSEDEISNLVKLDLLEEKEGSLSPASVGSDTLSDLGISSLQDGLALHIRSSMSGLHLVKQGRDRKKIDSQRDFTVASPAEFVTRFGGNKVIEKVLIANNGIAAVKCMRSIRRWSYEMFRNERAIRFVVMVTPEDLKANAEYIKMADHYVPVPGGPNNNNYANVELILDIAKRIPVQAVWAGWGHASENPKLPELLLKNGIAFMGPPSQAMWALGDKIASSIVAQTAGIPTLPWSGSGLRVDWQENDFSKRILNVPQELYEKGYVKDVDDGLQAAEEVGYPVMIKASEGGGGKGIRKVNNADDFPNLFRQVQAEVPGSPIFVMRLAKQSRHLEVQILADQYGNAISLFGRDCSVQRRHQKIIEEAPATIATPAVFEHMEQCAVKLAKMVGYVSAGTVEYLYSQDGSFYFLELNPRLQVEHPCTEMVADVNLPAAQLQIAMGIPLYRIKDIRMMYGVSPWGDSPIDFEDSAHVPCPRGHVIAARITSENPDEGFKPSSGTVQELNFRSNKNVWGYFSVAAAGGLHEFADSQFGHCFSWGENREEAISNMVVALKELSIRGDFRTTVEYLIKLLETESFQMNRIDTGWLDRLIAEKVQAERPDTMLGVVCGALHVADVSLRNSVSNFLHSLERGQVLPAHTLLNTVDVELIYEGVKYVLKVTRQSPNSYVVIMNGSCVEVDVHRLSDGGLLLSYDGSSYTTYMKEEVDRYRITIGNKTCVFEKENDPSVMRSPSAGKLIQYIVEDGGHVFAGQCYAEIEVMKMVMTLTAVESGCIHYVKRPGAALDPGCVLAKMQLDNPSKVQQAELHTGSLPRIQSTALRGEKLHRVFHYVLDNLVNVMNGYCLPDPFFSSKVKDWVERLMKTLRDPSLPLLELQDIMTSVSGRIPPNVEKSIKKEMAQYASNITSVLCQFPSQQIANILDSHAATLNRKSEREVFFMNTQSIVQLVQRYRSGIRGHMKAVVMDLLRQYLRVETQFQNGHYDKCVFALREENKSDMNTVLNYIFSHAQVTKKNLLVTMLIDQLCGRDPTLTDELLNILTELTQLSKTTNAKVALRARQVLIASHLPSYELRHNQVESIFLSAIDMYGHQFCIENLQKLILSETSIFDVLPNFFYHSNQVVRMAALEVYVRRAYIAYELNSVQHRQLKDNTCVVEFQFMLPTSHPNRGNIPTLNRMSFSSNLNHYGMTHVASVSDVLLDNSFTPPCQRMGGMVSFRTFEDFVRIFDEVMGCFSDSPPQSPTFPEAGHTSLYDEDKVPRDEPIHILNVAIKTDCDIEDDRLAAMFREFTQQNKATLVDHGIRRLTFLVAQKDFRKQVNYEVDRRFHREFPKFFTFRARDKFEEDRIYRHLEPALAFQLELNRMRNFDLTAIPCANHKMHLYLGAAKVEVGTEVTDYRFFVRAIIRHSDLVTKEASFEYLQNEGERLLLEAMDELEVAFNNTNVRTDCNHIFLNFVPTVIMDPSKIEESVRSMVMRYGSRLWKLRVLQAELKINIRLTPTGKAIPIRLFLTNESGYYLDISLYKEVTDSRTAQIMFQAYGDKQGPLHGMLINTPYVTKDLLQSKRFQAQSLGTTYIYDIPEMFRQSLIKLWESMSTQAFLPSPPLPSDMLTYTELVLDDQGQLVHMNRLPGGNEIGMVAWKMTFKSPEYPEGRDIIVIGNDITYRIGSFGPQEDLLFLRASELARAEGIPRIYVSANSGARIGLAEEIRHMFHVAWVDPEDPYKGYRYLYLTPQDYKRVSALNSVHCEHVEDEGESRYKITDIIGKEEGIGPENLRGSGMIAGESSLAYNEIITISLVTCRAIGIGAYLVRLGQRTIQVENSHLILTGAGALNKVLGREVYTSNNQLGGIQIMHNNGVTHCTVCDDFEGVFTVLHWLSYMPKSVHSSVPLLNSKDPIDRIIEFVPTKTPYDPRWMLAGRPHPTQKGQWLSGFFDYGSFSEIMQPWAQTVVVGRARLGGIPVGVVAVETRTVELSIPADPANLDSEAKLQRFKRSLSLKTILRSKSLENFFLRSGSELKCPTEVLLTPPTPLPPPSPPPTASDRGLATPSPSPCPVPRPLAALKPVRLHSFQEHVFKRASPCELCHQLIVGNSKQGLRCKMCKVSVHLWCSEEISHQQCPGKTSTSFRRNFSSPLLVHEPPPVCATSKESPPTGDSGKVDPVYETLRYGTSLALMNRSSFSSTSESPTRSLSERDELTEDGEGSIRSSEEGPGDSASPVFTAPAESEGPGPEEKSPGQQLPKATLRKDVGPMYSYVALYKFLPQENNDLALQPGDRIMLVDDSNEDWWKGKIGDRVGFFPANFVQRVRPGENVWRCCQPFSGNKEQGYMSLKENQICVGVGRSKDADGFIRVSSGKKRGLVPVDALTEI:ENST00000353139-ENST00000333461, 	49:ENST00000353139, 48:ENST00000335166, 	Intron:ENST00000333461, 	CDS:ENST00000353139,ENST00000335166, 	CDS:ENST00000333461, 	NO_DOMAIN:ENST00000353139,ENST00000335166, 	NO_DOMAIN:ENST00000353139,ENST00000335166, 	Domain=SH3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00192,:ENST00000333461, 	NO_DOMAIN:ENST00000333461, 
0.0001	4296	SRR064438	chimerascan	32	23	17	17	57970443	57970686	47007461	47021337	+	-	RPS6KB1	SNF8	57970686	47021337	uc010ddj.1|uc010wom.1|uc010won.1|uc010ddj.1|uc010won.1|uc002ixy.2|uc002ixy.2|	uc002iok.2|uc002ioj.2|uc002iok.2|uc002ioj.2|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	5p_KINASE	ENST00000406116,ENST00000225577,ENST00000425292,ENST00000393021,	ENST00000507302,ENST00000514929,ENST00000502492,ENST00000290330,	FrameShift 	1:ENST00000406116,ENST00000225577,ENST00000425292,ENST00000393021, 	47:ENST00000406116,ENST00000225577,ENST00000425292,ENST00000393021, 	-1:ENST00000507302,ENST00000514929,ENST00000502492,ENST00000290330, 	-1:ENST00000507302,ENST00000514929,ENST00000502492,ENST00000290330, 	MRRRRRRDGFYPAPDFRDREAEDMAGVFDIDLDQPEDAGSEDELEEGGPSIRSEGRSWLRTS*:ENST00000406116-ENST00000507302,ENST00000406116-ENST00000514929,ENST00000406116-ENST00000502492,ENST00000425292-ENST00000507302,ENST00000225577-ENST00000514929,ENST00000425292-ENST00000290330,ENST00000225577-ENST00000507302,ENST00000425292-ENST00000514929,ENST00000393021-ENST00000507302,ENST00000425292-ENST00000502492,ENST00000393021-ENST00000514929,ENST00000406116-ENST00000290330,ENST00000225577-ENST00000290330,ENST00000393021-ENST00000290330,ENST00000225577-ENST00000502492,ENST00000393021-ENST00000502492, 	Intron:ENST00000406116,ENST00000225577,ENST00000425292,ENST00000393021, 	Intron:ENST00000507302,ENST00000514929,ENST00000502492,ENST00000290330, 	CDS:ENST00000406116,ENST00000225577,ENST00000425292,ENST00000393021, 	CDS:ENST00000507302,ENST00000514929,ENST00000502492,ENST00000290330, 	NO_DOMAIN:ENST00000406116,ENST00000225577,ENST00000425292,ENST00000393021, 	Domain=Protein kinase;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00159,Domain=AGC-kinase C-terminal,Region=Autoinhibitory domain,:ENST00000406116,ENST00000225577,ENST00000393021, NO_DOMAIN:ENST00000425292, 	NO_DOMAIN:ENST00000507302,ENST00000514929,ENST00000502492,ENST00000290330, 	NO_DOMAIN:ENST00000507302,ENST00000514929,ENST00000502492,ENST00000290330, 
0.0002	4297	SRR064438	chimerascan	20	10	20	17	56964245	56964573	37921201	37934020	+	-	VAPB,VAP-B	IKZF3	56964573	37934020	uc002xzb.2|uc002xzc.2|uc002xza.2|uc010zzo.1|	uc010cwd.2|uc002hsu.2|uc002htb.2|uc002hsx.2|uc010cwf.2|uc002hsy.2|uc002htd.2|uc010cwh.2|uc002htc.2|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000520497,ENST00000475243,ENST00000395802,	ENST00000351680,ENST00000346243,ENST00000377944,ENST00000377952,ENST00000488188,ENST00000377958,ENST00000346872,ENST00000394189,ENST00000467757,ENST00000377945,ENST00000350532,	FrameShift 	1:ENST00000520497,ENST00000475243,ENST00000395802, 	19:ENST00000520497,ENST00000475243,ENST00000395802, 	-1:ENST00000351680,ENST00000346243,ENST00000377944,ENST00000377952,ENST00000488188,ENST00000377958,ENST00000346872,ENST00000394189,ENST00000467757,ENST00000377945,ENST00000350532, 	-1:ENST00000351680,ENST00000346243,ENST00000377944,ENST00000377952,ENST00000488188,ENST00000377958,ENST00000346872,ENST00000394189,ENST00000467757,ENST00000377945,ENST00000350532, 	MAKVEQVLSLEPQHELKFRGQVRRQDTSKQRWEVKELSYWTD*:ENST00000475243-ENST00000377952,ENST00000475243-ENST00000346243,ENST00000395802-ENST00000346872,ENST00000475243-ENST00000394189,ENST00000520497-ENST00000346243,ENST00000395802-ENST00000377958,ENST00000395802-ENST00000351680,ENST00000475243-ENST00000351680,ENST00000520497-ENST00000488188,ENST00000395802-ENST00000346243,ENST00000475243-ENST00000467757,ENST00000395802-ENST00000467757,ENST00000395802-ENST00000350532,ENST00000395802-ENST00000377944,ENST00000520497-ENST00000346872,ENST00000475243-ENST00000377944,ENST00000520497-ENST00000467757,ENST00000520497-ENST00000377958,ENST00000520497-ENST00000350532,ENST00000475243-ENST00000488188,ENST00000475243-ENST00000377945,ENST00000395802-ENST00000377952,ENST00000475243-ENST00000350532,ENST00000520497-ENST00000377944,ENST00000475243-ENST00000346872,ENST00000520497-ENST00000394189,ENST00000520497-ENST00000377952,ENST00000475243-ENST00000377958,ENST00000395802-ENST00000488188,ENST00000520497-ENST00000377945,ENST00000395802-ENST00000394189,ENST00000520497-ENST00000351680,ENST00000395802-ENST00000377945, 	Intron:ENST00000520497,ENST00000475243,ENST00000395802, 	Intron:ENST00000351680,ENST00000346243,ENST00000377944,ENST00000377952,ENST00000488188,ENST00000377958,ENST00000346872,ENST00000394189,ENST00000467757,ENST00000377945,ENST00000350532, 	CDS:ENST00000520497,ENST00000475243,ENST00000395802, 	CDS:ENST00000351680,ENST00000346243,ENST00000377944,ENST00000377952,ENST00000488188,ENST00000377958,ENST00000346872,ENST00000394189,ENST00000467757,ENST00000377945,ENST00000350532, 	Domain=MSP;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50202,:ENST00000520497, Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=MSP;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00132,:ENST00000475243,ENST00000395802, 	NO_DOMAIN:ENST00000520497,ENST00000475243,ENST00000395802, 	NO_DOMAIN:ENST00000351680,ENST00000346243,ENST00000377944,ENST00000377952,ENST00000488188,ENST00000377958,ENST00000346872,ENST00000394189,ENST00000467757,ENST00000377945,ENST00000350532, 	NO_DOMAIN:ENST00000351680,ENST00000346243,ENST00000377944,ENST00000377952,ENST00000488188,ENST00000377958,ENST00000346872,ENST00000394189,ENST00000467757,ENST00000377945,ENST00000350532, 
0.0002	4298	SRR064438	chimerascan	19	11	17	17	48943419	48943706	35874901	35880751	-	-	TOB1	SYNRG	48943419	35880751	uc010wmy.1|	uc002hod.2|uc002hoc.2|uc010wdf.1|uc010wde.1|uc002hob.2|uc010wdg.1|uc002hod.2|uc002hoe.2|uc002hoe.2|uc002hob.2|uc002hoa.2|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000268957,	ENST00000339208,	FrameShift 	-1:ENST00000268957, 	-1:ENST00000268957, 	-1:ENST00000339208, 	-1:ENST00000339208, 	MYGGFVPEEHSWSTRARPVDTLLLDFPLFPVRV*:ENST00000268957-ENST00000339208, 	Intron:ENST00000268957, 	Intron:ENST00000339208, 	5UTR:ENST00000268957, 	CDS:ENST00000339208, 	DOMAIN_UNK:ENST00000268957, 	DOMAIN_UNK:ENST00000268957, 	NO_DOMAIN:ENST00000339208, 	NO_DOMAIN:ENST00000339208, 
0.0004	4299	SRR064438	chimerascan	16	5	20	20	45852970	45867893	34078463	34099802	-	+	ZMYND8,KIAA1125	CEP250	45852970	34078463	uc002xtc.1|uc002xtd.1|uc002xsx.1|uc002xtf.1|uc010zxz.1|uc002xss.2|uc010zxy.1|uc002xsr.1|uc010zya.1|uc002xsw.1|uc002xsv.1|uc002xsu.1|uc002xta.1|uc002xtb.1|uc002xst.1|uc002xte.1|uc002xsy.1|uc010ghq.1|uc010ghr.1|uc002xsz.1|	uc010zve.1|uc002xcm.2|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	5p_KINASE	ENST00000311275,ENST00000471951,ENST00000396281,ENST00000262975,	ENST00000356095,ENST00000397527,	FrameShift 	1:ENST00000311275,ENST00000471951,ENST00000396281,ENST00000262975, 	1020:ENST00000262975, 1086:ENST00000471951, 1065:ENST00000311275,ENST00000396281, 	-1:ENST00000356095,ENST00000397527, 	-1:ENST00000356095,ENST00000397527, 	MDISTRSKDPGSAERTAQKRKFPSPPHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKEQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYLAACQKRDNWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVENIRRKFGVFNYSPFRTPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVKLNFDMTASPKILMSKPVLSGGTGRRISLSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSSKFQTSSQKWHMQKMQRQQQQQQQQNQQQQPQSSQGTRYQTRQAVKAVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSRRSAPGTSRSWQRLWRA*:ENST00000396281-ENST00000397527,ENST00000396281-ENST00000356095,ENST00000311275-ENST00000356095,ENST00000311275-ENST00000397527, MDISTRSKDPGSAERTAQKRKFPSPPHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKEQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYLAACQKRDNWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVENIRRKFGVFNYSPFRTPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVKLNFDMTASPKILMSKPVLSGGTGRRISLSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLGHRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSRRSAPGTSRSWQRLWRA*:ENST00000262975-ENST00000397527,ENST00000262975-ENST00000356095, MHPQSLAEEEIKTEQEVVEGMDISTRSKDPGSAERTAQKRKFPSPPHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKEQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYLAACQKRDNWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVENIRRKFGVFNYSPFRTPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVKLNFDMTASPKILMSKPVLSGGTGRRISLSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLGHRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSSKFQTSSQKWHMQKMQRQQQQQQQQNQQQQPQSSQGTRYQTRQAVKAVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSRRSAPGTSRSWQRLWRA*:ENST00000471951-ENST00000356095,ENST00000471951-ENST00000397527, 	19:ENST00000311275,ENST00000471951,ENST00000396281, 20:ENST00000262975, 	22:ENST00000356095, 21:ENST00000397527, 	CDS:ENST00000311275,ENST00000471951,ENST00000396281,ENST00000262975, 	CDS:ENST00000356095,ENST00000397527, 	Domain=Bromo;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00035,Domain=PWWP;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00162,:ENST00000311275,ENST00000471951,ENST00000396281,ENST00000262975, 	Region=Interacts with PRKCB1,:ENST00000311275,ENST00000471951,ENST00000396281,ENST00000262975, 	NO_DOMAIN:ENST00000356095,ENST00000397527, 	NO_DOMAIN:ENST00000356095,ENST00000397527, 
0.0002	4300	SRR064438	chimerascan	10	3	17	17	37607291	37607527	53218671	53241449	-	+	MED1	STXBP4	37607291	53218671	uc002hru.2|uc010wee.1|uc002hrv.3|	uc010dcd.1|uc002iuf.1|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000300651,ENST00000394287,	ENST00000376352,ENST00000434978,	FrameShift 	1:ENST00000300651,ENST00000394287, 	8:ENST00000300651,ENST00000394287, 	-1:ENST00000376352,ENST00000434978, 	-1:ENST00000376352,ENST00000434978, 	MKAQGETEFTLWVGGSLHSRWNQVLHQSCNTDYILDPSRDECPESISLRGE*:ENST00000394287-ENST00000434978,ENST00000394287-ENST00000376352,ENST00000300651-ENST00000434978,ENST00000300651-ENST00000376352, 	1:ENST00000300651,ENST00000394287, 	16:ENST00000434978, 17:ENST00000376352, 	CDS:ENST00000300651,ENST00000394287, 	CDS:ENST00000376352,ENST00000434978, 	Region=Interaction with the Mediator complex and THRA,:ENST00000300651,ENST00000394287, 	Region=Interaction with ESR1,Region=Interaction with the Mediator complex,Region=Interaction with the Mediator complex,Region=Interaction with THRA,Region=Interaction with VDR,Region=Interaction with PPARGC1A and THRA,Region=Interaction with ESR1,Region=Interaction with GATA1;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24245781;Dbxref=PMID:24245781,Region=Interaction with TP53,:ENST00000300651,ENST00000394287, 	NO_DOMAIN:ENST00000376352,ENST00000434978, 	Domain=PDZ (DHR);Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50106,Domain=WW;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50020,:ENST00000434978, Domain=PDZ;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=WW;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00224,:ENST00000376352, 
0.0002	4301	SRR064438	chimerascan	10	0	M	M	12338	14645	1709	4262	+	+	MTND5	TVAS5	14645	1709	uc004cox.3|	uc004cos.3|	breast_cancer	SRR064286,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,	NO_KINASE																
0.0004	4302	SRR064438	chimerascan	9	5	20	19	56884771	56886178	17256207	17324103	+	+	RAB22A	MYO9B	56886178	17256207	uc002xyz.2|uc002xyz.2|	uc002nfi.2|uc010eak.2|uc002nfj.1|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000244040,	ENST00000397274,ENST00000319396,	FrameShift 	1:ENST00000244040, 	39:ENST00000244040, 	-1:ENST00000397274,ENST00000319396, 	-1:ENST00000397274,ENST00000319396, 	MALRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGLLEMPRQPTTTTPAGLGNSSKSAT*:ENST00000244040-ENST00000319396,ENST00000244040-ENST00000397274, 	Intron:ENST00000244040, 	2:ENST00000397274,ENST00000319396, 	CDS:ENST00000244040, 	CDS:ENST00000397274,ENST00000319396, 	NO_DOMAIN:ENST00000244040, 	NO_DOMAIN:ENST00000244040, 	NO_DOMAIN:ENST00000397274,ENST00000319396, 	Domain=Ras-associating;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00166,Domain=Myosin motor,Domain=IQ 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=IQ 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=IQ 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=IQ 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=Rho-GAP;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00172,Region=Actin-binding;Ontology_term=ECO:0000305;evidence=ECO:0000305,Region=Neck or regulatory domain;Ontology_term=ECO:0000305;evidence=ECO:0000305,Region=Tail;Ontology_term=ECO:0000305;evidence=ECO:0000305,Region=Interaction with RHOA;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:26529257;Dbxref=PMID:26529257,:ENST00000397274, NO_DOMAIN:ENST00000319396, 
0.0002	4303	SRR064438	chimerascan	8	6	17	17	37595418	37607527	48548389	48552200	-	+	MED1	UNQ493	37595418	48548389	uc002hru.2|uc002hrv.3|	uc010dbt.1|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000300651,	UnSpec,	UnSpec 	1:ENST00000300651, 	142:ENST00000300651, 	-1:UnSpec, 	-1:UnSpec, 	MKAQGETEESEKLSKMSSLLERLHAKFNQNRPWSETIKLVRQVMEKRVVMSSGGHQHLVSCLETLQKALKVTSLPAMTDRLESIARQNGLGSHLSASGTECYITSDMFYVEVQLDPAGQLCDVKVAHHGENPVSCPELVQQL:ENST00000300651-UnSpec, 	6:ENST00000300651, 	-1:UnSpec, 	CDS:ENST00000300651, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000300651, 	DOMAIN_UNK:ENST00000300651, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4304	SRR064438	chimerascan	7	0	7	7	77325213	77326662	77313168	77314643	-	-	BC037783	AF290475	77325213	77314643	uc003ugj.1|	uc003ugk.3|	breast_cancer	SRR064286,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,	NO_KINASE																
0.0002	4305	SRR064438	chimerascan	7	5	7	7	45808259	45808617	56078746	56088924	-	-	SEPT13	PSPH	45808259	56088924	uc003tnf.3|uc003tnh.2|	uc003trg.2|uc003tri.2|uc003trh.2|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0003	4306	SRR064438	chimerascan	6	3	20	20	62496590	62500794	62559688	62565394	+	+	TPD52L2	DNAJC5,FLJ00118	62500794	62559688	uc002ygz.2|uc002ygy.2|uc002yha.2|uc002yhd.2|uc002yhb.2|uc002yhc.2|	uc002yhf.2|uc002yhg.1|uc002yhh.2|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000217121,	ENST00000360864,	FrameShift 	1:ENST00000217121, 	55:ENST00000217121, 	-1:ENST00000360864, 	-1:ENST00000360864, 	MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKDSLTWQTRDSAHCLPLGSHCTTSLGWTRTQPQMTLKSPIGSLP*:ENST00000217121-ENST00000360864, 	Intron:ENST00000217121, 	-1:ENST00000360864, 	CDS:ENST00000217121, 	5UTR:ENST00000360864, 	DOMAIN_UNK:ENST00000217121, 	DOMAIN_UNK:ENST00000217121, 	DOMAIN_UNK:ENST00000360864, 	DOMAIN_UNK:ENST00000360864, 
0.0002	4307	SRR064438	chimerascan	8	2	16	16	70024500	70099851	22535141	22547828	-	+	PDXDC2	LOC100132247,NPIPL3	70024500	22535141	uc002eyc.2|	uc010bxg.2|uc010vbw.1|uc010vbv.1|uc010bxi.2|	breast_cancer	SRR064437,SRR064438,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	4308	SRR064438	chimerascan	8	2	16	16	70024500	70099851	30234351	30246900	-	-	PDXDC2	NPIPL3	70024500	30246900	uc002eyc.2|	uc010vem.1|uc010vel.1|	breast_cancer	SRR064437,SRR064438,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	4309	SRR064438	chimerascan	8	2	16	16	70024500	70099851	21415198	21426406	-	-	PDXDC2	LOC23117,NPIPL3	70024500	21426406	uc002eyc.2|	uc002dix.1|uc010bws.2|uc002diu.1|uc010vbg.1|	breast_cancer	SRR064437,SRR064438,	breast_cancer,normal_tissue,	3p_KINASE	UnSpec,	ENST00000319334,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000319334, 	-1:ENST00000319334, 	GYQYSG*:UnSpec-ENST00000319334, 	-1:UnSpec, 	Intron:ENST00000319334, 	Intergenic:UnSpec, 	CDS:ENST00000319334, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000319334, 	DOMAIN_UNK:ENST00000319334, 
0.0002	4310	SRR064438	chimerascan	8	2	16	16	70024500	70099851	29496996	29506928	-	-	PDXDC2	NPIPL3	70024500	29506928	uc002eyc.2|	uc010vdr.1|	breast_cancer	SRR064437,SRR064438,	breast_cancer,normal_tissue,	NO_KINASE																
0.0003	4311	SRR064438	chimerascan	6	0	17	17	37856254	37856564	61509666	61515531	+	-	ERBB2,HER-2	CYB561	37856564	61515531	uc010wek.1|uc002hso.2|uc010cwb.2|uc002hsp.2|uc002hsn.1|	uc002jaq.2|	breast_cancer	SRR064287,SRR064438,SRR064439,SRR064440,	breast_cancer,	5p_KINASE	ENST00000269571,	ENST00000360793,	FrameShift 	1:ENST00000269571, 	24:ENST00000269571, 	-1:ENST00000360793, 	-1:ENST00000360793, 	MELAALCRWGLLLALLPPGAASTQGLSLHPHRIWNSWRRVPGHACPRGEAGPLPPATPET*:ENST00000269571-ENST00000360793, 	Intron:ENST00000269571, 	-1:ENST00000360793, 	CDS:ENST00000269571, 	5UTR:ENST00000360793, 	DOMAIN_UNK:ENST00000269571, 	DOMAIN_UNK:ENST00000269571, 	DOMAIN_UNK:ENST00000360793, 	DOMAIN_UNK:ENST00000360793, 
0.0002	4312	SRR064438	chimerascan	6	0	M	M	237	368	1709	4262	-	+	DQ582201	TVAS5	237	1709	uc004coq.3|	uc004cos.3|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0003	4313	SRR064438	chimerascan	5	3	20	20	57226328	57227143	55929088	55953518	+	+	STX16	RAE1	57227143	55929088	uc002xzi.2|uc002xzj.2|uc002xzm.2|uc010zzq.1|	uc002xyh.2|uc002xyg.2|uc002xyi.2|uc010gis.1|uc002xyh.2|uc010gis.1|uc010git.1|uc002xyg.2|uc002xyi.2|uc010git.1|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000355957,	ENST00000371242,	FrameShift 	1:ENST00000355957, 	27:ENST00000355957, 	-1:ENST00000371242, 	-1:ENST00000371242, 	MATRRLTDAFLLLRNNSIQNRQLLAEQVQNEPVWNNLRFWNQWDQHVWQCNYRQSQSHEGY*:ENST00000355957-ENST00000371242, 	Intron:ENST00000355957, 	-1:ENST00000371242, 	CDS:ENST00000355957, 	5UTR:ENST00000371242, 	DOMAIN_UNK:ENST00000355957, 	DOMAIN_UNK:ENST00000355957, 	DOMAIN_UNK:ENST00000371242, 	DOMAIN_UNK:ENST00000371242, 
0.0022	4314	SRR064438	chimerascan	5	3	4	4	77507293	77507622	77631309	77704403	+	+	AK097800	SHROOM3,hShrmL	77507622	77631309	uc011cby.1|	uc011cbx.1|uc011cbz.1|	breast_cancer	SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000264907,	InFrame 	-1:UnSpec, 	-1:UnSpec, 	107:ENST00000264907, 	1995:ENST00000264907, 	DVCTDPGHADTGASNFVSPEHLTSGPQHRKAAWSGGVKLRLKHRRSEPAGRPHSWHTTKSGEKQPDASMMQISQGMIGPPWHQSYHSSSSTSDLSNYDHAYLRRSPDQCSSQGSMESLEPSGAYPPCHLSPAKSTGSIDQLSHFHNKRDSAYSSFSTSSSILEYPHPGISGRERSGSMDNTSARGGLLEGMRQADIRYVKTVYDTRRGVSAEYEVNSSALLLQGREARASANGQGYDKWSNIPRGKGVPPPSWSQQCPSSLETATDNLPPKVGAPLPPARSDSYAAFRHRERPSSWSSLDQKRLCRPQANSLGSLKSPFIEEQLHTVLEKSPENSPPVKPKHNYTQKAQPGQPLLPTSIYPVPSLEPHFAQVPQPSVSSNGMLYPALAKESGYIAPQGACNKMATIDENGNQNGSGRPGFAFCQPLEHDLLSPVEKKPEATAKYVPSKVHFCSVPENEEDASLKRHLTPPQGNSPHSNERKSTHSNKPSSHPHSLKCPQAQAWQAGEDKRSSRLSEPWEGDFQEDHNANLWRRLEREGLGQSLSGNFGKTKSAFSSLQNIPESLRRHSSLELGRGTQEGYPGGRPTCAVNTKAEDPGRKAAPDLGSHLDRQVSYPRPEGRTGASASFNSTDPSPEEPPAPSHPHTSSLGRRGPGPGSASALQGFQYGKPHCSVLEKVSKFEQREQGSQRPSVGGSGFGHNYRPHRTVSTSSTSGNDFEETKAHIRFSESAEPLGNGEQHFKNGELKLEEASRQPCGQQLSGGASDSGRGPQRPDARLLRSQSTFQLSSEPEREPEWRDRPGSPESPLLDAPFSRAYRNSIKDAQSRVLGATSFRRRDLELGAPVASRSWRPRPSSAHVGLRSPEASASASPHTPRERHSVTPAEGDLARPVPPAARRGARRRLTPEQKKRSYSEPEKMNEVGIVEEAEPAPLGPQRNGMRFPESSVADRRRLFERDGKACSTLSLSGPELKQFQQSALADYIQRKTGKRPTSAAGCSLQEPGPLRERAQSAYLQPGPAALEGSGLASASSLSSLREPSLQPRREATLLPATVAETQQAPRDRSSSFAGGRRLGERRRGDLLSGANGGTRGTQRGDETPREPSSWGARAGKSMSAEDLLERSDVLAGPVHVRSRSSPATADKRQDVLLGQDSGFGLVKDPCYLAGPGSRSLSCSERGQEEMLPLFHHLTPRWGGSGCKAIGDSSVPSECPGTLDHQRQASRTPCPRPPLAGTQGLVTDTRAAPLTPIGTPLPSAIPSGYCSQDGQTGRQPLPPYTPAMMHRSNGHTLTQPPGPRGCEGDGPEHGVEEGTRKRVSLPQWPPPSRAKWAHAAREDSLPEESSAPDFANLKHYQKQQSLPSLCSTSDPDTPLGAPSTPGRISLRISESVLRDSPPPHEDYEDEVFVRDPHPKATSSPTFEPLPPPPPPPPSQETPVYSMDDFPPPPPHTVCEAQLDSEDPEGPRPSFNKLSKVTIARERHMPGAAHVVGSQTLASRLQTSIKGSEAESTPPSFMSVHAQLAGSLGGQPAPIQTQSLSHDPVSGTQGLEKKVSPDPQKSSEDIRTEALAKEIVHQDKSLADILDPDSRLKTTMDLMEGLFPRDVNLLKENSVKRKAIQRTVSSSGCEGKRNEDKEAVSMLVNCPAYYSVSAPKAELLNKIKEMPAEVNEEEEQADVNEKKAELIGSLTHKLETLQEAKGSLLTDIKLNNALGEEVEALISELCKPNEFDKYRMFIGDLDKVVNLLLSLSGRLARVENVLSGLGEDASNEERSSLYEKRKILAGQHEDARELKENLDRRERVVLGILANYLSEEQLQDYQHFVKMKSTLLIEQRKLDDKIKLGQEQVKCLLESLPSDFIPKAGALALPPNLTSEPIPAGGCTFSGIFPTLTSPL:UnSpec-ENST00000264907, 	-1:UnSpec, 	3:ENST00000264907, 	Intergenic:UnSpec, 	CDS:ENST00000264907, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000264907, 	DOMAIN_UNK:ENST00000264907, 
0.0002	4315	SRR064438	chimerascan	5	0	M	M	14762	15888	1709	4262	+	+	cytochrome_b	TVAS5	15888	1709	uc004coy.2|	uc004cos.3|	breast_cancer	SRR064438,SRR064439,SRR064440,	breast_cancer,	NO_KINASE																
0.0002	4316	SRR064438	chimerascan	4	2	19	19	15443101	15443342	14072343	14104707	-	-	BRD4	RFX1	15443101	14104707	uc002nat.3|	uc002mxv.2|uc002mxv.2|uc010dzi.2|uc010dzi.2|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4317	SRR064438	chimerascan	4	2	4	4	76649460	76649795	76567955	76587233	-	-	AK311578	G3BP2	76649460	76587233	uc010iiy.2|	uc003hir.2|uc003his.2|uc003hit.2|	breast_cancer	SRR064287,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,	NO_KINASE																
0.1392	4318	SRR064438	chimerascan	4	1	20	20	61569148	61569274	36611425	36634799	-	-	DIDO1	KIAA0406	61569148	36634799	uc002ydu.1|uc002yds.1|uc002ydx.1|	uc002xhl.2|uc002xhm.2|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000266070,	ENST00000373447,	FrameShift 	-1:ENST00000266070, 	-1:ENST00000266070, 	-1:ENST00000373447, 	-1:ENST00000373447, 	MAAAEALERGNLEPGWRRLH*:ENST00000266070-ENST00000373447, 	1:ENST00000266070, 	Intron:ENST00000373447, 	5UTR:ENST00000266070, 	CDS:ENST00000373447, 	DOMAIN_UNK:ENST00000266070, 	DOMAIN_UNK:ENST00000266070, 	NO_DOMAIN:ENST00000373447, 	NO_DOMAIN:ENST00000373447, 
0.0003	4319	SRR064438	chimerascan	4	1	17	17	60129898	60142643	59469338	59470198	-	+	MED13	BCAS3	60129898	59469338	uc002izo.2|	uc002iyw.3|uc002iyw.3|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000262436,ENST00000397786,	ENST00000390652,ENST00000407086,ENST00000408905,	FrameShift 	1:ENST00000262436,ENST00000397786, 	154:ENST00000262436, 156:ENST00000397786, 	-1:ENST00000390652,ENST00000407086,ENST00000408905, 	-1:ENST00000390652,ENST00000407086,ENST00000408905, 	MSASFVPNGASLEDCHCNLFCLADLTGIKWKKYVWQGPTSAPILFPVTEEDPILSSFSRCLKADVLGVWRRDQRPGRRELWIFWWGEDPSFADLIHHDLSEEEDGVWENGLSYECRTLLFKAVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKNFSEREASRL*:ENST00000397786-ENST00000408905,ENST00000397786-ENST00000390652,ENST00000397786-ENST00000407086, MSASFVPNGASLEDCHCNLFCLADLTGIKWKKYVWQGPTSAPILFPVTEEDPILSSFSRCLKADVLGVWRRDQRPGRRELWIFWWGEDPLLTLFTMTYQKKKMECGRMDFPMNAVLCFSKVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKNFSEREASRL*:ENST00000262436-ENST00000408905,ENST00000262436-ENST00000390652,ENST00000262436-ENST00000407086, 	3:ENST00000397786, 5:ENST00000262436, 	24:ENST00000390652, 23:ENST00000408905, 26:ENST00000407086, 	CDS:ENST00000262436,ENST00000397786, 	CDS:ENST00000390652,ENST00000407086,ENST00000408905, 	NO_DOMAIN:ENST00000262436,ENST00000397786, 	NO_DOMAIN:ENST00000262436,ENST00000397786, 	NO_DOMAIN:ENST00000390652,ENST00000407086,ENST00000408905, 	Repeat=WD 1,Repeat=WD 2,Repeat=WD 3,Repeat=WD 4,Repeat=WD 5,Repeat=WD 6,Repeat=WD 7,:ENST00000390652,ENST00000407086,ENST00000408905, 
0.9894	4320	SRR064438	chimerascan	4	1	17	17	57232492	57232800	34851600	34863351	-	-	SKA2,FAM33A	MYO19	57232492	34863351	uc002ixd.2|uc002ixe.2|	uc010wcy.1|uc010cuu.2|uc010wcz.1|uc010cuu.2|uc010wcz.1|uc010wcy.1|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000330137,	ENST00000431794,ENST00000378326,	InFrame 	1:ENST00000330137, 	10:ENST00000330137, 	451:ENST00000431794,ENST00000378326, 	970:ENST00000431794, 636:ENST00000378326, 	MEAEVDKLELMEEYAVEGLEWSFINYQDNQPCLDLIEGSPISICSLINEECRLNRPSSAAQLQTRIETALAGSPCLGHNKLSREPSFIVVHYAGPVRYHTAGLVEKNKDPIPPELTRLLQQSQDPLLMGLFPTNPKEKTQEEPPGQSRAPVLTVVSKFKASLEQLLQVLHSTTPHYIRCIKPNSQGQAQTFLQEEVLSQLEACGLVETIHISAAGFPIRVSHRNFVERYKLLRRLHPCTSSGPDSPYPAKGLPEWCPHSEEATLEPLIQDILHTLPVLTQAAAITGDSAEAMPAPMHCGRTKVFMTDSMLELLECGRARVLEQCARCIQGGWRRHRHREQERQWRAVMLIQAAIRSWLTRKHIQRLHAAATVIKRAWQKWRIRMACLAAKELDGVEEKHFSQAPCSLSTSPLQTRLLEAIIRLWPLGLVLANTAMGVGSFQRKLVVWACLQLPRGSPSSYTVQTAQDQAGVTSIRALPQGSIKFHCRKSPLRYADICPEPSPYSITGFNQILLERHRLIHVTSSAFTGLG:ENST00000330137-ENST00000431794, MEAEVDKLELMEEYAVEGLEWSFINYQDNQPCLDLIEGSPISICSLINEECRLNRPSSAAQLQTRIETALAGSPCLGHNKLSREPSFIVVHYAGPVRYHTAGLVEKNKDPIPPELTRLLQQSQDPLLMGLFPTNPKEKTQEEPPGQSRAPVLTVVSKFKASLEQLLQVLHSTTPHYIRCIKPNSQGQAQTFLQEEA:ENST00000330137-ENST00000378326, 	1:ENST00000330137, 	Intron:ENST00000431794,ENST00000378326, 	CDS:ENST00000330137, 	CDS:ENST00000431794,ENST00000378326, 	NO_DOMAIN:ENST00000330137, 	NO_DOMAIN:ENST00000330137, 	NO_DOMAIN:ENST00000431794,ENST00000378326, 	NO_DOMAIN:ENST00000431794,ENST00000378326, 
0.0002	4321	SRR064438	chimerascan	3	2	2	2	96676299	96676480	96071025	96078878	+	+	LOC729234	FAHD2A	96676480	96071025	uc010fht.2|	uc002sus.2|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0002	4322	SRR064438	chimerascan	3	2	2	2	97760438	97760582	96071025	96078878	-	+	FAHD2B	FAHD2A	97760438	96071025	uc002sxm.2|	uc002sus.2|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0003	4323	SRR064438	chimerascan	3	2	2	2	10262735	10269281	10281981	10351856	+	+	RRM2	C2orf48	10269281	10281981	uc002rah.2|	uc002rai.1|	breast_cancer	SRR064438,SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000304567,	ENST00000381786,	FrameShift 	1:ENST00000304567, 	339:ENST00000304567, 	-1:ENST00000381786, 	-1:ENST00000381786, 	MLSLRVPLAPITDPQQLQLSPLKGLSLVDKENTPPALSGTRVLASKTARRIFQEPTEPKTKAAAPGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVLGDREVQSRWSPGPRGDSTPVREMETNHPPSVRG*:ENST00000304567-ENST00000381786, 	Intron:ENST00000304567, 	-1:ENST00000381786, 	CDS:ENST00000304567, 	5UTR:ENST00000381786, 	DOMAIN_UNK:ENST00000304567, 	DOMAIN_UNK:ENST00000304567, 	DOMAIN_UNK:ENST00000381786, 	DOMAIN_UNK:ENST00000381786, 
0.9957	4324	SRR064438	chimerascan	3	1	17	20	37793412	37793484	53259997	53267709	+	+	STARD3	DOK5	37793484	53259997	uc010weg.1|uc002hse.2|uc010wei.1|uc010weh.1|uc002hsd.2|	uc002xwy.2|uc002xwz.2|uc010gin.2|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	3p_KINASE	ENST00000336308,	ENST00000262593,	InFrame 	-1:ENST00000336308, 	-1:ENST00000336308, 	242:ENST00000262593, 	306:ENST00000262593, 	MEQVQMKMSERAASLSTMVPLPRSAYWQHITRQHSTGQLYRLQDVSSPLKLHRTETFPAYRSEH:ENST00000336308-ENST00000262593, 	Intron:ENST00000336308, 	7:ENST00000262593, 	5UTR:ENST00000336308, 	CDS:ENST00000262593, 	DOMAIN_UNK:ENST00000336308, 	DOMAIN_UNK:ENST00000336308, 	NO_DOMAIN:ENST00000262593, 	Domain=PH,Domain=IRS-type PTB;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00389,:ENST00000262593, 
0.0189	4325	SRR064438	chimerascan	3	1	10	10	71906289	71906432	71872030	71883853	-	-	TYSND1	AIFM2	71906289	71883853	uc001jqq.2|	uc001jqp.1|uc010qjg.1|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000287078,	ENST00000307864,	FrameShift 	1:ENST00000287078, 	17:ENST00000287078, 	-1:ENST00000307864, 	-1:ENST00000307864, 	MRRQWGSAMRAAEQAGCMCLI*:ENST00000287078-ENST00000307864, 	1:ENST00000287078, 	-1:ENST00000307864, 	CDS:ENST00000287078, 	5UTR:ENST00000307864, 	DOMAIN_UNK:ENST00000287078, 	DOMAIN_UNK:ENST00000287078, 	DOMAIN_UNK:ENST00000307864, 	DOMAIN_UNK:ENST00000307864, 
0.0004	4326	SRR064438	chimerascan	3	1	3	3	33055548	33138314	32483332	32496333	-	+	GLB1	CMTM7	33055548	32483332	uc003cfh.1|uc003cfi.1|uc011axk.1|uc003cfj.1|	uc003cez.1|uc003cey.1|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000307363,	ENST00000454304,ENST00000349718,ENST00000334983,	FrameShift 	1:ENST00000307363, 	577:ENST00000307363, 	-1:ENST00000454304,ENST00000349718,ENST00000334983, 	-1:ENST00000454304,ENST00000349718,ENST00000334983, 	MPGFLVRILPLLLVLLLLGPTRGLRNATQRMFEIDYSRDSFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEYFLRLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKESILLRSSDPDYLAAVDKWLGVLLPKMKPLLYQNGGPVITVQVENEYGSYFACDFDYLRFLQKRFRHHLGDDVVLFTTDGAHKTFLKCGALQGLYTTVDFGTGSNITDAFLSQRKCEPKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASVNLYMFIGGTNFAYWNGANSPYAAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKFEKVPEGPIPPSTPKFAYGKVTLEKLKTVGAALDILCPSGPIKSLYPLTFIQVKQHYGFVLYRTTLPQDCSNPAPLSSPLNGVHDRAYVAVDGIPQGVLERNNVITLNITGKAGATLDLLVENMGRVNYGAYINDFKGLVSNLTLSSNILTDWTIFPLDTEDAVCSHLGGWGHRDSGHHDEAWAHNSSNYTLPAFYMGNFSIPSGIPDLPQDTFIQFPGWTNHPADCLHLCAELPVDQLQRLQLL*:ENST00000307363-ENST00000454304,ENST00000307363-ENST00000349718,ENST00000307363-ENST00000334983, 	15:ENST00000307363, 	2:ENST00000454304,ENST00000349718,ENST00000334983, 	CDS:ENST00000307363, 	CDS:ENST00000454304,ENST00000349718,ENST00000334983, 	NO_DOMAIN:ENST00000307363, 	NO_DOMAIN:ENST00000307363, 	NO_DOMAIN:ENST00000454304,ENST00000349718,ENST00000334983, 	Domain=MARVEL;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00581,:ENST00000349718,ENST00000334983, Domain=MARVEL;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS51225,:ENST00000454304, 
0.0002	4327	SRR064438	chimerascan	3	0	19	18	17326155	17326879	47014859	47017308	+	-	USE1	RPL17	17326879	47017308	uc010eal.1|uc002nfn.2|uc002nfo.2|	uc002ldn.2|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000263897,	UnSpec,	UnSpec 	1:ENST00000263897, 	77:ENST00000263897, 	-1:UnSpec, 	-1:UnSpec, 	MAASRLELNLVRLLSRCEAMAAEKRDPDEWRLEKYVGALEDMLQALKVHASKPASEVINEYSWKVDFLKGMLQAEKL:ENST00000263897-UnSpec, 	Intron:ENST00000263897, 	-1:UnSpec, 	CDS:ENST00000263897, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000263897, 	DOMAIN_UNK:ENST00000263897, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0001	4328	SRR064438	chimerascan	3	0	1	15	155278539	155278756	43432319	43433465	+	-	FDPS	CR599671	155278756	43433465	uc001fkc.2|uc001fkd.2|	uc001zqs.1|	breast_cancer	SRR064286,SRR064438,	breast_cancer,	NO_KINASE	ENST00000356657,	UnSpec,	UnSpec 	0:ENST00000356657, 	0:ENST00000356657, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000356657-UnSpec, 	Intron:ENST00000356657, 	Intron:UnSpec, 	5UTR:ENST00000356657, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000356657, 	DOMAIN_UNK:ENST00000356657, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4329	SRR064438	chimerascan	3	0	M	M	7587	8295	1709	4262	+	+	X64709	TVAS5	8295	1709	uc004cou.3|	uc004cos.3|	breast_cancer	SRR064438,SRR064439,SRR064440,	breast_cancer,	NO_KINASE																
0.0004	4330	SRR064438	chimerascan	3	0	13	13	113556509	113556685	113678958	113752863	+	+	BC035340	MCF2L	113556685	113678958	uc001vso.2|	uc001vsq.2|uc001vss.3|uc010tjr.1|uc010tjs.1|uc001vsr.2|uc001vsu.2|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000375597,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000375597, 	-1:ENST00000375597, 	WAGAGRKPGYHLP*:UnSpec-ENST00000375597, 	-1:UnSpec, 	3:ENST00000375597, 	Intergenic:UnSpec, 	CDS:ENST00000375597, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000375597, 	DOMAIN_UNK:ENST00000375597, 
0.0002	4331	SRR064438	chimerascan	3	0	M	M	7587	8295	237	368	+	-	X64709	DQ582201	8295	368	uc004cou.3|	uc004coq.3|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4332	SRR064438	chimerascan	3	0	8	8	71315935	71316020	81550769	81733850	-	-	NCOA2	ZNF704	71315935	81733850	uc003xyn.1|	uc003yby.1|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0022	4333	SRR064438	chimerascan	3	0	17	17	36932850	36943173	56809845	56811690	-	+	PIP4K2B	RAD51C	36932850	56809845	uc010wdu.1|	uc002iwu.2|uc002iww.2|uc010ddc.2|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000337432,	InFrame 	-1:UnSpec, 	-1:UnSpec, 	322:ENST00000337432, 	376:ENST00000337432, 	LATLYKSPSQKECTVLFQIKPQGFRDTVVTSACSLQTEGSLSTRKRSRDPEEEL:UnSpec-ENST00000337432, 	-1:UnSpec, 	8:ENST00000337432, 	Intergenic:UnSpec, 	CDS:ENST00000337432, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000337432, 	DOMAIN_UNK:ENST00000337432, 
0.0002	4334	SRR064438	chimerascan	9	9	17	11	37006352	37010053	65265233	65273937	-	+	LOC222901	AlphaTFEB	37006352	65265233	uc002hqy.1|	uc010roh.1|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0002	4335	SRR064438	chimerascan	2	2	10	10	49207727	49207825	75404645	75414038	-	-	FAM25B	SYNPO2L	49207727	75414038	uc010qgj.1|	uc001jut.3|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000372872,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000372872, 	-1:ENST00000372872, 	DSKTEPGWQSRTPREGPALGNQWGLLHQPLPCQCHEPHRCLRKSACPHCAAVSRRGSCAISISP*:UnSpec-ENST00000372872, 	-1:UnSpec, 	Intron:ENST00000372872, 	Intergenic:UnSpec, 	CDS:ENST00000372872, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000372872, 	DOMAIN_UNK:ENST00000372872, 
0.0002	4336	SRR064438	chimerascan	2	2	10	10	48247662	48247760	75404645	75414038	+	-	FAM25B	SYNPO2L	48247760	75414038	uc010qge.1|	uc001jut.3|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000372872,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000372872, 	-1:ENST00000372872, 	DSKTEPGWQSRTPREGPALGNQWGLLHQPLPCQCHEPHRCLRKSACPHCAAVSRRGSCAISISP*:UnSpec-ENST00000372872, 	-1:UnSpec, 	Intron:ENST00000372872, 	Intergenic:UnSpec, 	CDS:ENST00000372872, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000372872, 	DOMAIN_UNK:ENST00000372872, 
0.0002	4337	SRR064438	chimerascan	2	2	10	10	47181590	47181688	75404645	75414038	-	-	FAM25B	SYNPO2L	47181590	75414038	uc010qfw.1|	uc001jut.3|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000340853,	ENST00000394810,ENST00000372872,	FrameShift 	1:ENST00000340853, 	24:ENST00000340853, 	-1:ENST00000394810,ENST00000372872, 	-1:ENST00000394810,ENST00000372872, 	MLGGLGKLAAEGLAHRTEKATEGADSKTEPGWQSRTPREGPALGNQWGLLHQPLPCQCHEPHRCLRKSACPHCAAVSRRGSCAISISP*:ENST00000340853-ENST00000394810,ENST00000340853-ENST00000372872, 	1:ENST00000340853, 	Intron:ENST00000394810,ENST00000372872, 	CDS:ENST00000340853, 	CDS:ENST00000394810,ENST00000372872, 	NO_DOMAIN:ENST00000340853, 	NO_DOMAIN:ENST00000340853, 	NO_DOMAIN:ENST00000394810,ENST00000372872, 	Domain=PDZ;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,:ENST00000394810, NO_DOMAIN:ENST00000372872, 
0.0002	4338	SRR064438	chimerascan	2	2	10	4	38679769	38691780	120414488	120473178	-	+	CDC10L	CR610292	38679769	120414488	uc009xmd.1|	uc003ide.3|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0005	4339	SRR064438	chimerascan	2	2	13	13	113951469	113951810	113718618	113752863	+	+	LAMP1	MCF2L	113951810	113718618	uc010tka.1|uc001vtm.1|	uc001vsr.2|uc001vss.3|uc010tjs.1|uc001vsq.2|uc001vst.1|uc001vsu.2|uc010tjr.1|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000332556,ENST00000397181,	ENST00000434480,ENST00000442652,ENST00000397030,ENST00000375597,ENST00000375591,ENST00000375601,ENST00000375608,ENST00000421756,ENST00000375604,	FrameShift 	1:ENST00000332556,ENST00000397181, 	20:ENST00000332556,ENST00000397181, 	-1:ENST00000434480,ENST00000442652,ENST00000397030,ENST00000375597,ENST00000375591,ENST00000375601,ENST00000375608,ENST00000421756,ENST00000375604, 	-1:ENST00000434480,ENST00000442652,ENST00000397030,ENST00000375597,ENST00000375591,ENST00000375601,ENST00000375608,ENST00000421756,ENST00000375604, 	MAAPGSARRPLLLLLLLLLLGHNAELRTRLTRLHR*:ENST00000397181-ENST00000434480,ENST00000397181-ENST00000375601,ENST00000397181-ENST00000375604,ENST00000332556-ENST00000434480,ENST00000397181-ENST00000375591,ENST00000332556-ENST00000375604,ENST00000332556-ENST00000375597,ENST00000332556-ENST00000375591,ENST00000332556-ENST00000442652,ENST00000397181-ENST00000421756,ENST00000332556-ENST00000421756,ENST00000332556-ENST00000375608,ENST00000397181-ENST00000375597,ENST00000397181-ENST00000442652,ENST00000332556-ENST00000397030,ENST00000397181-ENST00000375608,ENST00000397181-ENST00000397030,ENST00000332556-ENST00000375601, 	Intron:ENST00000332556,ENST00000397181, 	6:ENST00000434480,ENST00000442652,ENST00000375601,ENST00000421756,ENST00000397030,ENST00000375604,ENST00000375597, 4:ENST00000375591, 7:ENST00000375608, 	CDS:ENST00000332556,ENST00000397181, 	CDS:ENST00000434480,ENST00000442652,ENST00000397030,ENST00000375597,ENST00000375591,ENST00000375601,ENST00000375608,ENST00000421756,ENST00000375604, 	NO_DOMAIN:ENST00000332556,ENST00000397181, 	NO_DOMAIN:ENST00000397181, Topological domain=Lumenal;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00740,Region=First lumenal domain,Region=Hinge,Region=Second lumenal domain,:ENST00000332556, 	NO_DOMAIN:ENST00000434480,ENST00000442652,ENST00000397030,ENST00000375597,ENST00000375591,ENST00000375601,ENST00000375608,ENST00000421756,ENST00000375604, 	Domain=CRAL-TRIO;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00056,Repeat=Spectrin,Domain=DH;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00062,Domain=PH;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00145,Domain=SH3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00192,:ENST00000375608,ENST00000421756,ENST00000397030,ENST00000375604,ENST00000375597, NO_DOMAIN:ENST00000434480,ENST00000375591,ENST00000442652,ENST00000375601, 
0.9894	4340	SRR064438	chimerascan	2	2	10	10	88780056	88780154	75404645	75414038	+	-	FAM25A	SYNPO2L	88780154	75414038	uc010qmo.1|	uc001jut.3|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000444180,	ENST00000394810,ENST00000372872,	InFrame 	1:ENST00000444180, 	24:ENST00000444180, 	35:ENST00000394810,ENST00000372872, 	602:ENST00000372872, 977:ENST00000394810, 	MLGGLGKLAAEGLAHRTEKATEGARIRRRSQAGRAGLRERDQLLAINGVSCTNLSHASAMSLIDASGNQLVLTVQRLADEGPVQSPSPHELQVLSPLSPLSPEPPGAPVPQPLQPGSLRSPPDSEAYYGETDSDADGPATQEKPRRPRRRGPTRPTPPGAPPDEVYLSDSPAEPAPTIPGPPSQGDSRVSSPSWEDGAALQPPPAEALLLPHGPLRPGPHLIPMVGPVPHPVAEDLTTTYTQKAKQAKLQRAESLQEKSIKEAKTKCRTIASLLTAAPNPHSKGVLMFKKRRQRAKKYTLVSFGAAAGTGAEEEDGVPPTSESELDEEAFSDARSLTNQSDWDSPYLDMELARAGSRASEGQGSGLGGQLSEVSGRGVQLFEQQRQRADSSTQELARVEPAAMLNGEGLQSPPRAQSAPPEAAVLPPSPLPAPVASPRPFQPGGGAPTPAPSIFNRSARPFTPGLQGQRPTTTSVIFRPLAPKRANDSLGGLSPAPPPFLSSQGPTPLPSFTSGVPSHAPVSGSPSTPRSSGPVTATSSLYIPAPSRPVTPGGAPEPPAPPSAAAMTSTASIFLSAPLRPSARPEAPAPGPGAPEPPSAREQRISVPAARTGILQEARRRGTRKQMFRPGKEETKNSPNPELLSLVQNLDEKPRAGGAESGPEEDALSLGAEACNFMQPVGARSYKTLPHVTPKTPPPMAPKTPPPMTPKTPPPVAPKPPSRGLLDGLVNGAASSAGIPEPPRLQGRGGELFAKRQSRADRYVVEGTPGPGLGPRPRSPSPTPSLPPSWKYSPNIRAPPPIAYNPLLSPFFPQAARTLPKAQSQGPRATPKQGIKALDFMRHQPYQLKTAMFCFDEVPPTPGPIASGSPKTARVQEIRRFSTPAPQPTAEPLAPTVLAPRAATTLDEPIWRTELASAPVPSPAPPPEAPRGLGASPSSCGFQVARPRFSATRTGLQAHVWRPGAGHQ:ENST00000444180-ENST00000394810, MLGGLGKLAAEGLAHRTEKATEGARIRRRSQAGRAGLRERDQLLAINGVSCTNLSHASAMSLIDASGNQLVLTVQRLADEGPVQSPSPHELQVLSPLSPLSPEPPGAPVPQPLQPGSLRSPPDSEAYYGETDSDADGPATQEKPRRPRRRGPTRPTPPGAPPDEVYLSDSPAEPAPTIPGPPSQGDSRVSSPSWEDGAALQPPPAEALLLPHGPLRPGPHLIPMVGPVPHPVAEDLTTTYTQKAKQAKLQRAESLQEKSIKEAKTKCRTIASLLTAAPNPHSKGVLMFKKRRQRAKKYTLVSFGAAAGTGAEEEDGVPPTSESELDEEAFSDARSLTNQSDWDSPYLDMELARAGSRASEGQGSGLGGQLSEVSGRGVQLFEQQRQRADSSTQELARVEPAAMLNGEGLQSPPRAQSAPPEAAVLPPSPLPAPVASPRPFQPGGGAPTPAPSIFNRSARPFTPGLQGQRPTTTSVIFRPLAPKRANDSLGGLSPAPPPFLSSQGPTPLPSFTSGVPSHAPVSGSPSTPRSSGPVTATSSLYIPAPSRPVTPGGAPEPPAPPSAAAMTSFQSHPIPQNPSYCFFSASGPDLQS:ENST00000444180-ENST00000372872, 	Intron:ENST00000444180, 	Intron:ENST00000394810,ENST00000372872, 	CDS:ENST00000444180, 	CDS:ENST00000394810,ENST00000372872, 	NO_DOMAIN:ENST00000444180, 	NO_DOMAIN:ENST00000444180, 	Domain=PDZ;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,:ENST00000394810, NO_DOMAIN:ENST00000372872, 	NO_DOMAIN:ENST00000394810,ENST00000372872, 
0.0002	4341	SRR064438	chimerascan	2	1	X	X	3778831	3781615	3735571	3736541	-	-	AK000470	LOC389906	3778831	3736541	uc004crl.2|	uc011mhk.1|uc004crj.2|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0189	4342	SRR064438	chimerascan	2	1	22	22	37581258	37581994	37521880	37540245	-	-	C1QTNF6	IL2RB	37581258	37540245	uc003aqw.1|uc003aqz.1|uc003aqx.1|uc003aqy.1|	uc003aqv.1|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000337843,	ENST00000216223,	FrameShift 	1:ENST00000337843, 	96:ENST00000337843, 	-1:ENST00000216223, 	-1:ENST00000216223, 	MQWLRVRESPGEATGHRVTMGTAALGPVWAALLLFLLMCEIPMVELTFDRAVASGCQRCCDSEDPLDPAHVSSASSSGRPHALPEIRPYINITILKGLPSSAPPCGCNGGPCSVLASAPPHPPPAPGYLLGICSGEWHFPVHMLLQLESQHLLCLEPRWGSAGHFLPSPCLAGQTAVEPNL*:ENST00000337843-ENST00000216223, 	2:ENST00000337843, 	-1:ENST00000216223, 	CDS:ENST00000337843, 	5UTR:ENST00000216223, 	DOMAIN_UNK:ENST00000337843, 	DOMAIN_UNK:ENST00000337843, 	DOMAIN_UNK:ENST00000216223, 	DOMAIN_UNK:ENST00000216223, 
0.0002	4343	SRR064438	chimerascan	2	1	17	17	58422842	58469586	37560543	37604157	-	-	USP32	MED1	58422842	37604157	uc002iyo.1|uc010wov.1|	uc002hru.2|uc010wee.1|uc002hrv.3|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000300896,ENST00000393003,	ENST00000300651,ENST00000394287,	FrameShift 	1:ENST00000300896,ENST00000393003, 	61:ENST00000300896,ENST00000393003, 	-1:ENST00000300651,ENST00000394287, 	-1:ENST00000300651,ENST00000394287, 	MGAKESRIGFLSYEEALRRVTDVELKRLKDAFKRTCGLSYYMGQHCFIREVLGDGVPPKVAESQKS*:ENST00000393003-ENST00000394287,ENST00000300896-ENST00000394287,ENST00000393003-ENST00000300651,ENST00000300896-ENST00000300651, 	2:ENST00000300896,ENST00000393003, 	Intron:ENST00000300651,ENST00000394287, 	CDS:ENST00000300896,ENST00000393003, 	CDS:ENST00000300651,ENST00000394287, 	NO_DOMAIN:ENST00000300896,ENST00000393003, 	Domain=EF-hand 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00448,Domain=EF-hand 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00448,Domain=EF-hand 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00448,Domain=DUSP;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00613,Domain=USP,:ENST00000300896,ENST00000393003, 	NO_DOMAIN:ENST00000300651,ENST00000394287, 	Region=Interaction with the Mediator complex and THRA,Region=Interaction with ESR1,Region=Interaction with the Mediator complex,Region=Interaction with the Mediator complex,Region=Interaction with THRA,Region=Interaction with VDR,Region=Interaction with PPARGC1A and THRA,Region=Interaction with ESR1,Region=Interaction with GATA1;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24245781;Dbxref=PMID:24245781,Region=Interaction with TP53,:ENST00000300651,ENST00000394287, 
0.0001	4344	SRR064438	chimerascan	2	1	7	7	64126511	64139714	64144465	64147263	+	+	ZNF107	BC053669	64139714	64144465	uc003tte.2|uc003ttd.2|	uc003ttf.2|	breast_cancer	SRR064286,SRR064438,	breast_cancer,	NO_KINASE	ENST00000344930,	UnSpec,	UnSpec 	0:ENST00000344930, 	0:ENST00000344930, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000344930-UnSpec, 	Intron:ENST00000344930, 	Intron:UnSpec, 	5UTR:ENST00000344930, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000344930, 	DOMAIN_UNK:ENST00000344930, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4345	SRR064438	chimerascan	2	1	X	X	3817257	3820041	3735571	3736541	-	-	AK000470	LOC389906	3817257	3736541	uc004crn.2|	uc011mhk.1|uc004crj.2|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0002	4346	SRR064438	chimerascan	2	1	17	17	41277600	41277787	41327808	41363706	+	+	NBR2	NBR1	41277787	41327808	uc010czb.1|uc002idg.2|uc002idh.2|uc002idf.2|	uc010whw.1|uc010whv.1|uc010whu.1|uc010diz.2|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0002	4347	SRR064438	chimerascan	2	0	1	1	147931724	147931980	145004781	145005286	-	+	FLJ39739,BC110832	BC065231	147931724	145004781	uc009wjz.1|uc009wjy.1|uc001eqn.2|uc001eqo.1|uc001eql.2|uc009wjx.1|	uc001emi.3|	breast_cancer	SRR064286,SRR064437,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	4348	SRR064438	chimerascan	2	0	20	19	52675186	52687304	12335503	12336094	-	-	BCAS1	GIOT-2	52675186	12336094	uc002xws.2|uc010gil.1|uc002xwt.2|	uc002mtl.2|uc010dyr.1|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000371435,	UnSpec,	UnSpec 	1:ENST00000371435, 	23:ENST00000371435, 	-1:UnSpec, 	-1:UnSpec, 	MGNQMSVPQRVEDQENEPEAETY:ENST00000371435-UnSpec, 	2:ENST00000371435, 	-1:UnSpec, 	CDS:ENST00000371435, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000371435, 	DOMAIN_UNK:ENST00000371435, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.7402	4349	SRR064438	chimerascan	2	0	16	8	21964609	21964777	42911442	42940923	+	+	UQCRC2	FNTA	21964777	42911442	uc010bxa.2|uc002djx.2|uc002djy.2|	uc003xps.2|uc003xpt.2|uc003xpv.2|uc003xpu.2|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000268379,	ENST00000302279,	InFrame 	1:ENST00000268379, 	11:ENST00000268379, 	1:ENST00000302279, 	379:ENST00000302279, 	MKLLTRAGSFSGRGGASATTSAADRGEMAATEGVGEAAQGGEPGQPAQPPPQPHPPPPQQQHKEEMAAEAGEAVASPMDDGFVSLDSPSYVLYRDRAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIGRSLQSKHSTENDSPTNVQQ:ENST00000268379-ENST00000302279, 	Intron:ENST00000268379, 	-1:ENST00000302279, 	CDS:ENST00000268379, 	5UTR:ENST00000302279, 	DOMAIN_UNK:ENST00000268379, 	DOMAIN_UNK:ENST00000268379, 	DOMAIN_UNK:ENST00000302279, 	DOMAIN_UNK:ENST00000302279, 
0.0002	4350	SRR064438	chimerascan	2	0	5	19	139781429	139903825	14031370	14041693	+	+	FLJ00246,ANKHD1-EIF4EBP3,ANKHD1	CC2D1A	139903825	14031370	uc003lft.1|uc003lfq.1|uc003lfv.1|uc003lfs.1|uc011czh.1|uc003lfw.2|uc003lfu.1|uc003lfr.2|	uc002mxo.2|uc002mxq.1|uc002mxp.2|uc010dzh.2|	breast_cancer	SRR064438,	breast_cancer,	3p_KINASE	ENST00000297183,ENST00000360839,ENST00000253810,	ENST00000318003,ENST00000397486,ENST00000412841,	FrameShift 	1:ENST00000297183,ENST00000360839,ENST00000253810, 	1497:ENST00000297183,ENST00000360839,ENST00000253810, 	-1:ENST00000318003,ENST00000397486,ENST00000412841, 	-1:ENST00000318003,ENST00000397486,ENST00000412841, 	MLTDSGGGGTSFEEDLDSVAPRSAPAGASEPPPPGGVGLGIRTVRLFGEAGPASGVGSSGGGGSGSGTGGGDAALDFKLAAAVLRTGGGGGASGSDEDEVSEVESFILDQEDLDNPVLKTTSEIFLSSTAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMKAENSHNAGQVDTRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAASSGGYLDIVKLLLLHDADVNSQSATGNTALTYACAGGFVDIVKVLLNEGANIEDHNENGHTPLMEAASAGHVEVARVLLDHGAGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIELGCSTPLMEASQEGHLELVKYLLASGANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLSVPTTDVSQLPPPSQDQSQVPRVPTHTLAMVVPPQEPDRTSQENSPALLGVQKGTSKQKSSSLQVADQDLLPSFHPYQPLECIVEETEGKLNELGQRISAIEKAQLKSLELIQGEPLNKDKIEELKKNREEQVQKKKKILKELQKVERQLQMKTQQQFTKEYLETKGQKDTVSLHQQCSHRGVFPEGEGDGSLPEDHFSELPQVDTILFKDNDVDDEQQSPPSAEQIDFVPVQPLSSPQCNFSSDLGSNGTNSLELQKVSGNQQIVGQPQIAITGHDQGLLVQEPDGLMVATPAQTLTDTLDDLIAAVSTRVPTGSNSSSQTTECLTPESCSQTTSNVASQSMPPVYPSVDIDAHTESNHDTALTLACAGGHEELVSVLIARDAKIEHRDKKGFTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEHRNVSDYTPLSLAASGGYVNIIKILLNAGAEINSRTGSKLGISPLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLIHRGAHIDVRNKKGNTPLWLASNGGHFDVVQLLVQAGADVDAADNRKITPLMSAFRKGHVKVVQYLVKEVNQFPSDIECMRYIATITDKELLKKCHQCVETIVKAKDQQAAEANKNASILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKENSELPEDEDEEENDEDGEQPCGPHSPAQSPTLKNSPVGISPNSQSAPQSHIHQSPAAAGLPRGPQEAAPAGRTASQAEKRRGGCQDAPAPSQGTGAYAGGLAQWAACGHHQGAACPCQQGRLCPGPAAWPGSVSGGRPALW*:ENST00000360839-ENST00000318003,ENST00000297183-ENST00000318003,ENST00000360839-ENST00000412841,ENST00000253810-ENST00000318003,ENST00000253810-ENST00000397486,ENST00000253810-ENST00000412841,ENST00000297183-ENST00000412841,ENST00000297183-ENST00000397486,ENST00000360839-ENST00000397486, 	Intron:ENST00000297183,ENST00000360839,ENST00000253810, 	13:ENST00000318003,ENST00000397486,ENST00000412841, 	CDS:ENST00000297183,ENST00000360839,ENST00000253810, 	CDS:ENST00000318003,ENST00000397486,ENST00000412841, 	Domain=KH;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50084,:ENST00000297183, NO_DOMAIN:ENST00000360839,ENST00000253810, Repeat=ANK 1,Repeat=ANK 2,Repeat=ANK 3,Repeat=ANK 4,Repeat=ANK 5,Repeat=ANK 6,Repeat=ANK 7,Repeat=ANK 8,Repeat=ANK 9,Repeat=ANK 10,Repeat=ANK 11,Repeat=ANK 12,Repeat=ANK 13,Repeat=ANK 14,Repeat=ANK 15,Repeat=ANK 16,Repeat=ANK 17,Repeat=ANK 18,Repeat=ANK 19,Repeat=ANK 20,Repeat=ANK 21,Repeat=ANK 22,Repeat=ANK 23,Repeat=ANK 24,Repeat=ANK 25,:ENST00000360839, 	Domain=KH;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00117,:ENST00000360839, NO_DOMAIN:ENST00000297183,ENST00000253810, Repeat=ANK 1,Repeat=ANK 2,Repeat=ANK 3,Repeat=ANK 4,Repeat=ANK 5,Repeat=ANK 6,Repeat=ANK 7,Repeat=ANK 8,Repeat=ANK 9,Repeat=ANK 10,Repeat=ANK 11,Repeat=ANK 12,Repeat=ANK 13,Repeat=ANK 14,Repeat=ANK 15,Repeat=ANK 16,Repeat=ANK 17,Repeat=ANK 18,Repeat=ANK 19,Repeat=ANK 20,Repeat=ANK 21,Repeat=ANK 22,Repeat=ANK 23,Repeat=ANK 24,Repeat=ANK 25,Domain=KH;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00117,:ENST00000360839, 	NO_DOMAIN:ENST00000318003,ENST00000397486,ENST00000412841, 	Domain=C2,:ENST00000318003, NO_DOMAIN:ENST00000397486,ENST00000412841, 
0.0003	4351	SRR064438	chimerascan	2	0	1	1	156449378	156460391	159409549	159410510	-	+	MEF2D	OR10J1	156449378	159409549	uc001fpb.2|uc001fpe.1|uc001fpc.2|uc001fpd.2|	uc010piv.1|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000340875,ENST00000348159,ENST00000368240,ENST00000360595,	ENST00000423932,	FrameShift 	1:ENST00000340875,ENST00000348159,ENST00000368240,ENST00000360595, 	201:ENST00000340875, 202:ENST00000348159,ENST00000368240,ENST00000360595, 	-1:ENST00000423932, 	-1:ENST00000423932, 	MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIEALHKKHRECESPEVDEVFALTPQTEEKYKKIDEEFDKMMQSYRLASTVPAPNFAMPVTVPVSNQSSLQFSNPSGSLVTPSLVTSSLTDPRLLSPQQPALQRNSVSPGLPQRPASACFYVSDLGTNP*:ENST00000340875-ENST00000423932, MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGEDSLEQSPLLEDKYRRASEELDGLFRRYGSTVPAPNFAMPVTVPVSNQSSLQFSNPSGSLVTPSLVTSSLTDPRLLSPQQPALQRNSVSPGLPQRPASACFYVSDLGTNP*:ENST00000368240-ENST00000423932,ENST00000348159-ENST00000423932,ENST00000360595-ENST00000423932, 	5:ENST00000340875,ENST00000348159,ENST00000368240,ENST00000360595, 	1:ENST00000423932, 	CDS:ENST00000340875,ENST00000348159,ENST00000368240,ENST00000360595, 	CDS:ENST00000423932, 	Domain=MADS-box;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00251,:ENST00000348159,ENST00000360595, Domain=MADS-box;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50066,:ENST00000368240, NO_DOMAIN:ENST00000340875, 	NO_DOMAIN:ENST00000340875,ENST00000368240, Region=Beta domain,:ENST00000348159,ENST00000360595, 	NO_DOMAIN:ENST00000423932, 	Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,:ENST00000423932, 
0.0003	4352	SRR064438	chimerascan	2	0	17	15	37856254	37856564	57210833	57580712	+	+	ERBB2	TCF12	37856564	57210833	uc010wek.1|	uc010bfs.2|uc010ugn.1|uc002aed.2|uc002aea.2|uc002aeb.2|uc002aec.2|	breast_cancer	SRR064438,SRR064441,	breast_cancer,	5p_KINASE	ENST00000269571,	ENST00000267811,	FrameShift 	1:ENST00000269571, 	24:ENST00000269571, 	-1:ENST00000267811, 	-1:ENST00000267811, 	MELAALCRWGLLLALLPPGAASTQGRRRAERGGEAASAKKMSA*:ENST00000269571-ENST00000267811, 	Intron:ENST00000269571, 	-1:ENST00000267811, 	CDS:ENST00000269571, 	5UTR:ENST00000267811, 	DOMAIN_UNK:ENST00000269571, 	DOMAIN_UNK:ENST00000269571, 	DOMAIN_UNK:ENST00000267811, 	DOMAIN_UNK:ENST00000267811, 
0.0002	4353	SRR064438	chimerascan	2	0	M	M	1709	4262	237	368	+	-	TVAS5	DQ582201	4262	368	uc004cos.3|	uc004coq.3|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0108	4354	SRR064438	chimerascan	2	0	17	1	60536019	60637487	243219612	243260601	+	-	TLK1,TLK2	AL137733	60637487	243260601	uc010ddp.2|uc002izz.3|uc010wpd.1|uc002jaa.3|uc002izx.3|	uc001hzq.1|	breast_cancer	SRR064438,SRR064441,	breast_cancer,	5p_KINASE	ENST00000326270,	UnSpec,	UnSpec 	1:ENST00000326270, 	277:ENST00000326270, 	-1:UnSpec, 	-1:UnSpec, 	MMEELHSLDPRRQELLEARFTGVGVSKGPLNSESSNQSLCSVGSLSDKEVETPEKKQNDQRNRKRKAEPYETSQGKGTPRGHKISDYFEFAGGSAPGTSPGRSVPPVARSSPQHSLSNPLPRRVEQPLYGLDGSAAKEATEEQSALPTLMSVMLAKPRLDTEQLAQRGAGLCFTFVSAQQNSPSSTGSGNTEHSCSSQKQISIQHRQTQSDLTIEKISALENSKNSDLEKKEGRIDDLLRANCDLRRQIDEQQKMLEKYKERLNRCVTMSKKLLIEK:ENST00000326270-UnSpec, 	Intron:ENST00000326270, 	-1:UnSpec, 	CDS:ENST00000326270, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000326270, 	DOMAIN_UNK:ENST00000326270, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0348	4355	SRR064438	chimerascan	2	0	20	8	35973088	36033819	11679259	11696817	+	+	SRC	FDFT1	36033819	11679259	uc002xgy.2|uc002xgx.2|	uc011kxj.1|uc010lsb.2|uc010lsa.1|uc011kxk.1|uc003wui.2|uc003wuj.2|uc003wuk.2|uc011kxi.1|uc011kxh.1|uc003wuh.2|uc011kxe.1|	breast_cancer	SRR064286,SRR064438,	breast_cancer,	5p_KINASE	ENST00000373558,	ENST00000220584,	InFrame 	1:ENST00000373558, 	542:ENST00000373558, 	-1:ENST00000220584, 	-1:ENST00000220584, 	MGSNKSKPKDASQRRRSLEPAENVHGAGGGAFPASQTPSKPASADGHRGPSAAFAPAAAEPKLFGGFNSSDTVTSPQRAGPLAGGVTTFVALYDYESRTETDLSFKKGERLQIVNNTRKVDVREGDWWLAHSLSTGQTGYIPSNYVAPSDSIQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGENL:ENST00000373558-ENST00000220584, 	Intron:ENST00000373558, 	Intron:ENST00000220584, 	3UTR:ENST00000373558, 	CDS:ENST00000220584, 	Domain=SH3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00192,Domain=SH2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00191,Domain=Protein kinase;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00159,:ENST00000373558, 	NO_DOMAIN:ENST00000373558, 	DOMAIN_UNK:ENST00000220584, 	DOMAIN_UNK:ENST00000220584, 
0.0002	4356	SRR064438	chimerascan	2	0	1	1	144340526	144340773	145004781	145005286	-	+	LOC728855	BC065231	144340526	145004781	uc001ekv.2|uc001eks.2|uc001ekr.3|uc001ekt.3|	uc001emi.3|	breast_cancer	SRR064286,SRR064437,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	4357	SRR064438	chimerascan	2	0	9	1	35829222	35829388	32799441	32801834	+	-	TMEM8B	MARCKSL1	35829388	32801834	uc003zyk.2|	uc001bvd.2|	breast_cancer	SRR064438,	breast_cancer,	3p_KINASE																
0.0002	4358	SRR064438	chimerascan	2	0	4	1	175204828	175220361	16133657	16134194	+	-	KIAA1712	UQCRHL	175220361	16134194	uc003its.2|uc003itr.2|uc010iro.2|	uc009vol.1|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000296519,	UnSpec,	UnSpec 	1:ENST00000296519, 	30:ENST00000296519, 	-1:UnSpec, 	-1:UnSpec, 	MATGDLKRSLRNLEQVLRLLNYPEEVDCVG:ENST00000296519-UnSpec, 	Intron:ENST00000296519, 	-1:UnSpec, 	CDS:ENST00000296519, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000296519, 	DOMAIN_UNK:ENST00000296519, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4359	SRR064438	chimerascan	2	0	1	1	143744201	143744587	145004781	145005286	-	+	FLJ39739	BC065231	143744201	145004781	uc009whx.2|uc001ejr.3|uc001ejp.3|uc009why.2|	uc001emi.3|	breast_cancer	SRR064286,SRR064437,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE																
0.0003	4360	SRR064438	chimerascan	2	0	17	M	37006321	37009681	237	368	-	-	RPL23	DQ582201	37006321	368	uc002hqx.1|uc002hqw.1|	uc004coq.3|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000394333,	UnSpec,	FrameShift 	1:ENST00000394333, 	920:ENST00000394333, 	-1:UnSpec, 	-1:UnSpec, 	MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKGE*:ENST00000394333-UnSpec, 	Intron:ENST00000394333, 	-1:UnSpec, 	CDS:ENST00000394333, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000394333, 	DOMAIN_UNK:ENST00000394333, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.9894	4361	SRR064438	chimerascan	2	0	1	1	224491425	224517872	225674534	225718340	-	-	NVL	ENAH	224491425	225718340	uc001hol.2|uc010pvf.1|uc001hok.2|uc010pvd.1|uc010pve.1|	uc001hpc.1|uc001hpd.1|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000467882,	ENST00000284563,	InFrame 	1:ENST00000467882, 	294:ENST00000467882, 	136:ENST00000284563, 	817:ENST00000284563, 	MKPRPAGFVDNKLKQRVIQYLTSNKCGKYVDIGVLASDLQRVYSIDYGRRKRNAFRIQVEKVFSIISSEKELKNLTELEDEHLAKRARQGEEDNEYTESYSDDDSSMEDYPDPQSANHMNSSLLSLYRKGNPDSVSNTPEMEQRETTSSTPRISSKTGSIPLKTPAKDSEGGWFIDKTPSVKKDSFFLDLSCEKSNPKKPITEIQDSKDSSLLESDMKRKGKLKNKGSKRKKEDLQEVDGEIEAVLQKKGGLQDAHTHASPGGVPPPGRRAPSWSSPSWTTRLWEDITCTCNCWGPTLPRQNSQLPAQVQNGPSQEELEIQRRQLQEQQRQKELERERLERERMERERLERERLERERLERERLEQEQLERERQERERQERLERQERLERQERLERQERLDRERQERQERERLERLERERQERERQEQLEREQLEWERERRISSAAPSSDSSLYNAPLPEYSSCQPPSAPPPSYAKVISAPVSDATPDYAVVTALPPTSTPPTPPLRHSATRFATSLGSAFHPVLPHYATVPRPLNKNSRPSSPVNTPSSQPPATKPCAWSTSNFSPLPPSPPIMISSPPGKATGPRPVLPVCVSSPVPQMPPSPTAPNGLVDSVTYPVSPPPTSGPAAPPPPPPLPSLASLSHCGSQASPPPSTPIASTPSSKPSVLPSPSAAAPASVETPLNSVLGDSSASEPGLQAASQPAETPSQQGIVLGPLAPPPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPPPPPPPLPNQVPPPPPPPPAPPLPASGFFLASMSEDNRPLTGLAAAIAGAKLRKVSRMEDTSFPSGGNAIGVNSASSKTDTGRGNGPLPLGGSGLMEEMSALLARRRRIAEKGSTIETEQKEDKGEDSEPVTSKASSTSTPEPTRKPWERTNTMNGSKSPVISRPKSTPLSQPSANGVQTEGLDYDRLKQDILDEMRKELTKLKEELIDAIRQELSKSNTA:ENST00000467882-ENST00000284563, 	8:ENST00000467882, 	Intron:ENST00000284563, 	CDS:ENST00000467882, 	CDS:ENST00000284563, 	Domain=Nucleolin_bd;Ontology_term=ECO:0000259;evidence=ECO:0000259|Pfam:PF16725,:ENST00000467882, 	NO_DOMAIN:ENST00000467882, 	NO_DOMAIN:ENST00000284563, 	Domain=WH1;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50229,:ENST00000284563, 
0.0108	4362	SRR064438	chimerascan	2	0	17	3	60536019	60637487	197907626	197907735	+	+	TLK1,TLK2	FAM157A	60637487	197907626	uc010ddp.2|uc002izz.3|uc010wpd.1|uc002jaa.3|uc002izx.3|	uc011bup.1|uc011buq.1|	breast_cancer	SRR064438,SRR064440,SRR064441,	breast_cancer,	5p_KINASE	ENST00000326270,	UnSpec,	UnSpec 	1:ENST00000326270, 	277:ENST00000326270, 	-1:UnSpec, 	-1:UnSpec, 	MMEELHSLDPRRQELLEARFTGVGVSKGPLNSESSNQSLCSVGSLSDKEVETPEKKQNDQRNRKRKAEPYETSQGKGTPRGHKISDYFEFAGGSAPGTSPGRSVPPVARSSPQHSLSNPLPRRVEQPLYGLDGSAAKEATEEQSALPTLMSVMLAKPRLDTEQLAQRGAGLCFTFVSAQQNSPSSTGSGNTEHSCSSQKQISIQHRQTQSDLTIEKISALENSKNSDLEKKEGRIDDLLRANCDLRRQIDEQQKMLEKYKERLNRCVTMSKKLLIEK:ENST00000326270-UnSpec, 	Intron:ENST00000326270, 	-1:UnSpec, 	CDS:ENST00000326270, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000326270, 	DOMAIN_UNK:ENST00000326270, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0001	4363	SRR064438	chimerascan	2	0	22	17	29702997	29703143	48211102	48227383	+	-	GAS2L1	PPP1R9B	29703143	48227383	uc003afc.1|uc010gvm.1|uc003afb.1|uc003afd.1|	uc002iqh.3|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000341313,	UnSpec,	UnSpec 	0:ENST00000341313, 	0:ENST00000341313, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000341313-UnSpec, 	Intron:ENST00000341313, 	Intron:UnSpec, 	5UTR:ENST00000341313, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000341313, 	DOMAIN_UNK:ENST00000341313, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4364	SRR064438	chimerascan	2	0	20	20	57226328	57248767	57266782	57291367	+	+	STX16	NPEPL1	57248767	57266782	uc002xzi.2|uc010zzq.1|uc002xzk.2|uc002xzm.2|uc002xzl.2|uc002xzj.2|	uc010gjo.1|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000355957,	UnSpec,	UnSpec 	1:ENST00000355957, 	274:ENST00000355957, 	-1:UnSpec, 	-1:UnSpec, 	MATRRLTDAFLLLRNNSIQNRQLLAEQELDELADDRMALVSGISLDPEAAIGVTKRPPPKWVDGVDEIQYDVGRIKQKMKELASLHDKHLNRPTLDDSSEEEHAIEITTQEITQLFHRCQRAVQALPSRARACSEQEGRLLGNVVASLAQALQELSTSFRHAQSGYLKRMKNREERSQHFFDTSVPLMDDGDDNTLYHRGFTEDQLVLVEQNTLMVEEREREIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLHK:ENST00000355957-UnSpec, 	Intron:ENST00000355957, 	-1:UnSpec, 	CDS:ENST00000355957, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000355957, 	DOMAIN_UNK:ENST00000355957, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4365	SRR064438	chimerascan	2	0	7	7	75625656	75634722	75616303	75621875	-	-	MKSTYX,STYXL1,DKFZp686O05147	TMEM120A	75625656	75621875	uc003uef.2|uc003uel.2|uc003uek.3|uc011kgg.1|uc003uej.3|uc003ueh.2|uc011kgf.1|uc003uem.2|	uc003uee.2|uc003uec.2|	breast_cancer	SRR064438,	breast_cancer,	5p_KINASE	ENST00000248600,	UnSpec,	UnSpec 	0:ENST00000248600, 	0:ENST00000248600, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000248600-UnSpec, 	Intron:ENST00000248600, 	Intron:UnSpec, 	3UTR:ENST00000248600, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000248600, 	DOMAIN_UNK:ENST00000248600, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4366	SRR064438	chimerascan	2	0	1	1	149576453	149576700	145004781	145005286	+	+	BC110832,LOC728855	BC065231	149576700	145004781	uc001esk.3|uc009wlc.2|uc009wld.2|uc009wlb.1|uc001esl.3|	uc001emi.3|	breast_cancer	SRR064286,SRR064437,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	4367	SRR064438	chimerascan	2	0	M	M	12338	14645	8664	9990	+	+	MTND5	OK/SW-cl.16	14645	8664	uc004cox.3|	uc011mfi.1|	breast_cancer	SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,	NO_KINASE																
0.0002	4368	SRR064438	chimerascan	2	0	9	M	19378359	19379616	1709	4262	-	+	RPS6	TVAS5	19378359	1709	uc003znw.1|	uc004cos.3|	breast_cancer	SRR064438,SRR064441,	breast_cancer,	NO_KINASE	ENST00000315377,	UnSpec,	UnSpec 	1:ENST00000315377, 	136:ENST00000315377, 	-1:UnSpec, 	-1:UnSpec, 	MATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPLNKEGR:ENST00000315377-UnSpec, 	Intron:ENST00000315377, 	-1:UnSpec, 	CDS:ENST00000315377, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000315377, 	DOMAIN_UNK:ENST00000315377, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4369	SRR064438	chimerascan	2	0	1	1	144520774	144520993	145004781	145005286	-	+	LOC728875,BC021732	BC065231	144520774	145004781	uc001ela.3|uc001eky.3|uc001ekz.3|	uc001emi.3|	breast_cancer	SRR064438,SRR064439,SRR064440,	breast_cancer,	NO_KINASE																
0.0004	4370	SRR064438	chimerascan	2	0	M	9	237	368	100777646	100778222	-	+	DQ582201	ANP32B	237	100777646	uc004coq.3|	uc004aya.2|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000339399,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000339399, 	-1:ENST00000339399, 	GGRRWER*:UnSpec-ENST00000339399, 	-1:UnSpec, 	7:ENST00000339399, 	Intergenic:UnSpec, 	CDS:ENST00000339399, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000339399, 	DOMAIN_UNK:ENST00000339399, 
0.0002	4371	SRR064438	chimerascan	2	0	10	7	38691497	38691780	55840872	55841374	-	+	CDC10L	CO9	38691497	55840872	uc009xmd.1|	uc003tqy.2|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0108	4372	SRR064438	chimerascan	2	0	17	11	60536019	60637487	141453	169052	+	-	TLK1,TLK2	AL137655	60637487	169052	uc010ddp.2|uc002izz.3|uc010wpd.1|uc002jaa.3|uc002izx.3|	uc001lnz.2|	breast_cancer	SRR064438,SRR064440,	breast_cancer,	5p_KINASE	ENST00000326270,	UnSpec,	UnSpec 	1:ENST00000326270, 	277:ENST00000326270, 	-1:UnSpec, 	-1:UnSpec, 	MMEELHSLDPRRQELLEARFTGVGVSKGPLNSESSNQSLCSVGSLSDKEVETPEKKQNDQRNRKRKAEPYETSQGKGTPRGHKISDYFEFAGGSAPGTSPGRSVPPVARSSPQHSLSNPLPRRVEQPLYGLDGSAAKEATEEQSALPTLMSVMLAKPRLDTEQLAQRGAGLCFTFVSAQQNSPSSTGSGNTEHSCSSQKQISIQHRQTQSDLTIEKISALENSKNSDLEKKEGRIDDLLRANCDLRRQIDEQQKMLEKYKERLNRCVTMSKKLLIEK:ENST00000326270-UnSpec, 	Intron:ENST00000326270, 	-1:UnSpec, 	CDS:ENST00000326270, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000326270, 	DOMAIN_UNK:ENST00000326270, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4373	SRR064438	chimerascan	2	0	19	M	11071598	11152236	1709	4262	+	+	SMARCA4	TVAS5	11152236	1709	uc010dxp.2|uc010dxo.2|uc002mqf.3|uc010dxq.2|uc002mqj.3|	uc004cos.3|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000344626,	UnSpec,	UnSpec 	1:ENST00000344626, 	1475:ENST00000344626, 	-1:UnSpec, 	-1:UnSpec, 	MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQGPGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDR:ENST00000344626-UnSpec, 	Intron:ENST00000344626, 	-1:UnSpec, 	CDS:ENST00000344626, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000344626, 	DOMAIN_UNK:ENST00000344626, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4374	SRR064438	chimerascan	2	0	7	M	54825188	54826939	1709	4262	-	+	SEC61G	TVAS5	54825188	1709	uc003tqg.2|	uc004cos.3|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000352861,	UnSpec,	UnSpec 	1:ENST00000352861, 	31:ENST00000352861, 	-1:UnSpec, 	-1:UnSpec, 	MDQVMQFVEPSRQFVKDSIRLVKRCTKPDRK:ENST00000352861-UnSpec, 	2:ENST00000352861, 	-1:UnSpec, 	CDS:ENST00000352861, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000352861, 	DOMAIN_UNK:ENST00000352861, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0108	4375	SRR064438	chimerascan	2	0	17	1	60536019	60637487	700237	709660	+	-	TLK1,TLK2	BC006361	60637487	709660	uc010ddp.2|uc002izz.3|uc010wpd.1|uc002jaa.3|uc002izx.3|	uc001abo.2|	breast_cancer	SRR064438,SRR064441,	breast_cancer,	5p_KINASE	ENST00000326270,	UnSpec,	UnSpec 	1:ENST00000326270, 	277:ENST00000326270, 	-1:UnSpec, 	-1:UnSpec, 	MMEELHSLDPRRQELLEARFTGVGVSKGPLNSESSNQSLCSVGSLSDKEVETPEKKQNDQRNRKRKAEPYETSQGKGTPRGHKISDYFEFAGGSAPGTSPGRSVPPVARSSPQHSLSNPLPRRVEQPLYGLDGSAAKEATEEQSALPTLMSVMLAKPRLDTEQLAQRGAGLCFTFVSAQQNSPSSTGSGNTEHSCSSQKQISIQHRQTQSDLTIEKISALENSKNSDLEKKEGRIDDLLRANCDLRRQIDEQQKMLEKYKERLNRCVTMSKKLLIEK:ENST00000326270-UnSpec, 	Intron:ENST00000326270, 	-1:UnSpec, 	CDS:ENST00000326270, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000326270, 	DOMAIN_UNK:ENST00000326270, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.9894	4376	SRR064439	chimerascan	58	17	17	17	35479453	35656692	37366790	37374426	-	-	ACACA	STAC2	35479453	37374426	uc010wdc.1|uc002hno.2|uc002hnn.2|uc010cuy.2|uc002hnl.2|uc010cuy.2|uc002hno.2|uc002hnl.2|uc002hnn.2|uc002hnk.2|uc010cuy.2|uc002hno.2|uc002hnk.2|uc002hnm.2|uc002hnl.2|uc002hnk.2|uc010wdc.1|uc002hnm.2|uc010wdc.1|uc002hnm.2|uc002hnn.2|	uc010cvt.2|uc002hrs.2|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000353139,ENST00000335166,	ENST00000333461,	InFrame 	1:ENST00000353139,ENST00000335166, 	2045:ENST00000353139, 1930:ENST00000335166, 	30:ENST00000333461, 	411:ENST00000333461, 	MSGLHLVKQGRDRKKIDSQRDFTVASPAEFVTRFGGNKVIEKVLIANNGIAAVKCMRSIRRWSYEMFRNERAIRFVVMVTPEDLKANAEYIKMADHYVPVPGGPNNNNYANVELILDIAKRIPVQAVWAGWGHASENPKLPELLLKNGIAFMGPPSQAMWALGDKIASSIVAQTAGIPTLPWSGSGLRVDWQENDFSKRILNVPQELYEKGYVKDVDDGLQAAEEVGYPVMIKASEGGGGKGIRKVNNADDFPNLFRQVQAEVPGSPIFVMRLAKQSRHLEVQILADQYGNAISLFGRDCSVQRRHQKIIEEAPATIATPAVFEHMEQCAVKLAKMVGYVSAGTVEYLYSQDGSFYFLELNPRLQVEHPCTEMVADVNLPAAQLQIAMGIPLYRIKDIRMMYGVSPWGDSPIDFEDSAHVPCPRGHVIAARITSENPDEGFKPSSGTVQELNFRSNKNVWGYFSVAAAGGLHEFADSQFGHCFSWGENREEAISNMVVALKELSIRGDFRTTVEYLIKLLETESFQMNRIDTGWLDRLIAEKVQAERPDTMLGVVCGALHVADVSLRNSVSNFLHSLERGQVLPAHTLLNTVDVELIYEGVKYVLKVTRQSPNSYVVIMNGSCVEVDVHRLSDGGLLLSYDGSSYTTYMKEEVDRYRITIGNKTCVFEKENDPSVMRSPSAGKLIQYIVEDGGHVFAGQCYAEIEVMKMVMTLTAVESGCIHYVKRPGAALDPGCVLAKMQLDNPSKVQQAELHTGSLPRIQSTALRGEKLHRVFHYVLDNLVNVMNGYCLPDPFFSSKVKDWVERLMKTLRDPSLPLLELQDIMTSVSGRIPPNVEKSIKKEMAQYASNITSVLCQFPSQQIANILDSHAATLNRKSEREVFFMNTQSIVQLVQRYRSGIRGHMKAVVMDLLRQYLRVETQFQNGHYDKCVFALREENKSDMNTVLNYIFSHAQVTKKNLLVTMLIDQLCGRDPTLTDELLNILTELTQLSKTTNAKVALRARQVLIASHLPSYELRHNQVESIFLSAIDMYGHQFCIENLQKLILSETSIFDVLPNFFYHSNQVVRMAALEVYVRRAYIAYELNSVQHRQLKDNTCVVEFQFMLPTSHPNRGNIPTLNRMSFSSNLNHYGMTHVASVSDVLLDNSFTPPCQRMGGMVSFRTFEDFVRIFDEVMGCFSDSPPQSPTFPEAGHTSLYDEDKVPRDEPIHILNVAIKTDCDIEDDRLAAMFREFTQQNKATLVDHGIRRLTFLVAQKDFRKQVNYEVDRRFHREFPKFFTFRARDKFEEDRIYRHLEPALAFQLELNRMRNFDLTAIPCANHKMHLYLGAAKVEVGTEVTDYRFFVRAIIRHSDLVTKEASFEYLQNEGERLLLEAMDELEVAFNNTNVRTDCNHIFLNFVPTVIMDPSKIEESVRSMVMRYGSRLWKLRVLQAELKINIRLTPTGKAIPIRLFLTNESGYYLDISLYKEVTDSRTAQIMFQAYGDKQGPLHGMLINTPYVTKDLLQSKRFQAQSLGTTYIYDIPEMFRQSLIKLWESMSTQAFLPSPPLPSDMLTYTELVLDDQGQLVHMNRLPGGNEIGMVAWKMTFKSPEYPEGRDIIVIGNDITYRIGSFGPQEDLLFLRASELARAEGIPRIYVSANSGARIGLAEEIRHMFHVAWVDPEDPYKGYRYLYLTPQDYKRVSALNSVHCEHVEDEGESRYKITDIIGKEEGIGPENLRGSGMIAGESSLAYNEIITISLVTCRAIGIGAYLVRLGQRTIQVENSHLILTGAGALNKVLGREVYTSNNQLGGIQIMHNNGVTHCTVCDDFEGVFTVLHWLSYMPKSVHSSVPLLNSKDPIDRIIEFVPTKTPYDPRWMLAGRPHPTQKGQWLSGFFDYGSFSEIMQPWAQTVVVGRARLGGIPVGVVAVETRTVELSIPADPANLDSEAKLQRFKRSLSLKTILRSKSLENFFLRSGSELKCPTEVLLTPPTPLPPPSPPPTASDRGLATPSPSPCPVPRPLAALKPVRLHSFQEHVFKRASPCELCHQLIVGNSKQGLRCKMCKVSVHLWCSEEISHQQCPGKTSTSFRRNFSSPLLVHEPPPVCATSKESPPTGDSGKVDPVYETLRYGTSLALMNRSSFSSTSESPTRSLSERDELTEDGEGSIRSSEEGPGDSASPVFTAPAESEGPGPEEKSPGQQLPKATLRKDVGPMYSYVALYKFLPQENNDLALQPGDRIMLVDDSNEDWWKGKIGDRVGFFPANFVQRVRPGENVWRCCQPFSGNKEQGYMSLKENQICVGVGRSKDADGFIRVSSGKKRGLVPVDALTEI:ENST00000335166-ENST00000333461, MWWSTLMSILRARSFWKWISTQTVRIIRAVRAHFGGIMDEPSPLAQPLELNQHSRFIIGSVSEDNSEDEISNLVKLDLLEEKEGSLSPASVGSDTLSDLGISSLQDGLALHIRSSMSGLHLVKQGRDRKKIDSQRDFTVASPAEFVTRFGGNKVIEKVLIANNGIAAVKCMRSIRRWSYEMFRNERAIRFVVMVTPEDLKANAEYIKMADHYVPVPGGPNNNNYANVELILDIAKRIPVQAVWAGWGHASENPKLPELLLKNGIAFMGPPSQAMWALGDKIASSIVAQTAGIPTLPWSGSGLRVDWQENDFSKRILNVPQELYEKGYVKDVDDGLQAAEEVGYPVMIKASEGGGGKGIRKVNNADDFPNLFRQVQAEVPGSPIFVMRLAKQSRHLEVQILADQYGNAISLFGRDCSVQRRHQKIIEEAPATIATPAVFEHMEQCAVKLAKMVGYVSAGTVEYLYSQDGSFYFLELNPRLQVEHPCTEMVADVNLPAAQLQIAMGIPLYRIKDIRMMYGVSPWGDSPIDFEDSAHVPCPRGHVIAARITSENPDEGFKPSSGTVQELNFRSNKNVWGYFSVAAAGGLHEFADSQFGHCFSWGENREEAISNMVVALKELSIRGDFRTTVEYLIKLLETESFQMNRIDTGWLDRLIAEKVQAERPDTMLGVVCGALHVADVSLRNSVSNFLHSLERGQVLPAHTLLNTVDVELIYEGVKYVLKVTRQSPNSYVVIMNGSCVEVDVHRLSDGGLLLSYDGSSYTTYMKEEVDRYRITIGNKTCVFEKENDPSVMRSPSAGKLIQYIVEDGGHVFAGQCYAEIEVMKMVMTLTAVESGCIHYVKRPGAALDPGCVLAKMQLDNPSKVQQAELHTGSLPRIQSTALRGEKLHRVFHYVLDNLVNVMNGYCLPDPFFSSKVKDWVERLMKTLRDPSLPLLELQDIMTSVSGRIPPNVEKSIKKEMAQYASNITSVLCQFPSQQIANILDSHAATLNRKSEREVFFMNTQSIVQLVQRYRSGIRGHMKAVVMDLLRQYLRVETQFQNGHYDKCVFALREENKSDMNTVLNYIFSHAQVTKKNLLVTMLIDQLCGRDPTLTDELLNILTELTQLSKTTNAKVALRARQVLIASHLPSYELRHNQVESIFLSAIDMYGHQFCIENLQKLILSETSIFDVLPNFFYHSNQVVRMAALEVYVRRAYIAYELNSVQHRQLKDNTCVVEFQFMLPTSHPNRGNIPTLNRMSFSSNLNHYGMTHVASVSDVLLDNSFTPPCQRMGGMVSFRTFEDFVRIFDEVMGCFSDSPPQSPTFPEAGHTSLYDEDKVPRDEPIHILNVAIKTDCDIEDDRLAAMFREFTQQNKATLVDHGIRRLTFLVAQKDFRKQVNYEVDRRFHREFPKFFTFRARDKFEEDRIYRHLEPALAFQLELNRMRNFDLTAIPCANHKMHLYLGAAKVEVGTEVTDYRFFVRAIIRHSDLVTKEASFEYLQNEGERLLLEAMDELEVAFNNTNVRTDCNHIFLNFVPTVIMDPSKIEESVRSMVMRYGSRLWKLRVLQAELKINIRLTPTGKAIPIRLFLTNESGYYLDISLYKEVTDSRTAQIMFQAYGDKQGPLHGMLINTPYVTKDLLQSKRFQAQSLGTTYIYDIPEMFRQSLIKLWESMSTQAFLPSPPLPSDMLTYTELVLDDQGQLVHMNRLPGGNEIGMVAWKMTFKSPEYPEGRDIIVIGNDITYRIGSFGPQEDLLFLRASELARAEGIPRIYVSANSGARIGLAEEIRHMFHVAWVDPEDPYKGYRYLYLTPQDYKRVSALNSVHCEHVEDEGESRYKITDIIGKEEGIGPENLRGSGMIAGESSLAYNEIITISLVTCRAIGIGAYLVRLGQRTIQVENSHLILTGAGALNKVLGREVYTSNNQLGGIQIMHNNGVTHCTVCDDFEGVFTVLHWLSYMPKSVHSSVPLLNSKDPIDRIIEFVPTKTPYDPRWMLAGRPHPTQKGQWLSGFFDYGSFSEIMQPWAQTVVVGRARLGGIPVGVVAVETRTVELSIPADPANLDSEAKLQRFKRSLSLKTILRSKSLENFFLRSGSELKCPTEVLLTPPTPLPPPSPPPTASDRGLATPSPSPCPVPRPLAALKPVRLHSFQEHVFKRASPCELCHQLIVGNSKQGLRCKMCKVSVHLWCSEEISHQQCPGKTSTSFRRNFSSPLLVHEPPPVCATSKESPPTGDSGKVDPVYETLRYGTSLALMNRSSFSSTSESPTRSLSERDELTEDGEGSIRSSEEGPGDSASPVFTAPAESEGPGPEEKSPGQQLPKATLRKDVGPMYSYVALYKFLPQENNDLALQPGDRIMLVDDSNEDWWKGKIGDRVGFFPANFVQRVRPGENVWRCCQPFSGNKEQGYMSLKENQICVGVGRSKDADGFIRVSSGKKRGLVPVDALTEI:ENST00000353139-ENST00000333461, 	49:ENST00000353139, 48:ENST00000335166, 	Intron:ENST00000333461, 	CDS:ENST00000353139,ENST00000335166, 	CDS:ENST00000333461, 	NO_DOMAIN:ENST00000353139,ENST00000335166, 	NO_DOMAIN:ENST00000353139,ENST00000335166, 	Domain=SH3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00192,:ENST00000333461, 	NO_DOMAIN:ENST00000333461, 
0.0002	4377	SRR064439	chimerascan	29	14	17	17	48943419	48943706	35874901	35880751	-	-	TOB1	SYNRG	48943419	35880751	uc010wmy.1|	uc010wde.1|uc002hoc.2|uc010wdg.1|uc010wdf.1|uc010wdg.1|uc002hoa.2|uc002hoc.2|uc002hoa.2|uc010wdf.1|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000268957,	ENST00000339208,	FrameShift 	-1:ENST00000268957, 	-1:ENST00000268957, 	-1:ENST00000339208, 	-1:ENST00000339208, 	MYGGFVPEEHSWSTRARPVDTLLLDFPLFPVRV*:ENST00000268957-ENST00000339208, 	Intron:ENST00000268957, 	Intron:ENST00000339208, 	5UTR:ENST00000268957, 	CDS:ENST00000339208, 	DOMAIN_UNK:ENST00000268957, 	DOMAIN_UNK:ENST00000268957, 	NO_DOMAIN:ENST00000339208, 	NO_DOMAIN:ENST00000339208, 
0.0001	4378	SRR064439	chimerascan	28	11	17	17	57970443	57970686	47007461	47021337	+	-	RPS6KB1	SNF8	57970686	47021337	uc010ddj.1|uc010won.1|uc010wom.1|uc002ixy.2|	uc002iok.2|uc002ioj.2|uc002iok.2|uc002ioj.2|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	5p_KINASE	ENST00000406116,ENST00000225577,ENST00000425292,ENST00000393021,	ENST00000507302,ENST00000514929,ENST00000502492,ENST00000290330,	FrameShift 	1:ENST00000406116,ENST00000225577,ENST00000425292,ENST00000393021, 	47:ENST00000406116,ENST00000225577,ENST00000425292,ENST00000393021, 	-1:ENST00000507302,ENST00000514929,ENST00000502492,ENST00000290330, 	-1:ENST00000507302,ENST00000514929,ENST00000502492,ENST00000290330, 	MRRRRRRDGFYPAPDFRDREAEDMAGVFDIDLDQPEDAGSEDELEEGGPSIRSEGRSWLRTS*:ENST00000406116-ENST00000507302,ENST00000406116-ENST00000514929,ENST00000406116-ENST00000502492,ENST00000425292-ENST00000507302,ENST00000225577-ENST00000514929,ENST00000425292-ENST00000290330,ENST00000225577-ENST00000507302,ENST00000425292-ENST00000514929,ENST00000393021-ENST00000507302,ENST00000425292-ENST00000502492,ENST00000393021-ENST00000514929,ENST00000406116-ENST00000290330,ENST00000225577-ENST00000290330,ENST00000393021-ENST00000290330,ENST00000225577-ENST00000502492,ENST00000393021-ENST00000502492, 	Intron:ENST00000406116,ENST00000225577,ENST00000425292,ENST00000393021, 	Intron:ENST00000507302,ENST00000514929,ENST00000502492,ENST00000290330, 	CDS:ENST00000406116,ENST00000225577,ENST00000425292,ENST00000393021, 	CDS:ENST00000507302,ENST00000514929,ENST00000502492,ENST00000290330, 	NO_DOMAIN:ENST00000406116,ENST00000225577,ENST00000425292,ENST00000393021, 	Domain=Protein kinase;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00159,Domain=AGC-kinase C-terminal,Region=Autoinhibitory domain,:ENST00000406116,ENST00000225577,ENST00000393021, NO_DOMAIN:ENST00000425292, 	NO_DOMAIN:ENST00000507302,ENST00000514929,ENST00000502492,ENST00000290330, 	NO_DOMAIN:ENST00000507302,ENST00000514929,ENST00000502492,ENST00000290330, 
0.0002	4379	SRR064439	chimerascan	28	7	20	17	56964245	56964573	37921201	37934020	+	-	VAP-B	ZNFN1A3,IKZF3	56964573	37934020	uc002xzb.2|	uc010cwd.2|uc002hsu.2|uc010wel.1|uc010cwg.2|uc002hsx.2|uc002hsz.2|uc002htd.2|uc010cwh.2|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000346243,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000346243, 	-1:ENST00000346243, 	ASAEARHIKAEMGSERALVLDRLASNVAKRKSSMPQKFIGKNTNLFPAVVSR*:UnSpec-ENST00000346243, 	-1:UnSpec, 	Intron:ENST00000346243, 	Intergenic:UnSpec, 	CDS:ENST00000346243, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000346243, 	DOMAIN_UNK:ENST00000346243, 
0.0004	4380	SRR064439	chimerascan	25	5	20	20	45852970	45867893	34078463	34099802	-	+	ZMYND8,KIAA1125	CEP250	45852970	34078463	uc002xtf.1|uc002xsx.1|uc002xtf.1|uc002xsr.1|uc002xtb.1|uc002xsv.1|uc002xtb.1|uc002xte.1|uc010zya.1|uc002xsy.1|uc002xsx.1|uc010ghr.1|uc002xss.2|uc002xte.1|uc002xsv.1|uc002xsz.1|uc002xst.1|uc002xsr.1|uc010zxz.1|uc010zxy.1|uc002xst.1|uc002xsw.1|uc002xsu.1|uc010zxy.1|uc002xsy.1|uc002xtd.1|uc002xta.1|uc002xsz.1|uc002xss.2|uc002xtc.1|uc010ghq.1|uc002xtd.1|uc002xtc.1|uc010zxz.1|uc010zya.1|uc010ghq.1|uc002xta.1|uc002xsw.1|uc010ghr.1|uc002xsu.1|	uc010zve.1|uc002xcm.2|uc010zve.1|uc002xcm.2|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	5p_KINASE	ENST00000311275,ENST00000471951,ENST00000396281,ENST00000262975,	ENST00000356095,ENST00000397527,	FrameShift 	1:ENST00000311275,ENST00000471951,ENST00000396281,ENST00000262975, 	1020:ENST00000262975, 1086:ENST00000471951, 1065:ENST00000311275,ENST00000396281, 	-1:ENST00000356095,ENST00000397527, 	-1:ENST00000356095,ENST00000397527, 	MDISTRSKDPGSAERTAQKRKFPSPPHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKEQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYLAACQKRDNWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVENIRRKFGVFNYSPFRTPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVKLNFDMTASPKILMSKPVLSGGTGRRISLSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSSKFQTSSQKWHMQKMQRQQQQQQQQNQQQQPQSSQGTRYQTRQAVKAVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSRRSAPGTSRSWQRLWRA*:ENST00000396281-ENST00000397527,ENST00000396281-ENST00000356095,ENST00000311275-ENST00000356095,ENST00000311275-ENST00000397527, MDISTRSKDPGSAERTAQKRKFPSPPHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKEQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYLAACQKRDNWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVENIRRKFGVFNYSPFRTPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVKLNFDMTASPKILMSKPVLSGGTGRRISLSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLGHRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSRRSAPGTSRSWQRLWRA*:ENST00000262975-ENST00000397527,ENST00000262975-ENST00000356095, MHPQSLAEEEIKTEQEVVEGMDISTRSKDPGSAERTAQKRKFPSPPHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKEQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYLAACQKRDNWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVENIRRKFGVFNYSPFRTPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVKLNFDMTASPKILMSKPVLSGGTGRRISLSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLGHRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSSKFQTSSQKWHMQKMQRQQQQQQQQNQQQQPQSSQGTRYQTRQAVKAVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSRRSAPGTSRSWQRLWRA*:ENST00000471951-ENST00000356095,ENST00000471951-ENST00000397527, 	19:ENST00000311275,ENST00000471951,ENST00000396281, 20:ENST00000262975, 	22:ENST00000356095, 21:ENST00000397527, 	CDS:ENST00000311275,ENST00000471951,ENST00000396281,ENST00000262975, 	CDS:ENST00000356095,ENST00000397527, 	Domain=Bromo;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00035,Domain=PWWP;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00162,:ENST00000311275,ENST00000471951,ENST00000396281,ENST00000262975, 	Region=Interacts with PRKCB1,:ENST00000311275,ENST00000471951,ENST00000396281,ENST00000262975, 	NO_DOMAIN:ENST00000356095,ENST00000397527, 	NO_DOMAIN:ENST00000356095,ENST00000397527, 
0.0002	4381	SRR064439	chimerascan	10	0	M	M	12338	14645	8664	9990	+	+	MTND5	OK/SW-cl.16	14645	8664	uc004cox.3|	uc011mfi.1|	breast_cancer	SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,	NO_KINASE																
0.0002	4382	SRR064439	chimerascan	9	3	17	17	37607291	37607527	53218671	53241449	-	+	MED1	STXBP4	37607291	53218671	uc002hru.2|uc010wee.1|uc002hrv.3|	uc010dcd.1|uc002iuf.1|uc002iuf.1|uc010dcd.1|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000300651,ENST00000394287,	ENST00000376352,ENST00000434978,	FrameShift 	1:ENST00000300651,ENST00000394287, 	8:ENST00000300651,ENST00000394287, 	-1:ENST00000376352,ENST00000434978, 	-1:ENST00000376352,ENST00000434978, 	MKAQGETEFTLWVGGSLHSRWNQVLHQSCNTDYILDPSRDECPESISLRGE*:ENST00000394287-ENST00000434978,ENST00000394287-ENST00000376352,ENST00000300651-ENST00000434978,ENST00000300651-ENST00000376352, 	1:ENST00000300651,ENST00000394287, 	16:ENST00000434978, 17:ENST00000376352, 	CDS:ENST00000300651,ENST00000394287, 	CDS:ENST00000376352,ENST00000434978, 	Region=Interaction with the Mediator complex and THRA,:ENST00000300651,ENST00000394287, 	Region=Interaction with ESR1,Region=Interaction with the Mediator complex,Region=Interaction with the Mediator complex,Region=Interaction with THRA,Region=Interaction with VDR,Region=Interaction with PPARGC1A and THRA,Region=Interaction with ESR1,Region=Interaction with GATA1;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24245781;Dbxref=PMID:24245781,Region=Interaction with TP53,:ENST00000300651,ENST00000394287, 	NO_DOMAIN:ENST00000376352,ENST00000434978, 	Domain=PDZ (DHR);Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50106,Domain=WW;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50020,:ENST00000434978, Domain=PDZ;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=WW;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00224,:ENST00000376352, 
0.0002	4383	SRR064439	chimerascan	8	0	M	M	14762	15888	1709	4262	+	+	cytochrome_b	TVAS5	15888	1709	uc004coy.2|	uc004cos.3|	breast_cancer	SRR064438,SRR064439,SRR064440,	breast_cancer,	NO_KINASE																
0.0002	4384	SRR064439	chimerascan	8	0	M	M	10579	12138	1709	4262	+	+	STRF6	TVAS5	12138	1709	uc004cov.3|	uc004cos.3|	breast_cancer	SRR064439,SRR064441,	breast_cancer,	NO_KINASE																
0.0002	4385	SRR064439	chimerascan	8	0	M	M	12338	14645	1709	4262	+	+	MTND5	TVAS5	14645	1709	uc004cox.3|	uc004cos.3|	breast_cancer	SRR064286,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,	NO_KINASE																
0.0002	4386	SRR064439	chimerascan	7	0	7	7	45798673	45808617	55840872	55841374	-	+	SEPT13	CO9	45798673	55840872	uc003tnf.3|uc003tnh.2|uc003tnh.2|uc003tnf.3|	uc003tqy.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0004	4387	SRR064439	chimerascan	6	1	20	19	56884771	56886178	17256207	17324103	+	+	RAB22A	MYO9B	56886178	17256207	uc002xyz.2|	uc002nfi.2|uc010eak.2|uc002nfj.1|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000244040,	ENST00000397274,ENST00000319396,	FrameShift 	1:ENST00000244040, 	39:ENST00000244040, 	-1:ENST00000397274,ENST00000319396, 	-1:ENST00000397274,ENST00000319396, 	MALRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGLLEMPRQPTTTTPAGLGNSSKSAT*:ENST00000244040-ENST00000319396,ENST00000244040-ENST00000397274, 	Intron:ENST00000244040, 	2:ENST00000397274,ENST00000319396, 	CDS:ENST00000244040, 	CDS:ENST00000397274,ENST00000319396, 	NO_DOMAIN:ENST00000244040, 	NO_DOMAIN:ENST00000244040, 	NO_DOMAIN:ENST00000397274,ENST00000319396, 	Domain=Ras-associating;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00166,Domain=Myosin motor,Domain=IQ 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=IQ 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=IQ 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=IQ 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=Rho-GAP;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00172,Region=Actin-binding;Ontology_term=ECO:0000305;evidence=ECO:0000305,Region=Neck or regulatory domain;Ontology_term=ECO:0000305;evidence=ECO:0000305,Region=Tail;Ontology_term=ECO:0000305;evidence=ECO:0000305,Region=Interaction with RHOA;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:26529257;Dbxref=PMID:26529257,:ENST00000397274, NO_DOMAIN:ENST00000319396, 
0.0022	4388	SRR064439	chimerascan	6	0	4	4	77507293	77507622	77631309	77704403	+	+	AK097800	SHROOM3,hShrmL	77507622	77631309	uc011cby.1|uc011cby.1|	uc011cbz.1|uc011cbx.1|uc003hkf.1|uc011cbx.1|uc011cbz.1|	breast_cancer	SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000264907,	InFrame 	-1:UnSpec, 	-1:UnSpec, 	107:ENST00000264907, 	1995:ENST00000264907, 	DVCTDPGHADTGASNFVSPEHLTSGPQHRKAAWSGGVKLRLKHRRSEPAGRPHSWHTTKSGEKQPDASMMQISQGMIGPPWHQSYHSSSSTSDLSNYDHAYLRRSPDQCSSQGSMESLEPSGAYPPCHLSPAKSTGSIDQLSHFHNKRDSAYSSFSTSSSILEYPHPGISGRERSGSMDNTSARGGLLEGMRQADIRYVKTVYDTRRGVSAEYEVNSSALLLQGREARASANGQGYDKWSNIPRGKGVPPPSWSQQCPSSLETATDNLPPKVGAPLPPARSDSYAAFRHRERPSSWSSLDQKRLCRPQANSLGSLKSPFIEEQLHTVLEKSPENSPPVKPKHNYTQKAQPGQPLLPTSIYPVPSLEPHFAQVPQPSVSSNGMLYPALAKESGYIAPQGACNKMATIDENGNQNGSGRPGFAFCQPLEHDLLSPVEKKPEATAKYVPSKVHFCSVPENEEDASLKRHLTPPQGNSPHSNERKSTHSNKPSSHPHSLKCPQAQAWQAGEDKRSSRLSEPWEGDFQEDHNANLWRRLEREGLGQSLSGNFGKTKSAFSSLQNIPESLRRHSSLELGRGTQEGYPGGRPTCAVNTKAEDPGRKAAPDLGSHLDRQVSYPRPEGRTGASASFNSTDPSPEEPPAPSHPHTSSLGRRGPGPGSASALQGFQYGKPHCSVLEKVSKFEQREQGSQRPSVGGSGFGHNYRPHRTVSTSSTSGNDFEETKAHIRFSESAEPLGNGEQHFKNGELKLEEASRQPCGQQLSGGASDSGRGPQRPDARLLRSQSTFQLSSEPEREPEWRDRPGSPESPLLDAPFSRAYRNSIKDAQSRVLGATSFRRRDLELGAPVASRSWRPRPSSAHVGLRSPEASASASPHTPRERHSVTPAEGDLARPVPPAARRGARRRLTPEQKKRSYSEPEKMNEVGIVEEAEPAPLGPQRNGMRFPESSVADRRRLFERDGKACSTLSLSGPELKQFQQSALADYIQRKTGKRPTSAAGCSLQEPGPLRERAQSAYLQPGPAALEGSGLASASSLSSLREPSLQPRREATLLPATVAETQQAPRDRSSSFAGGRRLGERRRGDLLSGANGGTRGTQRGDETPREPSSWGARAGKSMSAEDLLERSDVLAGPVHVRSRSSPATADKRQDVLLGQDSGFGLVKDPCYLAGPGSRSLSCSERGQEEMLPLFHHLTPRWGGSGCKAIGDSSVPSECPGTLDHQRQASRTPCPRPPLAGTQGLVTDTRAAPLTPIGTPLPSAIPSGYCSQDGQTGRQPLPPYTPAMMHRSNGHTLTQPPGPRGCEGDGPEHGVEEGTRKRVSLPQWPPPSRAKWAHAAREDSLPEESSAPDFANLKHYQKQQSLPSLCSTSDPDTPLGAPSTPGRISLRISESVLRDSPPPHEDYEDEVFVRDPHPKATSSPTFEPLPPPPPPPPSQETPVYSMDDFPPPPPHTVCEAQLDSEDPEGPRPSFNKLSKVTIARERHMPGAAHVVGSQTLASRLQTSIKGSEAESTPPSFMSVHAQLAGSLGGQPAPIQTQSLSHDPVSGTQGLEKKVSPDPQKSSEDIRTEALAKEIVHQDKSLADILDPDSRLKTTMDLMEGLFPRDVNLLKENSVKRKAIQRTVSSSGCEGKRNEDKEAVSMLVNCPAYYSVSAPKAELLNKIKEMPAEVNEEEEQADVNEKKAELIGSLTHKLETLQEAKGSLLTDIKLNNALGEEVEALISELCKPNEFDKYRMFIGDLDKVVNLLLSLSGRLARVENVLSGLGEDASNEERSSLYEKRKILAGQHEDARELKENLDRRERVVLGILANYLSEEQLQDYQHFVKMKSTLLIEQRKLDDKIKLGQEQVKCLLESLPSDFIPKAGALALPPNLTSEPIPAGGCTFSGIFPTLTSPL:UnSpec-ENST00000264907, 	-1:UnSpec, 	3:ENST00000264907, 	Intergenic:UnSpec, 	CDS:ENST00000264907, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000264907, 	DOMAIN_UNK:ENST00000264907, 
0.0002	4389	SRR064439	chimerascan	6	0	17	17	57232317	57232800	34851600	34863763	-	-	SKA2,FAM33A	MYO19	57232317	34863763	uc002ixd.2|uc002ixe.2|uc010dde.1|	uc010wcy.1|uc010wcz.1|uc010cuu.2|uc010wcz.1|uc010cuu.2|uc010wcz.1|uc010wcy.1|uc010cuu.2|uc010wcy.1|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000437036,	ENST00000431794,ENST00000268852,ENST00000415126,ENST00000378326,	FrameShift 	1:ENST00000437036, 	42:ENST00000437036, 	-1:ENST00000431794,ENST00000268852,ENST00000415126,ENST00000378326, 	-1:ENST00000431794,ENST00000268852,ENST00000415126,ENST00000378326, 	MASEVGHNLESPETPGGGGWTRVEFPPPAPKGAATVWCLNRLGPAGCVWI*:ENST00000437036-ENST00000415126,ENST00000437036-ENST00000431794,ENST00000437036-ENST00000268852,ENST00000437036-ENST00000378326, 	1:ENST00000437036, 	Intron:ENST00000431794,ENST00000268852,ENST00000415126,ENST00000378326, 	CDS:ENST00000437036, 	CDS:ENST00000431794,ENST00000268852,ENST00000415126,ENST00000378326, 	NO_DOMAIN:ENST00000437036, 	NO_DOMAIN:ENST00000437036, 	NO_DOMAIN:ENST00000431794,ENST00000268852,ENST00000415126,ENST00000378326, 	NO_DOMAIN:ENST00000431794,ENST00000268852,ENST00000415126,ENST00000378326, 
0.1351	4390	SRR064439	chimerascan	5	1	2	2	85804648	85806290	85818848	85820511	+	+	VAMP8	VAMP5	85806290	85818848	uc002spt.3|uc002spt.3|	uc002spu.1|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000263864,ENST00000409760,	ENST00000306384,	InFrame 	1:ENST00000263864,ENST00000409760, 	54:ENST00000263864,ENST00000409760, 	2:ENST00000306384, 	116:ENST00000306384, 	MEEASEGGGNDRVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATAGIELERCQQQANEVTEIMRNNFGKVLERGVKLAELQQRSDQLLDMSSTFNKTTQNLAQKKCWENIRYRICVGLVVVGVLLIILIVLLVVFLPQSSDSSSAPRTQDAGIASGPGN:ENST00000263864-ENST00000306384,ENST00000409760-ENST00000306384, 	Intron:ENST00000263864,ENST00000409760, 	2:ENST00000306384, 	CDS:ENST00000263864,ENST00000409760, 	CDS:ENST00000306384, 	Domain=V-SNARE coiled-coil homology;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50892,:ENST00000409760, Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=v-SNARE coiled-coil homology;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00290,:ENST00000263864, 	NO_DOMAIN:ENST00000409760, Topological domain=Vesicular;Ontology_term=ECO:0000255;evidence=ECO:0000255,:ENST00000263864, 	Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Vesicular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=v-SNARE coiled-coil homology;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00290,:ENST00000306384, 	NO_DOMAIN:ENST00000306384, 
0.0002	4391	SRR064439	chimerascan	5	1	M	1	1709	4262	569327	570349	+	+	TVAS5	CR615613	4262	569327	uc004cos.3|	uc001abc.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0004	4392	SRR064439	chimerascan	5	1	3	3	33055548	33138314	32483332	32496333	-	+	GLB1	CMTM7	33055548	32483332	uc003cfh.1|uc003cfi.1|uc011axk.1|uc003cfj.1|	uc003cey.1|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000307363,	ENST00000454304,ENST00000349718,ENST00000334983,	FrameShift 	1:ENST00000307363, 	577:ENST00000307363, 	-1:ENST00000454304,ENST00000349718,ENST00000334983, 	-1:ENST00000454304,ENST00000349718,ENST00000334983, 	MPGFLVRILPLLLVLLLLGPTRGLRNATQRMFEIDYSRDSFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEYFLRLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKESILLRSSDPDYLAAVDKWLGVLLPKMKPLLYQNGGPVITVQVENEYGSYFACDFDYLRFLQKRFRHHLGDDVVLFTTDGAHKTFLKCGALQGLYTTVDFGTGSNITDAFLSQRKCEPKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASVNLYMFIGGTNFAYWNGANSPYAAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKFEKVPEGPIPPSTPKFAYGKVTLEKLKTVGAALDILCPSGPIKSLYPLTFIQVKQHYGFVLYRTTLPQDCSNPAPLSSPLNGVHDRAYVAVDGIPQGVLERNNVITLNITGKAGATLDLLVENMGRVNYGAYINDFKGLVSNLTLSSNILTDWTIFPLDTEDAVCSHLGGWGHRDSGHHDEAWAHNSSNYTLPAFYMGNFSIPSGIPDLPQDTFIQFPGWTNHPADCLHLCAELPVDQLQRLQLL*:ENST00000307363-ENST00000454304,ENST00000307363-ENST00000349718,ENST00000307363-ENST00000334983, 	15:ENST00000307363, 	2:ENST00000454304,ENST00000349718,ENST00000334983, 	CDS:ENST00000307363, 	CDS:ENST00000454304,ENST00000349718,ENST00000334983, 	NO_DOMAIN:ENST00000307363, 	NO_DOMAIN:ENST00000307363, 	NO_DOMAIN:ENST00000454304,ENST00000349718,ENST00000334983, 	Domain=MARVEL;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00581,:ENST00000349718,ENST00000334983, Domain=MARVEL;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS51225,:ENST00000454304, 
0.0002	4393	SRR064439	chimerascan	5	0	4	4	76649460	76649795	76567955	76587233	-	-	AK311578	G3BP2	76649460	76587233	uc010iiy.2|	uc003his.2|uc003hit.2|	breast_cancer	SRR064287,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,	NO_KINASE																
0.0238	4394	SRR064439	chimerascan	5	0	20	20	57226328	57227194	55929768	55953518	+	+	STX16	RAE1	57227194	55929768	uc002xzm.2|	uc002xyh.2|uc002xyg.2|uc002xyi.2|uc010gis.1|uc002xyh.2|uc002xyg.2|uc010git.1|uc002xyi.2|uc010git.1|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000355957,ENST00000435446,ENST00000361830,ENST00000361770,ENST00000371141,ENST00000371132,ENST00000358029,	ENST00000395841,ENST00000395840,ENST00000371242,	InFrame 	1:ENST00000355957,ENST00000435446,ENST00000361830,ENST00000361770,ENST00000371141,ENST00000371132,ENST00000358029, 	44:ENST00000355957,ENST00000435446,ENST00000361830,ENST00000361770,ENST00000371141,ENST00000371132,ENST00000358029, 	31:ENST00000395841,ENST00000395840,ENST00000371242, 	368:ENST00000395841,ENST00000395840,ENST00000371242, 	MATRRLTDAFLLLRNNSIQNRQLLAEQVSSHITSSPLHSRSIAADIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNKK:ENST00000371141-ENST00000371242,ENST00000361830-ENST00000395841,ENST00000371141-ENST00000395840,ENST00000361770-ENST00000395841,ENST00000361770-ENST00000371242,ENST00000371132-ENST00000371242,ENST00000358029-ENST00000371242,ENST00000435446-ENST00000371242,ENST00000371132-ENST00000395840,ENST00000361830-ENST00000395840,ENST00000358029-ENST00000395841,ENST00000371132-ENST00000395841,ENST00000358029-ENST00000395840,ENST00000361770-ENST00000395840,ENST00000361830-ENST00000371242,ENST00000435446-ENST00000395841,ENST00000355957-ENST00000371242,ENST00000355957-ENST00000395840,ENST00000355957-ENST00000395841,ENST00000435446-ENST00000395840,ENST00000371141-ENST00000395841, 	Intron:ENST00000355957,ENST00000435446,ENST00000361830,ENST00000361770,ENST00000371141,ENST00000371132,ENST00000358029, 	3:ENST00000395841,ENST00000395840,ENST00000371242, 	CDS:ENST00000355957,ENST00000435446,ENST00000361830,ENST00000361770,ENST00000371141,ENST00000371132,ENST00000358029, 	CDS:ENST00000395841,ENST00000395840,ENST00000371242, 	NO_DOMAIN:ENST00000435446,ENST00000361770, Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,:ENST00000355957,ENST00000361830,ENST00000371141,ENST00000371132,ENST00000358029, 	Domain=T-SNARE coiled-coil homology;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50192,:ENST00000361770, NO_DOMAIN:ENST00000435446, Topological domain=Vesicular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=t-SNARE coiled-coil homology;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00202,:ENST00000355957,ENST00000361830,ENST00000371141,ENST00000371132,ENST00000358029, 	Repeat=WD 1;Ontology_term=ECO:0000255,ECO:0000269;evidence=ECO:0000255|PROSITE-ProRule:PRU00221,ECO:0000269|PubMed:20498086;Dbxref=PMID:20498086,Repeat=WD 2;Ontology_term=ECO:0000255,ECO:0000269;evidence=ECO:0000255|PROSITE-ProRule:PRU00221,ECO:0000269|PubMed:20498086;Dbxref=PMID:20498086,Repeat=WD 3;Ontology_term=ECO:0000255,ECO:0000269;evidence=ECO:0000255|PROSITE-ProRule:PRU00221,ECO:0000269|PubMed:20498086;Dbxref=PMID:20498086,Repeat=WD 4;Ontology_term=ECO:0000255,ECO:0000269;evidence=ECO:0000255|PROSITE-ProRule:PRU00221,ECO:0000269|PubMed:20498086;Dbxref=PMID:20498086,Repeat=WD 5;Ontology_term=ECO:0000255,ECO:0000269;evidence=ECO:0000255|PROSITE-ProRule:PRU00221,ECO:0000269|PubMed:20498086;Dbxref=PMID:20498086,Repeat=WD 6;Ontology_term=ECO:0000255,ECO:0000269;evidence=ECO:0000255|PROSITE-ProRule:PRU00221,ECO:0000269|PubMed:20498086;Dbxref=PMID:20498086,Repeat=WD 7;Ontology_term=ECO:0000255,ECO:0000269;evidence=ECO:0000255|PROSITE-ProRule:PRU00221,ECO:0000269|PubMed:20498086;Dbxref=PMID:20498086,:ENST00000395841,ENST00000395840,ENST00000371242, 	NO_DOMAIN:ENST00000395841,ENST00000395840,ENST00000371242, 
0.9957	4395	SRR064439	chimerascan	4	1	17	20	37793412	37793484	53259997	53267709	+	+	STARD3	DOK5	37793484	53259997	uc010weg.1|uc002hse.2|uc010wei.1|uc010weh.1|uc002hsd.2|	uc002xwy.2|uc002xwz.2|uc010gin.2|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	3p_KINASE	ENST00000336308,	ENST00000262593,	InFrame 	-1:ENST00000336308, 	-1:ENST00000336308, 	242:ENST00000262593, 	306:ENST00000262593, 	MEQVQMKMSERAASLSTMVPLPRSAYWQHITRQHSTGQLYRLQDVSSPLKLHRTETFPAYRSEH:ENST00000336308-ENST00000262593, 	Intron:ENST00000336308, 	7:ENST00000262593, 	5UTR:ENST00000336308, 	CDS:ENST00000262593, 	DOMAIN_UNK:ENST00000336308, 	DOMAIN_UNK:ENST00000336308, 	NO_DOMAIN:ENST00000262593, 	Domain=PH,Domain=IRS-type PTB;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00389,:ENST00000262593, 
0.1392	4396	SRR064439	chimerascan	4	1	20	20	61569148	61569274	36611425	36634799	-	-	DIDO1	KIAA0406	61569148	36634799	uc002ydu.1|uc002yds.1|uc002ydx.1|	uc002xhl.2|uc002xhl.2|uc002xhm.2|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000266070,	ENST00000373447,	FrameShift 	-1:ENST00000266070, 	-1:ENST00000266070, 	-1:ENST00000373447, 	-1:ENST00000373447, 	MAAAEALERGNLEPGWRRLH*:ENST00000266070-ENST00000373447, 	1:ENST00000266070, 	Intron:ENST00000373447, 	5UTR:ENST00000266070, 	CDS:ENST00000373447, 	DOMAIN_UNK:ENST00000266070, 	DOMAIN_UNK:ENST00000266070, 	NO_DOMAIN:ENST00000373447, 	NO_DOMAIN:ENST00000373447, 
0.0002	4397	SRR064439	chimerascan	4	0	1	1	162039581	162335359	162351520	162356608	+	+	KIAA0464,NOS1AP	C1orf226	162335359	162351520	uc009wut.1|uc001gbw.2|uc001gbv.2|uc010pks.1|	uc001gby.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000361897,	UnSpec,	UnSpec 	1:ENST00000361897, 	368:ENST00000361897, 	-1:UnSpec, 	-1:UnSpec, 	MPSKTKYNLVDDGHDLRIPLHNEDAFQHGICFEAKYVGSLDVPRPNSRVEIVAAMRRIRYEFKAKNIKKKKVSIMVSVDGVKVILKKKKKLLLLQKKEWTWDESKMLVMQDPIYRIFYVSHDSQDLKIFSYIARDGASNIFRCNVFKSKKKSQAMRIVRTVGQAFEVCHKLSLQHTQQNADGQEDGESERNSNSSGDPGRQLTGAERASTATAEETDIDAVEVPLPGNDVLEFSRGVTDLDAVGKEGGSHTGSKVSHPQEPMLTASPRMLLPSSSSKPPGLGTETPLSTHHQMQLLQQLLQQQQQQTQVAVAQVHLLKDQLAAEAAARLEAQARVHQLLLQNKDMLQHISLLVKQVQELELKLSGQNA:ENST00000361897-UnSpec, 	Intron:ENST00000361897, 	-1:UnSpec, 	CDS:ENST00000361897, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000361897, 	DOMAIN_UNK:ENST00000361897, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4398	SRR064439	chimerascan	4	0	4	4	159091916	159092632	159119940	159123393	+	+	AK126266	AK096792,AK126266	159092632	159119940	uc003ipt.1|	uc003ipu.1|uc003ipv.1|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0005	4399	SRR064439	chimerascan	4	0	13	13	113951469	113951810	113718618	113752863	+	+	LAMP1	MCF2L	113951810	113718618	uc010tka.1|uc001vtm.1|	uc001vsr.2|uc001vss.3|uc010tjs.1|uc001vsq.2|uc001vst.1|uc001vsu.2|uc010tjr.1|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000332556,ENST00000397181,	ENST00000434480,ENST00000442652,ENST00000397030,ENST00000375597,ENST00000375591,ENST00000375601,ENST00000375608,ENST00000421756,ENST00000375604,	FrameShift 	1:ENST00000332556,ENST00000397181, 	20:ENST00000332556,ENST00000397181, 	-1:ENST00000434480,ENST00000442652,ENST00000397030,ENST00000375597,ENST00000375591,ENST00000375601,ENST00000375608,ENST00000421756,ENST00000375604, 	-1:ENST00000434480,ENST00000442652,ENST00000397030,ENST00000375597,ENST00000375591,ENST00000375601,ENST00000375608,ENST00000421756,ENST00000375604, 	MAAPGSARRPLLLLLLLLLLGHNAELRTRLTRLHR*:ENST00000397181-ENST00000434480,ENST00000397181-ENST00000375601,ENST00000397181-ENST00000375604,ENST00000332556-ENST00000434480,ENST00000397181-ENST00000375591,ENST00000332556-ENST00000375604,ENST00000332556-ENST00000375597,ENST00000332556-ENST00000375591,ENST00000332556-ENST00000442652,ENST00000397181-ENST00000421756,ENST00000332556-ENST00000421756,ENST00000332556-ENST00000375608,ENST00000397181-ENST00000375597,ENST00000397181-ENST00000442652,ENST00000332556-ENST00000397030,ENST00000397181-ENST00000375608,ENST00000397181-ENST00000397030,ENST00000332556-ENST00000375601, 	Intron:ENST00000332556,ENST00000397181, 	6:ENST00000434480,ENST00000442652,ENST00000375601,ENST00000421756,ENST00000397030,ENST00000375604,ENST00000375597, 4:ENST00000375591, 7:ENST00000375608, 	CDS:ENST00000332556,ENST00000397181, 	CDS:ENST00000434480,ENST00000442652,ENST00000397030,ENST00000375597,ENST00000375591,ENST00000375601,ENST00000375608,ENST00000421756,ENST00000375604, 	NO_DOMAIN:ENST00000332556,ENST00000397181, 	NO_DOMAIN:ENST00000397181, Topological domain=Lumenal;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00740,Region=First lumenal domain,Region=Hinge,Region=Second lumenal domain,:ENST00000332556, 	NO_DOMAIN:ENST00000434480,ENST00000442652,ENST00000397030,ENST00000375597,ENST00000375591,ENST00000375601,ENST00000375608,ENST00000421756,ENST00000375604, 	Domain=CRAL-TRIO;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00056,Repeat=Spectrin,Domain=DH;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00062,Domain=PH;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00145,Domain=SH3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00192,:ENST00000375608,ENST00000421756,ENST00000397030,ENST00000375604,ENST00000375597, NO_DOMAIN:ENST00000434480,ENST00000375591,ENST00000442652,ENST00000375601, 
0.0002	4400	SRR064439	chimerascan	4	0	12	8	124824552	125020157	22463598	22477975	-	+	NCOR2	KIAA1967	124824552	22463598	uc010taz.1|uc010tay.1|	uc003xch.2|uc003xci.2|uc003xch.2|uc003xci.2|	breast_cancer	SRR064439,SRR064441,	breast_cancer,	NO_KINASE	ENST00000356219,	ENST00000389279,ENST00000521301,ENST00000308511,	FrameShift 	1:ENST00000356219, 	1902:ENST00000356219, 	-1:ENST00000389279,ENST00000521301,ENST00000308511, 	-1:ENST00000389279,ENST00000521301,ENST00000308511, 	MSGSTQPVAQTWRATEPRYPPHSLSYPVQIARTHTDVGLLEYQHHSRDYASHLSPGSIIQPQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEFIESKRPRLELLPDPLLRPSPLLATGQPAGSEDLTKDRSLTGKLEPVSPPSPPHTDPELELVPPRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESKHRSLVQIIYDENRKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLILYFKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQRELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDADQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYKSLVRRSYRRRGKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDEKEKEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRITRSMANEANSEEAITPQQSAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVEDEEMEASGVSGNEEEMVEEAEALHASGNEVPRGECSGPATVNNSSDTESIPSPHTEAAKDTGQNGPKPPATLGADGPPPGPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPPVVPKEEKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEAAEATAEGALKAEKKEGGSGRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLSPRPSLLTPTGDPRANASPQKPLDLKQLKQRAAAIPPIVTKVHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAEAQKLPGDPPCWTSGLPFPVPPREVIKASPHAPDPSAFSYAPPGHPLPLGLHDTARPVLPRPPTISNPPPLISSAKHPSVLERQIGAISQGMSVQLHVPYSEHAKAPVGPVTMGLPLPMDPKKLAPFSGVKQEQLSPRGQAGPPESLGVPTAQEASVLRGTALGSVPGGSITKGIPSTRVPSDSAITYRGSITHGTPADVLYKGTITRIIGEDSPSRLDRGREDSLPKGHVIYEGKKGHVLSYEGGMSVTQCSKEDGRSSSGPPHETAAPKRTYDMMEGRVGRAISSASIEGLMGRAIPPERHSPHHLKEQHHIRGSITQGIPRSYVEAQEDYLRREAKLLKREGTPPPPPPSRDLTEAYKTQALGPLKLKPAHEGLVATVKEAGRSIHEIPREELRHTPELPLAPRPLKEGSITQGTPLKYDTGASTTGSKKHDVRSLIGSPGRTFPPVHPLDVMADARALERACYEESLKSRPGTASSSGGSIARGAPVIVPELGKPRQSPLTYEDHGAPFAGHLPRGSPVTTREPTPRLQEGSLSSSKASQDRKLTSTPREIAKSPHSTVPEHHPHPISPYEHLLRGVSGVDLYRSHIPLAFDPTSIPRGIPLDAAAAYYLPRHLAPNPTYPHLYPPYLIRGYPDTAALENRQTIINDYITSQQMHHNAATAMAQRADMLRGLSPRESSLALNYAAGPRGIIDLSQVPHLPVLVPPTPGTPATAMDRLAYLPTAPQPFSSRHSSSPLSPGGPTHLTKPTTTSSSERERDRDRERDRDREREKSILTSTTTVEHAPIWRPGTEQSSGSSGGGGGSSSRPASHSHAHQHSPISPRTQDALQQRPSVLHNTGMKGIITAVEPSTPTVLTQLQHLFWALLLVCSLLLWPQNCPRMPGTFRVGRNSGSSLVLLPACMTTLGLWMKRSFFS*:ENST00000356219-ENST00000521301,ENST00000356219-ENST00000308511,ENST00000356219-ENST00000389279, 	38:ENST00000356219, 	3:ENST00000389279,ENST00000521301,ENST00000308511, 	CDS:ENST00000356219, 	CDS:ENST00000389279,ENST00000521301,ENST00000308511, 	Domain=SANT 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00624,Domain=SANT 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00624,Region=Interaction with SIN3A/B;Ontology_term=ECO:0000250;evidence=ECO:0000250,:ENST00000356219, 	Region=Required for interaction with RARA in the absence of its ligand,:ENST00000356219, 	NO_DOMAIN:ENST00000389279,ENST00000521301,ENST00000308511, 	Domain=S1-like;Ontology_term=ECO:0000259;evidence=ECO:0000259|Pfam:PF14444,:ENST00000521301, Region=Interaction with MCC;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24824780;Dbxref=PMID:24824780,Region=Interaction with NR1D1;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:23398316;Dbxref=PMID:23398316,:ENST00000389279,ENST00000308511, 
0.0002	4401	SRR064439	chimerascan	4	0	M	M	14762	15888	8664	9990	+	+	cytochrome_b	OK/SW-cl.16	15888	8664	uc004coy.2|	uc011mfi.1|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0001	4402	SRR064439	chimerascan	3	2	7	7	64126511	64139714	64144713	64147263	+	+	ZNF107	BC053669	64139714	64144713	uc003tte.2|	uc003ttf.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000344930,	UnSpec,	UnSpec 	0:ENST00000344930, 	0:ENST00000344930, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000344930-UnSpec, 	Intron:ENST00000344930, 	Intron:UnSpec, 	5UTR:ENST00000344930, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000344930, 	DOMAIN_UNK:ENST00000344930, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0003	4403	SRR064439	chimerascan	3	2	20	20	62496590	62500794	62559688	62565394	+	+	TPD52L2	DNAJC5,FLJ00118	62500794	62559688	uc002ygz.2|uc002ygy.2|uc002yha.2|uc002yhd.2|uc002yhb.2|uc002yhc.2|uc011abl.1|	uc002yhh.2|uc002yhf.2|uc002yhf.2|uc002yhg.1|uc002yhh.2|uc002yhg.1|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000217121,	ENST00000360864,	FrameShift 	1:ENST00000217121, 	55:ENST00000217121, 	-1:ENST00000360864, 	-1:ENST00000360864, 	MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKDSLTWQTRDSAHCLPLGSHCTTSLGWTRTQPQMTLKSPIGSLP*:ENST00000217121-ENST00000360864, 	Intron:ENST00000217121, 	-1:ENST00000360864, 	CDS:ENST00000217121, 	5UTR:ENST00000360864, 	DOMAIN_UNK:ENST00000217121, 	DOMAIN_UNK:ENST00000217121, 	DOMAIN_UNK:ENST00000360864, 	DOMAIN_UNK:ENST00000360864, 
0.0003	4404	SRR064439	chimerascan	3	2	17	17	60129898	60142643	59469338	59470198	-	+	MED13	BCAS3	60129898	59469338	uc002izo.2|	uc002iyu.3|uc002iyw.3|uc002izd.3|uc002iyy.3|uc002iyv.3|uc002izc.3|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000262436,ENST00000397786,	ENST00000390652,ENST00000407086,ENST00000408905,	FrameShift 	1:ENST00000262436,ENST00000397786, 	154:ENST00000262436, 156:ENST00000397786, 	-1:ENST00000390652,ENST00000407086,ENST00000408905, 	-1:ENST00000390652,ENST00000407086,ENST00000408905, 	MSASFVPNGASLEDCHCNLFCLADLTGIKWKKYVWQGPTSAPILFPVTEEDPILSSFSRCLKADVLGVWRRDQRPGRRELWIFWWGEDPSFADLIHHDLSEEEDGVWENGLSYECRTLLFKAVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKNFSEREASRL*:ENST00000397786-ENST00000408905,ENST00000397786-ENST00000390652,ENST00000397786-ENST00000407086, MSASFVPNGASLEDCHCNLFCLADLTGIKWKKYVWQGPTSAPILFPVTEEDPILSSFSRCLKADVLGVWRRDQRPGRRELWIFWWGEDPLLTLFTMTYQKKKMECGRMDFPMNAVLCFSKVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKNFSEREASRL*:ENST00000262436-ENST00000408905,ENST00000262436-ENST00000390652,ENST00000262436-ENST00000407086, 	3:ENST00000397786, 5:ENST00000262436, 	24:ENST00000390652, 23:ENST00000408905, 26:ENST00000407086, 	CDS:ENST00000262436,ENST00000397786, 	CDS:ENST00000390652,ENST00000407086,ENST00000408905, 	NO_DOMAIN:ENST00000262436,ENST00000397786, 	NO_DOMAIN:ENST00000262436,ENST00000397786, 	NO_DOMAIN:ENST00000390652,ENST00000407086,ENST00000408905, 	Repeat=WD 1,Repeat=WD 2,Repeat=WD 3,Repeat=WD 4,Repeat=WD 5,Repeat=WD 6,Repeat=WD 7,:ENST00000390652,ENST00000407086,ENST00000408905, 
0.0002	4405	SRR064439	chimerascan	3	1	11	11	1775033	1785222	1756060	1769349	-	-	CTSD	CR626060	1775033	1769349	uc009yda.1|uc001luc.1|	uc001lub.1|	breast_cancer	SRR064287,SRR064439,	breast_cancer,	NO_KINASE	ENST00000236671,	UnSpec,	UnSpec 	1:ENST00000236671, 	356:ENST00000236671, 	-1:UnSpec, 	-1:UnSpec, 	MQPSSLLPLALCLLAAPASALVRIPLHKFTSIRRTMSEVGGSVEDLIAKGPVSKYSQAVPAVTEGPIPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCQSASSASALGGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTDSKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPLIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTL:ENST00000236671-UnSpec, 	8:ENST00000236671, 	-1:UnSpec, 	CDS:ENST00000236671, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000236671, 	DOMAIN_UNK:ENST00000236671, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4406	SRR064439	chimerascan	3	1	20	20	57226328	57248767	57266780	57291367	+	+	STX16	NPEPL1	57248767	57266780	uc002xzi.2|uc010zzq.1|uc002xzk.2|uc002xzm.2|uc002xzl.2|uc002xzj.2|	uc002xzn.2|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000355957,	UnSpec,	UnSpec 	1:ENST00000355957, 	274:ENST00000355957, 	-1:UnSpec, 	-1:UnSpec, 	MATRRLTDAFLLLRNNSIQNRQLLAEQELDELADDRMALVSGISLDPEAAIGVTKRPPPKWVDGVDEIQYDVGRIKQKMKELASLHDKHLNRPTLDDSSEEEHAIEITTQEITQLFHRCQRAVQALPSRARACSEQEGRLLGNVVASLAQALQELSTSFRHAQSGYLKRMKNREERSQHFFDTSVPLMDDGDDNTLYHRGFTEDQLVLVEQNTLMVEEREREIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLHK:ENST00000355957-UnSpec, 	Intron:ENST00000355957, 	-1:UnSpec, 	CDS:ENST00000355957, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000355957, 	DOMAIN_UNK:ENST00000355957, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4407	SRR064439	chimerascan	4	0	11	7	50257351	50257623	55840872	55841374	-	+	LOC441601	CO9	50257351	55840872	uc001nhd.2|	uc003tqy.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4408	SRR064439	chimerascan	3	0	7	7	77325213	77326662	77313168	77314643	-	-	BC037783	AF290475	77325213	77314643	uc003ugj.1|	uc003ugk.3|uc003ugk.3|	breast_cancer	SRR064286,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,	NO_KINASE																
0.0002	4409	SRR064439	chimerascan	3	0	5	10	85578262	85589152	73576056	73580092	+	-	NBPF22P	PSAP	85589152	73580092	uc003kiq.2|	uc001jsl.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000357471,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000357471, 	-1:ENST00000357471, 	EARGPSKV*:UnSpec-ENST00000357471, 	-1:UnSpec, 	Intron:ENST00000357471, 	Intergenic:UnSpec, 	CDS:ENST00000357471, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000357471, 	DOMAIN_UNK:ENST00000357471, 
0.0004	4410	SRR064439	chimerascan	3	0	19	17	18654292	18654387	57987923	58027784	-	+	FKBP8	RPS6KB1	18654292	57987923	uc002njl.1|uc002njm.1|uc010ebr.1|	uc010won.1|uc010ddj.1|uc002ixy.2|	breast_cancer	SRR064439,	breast_cancer,	3p_KINASE	ENST00000222308,	ENST00000225577,	FrameShift 	-1:ENST00000222308, 	-1:ENST00000222308, 	-1:ENST00000225577, 	-1:ENST00000225577, 	MKAWTMGELDHMNLAWNIVRNLKSQKLV*:ENST00000222308-ENST00000225577, 	Intron:ENST00000222308, 	2:ENST00000225577, 	5UTR:ENST00000222308, 	CDS:ENST00000225577, 	DOMAIN_UNK:ENST00000222308, 	DOMAIN_UNK:ENST00000222308, 	NO_DOMAIN:ENST00000225577, 	Domain=Protein kinase;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00159,Domain=AGC-kinase C-terminal,Region=Autoinhibitory domain,:ENST00000225577, 
0.0002	4411	SRR064439	chimerascan	3	0	19	M	39971052	39976447	1709	4262	+	+	TIMM50	TVAS5	39976447	1709	uc002olu.1|	uc004cos.3|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000314349,	UnSpec,	UnSpec 	1:ENST00000314349, 	267:ENST00000314349, 	-1:UnSpec, 	-1:UnSpec, 	MASALSLGNKCDPFLRCVLCRGGGALQGPRGRGPDDFESQLSPPGSARRLVRSKRACGNPPDAFGLSRASVHPPLPRVSIGCSSGPGRAKRERVGGAAWRQRKMAASAAVFSRLRSGLRLGSRGLCTRLATPPRRAPDQAAEIGSRGSTKAQGPQQQPGSEGPSYAKKVALWLAGLLGAGGTVSVVYIFGNNPVDENGAKIPDEFDNDPILVQQLRRTYKYFKDYRQMIIEPTSPCLLPDPLQEPYYQPPYTLVLELTGVLLHPEWS:ENST00000314349-UnSpec, 	Intron:ENST00000314349, 	-1:UnSpec, 	CDS:ENST00000314349, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000314349, 	DOMAIN_UNK:ENST00000314349, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4412	SRR064439	chimerascan	3	0	X	M	2609228	2637746	1709	4262	+	+	CD99	TVAS5	2637746	1709	uc004cqn.2|uc004cqo.2|uc010nda.2|	uc004cos.3|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000381184,	UnSpec,	UnSpec 	1:ENST00000381184, 	64:ENST00000381184, 	-1:UnSpec, 	-1:UnSpec, 	MARGAALALLLFGLLGVLVAAPDGGFDLSDALPDNENKKPTAIPKKPSAGDDFDLGDAVVDGEN:ENST00000381184-UnSpec, 	Intron:ENST00000381184, 	-1:UnSpec, 	CDS:ENST00000381184, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000381184, 	DOMAIN_UNK:ENST00000381184, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4413	SRR064439	chimerascan	3	0	M	M	7587	8295	1709	4262	+	+	X64709	TVAS5	8295	1709	uc004cou.3|	uc004cos.3|	breast_cancer	SRR064438,SRR064439,SRR064440,	breast_cancer,	NO_KINASE																
0.0002	4414	SRR064439	chimerascan	3	0	20	20	42939616	42939889	33890383	33902568	-	-	FITM2	MST118,UQCC	42939616	33902568	uc002xlr.1|	uc002xce.2|uc010zuy.1|uc002xcg.2|uc010zuz.1|uc002xcd.2|uc010zvb.1|uc002xcf.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000396825,	ENST00000374384,ENST00000359226,ENST00000374380,ENST00000374385,ENST00000349714,	FrameShift 	1:ENST00000396825, 	57:ENST00000396825, 	-1:ENST00000374384,ENST00000359226,ENST00000374380,ENST00000374385,ENST00000349714, 	-1:ENST00000374384,ENST00000359226,ENST00000374380,ENST00000374385,ENST00000349714, 	MEHLERCEWLLRGTLVRAAVRRYLPWALVASMLAGSLLKELSPLPESYLSNKRNVLNGLIPIS*:ENST00000396825-ENST00000374380,ENST00000396825-ENST00000359226,ENST00000396825-ENST00000374384,ENST00000396825-ENST00000349714,ENST00000396825-ENST00000374385, 	1:ENST00000396825, 	Intron:ENST00000374384,ENST00000359226,ENST00000374380,ENST00000374385,ENST00000349714, 	CDS:ENST00000396825, 	CDS:ENST00000374384,ENST00000359226,ENST00000374380,ENST00000374385,ENST00000349714, 	Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,:ENST00000396825, 	NO_DOMAIN:ENST00000396825, 	NO_DOMAIN:ENST00000374384,ENST00000359226,ENST00000374380,ENST00000374385,ENST00000349714, 	NO_DOMAIN:ENST00000374384,ENST00000359226,ENST00000374380,ENST00000374385,ENST00000349714, 
0.0001	4415	SRR064439	chimerascan	3	0	22	17	29702997	29703143	48211102	48227383	+	-	GAS2L1	PPP1R9B	29703143	48227383	uc003afc.1|uc010gvm.1|uc003afb.1|uc003afd.1|	uc002iqh.3|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000341313,	UnSpec,	UnSpec 	0:ENST00000341313, 	0:ENST00000341313, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000341313-UnSpec, 	Intron:ENST00000341313, 	Intron:UnSpec, 	5UTR:ENST00000341313, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000341313, 	DOMAIN_UNK:ENST00000341313, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4416	SRR064439	chimerascan	3	0	M	M	15999	16571	8664	9990	+	+	AF079515	OK/SW-cl.16	16571	8664	uc004coz.1|	uc011mfi.1|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4417	SRR064439	chimerascan	3	0	Y	M	2559228	2587746	1709	4262	+	+	CD99	TVAS5	2587746	1709	uc010nwa.2|uc004fqa.2|uc004fqb.2|	uc004cos.3|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4418	SRR064439	chimerascan	3	0	M	M	5855	7427	1709	4262	+	+	BC018860	TVAS5	7427	1709	uc011mfh.1|	uc004cos.3|	breast_cancer	SRR064439,SRR064441,	breast_cancer,	NO_KINASE																
0.9894	4419	SRR064439	chimerascan	3	0	1	10	108769301	108786703	73576056	73580092	-	-	NBPF6,NBPF4	PSAP	108769301	73580092	uc001dvo.2|uc009weo.2|	uc001jsl.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000370038,ENST00000415641,	ENST00000373120,ENST00000394940,ENST00000357471,	InFrame 	1:ENST00000370038,ENST00000415641, 	624:ENST00000370038,ENST00000415641, 	306:ENST00000357471, 303:ENST00000373120,ENST00000394940, 	559:ENST00000373120,ENST00000394940, 527:ENST00000357471, 	MVVSADPLSSERAEMNILEINQELRSQLAESNQQFRDLKEKFLITQATAYSLANQLKKYKCEEYKDIIDSVLRDELQSMEKLAEKLRQAEELRQYKALVHSQAKELTQLREKLREGRDASRWLNKHLKTLLTPDDPDKSQGQDLREQLAEGHRLAEHLVHKLSPENDEDEDEDEDDKDEEVEKVQESPAPREVQKTEEKEVPQDSLEECAVTCSNSHNPSNSNQPHRSTKITFKEHEVDSALVVESEHPHDEEEEALNIPPENQNDHEEEEGKAPVPPRHHDKSNSYRHREVSFLALDEQKVCSAQDVARDYSNPKWDETSLGFLEKQSDLEEVKGQETVAPRLSRGPLRVDKHEIPQESLDGCCLTPSILPDLTPSYHPYWSTLYSFEDKQVSLALVDKIKKDQEEIEDQSPPCPRLSQELPEVKEQEVPEDSVNEVYLTPSVHHDVSDCHQPYSSTLSSLEDQLACSALDVASPTEAACPQGTWSGDLSHHQSEVQVSQAQLEPSTLVPSCLRLQLDQGFHCGNGLAQRGLSSTTCSFSANADSGNQWPFQELVLEPSLGMKNPPQLEDDALEGSASNTQGRQVTGRIRASLVLILKTIRRRLPFSKWRLAFRFAGPHAESAEKHEVPAKSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTRLPALTVHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEKCIWGPSYWCQNTETAAQCNAVEHCKRHVWN:ENST00000370038-ENST00000357471, MVVSADPLSSERAEMNILEINQELRSQLAESNQQFRDLKEKFLITQATAYSLANQLKKYKCEEYKDIIDSVLRDELQSMEKLAEKLRQAEELRQYKALVHSQAKELTQLREKLREGRDASRWLNKHLKTLLTPDDPDKSQGQDLREQLAEGHRLAEHLVHKLSPENDEDEDEDEDDKDEEVEKVQESPAPREVQKTEEKEVPQDSLEECAVTCSNSHNPSNSNQPHRSTKITFKEHEVDSALVVESEHPHDEEEEALNIPPENQNDHEEEEGKAPVPPRHHDKSNSYRHREVSFLALDEQKVCSAQDVARDYSNPKWDETSLGFLEKQSDLEEVKGQETVAPRLSRGPLRVDKHEIPQESLDGCCLTPSILPDLTPSYHPYWSTLYSFEDKQVSLALVDKIKKDQEEIEDQSPPCPRLSQELPEVKEQEVPEDSVNEVYLTPSVHHDVSDCHQPYSSTLSSLEDQLACSALDVASPTEAACPQGTWSGDLSHHQSEVQVSQAQLEPSTLVPSCLRLQLDQGFHCGNGLAQRGLSSTTCSFSANADSGNQWPFQELVLEPSLGMKNPPQLEDDALEGSASNTQGRQVTGRIRASLVLILKTIRRRLPFSKWRLAFRFAGPHAESAEKHEVPAKSDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTRLPALTVHVTQPKDGGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDPYQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEKCIWGPSYWCQNTETAAQCNAVEHCKRHVWIGCWGVGVGSCLWPTWAPTLLSTSGCQETASKASRT:ENST00000370038-ENST00000394940,ENST00000370038-ENST00000373120,ENST00000415641-ENST00000394940,ENST00000415641-ENST00000373120, 	13:ENST00000370038, 14:ENST00000415641, 	Intron:ENST00000373120,ENST00000394940,ENST00000357471, 	CDS:ENST00000370038,ENST00000415641, 	CDS:ENST00000373120,ENST00000394940,ENST00000357471, 	Domain=NBPF 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00647,Domain=NBPF 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00647,Domain=NBPF 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00647,:ENST00000415641, NO_DOMAIN:ENST00000370038, 	NO_DOMAIN:ENST00000370038,ENST00000415641, 	NO_DOMAIN:ENST00000373120,ENST00000394940,ENST00000357471, 	NO_DOMAIN:ENST00000373120,ENST00000394940,ENST00000357471, 
0.0002	4420	SRR064439	chimerascan	3	0	19	19	28283908	28284848	28221181	28237138	-	-	LOC148189	AK094188	28283908	28237138	uc002nrx.2|	uc002nrw.1|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4421	SRR064439	chimerascan	3	0	1	10	108992904	109010287	73576056	73580092	+	-	NBPF6	PSAP	109010287	73580092	uc009wep.2|uc009weq.2|	uc001jsl.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000370040,ENST00000412533,	ENST00000373120,ENST00000394929,ENST00000394940,ENST00000404083,ENST00000394934,ENST00000357471,ENST00000394936,	FrameShift 	1:ENST00000370040,ENST00000412533, 	654:ENST00000370040,ENST00000412533, 	-1:ENST00000373120,ENST00000394929,ENST00000394940,ENST00000404083,ENST00000394934,ENST00000357471,ENST00000394936, 	-1:ENST00000373120,ENST00000394929,ENST00000394940,ENST00000404083,ENST00000394934,ENST00000357471,ENST00000394936, 	MVVSADPLSSERAEMNILEINQELRSQLAESNQQFRDLKEKFLITQATAYSLANQLKKYKCEEYKDIIDSVLRDELQSMEKLAEKLRQAEELRQYKALVHSQAKELTQLREKLREGRDASRWLNKHLKTLLTPDDPDKSQGQDLREQLAEGHRLAEHLVHKLSPENDEDEDEDEDDKDEEVEKVQESPAPREVQKTEEKEVPQDSLEECAVTCSNSHNPSNSNQPHRSTKITFKEHEVDSALVVESEHPHDEEEEALNIPPENQNDHEEEEGKAPVPPRNRQSLEPGELTNLRDFLISPVVSHVANPGHHDKSNSYRHREVSFLALDEQKVCSAQDVARDYSNPKWDETSLGFLEKQSDLEEVKGQETVAPRLSRGPLRVDKHEIPQESLDGCCLTPSILPDLTPSYHPYWSTLYSFEDKQVSLALVDKIKKDQEEIEDQSPPCPRLSQELPEVKEQEVPEDSVNEVYLTPSVHHDVSDCHQPYSSTLSSLEDQLACSALDVASPTEAACPQGTWSGDLSHHRSEVQISQAQLEPSTLVPSCLRLQLDQGFHCGNGLAQRGLSSTTCSFSANADSGNQWPFQELVLEPSLGMKNPPQLEDDALEGSASNTQGRQVTGRIRASLVLILKTIRRRLPFSKWRLAFRFAGPHAESAEGSTRSQQSLMFTVRCVNSW*:ENST00000370040-ENST00000394940,ENST00000412533-ENST00000394934,ENST00000370040-ENST00000394936,ENST00000370040-ENST00000357471,ENST00000370040-ENST00000394929,ENST00000370040-ENST00000404083,ENST00000412533-ENST00000394936,ENST00000412533-ENST00000404083,ENST00000370040-ENST00000394934,ENST00000412533-ENST00000394940,ENST00000370040-ENST00000373120,ENST00000412533-ENST00000357471,ENST00000412533-ENST00000373120,ENST00000412533-ENST00000394929, 	Intron:ENST00000370040,ENST00000412533, 	Intron:ENST00000373120,ENST00000394929,ENST00000394940,ENST00000404083,ENST00000394934,ENST00000357471,ENST00000394936, 	CDS:ENST00000370040,ENST00000412533, 	CDS:ENST00000373120,ENST00000394929,ENST00000394940,ENST00000404083,ENST00000394934,ENST00000357471,ENST00000394936, 	Domain=NBPF 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00647,Domain=NBPF 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00647,Domain=NBPF 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00647,:ENST00000370040, NO_DOMAIN:ENST00000412533, 	NO_DOMAIN:ENST00000370040,ENST00000412533, 	NO_DOMAIN:ENST00000373120,ENST00000394929,ENST00000394940,ENST00000404083,ENST00000394934,ENST00000357471,ENST00000394936, 	Domain=Saposin A-type 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00414,Domain=Saposin B-type 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00415,Domain=Saposin B-type 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00415,Domain=Saposin B-type 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00415,Domain=Saposin B-type 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00415,Domain=Saposin A-type 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00414,:ENST00000394936, Domain=Saposin A-type;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS51110,Domain=Saposin B-type;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50015,Domain=Saposin B-type;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50015,Domain=Saposin B-type;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50015,Domain=Saposin B-type;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50015,Domain=Saposin A-type;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS51110,:ENST00000394934, NO_DOMAIN:ENST00000373120,ENST00000394929,ENST00000394940,ENST00000404083,ENST00000357471, 
0.0002	4422	SRR064439	chimerascan	3	0	M	M	10579	12138	8664	9990	+	+	STRF6	OK/SW-cl.16	12138	8664	uc004cov.3|	uc011mfi.1|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4423	SRR064439	chimerascan	3	0	19	M	10828755	10939944	1709	4262	+	+	DNM2	TVAS5	10939944	1709	uc002mpu.1|uc002mps.1|uc002mpt.1|uc002mpv.1|uc010dxl.1|	uc004cos.3|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000314646,	UnSpec,	UnSpec 	1:ENST00000314646, 	760:ENST00000314646, 	-1:UnSpec, 	-1:UnSpec, 	MGNRGMEELIPLVNKLQDAFSSIGQSCHLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQLIFSKTEHAEFLHCKSKKFTDFDEVRQEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIKDMILQFISRESSLILAVTPANMDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRSQKDIEGKKDIRAALAAERKFFLSHPAYRHMADRMGTPHLQKTLNQQLTNHIRESLPALRSKLQSQLLSLEKEVEEYKNFRPDDPTRKTKALLQMVQQFGVDFEKRIEGSGDQVDTLELSGGARINRIFHERFPFELVKMEFDEKDLRREISYAIKNIHGVRTGLFTPDMAFEAIVKKQIVKLKEPSLKCVDLVVSELATVIKKCAEKLSSYPRLREETERIVTTYIREREGRTKDQILLLIDIEQSYINTNHEDFIGFANAQQRSTQLNKKRAIPNQVIRRGWLTINNISLMKGGSKEYWFVLTAESLSWYKDEEEKEKKYMLPLDNLKIRDVEKGFMSNKHVFAIFNTEQRNVYKDLRQIELACDSQEDVDSWKASFLRAGVYPEKDQAENEDGAQENTFSMDPQLERQVETIRNLVDSYVAIINKSIRDLMPKTIMHLMINNTKAFIHHELLAYLYSSADQSSLMEESADQAQRRDDMLRMYHALKEALNIIGDISTSTVSTPVPPPVDDTWLQSASSHR:ENST00000314646-UnSpec, 	Intron:ENST00000314646, 	-1:UnSpec, 	CDS:ENST00000314646, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000314646, 	DOMAIN_UNK:ENST00000314646, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4424	SRR064439	chimerascan	3	0	9	1	134305477	134357195	160139463	160156766	+	+	BAT2L	ATP1A4	134357195	160139463	uc004can.3|	uc001fvg.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000357304,	ENST00000368081,	FrameShift 	1:ENST00000357304, 	1661:ENST00000357304, 	-1:ENST00000368081, 	-1:ENST00000368081, 	MSDRLGQITKGKDGKSKYSTLSLFDKYKGKSVDAIRSSVIPRHGLQSLGKVAAARRMPPPANLPSLKSENKGNDPNIVIVPKDGTGWANKQDQQDPKSSSATASQPPESLPQPGLQKSVSNLQKPTQSISQENTNSVPGGPKSWAQLNGKPVGHEGGLRGSSRLLSFSPEEFPTLKAAGGQDKAGKEKGVLDLSYGPGPSLRPQNVTSWREGGGRHIISATSLSTSPTELGSRNSSTGDGAPSSACTSDSKDPSLRPAQPVRKGASQFMGNVYHPPTYHDMLPAFMCSPKSSENQGTVERGSFPLPQLRLEPRVPFRQFQMNDQDGKENRLGLSRPLRPLRQLVERAPRPTIINAENLKGLDDLDADADDGWAGLHEEVDYSEKLKFSDDEEEEEVVKDGRPKWNSWDPRRQRQLSMSSADSADAKRTREEGKDWAEAVGASRVVRKAPDPQPPPRKLHGWAPGPDYQKSSMGSMFRQQSIEDKEDKPPPRQKFIQSEMSEAVERARKRREEEERRAREERLAACAAKLKQLDQKCKQARKAGEARKQAEKEVPWSPSAEKASPQENGPAVHKGSPEFPAQETPTTFPEEAPTVSPAVAQSNSSEEEAREAGSPAQEFKYQKSLPPRFQRQQQQQQQEQLYKMQHWQPVYPPPSHPQRTFYPHHPQMLGFDPRWMMMPSYMDPRITPTRTPVDFYPSALHPSGLMKPMMPQESLNGTGCRSEDQNCVPPLQERKVTPIDSPPVWSPEGYMALQSKGYPLPHPKSSDTLAMDMRVRNESSFSASLGRAGGVSAQRDLFEERGEEYLSAFDKKAQADFDSCISSQRIGQELLFPPQENVQDAGAPGGHTQNLRCSPLEPDFVPDEKKPECGSWDVSHQPETADTAHGVERETPREGTAFNISSWDKNGSPNKQPSSEPEWTPEPRSSSSQHPEQTGRTRRSGPIKKPVLKALKVEDKEKELEKIKQELGEESTRLAKEKEQSPTAEKDEDEENDASLANSSTTTLEDKGPGHATFGREATKFEEEEKPDKAWEARPPRESSDVPPMKRNNWIFIDEEQAFGVRGQARGRGRGFREFTFRGRPAGGNGSGLCGGGVLGARSIYCSSQRSGRGRGLREFARPEDCPRAKPRRRVASETHSEGSEYEELPKRRRQRGSENGNEGSLLEREESTLKKGDCRDSWRSNKGCSEDHSGLDAKSRGPRAFGRALPPRLSNCGYGRRTFVSKESPHWQSKSPGSSWQEYGPSDTCGSRRPTDRDYVPDSYRHPDAFGGRGFEDSRAEDKRSFFQDEHVADSENAENRPFRRRRPPRQDKPPRFRRLRQERESLGLWGPEEEPHLLAGQWPGRPKLCSGDKSGTVGRRSPELSYQNSSDHANEEWETASESSDFSERRERREGPGSEPDSQVDGGLSGASLGEKKELAKRSFSSQRPVVDRQSRKLEPGGFGEKPVRPGGGDTSPRYESQQNGTPLKVKRSPDEALPGGLSGCSSGSGHSPYALERAAHASADLPEASSKKAEKEAKLAAPRAGEQGEAMKQFDLNYGSAIIENCGSSPGEESEVGSMVGEGFIEVLTKKQRRLLEEERRKKEQAVQVPVKGRGLSSRIPPRFAKKQNNLCLEQGDVTVPGSSLGTEIWESSSQALPVQAPANDSWRKAVTAFSSTETGSAEAT*:ENST00000357304-ENST00000368081, 	Intron:ENST00000357304, 	Intron:ENST00000368081, 	CDS:ENST00000357304, 	CDS:ENST00000368081, 	NO_DOMAIN:ENST00000357304, 	NO_DOMAIN:ENST00000357304, 	NO_DOMAIN:ENST00000368081, 	Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Region=Interaction with phosphoinositide-3 kinase;Ontology_term=ECO:0000250;evidence=ECO:0000250,:ENST00000368081, 
0.0002	4425	SRR064439	chimerascan	3	0	17	22	48227404	48227877	29702997	29708774	-	+	PPP1R9B	GAS2L1	48227404	29702997	uc002iqh.3|	uc003afd.1|uc003afb.1|uc010gvm.1|uc003afc.1|uc003afa.1|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0004	4426	SRR064439	chimerascan	67	67	17	17	37006352	37010053	37070578	37078022	-	+	LOC222901	LASP1	37006352	37070578	uc002hqy.1|	uc010cvq.2|uc002hra.2|uc010wdz.1|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000318008,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000318008, 	-1:ENST00000318008, 	*:UnSpec-ENST00000318008, 	-1:UnSpec, 	5:ENST00000318008, 	Intergenic:UnSpec, 	CDS:ENST00000318008, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000318008, 	DOMAIN_UNK:ENST00000318008, 
0.0003	4427	SRR064439	chimerascan	2	2	20	20	3801188	3802940	3835205	3838615	+	+	C20orf29	MAVS,VISA,KIAA1271	3802940	3835205	uc002wju.1|uc002wjs.1|uc002wjt.2|	uc002wjy.3|uc002wjv.2|uc010zqn.1|uc002wjx.3|uc002wjw.3|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000246041,	ENST00000356687,	FrameShift 	1:ENST00000246041, 	59:ENST00000246041, 	-1:ENST00000356687, 	-1:ENST00000356687, 	MVHAFLIHTLRAPNTEDTGLCRVLYSCVFGAEKSPDDPRPHGAERDRLLRKEQILAVARLVSSQSIHPSWGQSPLSRI*:ENST00000246041-ENST00000356687, 	Intron:ENST00000246041, 	-1:ENST00000356687, 	CDS:ENST00000246041, 	5UTR:ENST00000356687, 	DOMAIN_UNK:ENST00000246041, 	DOMAIN_UNK:ENST00000246041, 	DOMAIN_UNK:ENST00000356687, 	DOMAIN_UNK:ENST00000356687, 
0.0002	4428	SRR064439	chimerascan	2	2	10	10	49207727	49207825	75404645	75414038	-	-	FAM25B	SYNPO2L	49207727	75414038	uc010qgj.1|	uc001jut.3|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000372872,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000372872, 	-1:ENST00000372872, 	DSKTEPGWQSRTPREGPALGNQWGLLHQPLPCQCHEPHRCLRKSACPHCAAVSRRGSCAISISP*:UnSpec-ENST00000372872, 	-1:UnSpec, 	Intron:ENST00000372872, 	Intergenic:UnSpec, 	CDS:ENST00000372872, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000372872, 	DOMAIN_UNK:ENST00000372872, 
0.0002	4429	SRR064439	chimerascan	2	2	10	10	47181590	47181688	75404645	75414038	-	-	FAM25B	SYNPO2L	47181590	75414038	uc010qfw.1|	uc001jut.3|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000340853,	ENST00000394810,ENST00000372872,	FrameShift 	1:ENST00000340853, 	24:ENST00000340853, 	-1:ENST00000394810,ENST00000372872, 	-1:ENST00000394810,ENST00000372872, 	MLGGLGKLAAEGLAHRTEKATEGADSKTEPGWQSRTPREGPALGNQWGLLHQPLPCQCHEPHRCLRKSACPHCAAVSRRGSCAISISP*:ENST00000340853-ENST00000394810,ENST00000340853-ENST00000372872, 	1:ENST00000340853, 	Intron:ENST00000394810,ENST00000372872, 	CDS:ENST00000340853, 	CDS:ENST00000394810,ENST00000372872, 	NO_DOMAIN:ENST00000340853, 	NO_DOMAIN:ENST00000340853, 	NO_DOMAIN:ENST00000394810,ENST00000372872, 	Domain=PDZ;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,:ENST00000394810, NO_DOMAIN:ENST00000372872, 
0.0002	4430	SRR064439	chimerascan	2	2	10	10	48247662	48247760	75404645	75414038	+	-	FAM25B	SYNPO2L	48247760	75414038	uc010qge.1|	uc001jut.3|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000372872,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000372872, 	-1:ENST00000372872, 	DSKTEPGWQSRTPREGPALGNQWGLLHQPLPCQCHEPHRCLRKSACPHCAAVSRRGSCAISISP*:UnSpec-ENST00000372872, 	-1:UnSpec, 	Intron:ENST00000372872, 	Intergenic:UnSpec, 	CDS:ENST00000372872, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000372872, 	DOMAIN_UNK:ENST00000372872, 
0.0004	4431	SRR064439	chimerascan	2	1	13	13	113556509	113556685	113669077	113752863	+	+	BC035340	MCF2L	113556685	113669077	uc001vso.2|	uc001vsu.2|uc001vsq.2|uc001vss.3|uc010tjr.1|uc001vsr.2|uc010tjs.1|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000375597,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000375597, 	-1:ENST00000375597, 	*:UnSpec-ENST00000375597, 	-1:UnSpec, 	2:ENST00000375597, 	Intergenic:UnSpec, 	CDS:ENST00000375597, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000375597, 	DOMAIN_UNK:ENST00000375597, 
0.0002	4432	SRR064439	chimerascan	2	1	16	16	81118068	81129980	81087103	81087699	-	-	GCSH	C16orf46	81118068	81087699	uc002fge.2|uc002fgd.2|	uc010chf.2|	breast_cancer	SRR064287,SRR064439,	breast_cancer,	NO_KINASE	ENST00000315467,	ENST00000378611,	FrameShift 	1:ENST00000315467, 	141:ENST00000315467, 	381:ENST00000378611, 	388:ENST00000378611, 	MALRVVRSVRALLCTLRAVPSPAAPCPPRPWQLGVGAVRTLRTGPALLSVRKFTEKHEWVTTENGIGTVGISNFAQEALGDVVYCSLPEVGTKLNKQDEFGALESVKAASELYSPLSGEVTEINEALAENPGLVNKSCYEDAQEKEDK:ENST00000315467-ENST00000378611, 	4:ENST00000315467, 	Intron:ENST00000378611, 	CDS:ENST00000315467, 	CDS:ENST00000378611, 	Domain=Lipoyl-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01066,:ENST00000315467, 	NO_DOMAIN:ENST00000315467, 	NO_DOMAIN:ENST00000378611, 	NO_DOMAIN:ENST00000378611, 
0.0002	4433	SRR064439	chimerascan	2	1	7	7	122377009	122526554	122341724	122342369	-	-	CADPS2	AK058116	122377009	122342369	uc010lkq.2|uc010lkp.2|	uc010lkr.1|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000313070,	UnSpec,	UnSpec 	1:ENST00000313070, 	132:ENST00000313070, 	-1:UnSpec, 	-1:UnSpec, 	MLDPSSSEEESDEGLEEESRDVLVAAGSSQRAPPAPTREGRRDAPGRAGGGGAARSLDDEQERRIRLQLYVFVVRCIAYPFNAKQPTDMARRQQKLNKQQLQLLKERFQAFLNGETQIVADEAFCNAVRSYY:ENST00000313070-UnSpec, 	3:ENST00000313070, 	-1:UnSpec, 	CDS:ENST00000313070, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000313070, 	DOMAIN_UNK:ENST00000313070, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4434	SRR064439	chimerascan	2	1	X	X	3817257	3820041	3735571	3736744	-	-	AK000470	LOC389906	3817257	3736744	uc004crn.2|	uc004crj.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4435	SRR064439	chimerascan	2	1	X	X	3778831	3781615	3735571	3736744	-	-	AK000470	LOC389906	3778831	3736744	uc004crl.2|	uc004crj.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0189	4436	SRR064439	chimerascan	2	1	10	10	71906289	71906432	71872030	71883853	-	-	TYSND1	AIFM2	71906289	71883853	uc001jqq.2|	uc001jqp.1|uc010qjg.1|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000287078,	ENST00000307864,	FrameShift 	1:ENST00000287078, 	17:ENST00000287078, 	-1:ENST00000307864, 	-1:ENST00000307864, 	MRRQWGSAMRAAEQAGCMCLI*:ENST00000287078-ENST00000307864, 	1:ENST00000287078, 	-1:ENST00000307864, 	CDS:ENST00000287078, 	5UTR:ENST00000307864, 	DOMAIN_UNK:ENST00000287078, 	DOMAIN_UNK:ENST00000287078, 	DOMAIN_UNK:ENST00000307864, 	DOMAIN_UNK:ENST00000307864, 
0.0001	4437	SRR064439	chimerascan	2	0	8	12	74659622	74659943	53290971	53291402	-	-	STAU2	KRT8	74659622	53291402	uc010lzk.2|uc010lzl.1|	uc009zmj.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000518981,ENST00000521727,	ENST00000293308,	FrameShift 	1:ENST00000518981,ENST00000521727, 	17:ENST00000518981,ENST00000521727, 	-1:ENST00000293308, 	-1:ENST00000293308, 	MVARPLHSTEGQPESLGKVV*:ENST00000518981-ENST00000293308,ENST00000521727-ENST00000293308, 	1:ENST00000518981,ENST00000521727, 	Intron:ENST00000293308, 	CDS:ENST00000518981,ENST00000521727, 	CDS:ENST00000293308, 	NO_DOMAIN:ENST00000518981,ENST00000521727, 	Domain=DRBM (double-stranded RNA-binding);Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50137,Domain=DRBM (double-stranded RNA-binding);Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50137,Domain=DRBM (double-stranded RNA-binding);Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50137,:ENST00000518981,ENST00000521727, 	NO_DOMAIN:ENST00000293308, 	Region=Head,Region=Rod,Region=Coil 1A,Region=Linker 1,Region=Coil 1B,Region=Linker 12,Region=Coil 2,Region=Necessary for interaction with PNN,Region=Tail,:ENST00000293308, 
0.0002	4438	SRR064439	chimerascan	2	0	22	M	42229106	42300978	1709	4262	+	+	SREBF2	TVAS5	42300978	1709	uc003bbi.2|uc003bbj.2|	uc004cos.3|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000361204,	UnSpec,	UnSpec 	1:ENST00000361204, 	1068:ENST00000361204, 	-1:UnSpec, 	-1:UnSpec, 	MDDSGELGGLETMETLTELGDELTLGDIDEMLQFVSNQVGEFPDLFSEQLCSSFPGSGGSGSSSGSSGSSSSSSNGRGSSSGAVDPSVQRSFTQVTLPSFSPSAASPQAPTLQVKVSPTSVPTTPRATPILQPRPQPQPQPQTQLQQQTVMITPTFSTTPQTRIIQQPLIYQNAATSFQVLQPQVQSLVTSSQVQPVTIQQQVQTVQAQRVLTQTANGTLQTLAPATVQTVAAPQVQQVPVLVQPQIIKTDSLVLTTLKTDGSPVMAAVQNPALTALTTPIQTAALQVPTLVGSSGTILTTMPVMMGQEKVPIKQVPGGVKQLEPPKEGERRTTHNIIEKRYRSSINDKIIELKDLVMGTDAKMHKSGVLRKAIDYIKYLQQVNHKLRQENMVLKLANQKNKLLKGIDLGSLVDNEVDLKIEDFNQNVLLMSPPASDSGSQAGFSPYSIDSEPGSPLLDDAKVKDEPDSPPVALGMVDRSRILLCVLTFLCLSFNPLTSLLQWGGAHDSDQHPHSGSGRSVLSFESGSGGWFDWMMPTLLLWLVNGVIVLSVFVKLLVHGEPVIRPHSRSSVTFWRHRKQADLDLARGDFAAAAGNLQTCLAVLGRALPTSRLDLACSLSWNVIRYSLQKLRLVRWLLKKVFQCRRATPATEAGFEDEAKTSARDAALAYHRLHQLHITGKLPAGSACSDVHMALCAVNLAECAEEKIPPSTLVEIHLTAAMGLKTRCGGKLGFLASYFLSRAQSLCGPEHSAVPDSLRWLCHPLGQKFFMERSWSVKSAAKESLYCAQRNPADPIAQVHQAFCKNLLERAIESLVKPQAKKKAGDQEEESCEFSSALEYLKLLHSFVDSVGVMSPPLSRSSVLKSALGPDIICRWWTSAITVAISWLQGDDAAVRSHFTKVERIPKALEVTESPLVKAIFHACRAMHASLPGKADGQQSSFCHCERASGHLWSSLNVSGATSDPALNHVVQLLTCDLLLSLRTALWQKQASASQAVGETYHASGAELAGFQRDLGSLRRLAHSFRPAYRKVFLHEATVRLMAGASPTRTHQLLEHSLRRRTTQSTKH:ENST00000361204-UnSpec, 	Intron:ENST00000361204, 	-1:UnSpec, 	CDS:ENST00000361204, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000361204, 	DOMAIN_UNK:ENST00000361204, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4439	SRR064439	chimerascan	2	0	6	6	5004050	5004193	5042740	5043171	+	+	AK094934	BC133670	5004193	5042740	uc003mwn.1|	uc011dhz.1|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4440	SRR064439	chimerascan	2	0	5	12	134734752	134734928	27933187	27955972	-	+	H2AFY	KIAA1340,KLHDC5	134734752	27933187	uc003lar.1|uc003lap.1|uc011cxz.1|uc003lao.1|uc003lam.1|uc003lan.1|uc003laq.1|	uc009zjj.2|uc001rij.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4441	SRR064439	chimerascan	2	0	M	8	237	368	101715144	101734315	-	-	DQ582201	PABPC1	237	101734315	uc004coq.3|	uc003yjs.1|uc003yjt.1|uc011lhd.1|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.9991	4442	SRR064439	chimerascan	2	0	17	17	58422842	58469586	37560543	37599881	-	-	USP32	MED1	58422842	37599881	uc002iyo.1|uc010wov.1|	uc002hrv.3|uc002hru.2|uc010wee.1|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000300896,ENST00000393003,	ENST00000300651,	InFrame 	1:ENST00000300896,ENST00000393003, 	61:ENST00000300896,ENST00000393003, 	44:ENST00000300651, 	1581:ENST00000300651, 	MGAKESRIGFLSYEEALRRVTDVELKRLKDAFKRTCGLSYYMGQHCFIREVLGDGVPPKVAEEKRVVMSSGGHQHLVSCLETLQKALKVTSLPAMTDRLESIARQNGLGSHLSASGTECYITSDMFYVEVQLDPAGQLCDVKVAHHGENPVSCPELVQQLREKNFDEFSKHLKGLVNLYNLPGDNKLKTKMYLALQSLEQDLSKMAIMYWKATNAGPLDKILHGSVGYLTPRSGGHLMNLKYYVSPSDLLDDKTASPIILHENNVSRSLGMNASVTIEGTSAVYKLPIAPLIMGSHPVDNKWTPSFSSITSANSVDLPACFFLKFPQPIPVSRAFVQKLQNCTGIPLFETQPTYAPLYELITQFELSKDPDPIPLNHNMRFYAALPGQQHCYFLNKDAPLPDGRSLQGTLVSKITFQHPGRVPLILNLIRHQVAYNTLIGSCVKRTILKEDSPGLLQFEVCPLSESRFSVSFQHPVNDSLVCVVMDVQDSTHVSCKLYKGLSDALICTDDFIAKVVQRCMSIPVTMRAIRRKAETIQADTPALSLIAETVEDMVKKNLPPASSPGYGMTTGNNPMSGTTTPTNTFPGGPITTLFNMSMSIKDRHESVGHGEDFSKVSQNPILTSLLQITGNGGSTIGSSPTPPHHTPPPVSSMAGNTKNHPMLMNLLKDNPAQDFSTLYGSSPLERQNSSSGSPRMEICSGSNKTKKKKSSRLPPEKPKHQTEDDFQRELFSMDVDSQNPIFDVNMTADTLDTPHITPAPSQCSTPPTTYPQPVPHPQPSIQRMVRLSSSDSIGPDVTDILSDIAEEASKLPSTSDDCPAIGTPLRDSSSSGHSQSTLFDSDVFQTNNNENPYTDPADLIADAAGSPSSDSPTNHFFHDGVDFNPDLLNSQSQSGFGEEYFDESSQSGDNDDFKGFASQALNTLGVPMLGGDNGETKFKGNNQADTVDFSIISVAGKALAPADLMEHHSGSQGPLLTTGDLGKEKTQKRVKEGNGTSNSTLSGPGLDSKPGKRSRTPSNDGKSKDKPPKRKKADTEGKSPSHSSSNRPFTPPTSTGGSKSPGSAGRSQTPPGVATPPIPKITIQIPKGTVMVGKPSSHSQYTSSGSVSSSGSKSHHSHSSSSSSSASTSGKMKSSKSEGSSSSKLSSSMYSSQGSSGSSQSKNSSQSGGKPGSSPITKHGLSSGSSSTKMKPQGKPSSLMNPSLSKPNISPSHSRPPGGSDKLASPMKPVPGTPPSSKAKSPISSGSGGSHMSGTSSSSGMKSSSGLGSSGSLSQKTPPSSNSCTASSSSFSSSGSSMSSSQNQHGSSKGKSPSRNKKPSLTAVIDKLKHGVVTSGPGGEDPLDGQMGVSTNSSSHPMSSKHNMSGGEFQGKREKSDKDKSKVSTSGSSVDSSKKTSESKNVGSTGVAKIIISKHDGGSPSIKAKVTLQKPGESSGEGLRPQMASSKNYGSPLISGSTPKHERGSPSHSKSPAYTPQNLDSESESGSSIAEKSYQNSPSSDDGIRPLPEYSTEKHKKHKKEKKKVKDKDRDRDRDKDRDKKKSHSIKPESWSKSPISSDQSLSMTSNTILSADRPSRLSPDFMIGEEDDDLMDVALIGN:ENST00000393003-ENST00000300651,ENST00000300896-ENST00000300651, 	2:ENST00000300896,ENST00000393003, 	Intron:ENST00000300651, 	CDS:ENST00000300896,ENST00000393003, 	CDS:ENST00000300651, 	NO_DOMAIN:ENST00000300896,ENST00000393003, 	Domain=EF-hand 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00448,Domain=EF-hand 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00448,Domain=EF-hand 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00448,Domain=DUSP;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00613,Domain=USP,:ENST00000300896,ENST00000393003, 	Region=Interaction with the Mediator complex and THRA,Region=Interaction with ESR1,Region=Interaction with the Mediator complex,Region=Interaction with the Mediator complex,Region=Interaction with THRA,Region=Interaction with VDR,Region=Interaction with PPARGC1A and THRA,Region=Interaction with ESR1,Region=Interaction with GATA1;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24245781;Dbxref=PMID:24245781,Region=Interaction with TP53,:ENST00000300651, 	NO_DOMAIN:ENST00000300651, 
0.0002	4443	SRR064439	chimerascan	2	0	X	M	73251431	73513409	1709	4262	-	+	AK311345	TVAS5	73251431	1709	uc010nlq.1|	uc004cos.3|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0000	4444	SRR064439	chimerascan	2	0	17	17	76164671	76167730	48445229	48447947	+	-	SYNGR2	MRPL27	76167730	48447947	uc002juu.1|	uc002iqr.2|uc002iqq.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000225777,	ENST00000225969,ENST00000442592,ENST00000503633,	FrameShift 	1:ENST00000225777, 	159:ENST00000225777, 	-1:ENST00000225969,ENST00000442592,ENST00000503633, 	-1:ENST00000225969,ENST00000442592,ENST00000503633, 	MESGAYGAAKAGGSFDLRRFLTQPQVVARAVCLVFALIVFSCIYGEGYSNAHESKQMYCVFNRNEDACRYGSAIGVLAFLASAFFLVVDAYFPQISNATDRKYLVIGDLLFSALWTFLWFVGFCFLTNQWAVTNPKDVLVGADSVRAAITFSFFSIFSWGYILAKPHSGYSSCCQIRIQEVGW*:ENST00000225777-ENST00000225969,ENST00000225777-ENST00000503633,ENST00000225777-ENST00000442592, 	Intron:ENST00000225777, 	Intron:ENST00000225969,ENST00000442592,ENST00000503633, 	CDS:ENST00000225777, 	CDS:ENST00000225969,ENST00000442592,ENST00000503633, 	Domain=MARVEL;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00581,:ENST00000225777, 	NO_DOMAIN:ENST00000225777, 	NO_DOMAIN:ENST00000225969,ENST00000442592,ENST00000503633, 	NO_DOMAIN:ENST00000225969,ENST00000442592,ENST00000503633, 
0.0002	4445	SRR064439	chimerascan	2	0	M	M	15999	16571	14762	15888	+	+	AF079515	cytochrome_b	16571	14762	uc004coz.1|	uc004coy.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4446	SRR064439	chimerascan	2	0	7	7	43921506	43945910	43906157	43908975	-	-	URG4	MRPS24	43921506	43908975	uc003tiv.2|uc011kbj.1|uc003tiw.2|uc003tiz.2|uc003tiy.2|	uc003tit.1|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000083014,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000083014, 	-1:ENST00000083014, 	GAVLEPRAALRLACTPPRSAPRTGRPEYA*:UnSpec-ENST00000083014, 	-1:UnSpec, 	Intron:ENST00000083014, 	Intergenic:UnSpec, 	CDS:ENST00000083014, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000083014, 	DOMAIN_UNK:ENST00000083014, 
0.0002	4447	SRR064439	chimerascan	2	0	1	10	243245192	243265046	38717074	38741080	-	+	AL137733	LOC399744	243245192	38717074	uc001hzq.1|	uc009xme.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4448	SRR064439	chimerascan	2	0	1	1	147931724	147931980	145004781	145005286	-	+	FLJ39739	BC065231	147931724	145004781	uc009wjx.1|uc009wjz.1|uc009wjy.1|uc001eql.2|	uc001emi.3|	breast_cancer	SRR064286,SRR064437,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE																
0.0189	4449	SRR064439	chimerascan	2	0	2	1	242169248	242212301	36549945	36553875	-	+	HDLBP	TEKT2	242169248	36549945	uc002wbb.2|uc002waz.2|uc002wba.2|	uc001bzs.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000310931,	ENST00000207457,	FrameShift 	1:ENST00000310931, 	1239:ENST00000310931, 	-1:ENST00000207457, 	-1:ENST00000207457, 	MSSVAVLTQESFAEHRSGLVPQQIKVATLNSEEESDPPTYKDAFPPLPEKAACLESAQEPSGAWGNKIRPIKASVITQVFHVPLEERKYKDMNQFGEGEQAKICLEIMQRTGAHLELSLAKDQGLSIMVSGKLDAVMKARKDIVARLQTQASATVAIPKEHHRFVIGKNGEKLQDLELKTATKIQIPRPDDPSNQIKITGTKEGIEKARHEVLLISAEQDKRAVERLEVEKAFHPFIAGPYNRLVGEIMQETGTRINIPPPSVNRTEIVFTGEKEQLAQAVARIKKIYEEKKKKTTTIAVEVKKSQHKYVIGPKGNSLQEILERTGVSVEIPPSDSISETVILRGEPEKLGQALTEVYAKANSFTVSSVAAPSWLHRFIIGKKGQNLAKITQQMPKVHIEFTEGEDKITLEGPTEDVNVAQEQIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSEKSNLIRIEGDPQGVQQAKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKSDIVQLRGPKNEVEKCTKYMQKMVADLVENSYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENSNSETIIITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLLHLAEEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGARVIFPAAEDKDQDLITIIGKEDAVREAQKELEALIQNLDNVVEDSMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFPRSGTQSDKVTLKGAKDCVEAAKKRIQEIIEDLEAQVTLECAIPQKFHRSVMGPKGSRIQQITRDFSVQIKFPDREENAVHSTEPVVQENGDEAGEGREAKDCDPGSPRRCDIIIISGRKEKCEAAKEALEALVPVTIEVEVPFDLHRYVIGQKGSGIRKMMDEFEVNIHVPAPELQSDIIAITGLAANLDRAKAGLLERVKELQAEQEDRALRSFKLSVTVDPKYHPKIIGRKGAVITQIRLEHDVNIQFPDKDDGNQPQDQITITGYEKNTEAARDAILRIVGELEQMVSEDVPLDHRVHARIIGARGKAIRKIMDEFKVDIRFPQSGAPDPNCVTVTGLPENVEEAIDHILNLEEEYLADVVDSEALQVYMKPPAHEEAKAPSRGFVVRDAPWTASSSEKAWRLPDGEGAAPGAAPQLPSANRHASLETEQGSCP*:ENST00000310931-ENST00000207457, 	27:ENST00000310931, 	-1:ENST00000207457, 	CDS:ENST00000310931, 	5UTR:ENST00000207457, 	DOMAIN_UNK:ENST00000310931, 	DOMAIN_UNK:ENST00000310931, 	DOMAIN_UNK:ENST00000207457, 	DOMAIN_UNK:ENST00000207457, 
0.0002	4450	SRR064439	chimerascan	2	0	1	1	144340526	144340773	145004781	145005286	-	+	LOC728855	BC065231	144340526	145004781	uc001ekr.3|uc001ekt.3|	uc001emi.3|	breast_cancer	SRR064286,SRR064437,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	4451	SRR064439	chimerascan	2	0	1	1	143744201	143744587	145004781	145005286	-	+	FLJ39739	BC065231	143744201	145004781	uc009whx.2|uc001ejr.3|uc001ejp.3|uc009why.2|	uc001emi.3|	breast_cancer	SRR064286,SRR064437,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	4452	SRR064439	chimerascan	2	0	1	17	233431072	233431459	39679870	39681525	-	-	PCNXL2	JUP	233431072	39681525	uc001hvl.2|	uc010wfs.1|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000258229,	UnSpec,	UnSpec 	1:ENST00000258229, 	50:ENST00000258229, 	-1:UnSpec, 	-1:UnSpec, 	MVSQVLQLLRQGVWAALTGGWYHDPEQSKFTNSCHLYLWLFLLLLPLALH:ENST00000258229-UnSpec, 	1:ENST00000258229, 	-1:UnSpec, 	CDS:ENST00000258229, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000258229, 	DOMAIN_UNK:ENST00000258229, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4453	SRR064439	chimerascan	2	0	M	M	7587	8295	237	368	+	-	X64709	DQ582201	8295	368	uc004cou.3|	uc004coq.3|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4454	SRR064439	chimerascan	2	0	1	1	144520774	144520993	145004781	145005286	-	+	LOC728875,BC021732	BC065231	144520774	145004781	uc001eky.3|uc001ela.3|	uc001emi.3|	breast_cancer	SRR064438,SRR064439,SRR064440,	breast_cancer,	NO_KINASE																
0.0002	4455	SRR064439	chimerascan	2	0	13	16	31480312	31491649	31200444	31203097	+	+	C13orf33	FUS/CHOP	31491649	31200444	uc001uth.3|	uc002ebg.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000380482,	UnSpec,	UnSpec 	1:ENST00000380482, 	129:ENST00000380482, 	-1:UnSpec, 	-1:UnSpec, 	MAGAACEPVARPSLTSISSGELRSLWTCDCELALLPLAQLLRLQPGAFQLSGDQLVVARPGEPAAARGGFNVFGDGLVRLDGQLYRLSSYIKRYVELTNYCDYKDYRETILSKPMLFFINVQTKKDTSK:ENST00000380482-UnSpec, 	Intron:ENST00000380482, 	-1:UnSpec, 	CDS:ENST00000380482, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000380482, 	DOMAIN_UNK:ENST00000380482, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4456	SRR064439	chimerascan	2	0	5	M	134262222	134262248	14762	15888	-	+	DQ584699	cytochrome_b	134262222	14762	uc011cxx.1|	uc004coy.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0189	4457	SRR064439	chimerascan	2	0	11	9	65686381	65686531	34179011	34252520	-	+	C11orf68	UBAP1	65686381	34179011	uc009yqv.2|uc001ogi.2|	uc010mka.1|uc011loi.1|uc003zty.2|uc003ztx.2|uc011loj.1|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000438576,	ENST00000297661,	FrameShift 	1:ENST00000438576, 	40:ENST00000438576, 	-1:ENST00000297661, 	-1:ENST00000297661, 	MAAAAAAAVAGVGRGGGGAEPRQERSRARGWAGVERSEGRK*:ENST00000438576-ENST00000297661, 	1:ENST00000438576, 	-1:ENST00000297661, 	CDS:ENST00000438576, 	5UTR:ENST00000297661, 	DOMAIN_UNK:ENST00000438576, 	DOMAIN_UNK:ENST00000438576, 	DOMAIN_UNK:ENST00000297661, 	DOMAIN_UNK:ENST00000297661, 
0.0002	4458	SRR064439	chimerascan	2	0	4	M	185724474	185733413	1709	4262	-	+	ACSL1	TVAS5	185724474	1709	uc003iwv.1|uc011ckn.1|uc003iww.2|uc011ckm.1|uc003iwt.1|uc003iwu.1|	uc004cos.3|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000281455,	UnSpec,	UnSpec 	1:ENST00000281455, 	64:ENST00000281455, 	-1:UnSpec, 	-1:UnSpec, 	MQAHELFRYFRMPELVDFRQYVRTLPTNTLMGFGAFAALTTFWYATRPKPLKPPCDLSMQSVEV:ENST00000281455-UnSpec, 	2:ENST00000281455, 	-1:UnSpec, 	CDS:ENST00000281455, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000281455, 	DOMAIN_UNK:ENST00000281455, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4459	SRR064439	chimerascan	2	0	M	M	5855	7427	12338	14645	+	+	BC018860	MTND5	7427	12338	uc011mfh.1|	uc004cox.3|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4460	SRR064439	chimerascan	2	0	11	M	73687686	73693889	14762	15888	-	+	UCP2	cytochrome_b	73687686	14762	uc001ouq.1|	uc004coy.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000310473,	UnSpec,	UnSpec 	1:ENST00000310473, 	211:ENST00000310473, 	-1:UnSpec, 	-1:UnSpec, 	MVGFKATDVPPTATVKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGPVRATASAQYRGVMGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHASIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVNAYKTIAREEGFRGLWKGTSPNVARNAIVNCAELVTYDLIKDALLKANLMT:ENST00000310473-UnSpec, 	6:ENST00000310473, 	-1:UnSpec, 	CDS:ENST00000310473, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000310473, 	DOMAIN_UNK:ENST00000310473, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4461	SRR064439	chimerascan	2	0	20	M	60878027	60882884	14762	15888	+	+	ADRM1	cytochrome_b	60882884	14762	uc002ycn.2|uc002yco.2|	uc004coy.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000253003,	UnSpec,	UnSpec 	1:ENST00000253003, 	285:ENST00000253003, 	-1:UnSpec, 	-1:UnSpec, 	MTTSGALFPSLVPGSRGASNKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDDCEFKRVPQCPSGRVYVLKFKAGSKRLFFWMQEPKTDQDEEHCRKVNEYLNNPPMPGALGASGSSGHELSALGGEGGLQSLLGNMSHSQLMQLIGPAGLGGLGGLGALTGPGLASLLGSSGPPGSSSSSSSRSQSAAVTPSSTTSSTRATPAPSAPAAASATSPSPAPSSGNGASTAASPTQPIQLSDLQSILATMNVPAGPAGGQQ:ENST00000253003-UnSpec, 	Intron:ENST00000253003, 	-1:UnSpec, 	CDS:ENST00000253003, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000253003, 	DOMAIN_UNK:ENST00000253003, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0004	4462	SRR064439	chimerascan	2	0	6	17	139456249	139456804	76166898	76168800	+	+	HECA	SYNGR2	139456804	76166898	uc003qin.2|	uc002juu.1|uc002jut.2|uc002juv.1|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000367658,	ENST00000225777,	FrameShift 	1:ENST00000367658, 	90:ENST00000367658, 	-1:ENST00000225777, 	-1:ENST00000225777, 	MPNPKNSKGGRKNKRANSSGDEQENGAGALAAAGAAGAAAGGALAAAAGCGAAAAGAPGAGGAAGAGGAGTGAANAAAAAGAAAAGDAKNGLRLDRVLLHLW*:ENST00000367658-ENST00000225777, 	Intron:ENST00000367658, 	2:ENST00000225777, 	CDS:ENST00000367658, 	CDS:ENST00000225777, 	NO_DOMAIN:ENST00000367658, 	NO_DOMAIN:ENST00000367658, 	NO_DOMAIN:ENST00000225777, 	Domain=MARVEL;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00581,:ENST00000225777, 
0.0001	4463	SRR064439	chimerascan	2	0	17	M	48450590	48458818	7587	8295	+	+	EME1	X64709	48458818	7587	uc002iqs.1|uc010dbq.1|uc010dbp.1|	uc004cou.3|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000511648,	UnSpec,	UnSpec 	0:ENST00000511648, 	0:ENST00000511648, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000511648-UnSpec, 	Intron:ENST00000511648, 	Intron:UnSpec, 	3UTR:ENST00000511648, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000511648, 	DOMAIN_UNK:ENST00000511648, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0003	4464	SRR064439	chimerascan	2	0	14	M	99947739	99973484	1709	4262	+	+	CCNK	TVAS5	99973484	1709	uc001ygi.3|	uc004cos.3|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000216279,	UnSpec,	FrameShift 	1:ENST00000216279, 	1727:ENST00000216279, 	-1:UnSpec, 	-1:UnSpec, 	MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDRTSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQPKKPSPQPSSPRQVKRAVVSGLKQALGRAGFPGGGNT*:ENST00000216279-UnSpec, 	Intron:ENST00000216279, 	-1:UnSpec, 	CDS:ENST00000216279, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000216279, 	DOMAIN_UNK:ENST00000216279, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4465	SRR064439	chimerascan	2	0	3	7	128968453	128991258	130146080	130295824	+	-	COPG	COPG2	128991258	130295824	uc010htb.2|uc003els.2|	uc003vqh.1|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0004	4466	SRR064439	chimerascan	2	0	17	17	36932850	36943173	56801401	56811690	-	+	PIP4K2B	RAD51C	36932850	56801401	uc010wdu.1|	uc002iwv.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000337432,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000337432, 	-1:ENST00000337432, 	GKLGTCCYNTANLSLGPKAKVGNIVQVTQPEGMHSTVSNQTSGI*:UnSpec-ENST00000337432, 	-1:UnSpec, 	7:ENST00000337432, 	Intergenic:UnSpec, 	CDS:ENST00000337432, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000337432, 	DOMAIN_UNK:ENST00000337432, 
0.0002	4467	SRR064439	chimerascan	2	0	13	M	98794816	99047730	1709	4262	+	+	FARP1	TVAS5	99047730	1709	uc001vnh.2|uc001vnj.2|	uc004cos.3|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000319562,	UnSpec,	UnSpec 	1:ENST00000319562, 	471:ENST00000319562, 	-1:UnSpec, 	-1:UnSpec, 	MGEIEQRPTPGSRLGAPENSGISTLERGQKPPPTPSGKLVSIKIQMLDDTQEAFEVPQRAPGKVLLDAVCNHLNLVEGDYFGLEFPDHKKITVWLDLLKPIVKQIRRPKHVVVKFVVKFFPPDHTQLQEELTRYLFALQVKQDLAQGRLTCNDTSAALLISHIVQSEIGDFDEALDREHLAKNKYIPQQDALEDKIVEFHHNHIGQTPAESDFQLLEIARRLEMYGIRLHPAKDREGTKINLAVANTGILVFQGFTKINAFNWAKVRKLSFKRKRFLIKLRPDANSAYQDTLEFLMASRDFCKSFWKICVEHHAFFRLFEEPKPKPKPVLFSRGSSFRFSGRTQKQVLDYVKEGGHKKVQFERKHSKIHSIRSLASQPTELNSEVLEQSQQSTSLTFGEGAESPGGQSCRRGKEPKVSAGEPGSHPSPAPRRSPAGNKQADGAASAPTEEEEEVVKDRTQQSKPQPPQPST:ENST00000319562-UnSpec, 	Intron:ENST00000319562, 	-1:UnSpec, 	CDS:ENST00000319562, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000319562, 	DOMAIN_UNK:ENST00000319562, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4468	SRR064439	chimerascan	2	0	11	M	10822509	10829631	1709	4262	-	+	EIF4G2	TVAS5	10822509	1709	uc001mjf.1|	uc004cos.3|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000429377,	UnSpec,	UnSpec 	1:ENST00000429377, 	585:ENST00000429377, 	-1:UnSpec, 	-1:UnSpec, 	MAGWPTPAGTRPWRTEARLCSDGEGAWLGPLAPWREARLASRRGGISFLLSPPLPTPSINIILLKILRCQAAKVESAIAEGGASRFSASSGGGGSRGAPQHYPKTAGNSEFLGKTPGQNAQKWIPARSTRRDDNSAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILLIVDKALEEPKYSSLYAQLCLRLAEDAPNFDGPAAEGQPGQKQSTTFRRLLISKLQDEFENRTRNVDVYDKRENPLLPEEEEQRAIAKIKMLGNIKFIGELGKLDLIHESILHKCIKTLLEKKKRVQLKDMGEDLECLCQIMRTVGPRLDHERAKSLMDQYFARMCSLMLSKELPARIRFLLQDTVELREHHWVPRKAFLDNGPKTINQIRQDAVKDLGVFIPAPMAQGMRSDFFLEGPFMPPRMKMDRDPLGGLADMFGQMPGSGIGTGPGVIQDRFSPTMGRHRSNQLFNGHGGHIMPPTQSQFGEMGGKFMKSQGLSQLYHNQSQGLLSQLQGQSKDMPPRFSKKGQLNADEISLRPAQSFLMNKNQVPKLQPQITMIPPSAQPPRTQTPPLG:ENST00000429377-UnSpec, 	16:ENST00000429377, 	-1:UnSpec, 	CDS:ENST00000429377, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000429377, 	DOMAIN_UNK:ENST00000429377, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4469	SRR064439	chimerascan	2	0	19	19	15443101	15443342	14072343	14104707	-	-	BRD4	RFX1	15443101	14104707	uc002nat.3|uc002nau.3|	uc002mxv.2|uc010dzi.2|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4470	SRR064439	chimerascan	2	0	19	M	10254442	10255430	1709	4262	-	+	DNMT1	TVAS5	10254442	1709	uc002mnh.2|uc010xlc.1|uc002mnf.2|uc002mng.2|uc010xld.1|	uc004cos.3|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000340748,	UnSpec,	UnSpec 	1:ENST00000340748, 	1022:ENST00000340748, 	-1:UnSpec, 	-1:UnSpec, 	MPARTAPARVPTLAVPAISLPDDVRRRLKDLERDSLTEKECVKEKLNLLHEFLQTEIKNQLCDLETKLRKEELSEEGYLAKVKSLLNKDLSLENGAHAYNREVNGRLENGNQARSEARRVGMADANSPPKPLSKPRTPRRSKSDGEAKPEPSPSPRITRKSTRQTTITSHFAKGPAKRKPQEESERAKSDESIKEEDKDQDEKRRRVTSRERVARPLPAEEPERAKSGTRTEKEEERDEKEEKRLRSQTKEPTPKQKLKEEPDREARAGVQADEDEDGDEKDEKKHRSQPKDLAAKRRPEEKEPEKVNPQISDEKDEDEKEEKRRKTTPKEPTEKKMARAKTVMNSKTHPPKCIQCGQYLDDPDLKYGQHPPDAVDEPQMLTNEKLSIFDANESGFESYEALPQHKLTCFSVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDDDPSLEGGVNGKNLGPINEWWITGFDGGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEKIYISKIVVEFLQSNSDSTYEDLINKIETTVPPSGLNLNRFTEDSLLRHAQFVVEQVESYDEAGDSDEQPIFLTPCMRDLIKLAGVTLGQRRAQARRQTIRHSTREKDRGPTKATTTKLVYQIFDTFFAEQIEKDDREDKENAFKRRRCGVCEVCQQPECGKCKACKDMVKFGGSGRSKQACQERRCPNMAMKEADDDEEVDDNIPEMPSPKKMHQGKKKKQNKNRISWVGEAVKTDGKKSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDTVLGATSDPLELFLVDECEDMQLSYIHSKVKVIYKAPSENWAMEGGMDPESLLEGDDGKTYFYQLWYDQDYARFESPPKTQPTEDNKFKFCVSCARLAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGILYRVGDGVYLPPEAFTFNIKLSSPVKRPRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKEIFCPKKSNGRPNETDIKIRVNKFY:ENST00000340748-UnSpec, 	28:ENST00000340748, 	-1:UnSpec, 	CDS:ENST00000340748, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000340748, 	DOMAIN_UNK:ENST00000340748, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0306	4471	SRR064439	chimerascan	2	0	19	M	2050800	2051243	7587	8295	-	+	MKNK2,DKFZp586A1021	X64709	2050800	7587	uc010xgv.1|uc002lur.2|uc002lus.2|	uc004cou.3|	breast_cancer	SRR064439,	breast_cancer,	5p_KINASE	ENST00000250896,	UnSpec,	UnSpec 	1:ENST00000250896, 	16:ENST00000250896, 	-1:UnSpec, 	-1:UnSpec, 	MVQKKPAELQGFHRSF:ENST00000250896-UnSpec, 	2:ENST00000250896, 	-1:UnSpec, 	CDS:ENST00000250896, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000250896, 	DOMAIN_UNK:ENST00000250896, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4472	SRR064439	chimerascan	2	0	20	M	62121832	62130505	14762	15888	-	+	EEF1A2	cytochrome_b	62121832	14762	uc010gkg.1|	uc004coy.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000217182,	UnSpec,	UnSpec 	1:ENST00000217182, 	342:ENST00000217182, 	-1:UnSpec, 	-1:UnSpec, 	MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKLKAERERGITIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPAYSEKRYDEIVKEVSAYIKKIGYNPATVPFVPISGWHGDNMLEPSPNMPWFKGWKVERKEGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTS:ENST00000217182-UnSpec, 	6:ENST00000217182, 	-1:UnSpec, 	CDS:ENST00000217182, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000217182, 	DOMAIN_UNK:ENST00000217182, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4473	SRR064439	chimerascan	2	0	M	M	237	368	12338	14645	-	+	DQ582201	MTND5	237	12338	uc004coq.3|	uc004cox.3|	breast_cancer	SRR064287,SRR064439,	breast_cancer,	NO_KINASE																
0.0001	4474	SRR064439	chimerascan	2	0	12	12	123180871	123215390	123185840	123187904	-	-	GPR81	NIACR1	123180871	123187904	uc001ucw.1|	uc001ucx.1|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000356987,	UnSpec,	UnSpec 	0:ENST00000356987, 	0:ENST00000356987, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000356987-UnSpec, 	Intron:ENST00000356987, 	Intron:UnSpec, 	3UTR:ENST00000356987, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000356987, 	DOMAIN_UNK:ENST00000356987, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.9961	4475	SRR064439	chimerascan	2	0	17	17	37595418	37607527	48548389	48552200	-	+	MED1	UNQ493,ACSF2	37595418	48548389	uc002hru.2|uc002hrv.3|	uc010wmm.1|uc002iqu.2|uc010wml.1|uc010wmn.1|uc010dbt.1|uc010wmo.1|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000300651,ENST00000394287,	ENST00000427954,ENST00000300441,	InFrame 	1:ENST00000300651,ENST00000394287, 	142:ENST00000300651,ENST00000394287, 	431:ENST00000427954, 406:ENST00000300441, 	640:ENST00000427954, 615:ENST00000300441, 	MKAQGETEESEKLSKMSSLLERLHAKFNQNRPWSETIKLVRQVMEKRVVMSSGGHQHLVSCLETLQKALKVTSLPAMTDRLESIARQNGLGSHLSASGTECYITSDMFYVEVQLDPAGQLCDVKVAHHGENPVSCPELVQQLIAYGTTENSPVTFAHFPEDTVEQKAESVGRIMPHTEARIMNMEAGTLAKLNTPGELCIRGYCVMLGYWGEPQKTEEAVDQDKWYWTGDVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEICACIRLKDGEETTVEEIKAFCKGKISHFKIPKYIVFVTNYPLTISGKIQKFKLREQMERHLNL:ENST00000300651-ENST00000427954,ENST00000300651-ENST00000300441,ENST00000394287-ENST00000427954, 	6:ENST00000300651,ENST00000394287, 	11:ENST00000300441, 12:ENST00000427954, 	CDS:ENST00000300651,ENST00000394287, 	CDS:ENST00000427954,ENST00000300441, 	Region=Interaction with the Mediator complex and THRA,Region=Interaction with ESR1,Region=Interaction with the Mediator complex,:ENST00000300651,ENST00000394287, 	Region=Interaction with THRA,Region=Interaction with VDR,Region=Interaction with PPARGC1A and THRA,Region=Interaction with GATA1;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24245781;Dbxref=PMID:24245781,Region=Interaction with TP53,:ENST00000300651,ENST00000394287, 	NO_DOMAIN:ENST00000427954,ENST00000300441, 	NO_DOMAIN:ENST00000427954,ENST00000300441, 
0.0002	4476	SRR064439	chimerascan	2	0	1	9	1072397	1079432	139270030	139290222	+	-	BC028014	SNAPC4	1079432	139290222	uc001acv.2|	uc004chh.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000298532,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000298532, 	-1:ENST00000298532, 	GRRKVGRSQQ*:UnSpec-ENST00000298532, 	-1:UnSpec, 	Intron:ENST00000298532, 	Intergenic:UnSpec, 	CDS:ENST00000298532, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000298532, 	DOMAIN_UNK:ENST00000298532, 
0.0003	4477	SRR064439	chimerascan	2	0	17	17	37856254	37856564	61509666	61515531	+	-	ERBB2	CYB561	37856564	61515531	uc010wek.1|	uc002jaq.2|	breast_cancer	SRR064287,SRR064438,SRR064439,SRR064440,	breast_cancer,	5p_KINASE	ENST00000269571,	ENST00000360793,	FrameShift 	1:ENST00000269571, 	24:ENST00000269571, 	-1:ENST00000360793, 	-1:ENST00000360793, 	MELAALCRWGLLLALLPPGAASTQGLSLHPHRIWNSWRRVPGHACPRGEAGPLPPATPET*:ENST00000269571-ENST00000360793, 	Intron:ENST00000269571, 	-1:ENST00000360793, 	CDS:ENST00000269571, 	5UTR:ENST00000360793, 	DOMAIN_UNK:ENST00000269571, 	DOMAIN_UNK:ENST00000269571, 	DOMAIN_UNK:ENST00000360793, 	DOMAIN_UNK:ENST00000360793, 
0.0002	4478	SRR064439	chimerascan	2	0	12	16	58005218	58005774	2012062	2014629	+	-	GEFT	OK/KNS-cl.6	58005774	2014629	uc001spa.2|uc001spb.2|	uc002cnl.2|uc010bsa.1|uc002cnm.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4479	SRR064439	chimerascan	2	0	17	M	37894187	37899554	1709	4262	+	+	GRB7	TVAS5	37899554	1709	uc010cwc.2|uc002hsr.2|uc002hss.2|uc002hst.2|	uc004cos.3|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000309156,	UnSpec,	UnSpec 	1:ENST00000309156, 	195:ENST00000309156, 	-1:UnSpec, 	-1:UnSpec, 	MELDLSPPHLSSSPEDLCPAPGTPPGTPRPPDTPLPEEVKRSQPLLIPTTGRKLREEERRATSLPSIPNPFPELCSPPSQSPILGGPSSARGLLPRDASRPHVVKVYSEDGACRSVEVAAGATARHVCEMLVQRAHALSDETWGLVECHPHLALERGLEDHESVVEVQAAWPVGGDSRFVFRKNFAKYELFKSSP:ENST00000309156-UnSpec, 	Intron:ENST00000309156, 	-1:UnSpec, 	CDS:ENST00000309156, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000309156, 	DOMAIN_UNK:ENST00000309156, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4480	SRR064439	chimerascan	2	0	X	X	49126317	49138526	49218320	49223952	+	+	PPP1R3F	GAGE1,GAGE2A	49138526	49218320	uc004dnh.1|uc004dni.2|uc004dnj.1|uc011mnd.1|	uc011mnr.1|uc011mnp.1|uc011mns.1|uc011mno.1|uc011mnq.1|uc010njd.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000055335,	UnSpec,	UnSpec 	1:ENST00000055335, 	381:ENST00000055335, 	-1:UnSpec, 	-1:UnSpec, 	MARTAPVEPPLRHSAPPSPAAGEPRTSVEAAVAPRRVLFADEALGLPLAQLRRYRPWGGPGAGKMAAAAGQDGGGGGGADEDDDGEDGDEGEEEEEACPEPSPLCPVPAGGGFYLVPTFSLPPAPGRLERLGRVMVELEALLPPPGAVPGGAGVWVPGGRPPVLRGLVRVLNRSFEKAVHVRASHDGWASFCDHPARYVPRSPPWAGAGGTGAGDPILDPGLGLGPGQASASSPDDGGRTDRFAFQLPFAEGAGDGARLDFVVRYETPEGTFWANNHGRNYTVLLRIAPAPTPTDAEGLPQQQQLPQLEPQPECQGPVEAEARQLKSCMKPVRRRPAEEELKTKNMDDNTFAMAEHPDVQESVGPLVAPTPLRPWPQMTLQ:ENST00000055335-UnSpec, 	Intron:ENST00000055335, 	-1:UnSpec, 	CDS:ENST00000055335, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000055335, 	DOMAIN_UNK:ENST00000055335, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4481	SRR064439	chimerascan	2	0	8	M	68497705	68497734	14762	15888	-	+	DQ584699	cytochrome_b	68497705	14762	uc011ley.1|	uc004coy.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4482	SRR064439	chimerascan	2	0	16	M	56965748	56976149	1709	4262	+	+	HERPUD1	TVAS5	56976149	1709	uc010ccp.1|	uc004cos.3|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000300302,	UnSpec,	UnSpec 	1:ENST00000300302, 	337:ENST00000300302, 	-1:UnSpec, 	-1:UnSpec, 	MESETEPEPVTLLVKSPNQRHRDLELSGDRGWSVGHLKAHLSRVYPERPRPEDQRLIYSGKLLLDHQCLRDLLPKQEKRHVLHLVCNVKSPSKMPEINAKVAESTEEPAGSNRGQYPEDSSSDGLRQREVLRNLSSPGWENISRPEAAQQAFQGLGPGFSGYTPYGWLQLSWFQQIYARQYYMQYLAATAASGAFVPPPSAQEIPVVSAPAPAPIHNQFPAENQPANQNAAPQVVVNPGANQNLRMNAQGGPIVEEDDEINRDWLDWTYSAATFSVFLSILYFYSSLSRFLMVMGATVVMYLHHVGWFPFRPRPVQNFPNDGPPPDVVNQDPNNNLQ:ENST00000300302-UnSpec, 	Intron:ENST00000300302, 	-1:UnSpec, 	CDS:ENST00000300302, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000300302, 	DOMAIN_UNK:ENST00000300302, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0105	4483	SRR064439	chimerascan	2	0	8	3	145625382	145628620	184025145	184026840	-	+	CPSF1	PSMD2	145625382	184025145	uc003zck.1|	uc011brk.1|uc003fnn.1|uc011brj.1|	breast_cancer	SRR064439,SRR064441,	breast_cancer,	NO_KINASE	ENST00000349769,	ENST00000310118,	InFrame 	1:ENST00000349769, 	343:ENST00000349769, 	679:ENST00000310118, 	908:ENST00000310118, 	MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGKAHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTTGTTAFPLRTQEGVRITLDCAQATFISYDKMVISLKGGEMRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVILRKNPNYDL:ENST00000349769-ENST00000310118, 	10:ENST00000349769, 	17:ENST00000310118, 	CDS:ENST00000349769, 	CDS:ENST00000310118, 	NO_DOMAIN:ENST00000349769, 	NO_DOMAIN:ENST00000349769, 	Repeat=PC 6,Repeat=PC 7,:ENST00000310118, 	Repeat=PC 1,Repeat=PC 2,Repeat=PC 3,Repeat=PC 4,Repeat=PC 5,:ENST00000310118, 
0.0002	4484	SRR064439	chimerascan	2	0	7	1	45808259	45808617	224189609	224197818	-	+	SEPT13	AK124970	45808259	224189609	uc003tnf.3|uc003tnh.2|	uc001hog.1|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.3124	4485	SRR064439	chimerascan	2	0	20	20	34252682	34252848	43804502	43805184	-	+	RBM12,CPNE1,KIAA0765	PI3	34252682	43804502	uc002xds.2|uc002xdf.2|uc002xdi.2|uc010gfk.1|uc002xdl.2|uc002xdh.2|uc002xdq.2|uc002xdj.2|uc010gfj.2|uc002xdr.2|	uc002xng.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000359646,	ENST00000243924,	FrameShift 	-1:ENST00000359646, 	-1:ENST00000359646, 	-1:ENST00000243924, 	-1:ENST00000243924, 	MDKIPLKDKFQLKVKIKSKRKSQSKVQSPLSLAPAPLS*:ENST00000359646-ENST00000243924, 	1:ENST00000359646, 	2:ENST00000243924, 	5UTR:ENST00000359646, 	CDS:ENST00000243924, 	DOMAIN_UNK:ENST00000359646, 	DOMAIN_UNK:ENST00000359646, 	NO_DOMAIN:ENST00000243924, 	Repeat=SVP-1 clotting 1,Repeat=SVP-1 clotting 2,Domain=WAP;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00722,Region=2 X tandem repeats of SVP-1 like motif,:ENST00000243924, 
0.0002	4486	SRR064439	chimerascan	2	0	17	M	37356536	37360980	10579	12138	+	+	RPL19	STRF6	37360980	10579	uc002hrr.1|uc002hrq.1|	uc004cov.3|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4487	SRR064439	chimerascan	2	0	1	1	149576453	149576700	145004781	145005286	+	+	BC110832,LOC728855	BC065231	149576700	145004781	uc001esk.3|uc009wld.2|uc009wlb.1|uc001esl.3|	uc001emi.3|	breast_cancer	SRR064286,SRR064437,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	4488	SRR064439	chimerascan	2	0	1	9	11714088	11714401	35099893	35102820	-	-	FBXO2	STOML2	11714088	35102820	uc009vnb.1|	uc003zwk.2|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000354287,ENST00000376779,	ENST00000356493,ENST00000452248,	FrameShift 	1:ENST00000354287,ENST00000376779, 	103:ENST00000354287,ENST00000376779, 	-1:ENST00000356493,ENST00000452248, 	-1:ENST00000356493,ENST00000452248, 	MDGDGDPGSRRLDRSLRRGGEMGSAGERCTEGRQRARGPGDLARQTFTPAKP*:ENST00000354287-ENST00000356493,ENST00000354287-ENST00000452248,ENST00000376779-ENST00000452248,ENST00000376779-ENST00000356493, 	Intron:ENST00000354287,ENST00000376779, 	Intron:ENST00000356493,ENST00000452248, 	CDS:ENST00000354287,ENST00000376779, 	CDS:ENST00000356493,ENST00000452248, 	Domain=F-box;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00080,:ENST00000354287, NO_DOMAIN:ENST00000376779, 	Domain=FBA;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00482,Region=Carbohydrate binding;Ontology_term=ECO:0000250;evidence=ECO:0000250,Region=Carbohydrate binding;Ontology_term=ECO:0000250;evidence=ECO:0000250,:ENST00000354287, NO_DOMAIN:ENST00000376779, 	NO_DOMAIN:ENST00000356493,ENST00000452248, 	NO_DOMAIN:ENST00000356493,ENST00000452248, 
0.0004	4489	SRR064439	chimerascan	2	0	7	3	130295826	130353598	128976570	128996614	-	+	COPG2	COPG	130295826	128976570	uc003vqh.1|	uc010htb.2|uc003els.2|	breast_cancer	SRR064286,SRR064439,SRR064440,	breast_cancer,	NO_KINASE	ENST00000445977,	ENST00000314797,	FrameShift 	1:ENST00000445977, 	244:ENST00000445977, 	-1:ENST00000314797, 	-1:ENST00000314797, 	MIKKFDKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTEATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGTMLQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWINEAQEAASSDNIMVQYHALGVLYHLRKNDRLAVSKMLNKFTKSGLKSQFAYCMLIRIASRLLKETEDVTAHCLTSSRAACATSTRWWCMKPPRPSSICQAAVPKSWPRLCQCSSFSAAHPRLLSAMLLFVPSIRLP*:ENST00000445977-ENST00000314797, 	9:ENST00000445977, 	10:ENST00000314797, 	CDS:ENST00000445977, 	CDS:ENST00000314797, 	NO_DOMAIN:ENST00000445977, 	NO_DOMAIN:ENST00000445977, 	NO_DOMAIN:ENST00000314797, 	Repeat=HEAT 1,Repeat=HEAT 2,Repeat=HEAT 3,Repeat=HEAT 4,Region=Interaction with ZNF289/ARFGAP2,:ENST00000314797, 
0.0005	4490	SRR064439	chimerascan	2	0	11	11	61560150	61560500	61605250	61634825	+	+	FEN1	FADS2	61560500	61605250	uc001nsg.2|	uc010rlo.1|uc001nsj.2|	breast_cancer	SRR064286,SRR064439,	breast_cancer,	NO_KINASE	ENST00000305885,	ENST00000257261,	FrameShift 	-1:ENST00000305885, 	-1:ENST00000305885, 	-1:ENST00000257261, 	-1:ENST00000257261, 	MRAAV*:ENST00000305885-ENST00000257261, 	Intron:ENST00000305885, 	2:ENST00000257261, 	5UTR:ENST00000305885, 	CDS:ENST00000257261, 	DOMAIN_UNK:ENST00000305885, 	DOMAIN_UNK:ENST00000305885, 	NO_DOMAIN:ENST00000257261, 	Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Lumenal;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Lumenal;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=Cytochrome b5 heme-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00279,:ENST00000257261, 
0.0002	4491	SRR064439	chimerascan	2	0	11	M	828230	831991	8664	9990	+	+	EFCAB4A	OK/SW-cl.16	831991	8664	uc009ycm.1|uc001lrv.2|	uc011mfi.1|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4492	SRR064440	chimerascan	124	97	8	17	125551266	125551329	38060850	38066177	-	-	TATDN1	GSDMB	125551266	38066177	uc003yre.2|uc003yrd.2|uc010mdm.2|uc003yrd.2|uc003yre.2|uc010mdm.2|uc003yrf.2|uc003yrf.2|	uc010cwl.2|uc010cwj.2|uc002htg.2|uc010cwi.2|uc002htg.2|uc010cwi.2|uc010cwm.2|uc010wem.1|uc010cwk.2|uc010wem.1|uc002hth.2|uc010cwl.2|uc002hth.2|uc010cwj.2|uc002htg.2|uc010wem.1|uc010cwm.2|uc010cwk.2|uc010cwj.2|uc010cwj.2|uc002htg.2|uc002hth.2|uc010wem.1|uc002hth.2|uc010cwk.2|uc010cwl.2|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE																
0.4661	4493	SRR064440	chimerascan	13	9	17	8	76778284	76778376	117657056	117768258	-	-	CYTH1	EIF3H	76778284	117768258	uc002jvw.2|	uc003yob.2|uc003yob.2|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000262763,	ENST00000276682,	InFrame 	1:ENST00000262763, 	7:ENST00000262763, 	1:ENST00000276682, 	366:ENST00000276682, 	MEEDDSYDHSIGKRSKMYSRHAQRIPPGKKMASRKEGTGSTATSSSSTAGAAGKGKGKGGSGDSAVKQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKANITFEYMFEEVPIVIKNSHLINVLMWELEKKSAVADKHELLSLASSNHLGKNLQLLMDRVDEMSQDIVKYNTYMRNTSKQQQQKHQYQQRRQQENMQRQSRGEPPLPEEDLSKLFKPPQPPARMDSLLIAGQINTYCQNIKEFTAQNLGKLFMAQALQEYNN:ENST00000262763-ENST00000276682, 	1:ENST00000262763, 	-1:ENST00000276682, 	CDS:ENST00000262763, 	5UTR:ENST00000276682, 	DOMAIN_UNK:ENST00000262763, 	DOMAIN_UNK:ENST00000262763, 	DOMAIN_UNK:ENST00000276682, 	DOMAIN_UNK:ENST00000276682, 
0.9960	4494	SRR064440	chimerascan	10	4	3	3	4418014	4508954	37094117	37170640	-	-	SUMF1	LRRFIP2	4418014	37170640	uc011ast.1|uc003bpz.1|uc011ass.1|uc010hby.1|uc003bps.1|	uc003cgs.3|uc003cgr.2|uc003cgp.2|uc003cgt.3|uc011ayf.1|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000448413,ENST00000272902,	ENST00000421307,ENST00000336686,	InFrame 	1:ENST00000448413,ENST00000272902, 	337:ENST00000448413,ENST00000272902, 	30:ENST00000421307,ENST00000336686, 	721:ENST00000421307,ENST00000336686, 	MAAPALGLVCGRCPELGLVLLLLLLSLLCGAAGSQEAGTGAGAGSLAGSCGCGTPQRPGAHGSSAAAHRYSREANAPGPVPGERQLAHSKMVPIPAGVFTMGTDDPQIKQDGEAPARRVTIDAFYMDAYEVSNTEFEKFVNSTGYLTEAEKFGDSFVFEGMLSEQVKTNIQQAVAAAPWWLPVKGANWRHPEGPDSTILHRPDHPVLHVSWNDAVAYCTWAGKRLPTEAEWEYSCRGGLHNRLFPWGNKLQPKGQHYANIWQGEFPVTNTGEDGFQGTAPVDAFPPNGYGLYNIVGNAWEWTSDWWTVHHSVEETLNPKGPPSGKDRVKKGGSYMCHRAEARLAAKRAARAEARDIRMRELERQQKEYSLHSFDRKWGQIQKWLEDSERARYSHRSSHHRPYLGVEDALSIRSVGSHRYDMFKDRSSRLSSLNHSYSHSHGMKKRSSDSHKDLLSGLYFDQRNYSSLRHSKPTSAYYTRQSSSLYSDPLATYKSDRASPTANSGLLRSASLASLYNGGLYNPYGPRTPSECSYYSSRISSARSSPGFTNDDTASIVSSDRASRGRRESVVSAADYFSRSNRRGSVVSEVDDISIPDLSSLDEKSDKQYAENYTRPSSRNSASATTPLSGNSSRRGSGDTSSLIDPDTSLSELRDIYDLKDQIQDVEGRYMQGLKELKESLSEVEEKYKKAMVSNAQLDNEKNNLIYQVDTLKDVIEEQEEQMAEFYRENEEKSKELERQKHMCSVLQHKMEELKEGLRQRDELIEEKQRMQQKIDTMTKEVFDLQETLLWKDKKIGALEKQKEYIACLRNERDMLREELADLQETVKTGEKHGLVIIPDGTPNGDVSHEPVAGAITVVSQEAAQVLESAGEGPLDVRLRKLAGEKEELLSQIRKLKLQLEEERQKCSRNDGTVGDLAGLQNGSDLQFIEMQRDANRQISEYKFKLSKAEQDITTLEQSISRLEGQVLRYKTAAENAEKVEDELKAEKRKLQRELRTALDKIEEMEMTNSHLAKRLEKMKANRTALLAQQ:ENST00000448413-ENST00000421307,ENST00000448413-ENST00000336686,ENST00000272902-ENST00000421307,ENST00000272902-ENST00000336686, 	8:ENST00000448413,ENST00000272902, 	Intron:ENST00000421307,ENST00000336686, 	CDS:ENST00000448413,ENST00000272902, 	CDS:ENST00000421307,ENST00000336686, 	Domain=FGE-sulfatase;Ontology_term=ECO:0000259;evidence=ECO:0000259|Pfam:PF03781,:ENST00000448413, NO_DOMAIN:ENST00000272902, 	NO_DOMAIN:ENST00000448413, Region=Interaction with sulfatases,:ENST00000272902, 	NO_DOMAIN:ENST00000421307, Region=DVL3-binding,:ENST00000336686, 	NO_DOMAIN:ENST00000421307,ENST00000336686, 
0.0008	4495	SRR064440	chimerascan	7	2	5	5	139781429	139825560	141232683	141234001	+	-	ANKRD17,ANKHD1-EIF4EBP3,ANKHD1	PCDH1	139825560	141234001	uc003lfp.2|uc003lfr.2|uc003lfo.2|uc003lfq.1|uc010jfk.2|uc003lfs.1|	uc003llp.2|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000394723,ENST00000297183,ENST00000360839,ENST00000253810,ENST00000235510,	ENST00000287008,	FrameShift 	1:ENST00000394723,ENST00000297183,ENST00000360839,ENST00000253810,ENST00000235510, 	382:ENST00000394723,ENST00000297183,ENST00000360839,ENST00000253810,ENST00000235510, 	-1:ENST00000287008, 	-1:ENST00000287008, 	MLTDSGGGGTSFEEDLDSVAPRSAPAGASEPPPPGGVGLGIRTVRLFGEAGPASGVGSSGGGGSGSGTGGGDAALDFKLAAAVLRTGGGGGASGSDEDEVSEVESFILDQEDLDNPVLKTTSEIFLSSTAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMKAENSHNAGQVDTRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAASSGGYLDIVKLLLLHDADVNSQSATGNTALTYACAGGFVDIVKVLLNEGANIEDHNENGHTPLMEAASAGHVEVARVLLDHGAGINTHSNEFKESALTLACYKGTFALCLMSP*:ENST00000394723-ENST00000287008,ENST00000235510-ENST00000287008,ENST00000253810-ENST00000287008,ENST00000360839-ENST00000287008,ENST00000297183-ENST00000287008, 	Intron:ENST00000394723,ENST00000297183,ENST00000360839,ENST00000253810,ENST00000235510, 	Intron:ENST00000287008, 	CDS:ENST00000394723,ENST00000297183,ENST00000360839,ENST00000253810,ENST00000235510, 	CDS:ENST00000287008, 	Domain=KH;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50084,:ENST00000297183, NO_DOMAIN:ENST00000253810,ENST00000235510, Repeat=ANK 1,Repeat=ANK 2,Repeat=ANK 3,Repeat=ANK 4,Repeat=ANK 5,Repeat=ANK 6,:ENST00000394723,ENST00000360839, 	NO_DOMAIN:ENST00000297183,ENST00000253810,ENST00000235510, Repeat=ANK 7,Repeat=ANK 8,Repeat=ANK 9,Repeat=ANK 10,Repeat=ANK 11,Repeat=ANK 12,Repeat=ANK 13,Repeat=ANK 14,Repeat=ANK 15,Repeat=ANK 16,Repeat=ANK 17,Repeat=ANK 18,Repeat=ANK 19,Repeat=ANK 20,Repeat=ANK 21,Repeat=ANK 22,Repeat=ANK 23,Repeat=ANK 24,Repeat=ANK 25,Domain=KH;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00117,:ENST00000394723,ENST00000360839, 	NO_DOMAIN:ENST00000287008, 	Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=Cadherin 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00043,Domain=Cadherin 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00043,Domain=Cadherin 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00043,Domain=Cadherin 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00043,Domain=Cadherin 5;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00043,Domain=Cadherin 6;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00043,Domain=Cadherin 7;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00043,:ENST00000287008, 
0.0002	4496	SRR064440	chimerascan	7	0	1	1	147931724	147931980	145004781	145005286	-	+	FLJ39739,BC110832	BC065231	147931724	145004781	uc009wjz.1|uc009wjy.1|uc001eqn.2|uc001eqo.1|uc001eql.2|uc009wjx.1|	uc001emi.3|	breast_cancer	SRR064286,SRR064437,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	4497	SRR064440	chimerascan	7	0	1	1	144340526	144340773	145004781	145005286	-	+	LOC728855	BC065231	144340526	145004781	uc001ekv.2|uc001ekr.3|uc001ekt.3|	uc001emi.3|	breast_cancer	SRR064286,SRR064437,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	4498	SRR064440	chimerascan	7	0	1	1	143744201	143744587	145004781	145005286	-	+	FLJ39739	BC065231	143744201	145004781	uc009whx.2|uc001ejr.3|uc001ejp.3|uc009why.2|	uc001emi.3|	breast_cancer	SRR064286,SRR064437,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	4499	SRR064440	chimerascan	7	0	1	1	149576453	149576700	145004781	145005286	+	+	BC110832,LOC728855	BC065231	149576700	145004781	uc001esk.3|uc009wlc.2|uc009wld.2|uc009wlb.1|uc001esl.3|	uc001emi.3|	breast_cancer	SRR064286,SRR064437,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	4500	SRR064440	chimerascan	7	0	1	1	144520774	144520993	145004781	145005286	-	+	LOC728875,BC021732	BC065231	144520774	145004781	uc001eky.3|uc001ela.3|	uc001emi.3|	breast_cancer	SRR064438,SRR064439,SRR064440,	breast_cancer,	NO_KINASE																
0.0002	4501	SRR064440	chimerascan	7	4	17	8	38465446	38465538	79485046	79515484	+	+	RARA	PKIA	38465538	79485046	uc002huk.1|	uc003yba.2|	breast_cancer	SRR064440,	breast_cancer,	3p_KINASE																
0.0002	4502	SRR064440	chimerascan	7	0	7	7	77325213	77326662	77313168	77314643	-	-	BC037783	AF290475	77325213	77314643	uc003ugj.1|	uc003ugk.3|	breast_cancer	SRR064286,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,	NO_KINASE																
0.9894	4503	SRR064440	chimerascan	5	5	1	1	153934696	153935789	153920154	153927642	-	-	SLC39A1	CRTC2	153934696	153927642	uc001fdj.2|uc001fdl.2|uc001fdk.2|uc001fdh.2|uc001fdi.2|	uc010ped.1|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000368623,ENST00000310483,ENST00000368621,ENST00000356205,	ENST00000368633,ENST00000303569,	InFrame 	1:ENST00000368623,ENST00000310483,ENST00000368621,ENST00000356205, 	105:ENST00000368623,ENST00000310483,ENST00000368621,ENST00000356205, 	51:ENST00000368633,ENST00000303569, 	693:ENST00000368633,ENST00000303569, 	MGPWGEPELLVWRPEAVASEPPVPVGLEVKLGALVLLLVLTLLCSLVPICVLRRPGANHEGSASRQKALSLVSCFAGGVFLATCLLDLLPDYLAAIDEALAALHVTLQAQKLRLAYTRSSHYGGSLPNVNQIGSGLAEFQSPLHSPLDSSRSTRHHGLVERVQRDPRRMVSPLRRYTRHIDSSPYSPAYLSPPPESSWRRTMAWGNFPAEKGQLFRLPSALNRTSSDSALHTSVMNPSPQDTYPGPTPPSILPSRRGGILDGEMDPKVPAIEENLLDDKHLLKPWDAKKLSSSSSRPRSCEVPGINIFPSPDQPANVPVLPPAMNTGGSLPDLTNLHFPPPLPTPLDPEETAYPSLSGGNSTSNLTHTMTHLGISRGMGLGPGYDAPGLHSPLSHPSLQSSLSNPNLQASLSSPQPQLQGSHSHPSLPASSLARHVLPTTSLGHPSLSAPALSSSSSSSSTSSPVLGAPSYPASTPGASPHHRRVPLSPLSLLAGPADARRSQQQLPKQFSPTMSPTLSSITQGVPLDTSKLSTDQRLPPYPYSSPSLVLPTQPHTPKSLQQPGLPSQSCSVQSSGGQPPGRQSHYGTPYPPGPSGHGQQSYHRPMSDFNLGNLEQFSMESPSASLVLDPPGFSEGPGFLGGEGPMGGPQDPHTFNHQNLTHCSRHGSGPNIILTGDSSPGFSKEIAAALAGVPGFEVSAAGLELGLGLEDELRMEPLGLEGLNMLSDPCALLPDPAVEESFRSDRLQ:ENST00000368621-ENST00000303569,ENST00000356205-ENST00000368633,ENST00000310483-ENST00000368633,ENST00000368623-ENST00000368633,ENST00000310483-ENST00000303569,ENST00000368623-ENST00000303569,ENST00000368621-ENST00000368633,ENST00000356205-ENST00000303569, 	4:ENST00000310483, 3:ENST00000368621,ENST00000356205, 2:ENST00000368623, 	Intron:ENST00000368633,ENST00000303569, 	CDS:ENST00000368623,ENST00000310483,ENST00000368621,ENST00000356205, 	CDS:ENST00000368633,ENST00000303569, 	Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,:ENST00000368623,ENST00000310483,ENST00000368621,ENST00000356205, 	Region=Heavy metals binding;Ontology_term=ECO:0000250;evidence=ECO:0000250,:ENST00000368623,ENST00000310483,ENST00000368621,ENST00000356205, 	Domain=TORC_N;Ontology_term=ECO:0000259;evidence=ECO:0000259|Pfam:PF12884,:ENST00000303569, NO_DOMAIN:ENST00000368633, 	NO_DOMAIN:ENST00000368633,ENST00000303569, 
0.0002	4504	SRR064440	chimerascan	5	0	M	M	12338	14645	1709	4262	+	+	MTND5	TVAS5	14645	1709	uc004cox.3|	uc004cos.3|	breast_cancer	SRR064286,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,	NO_KINASE																
0.0002	4505	SRR064440	chimerascan	4	2	20	2	44483798	44486035	114346127	114356611	-	+	hNAACTE,ACOT8	DKFZp434K1323	44483798	114346127	uc010zxe.1|uc002xqa.1|	uc010fkx.1|uc002tka.2|uc002tkd.2|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	ENST00000217455,	UnSpec,	UnSpec 	1:ENST00000217455, 	87:ENST00000217455, 	-1:UnSpec, 	-1:UnSpec, 	MSSPQAPEDGQGCGDRGDPPGDLRSVLVTTVLNLEPLDEDLFRGRHYWVPAKRLFGGQIVGQALVAAAKSVSEDVHVHSLHCYFVRA:ENST00000217455-UnSpec, 	2:ENST00000217455, 	-1:UnSpec, 	CDS:ENST00000217455, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000217455, 	DOMAIN_UNK:ENST00000217455, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4506	SRR064440	chimerascan	4	2	20	15	44483798	44486035	102506273	102516807	-	+	hNAACTE,ACOT8	FLJ00038,WASH2P,DKFZp434K1323	44483798	102506273	uc010zxe.1|uc002xqa.1|	uc002cdi.2|uc010bpk.1|uc010utu.1|uc002cdj.2|uc002cdk.2|uc010utt.1|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	ENST00000217455,	UnSpec,	UnSpec 	1:ENST00000217455, 	87:ENST00000217455, 	-1:UnSpec, 	-1:UnSpec, 	MSSPQAPEDGQGCGDRGDPPGDLRSVLVTTVLNLEPLDEDLFRGRHYWVPAKRLFGGQIVGQALVAAAKSVSEDVHVHSLHCYFVRA:ENST00000217455-UnSpec, 	2:ENST00000217455, 	-1:UnSpec, 	CDS:ENST00000217455, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000217455, 	DOMAIN_UNK:ENST00000217455, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4507	SRR064440	chimerascan	4	2	20	12	44483798	44486035	78786	80502	-	+	hNAACTE,ACOT8	DKFZp434K1323	44483798	78786	uc010zxe.1|uc002xqa.1|	uc010sdb.1|uc010sda.1|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000217455,	UnSpec,	UnSpec 	1:ENST00000217455, 	87:ENST00000217455, 	-1:UnSpec, 	-1:UnSpec, 	MSSPQAPEDGQGCGDRGDPPGDLRSVLVTTVLNLEPLDEDLFRGRHYWVPAKRLFGGQIVGQALVAAAKSVSEDVHVHSLHCYFVRA:ENST00000217455-UnSpec, 	2:ENST00000217455, 	-1:UnSpec, 	CDS:ENST00000217455, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000217455, 	DOMAIN_UNK:ENST00000217455, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0003	4508	SRR064440	chimerascan	4	1	2	2	10262735	10269281	10281981	10351856	+	+	RRM2	C2orf48	10269281	10281981	uc002rah.2|	uc002rai.1|	breast_cancer	SRR064438,SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000304567,	ENST00000381786,	FrameShift 	1:ENST00000304567, 	339:ENST00000304567, 	-1:ENST00000381786, 	-1:ENST00000381786, 	MLSLRVPLAPITDPQQLQLSPLKGLSLVDKENTPPALSGTRVLASKTARRIFQEPTEPKTKAAAPGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVLGDREVQSRWSPGPRGDSTPVREMETNHPPSVRG*:ENST00000304567-ENST00000381786, 	Intron:ENST00000304567, 	-1:ENST00000381786, 	CDS:ENST00000304567, 	5UTR:ENST00000381786, 	DOMAIN_UNK:ENST00000304567, 	DOMAIN_UNK:ENST00000304567, 	DOMAIN_UNK:ENST00000381786, 	DOMAIN_UNK:ENST00000381786, 
0.0004	4509	SRR064440	chimerascan	3	3	1	1	164595273	164595333	164761731	164821045	+	+	AX748175	PBX1	164595333	164761731	uc001gcu.1|	uc010pkv.1|uc001gct.2|uc010pkw.1|uc001gcs.2|uc010pku.1|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000367897,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000367897, 	-1:ENST00000367897, 	FEYPRSPGGGTHRPPADAAGQHAVSGRRGGA*:UnSpec-ENST00000367897, 	-1:UnSpec, 	3:ENST00000367897, 	Intergenic:UnSpec, 	CDS:ENST00000367897, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000367897, 	DOMAIN_UNK:ENST00000367897, 
0.0002	4510	SRR064440	chimerascan	3	2	4	4	76649460	76649795	76567955	76587233	-	-	AK311578	G3BP2	76649460	76587233	uc010iiy.2|	uc003hir.2|uc003his.2|uc003hit.2|	breast_cancer	SRR064287,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,	NO_KINASE																
0.0001	4511	SRR064440	chimerascan	3	0	20	20	47444179	47444420	34213968	34215335	-	-	PREX1	CPNE1	47444179	34215335	uc002xtw.1|	uc002xdc.2|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	ENST00000396220,ENST00000371941,	ENST00000397443,ENST00000317677,ENST00000397442,ENST00000397445,ENST00000317619,ENST00000349942,ENST00000401607,ENST00000402424,ENST00000397446,ENST00000352393,	FrameShift 	1:ENST00000396220,ENST00000371941, 	72:ENST00000396220,ENST00000371941, 	-1:ENST00000397443,ENST00000317677,ENST00000397442,ENST00000397445,ENST00000317619,ENST00000349942,ENST00000401607,ENST00000402424,ENST00000397446,ENST00000352393, 	-1:ENST00000397443,ENST00000317677,ENST00000397442,ENST00000397445,ENST00000317619,ENST00000349942,ENST00000401607,ENST00000402424,ENST00000397446,ENST00000352393, 	MEAPSGSEPGGDGAGDCAHPDPRAPGAAAPSSGPGPCAAARESERQLRLRLCVLNEILGTERDYVGTLRFLQSASRALWMPTAKPCPKFASMALPTLHPSSTMWPGLQPRLHIRGLPRNTSCCCC*:ENST00000396220-ENST00000317619,ENST00000396220-ENST00000397442,ENST00000371941-ENST00000402424,ENST00000371941-ENST00000397442,ENST00000396220-ENST00000352393,ENST00000396220-ENST00000402424,ENST00000396220-ENST00000397443,ENST00000371941-ENST00000397445,ENST00000371941-ENST00000397446,ENST00000371941-ENST00000349942,ENST00000371941-ENST00000352393,ENST00000396220-ENST00000349942,ENST00000396220-ENST00000397445,ENST00000371941-ENST00000317619,ENST00000396220-ENST00000397446,ENST00000371941-ENST00000397443,ENST00000371941-ENST00000317677,ENST00000396220-ENST00000317677, MEAPSGSEPGGDGAGDCAHPDPRAPGAAAPSSGPGPCAAARESERQLRLRLCVLNEILGTERDYVGTLRFLQSASRALWMPTAKPCPKFASMALPTLHPSSTMWPGLQPRLHIRGLPRT*:ENST00000396220-ENST00000401607,ENST00000371941-ENST00000401607, 	1:ENST00000396220,ENST00000371941, 	Intron:ENST00000397443,ENST00000317677,ENST00000397442,ENST00000397445,ENST00000317619,ENST00000349942,ENST00000401607,ENST00000402424,ENST00000397446,ENST00000352393, 	CDS:ENST00000396220,ENST00000371941, 	CDS:ENST00000397443,ENST00000317677,ENST00000397442,ENST00000397445,ENST00000317619,ENST00000349942,ENST00000401607,ENST00000402424,ENST00000397446,ENST00000352393, 	Domain=DH;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00062,:ENST00000371941, NO_DOMAIN:ENST00000396220, 	Domain=PH;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00145,Domain=DEP 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00066,Domain=DEP 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00066,Domain=PDZ;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,:ENST00000371941, NO_DOMAIN:ENST00000396220, 	NO_DOMAIN:ENST00000397443,ENST00000317677,ENST00000397442,ENST00000397445,ENST00000317619,ENST00000349942,ENST00000401607,ENST00000402424,ENST00000397446,ENST00000352393, 	Domain=C2 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00041,Domain=C2 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00041,Domain=VWFA;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00219,:ENST00000397443,ENST00000352393, Domain=C2;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50004,:ENST00000401607,ENST00000317677,ENST00000397442, NO_DOMAIN:ENST00000349942,ENST00000317619,ENST00000402424,ENST00000397446,ENST00000397445, 
0.9857	4512	SRR064440	chimerascan	3	0	17	7	27445063	27467404	44796977	44809476	-	+	MYO18A	ZMIZ2	27445063	44796977	uc002hds.2|uc010csa.1|uc002hdu.1|uc010wbc.1|uc002hdt.1|uc010wbd.1|	uc003tls.2|uc003tlq.2|uc003tlr.2|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	ENST00000354682,ENST00000354329,ENST00000359450,	ENST00000441627,ENST00000309315,ENST00000265346,	InFrame 	1:ENST00000354682,ENST00000354329,ENST00000359450, 	679:ENST00000354682,ENST00000354329,ENST00000359450, 	123:ENST00000441627,ENST00000309315,ENST00000265346, 	920:ENST00000441627,ENST00000309315, 894:ENST00000265346, 	MFNLMKKDKDKDGGRKEKKEKKEKKERMSAAELRSLEEMSLRRGFFNLNRSSKRESKTRLEISNPIPIKVASGSDLHLTDIDSDSNRGSVILDSGHLSTASSSDDLKGEEGSFRGSVLQRAAKFGSLAKQNSQMIVKRFSFSQRSRDESASETSTPSEHSAAPSPQVEVRTLEGQLVQHPGPGIPRPGHRSRAPELVTKKFPVDLRLPPVVPLPPPTLRELELQRRPTGDFGFSLRRTTMLDRGPEGQACRRVVHFAEPGAGTKDLALGLVPGDRLVEINGHNVESKSRDEIVEMIRQSGDSVRLKVQPIPELSELSRSWLRSGEGPRREPSDAKTEEQIAAEEAWNETEKVWLVHRDGFSLASQLKSEELNLPEGKVRVKLDHDGAILDVDEDDVEKANAPSCDRLEDLASLVYLNESSVLHTLRQRYGASLLHTYAGPSLLVLGPRGAPAVYSEKVMHMFKGCRREDMAPHIYAVAQTAYRAMLMSRQDQSIILLGSSGSGKTTSCQHLVQYLATIAGISGNKVFSVEKWQALYTLLEAFGNSPTIINGNATRFSQILSLDFDQAGQVASASIQTMLLEKLRVARRPASEATFNVFYYLLACGDGTLRTELHLNHLAENNVFGIVPLAKPEEKQKAAQQFSKLQAAMKVLGISPDEQKACWFILAAIYHLGAAGATKYAGGPGGLGLPSHAARPSTDFTQAAAAAAVAAAAATATATATATVAALQEKQSQELSQYGAMGAGQSFNSQFLQHGGPRGPSVPAGMNPTGIGGVMGPSGLSPLAMNPTRAAGMTPLYAGQRLPQHGYPGPPQAQPLPRQGVKRTYSEVYPGQQYLQGGQYAPSTAQFAPSPGQPPAPSPSYPGHRLPLQQGMTQSLSVPGPTGLHYKPTRSIPGYPSSPLPGNPTPPMTPSSSVPYMSPNQEVKSPFLPDLKPNLNSLHSSPSGSGPCDELRLTFPVRDGVVLEPFRLQHNLAVSNHVFQLRDSVYKTLIMRPDLELQFKCYHHEDRQMNTNWPASVQVSVNATPLTIERGDNKTSHKPLYLKHVCQPGRNTIQITVTACCCSHLFVLQLVHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSGTIPGTPGPNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCRHIQCFDLESYLQLNCERGTWRCPVCNKTALLEGLEVDQYMLGILIYIQNSDYEEITIDPTCSWKPVPVKPDMHIKEEPDGPALKRCRTVSPAHVLMPSVMEMIAALGPGAAPFAPLQPPSVPAPSDYPGQGSSFLGPGTFPESFPPTTPSTPTLAEFTPGPPPISYQSDIPSSLLTSEKSTACLPSQMAPAGHLDPTHNPGTPGLHTSNLGAPPGPQLHHSNPPPASRQSLGQASLGPTGELAFSPATGVMGPPSMSGAGEAPEPALDLLPELTNPDELLSYLGPPDLPTNNNDDLLSLFENN:ENST00000354329-ENST00000265346, MFNLMKKDKDKDGGRKEKKEKKEKKERMSAAELRSLEEMSLRRGFFNLNRSSKRESKTRLEISNPIPIKVASGSDLHLTDIDSDSNRGSVILDSGHLSTASSSDDLKGEEGSFRGSVLQRAAKFGSLAKQNSQMIVKRFSFSQRSRDESASETSTPSEHSAAPSPQVEVRTLEGQLVQHPGPGIPRPGHRSRAPELVTKKFPVDLRLPPVVPLPPPTLRELELQRRPTGDFGFSLRRTTMLDRGPEGQACRRVVHFAEPGAGTKDLALGLVPGDRLVEINGHNVESKSRDEIVEMIRQSGDSVRLKVQPIPELSELSRSWLRSGEGPRREPSDAKTEEQIAAEEAWNETEKVWLVHRDGFSLASQLKSEELNLPEGKVRVKLDHDGAILDVDEDDVEKANAPSCDRLEDLASLVYLNESSVLHTLRQRYGASLLHTYAGPSLLVLGPRGAPAVYSEKVMHMFKGCRREDMAPHIYAVAQTAYRAMLMSRQDQSIILLGSSGSGKTTSCQHLVQYLATIAGISGNKVFSVEKWQALYTLLEAFGNSPTIINGNATRFSQILSLDFDQAGQVASASIQTMLLEKLRVARRPASEATFNVFYYLLACGDGTLRTELHLNHLAENNVFGIVPLAKPEEKQKAAQQFSKLQAAMKVLGISPDEQKACWFILAAIYHLGAAGATKYAGGPGGLGLPSHAARPSTDFTQAAAAAAVAAAAATATATATATVAALQEKQSQELSQYGAMGAGQSFNSQFLQHGGPRGPSVPAGMNPTGIGGVMGPSGLSPLAMNPTRAAGMTPLYAGQRLPQHGYPGPPQAQPLPRQGVKRTYSEVYPGQQYLQGGQYAPSTAQFAPSPGQPPAPSPSYPGHRLPLQQGMTQSLSVPGPTGLHYKPTEQFNGQGASFNGGSVSYSQPGLSGPTRSIPGYPSSPLPGNPTPPMTPSSSVPYMSPNQEVKSPFLPDLKPNLNSLHSSPSGSGPCDELRLTFPVRDGVVLEPFRLQHNLAVSNHVFQLRDSVYKTLIMRPDLELQFKCYHHEDRQMNTNWPASVQVSVNATPLTIERGDNKTSHKPLYLKHVCQPGRNTIQITVTACCCSHLFVLQLVHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSGTIPGTPGPNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCRHIQCFDLESYLQLNCERGTWRCPVCNKTALLEGLEVDQYMLGILIYIQNSDYEEITIDPTCSWKPVPVKPDMHIKEEPDGPALKRCRTVSPAHVLMPSVMEMIAALGPGAAPFAPLQPPSVPAPSDYPGQGSSFLGPGTFPESFPPTTPSTPTLAEFTPGPPPISYQSDIPSSLLTSEKSTACLPSQMAPAGHLDPTHNPGTPGLHTSNLGAPPGPQLHHSNPPPASRQSLGQASLGPTGELAFSPATGVMGPPSMSGAGEAPEPALDLLPELTNPDELLSYLGPPDLPTNNNDDLLSLFENN:ENST00000359450-ENST00000441627,ENST00000354682-ENST00000441627,ENST00000354329-ENST00000309315,ENST00000354682-ENST00000309315,ENST00000354329-ENST00000441627,ENST00000359450-ENST00000309315, 	9:ENST00000354682,ENST00000354329,ENST00000359450, 	4:ENST00000441627,ENST00000265346, 5:ENST00000309315, 	CDS:ENST00000354682,ENST00000354329,ENST00000359450, 	CDS:ENST00000441627,ENST00000309315,ENST00000265346, 	NO_DOMAIN:ENST00000354682,ENST00000354329,ENST00000359450, 	NO_DOMAIN:ENST00000354682,ENST00000354329,ENST00000359450, 	Region=Interaction with AR,:ENST00000441627,ENST00000309315,ENST00000265346, 	NO_DOMAIN:ENST00000441627,ENST00000309315,ENST00000265346, 
0.0004	4513	SRR064440	chimerascan	3	0	1	8	154561027	154580682	17446977	17500623	-	+	ADAR	PDGFRL	154561027	17446977	uc001ffk.2|uc001ffi.2|uc001ffh.2|uc001ffj.2|	uc003wxr.2|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	ENST00000292205,	ENST00000398074,ENST00000251630,	FrameShift 	1:ENST00000292205, 	1004:ENST00000292205, 	-1:ENST00000398074,ENST00000251630, 	-1:ENST00000398074,ENST00000251630, 	MMSPICDQTIDSRLKVEKATWWGRVGGGSRPHWQSPGVRPCPEEVQDPGYSLSGYYTHPFQGYEHRQLRYQQPGPGSSPSSFLLKQIEFLKGQLPEAPVIGKQTPSLPPSLPGLRPRFPVLLASSTRGRQVDIRGVPRGVHLRSQGLQRGFQHPSPRGRSLPQRGVDCLSSHFQELSIYQDQEQRILKFLEELGEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEAGTPPLWKIAVSTQAWNQHSGVVRPDGHSQGAPNSDPSLEPEDRNSTSVSEDLLEPFIAVSAQAWNQHSGVVRPDSHSQGSPNSDPGLEPEDSNSTSALEDPLEFLDMAEIKEKICDYLFNVSDSSALNLAKNIGLTKARDINAVLIDMERQGDVYRQGTTPPIWHLTDKKRERMQIKRNTNSVPETAPAAIPETKRNAEFLTCNIPTSNASNNMVTTEKVENGQEPVIKLENRQEARPEPARLKPPVHYNGPSKAGYVDFENGQWATDDIPDDLNSIRAAPGEFRAIMEMPSFYSHGLPRCSPYKKLTECQLKNPISGLLEYAQFASQTCEFNMIEQSGPPHEPRFKFQVVINGREFPPAEAGSKKVAKQDAAMKAMTILLEEAKAKDSGKSEESSHYSTEKESEKTAESQTPTPSATSFFSGKSPVTTLLECMHKLGNSCEFRLLSKEGPAHEPKFQYCVAVGAQTFPSVSAPSKKVAKQMAAEEAMKALHGEATNSMASDNQPEGMISESLDNLESMMPNKVRKIGELVRYLNTNPVGGLLEYARSHGFAAEFKLVDQSGPPHEPKFVYQAKVGGRWFPAVCAHSKKQGKQEAADAALRVLIGENEKAERMGFTEVTPVTGASLRRTMLLLSRSPEAQPKTLPLTGSTFHDQIAMLSHRCFNTLTNSFQPSLLGRKILAAIIMKKDSEDMGVVVSLGTGNRCVKGDSLSLKGETVNDCHAEIISRRGFIRFLYSELMKYNSQTAKDSIFEPAKGGEKLQIKKTVSFHLYIILANTFPRTSVQKNQERIESNLPTRR*:ENST00000292205-ENST00000398074,ENST00000292205-ENST00000251630, 	10:ENST00000292205, 	3:ENST00000251630, 2:ENST00000398074, 	CDS:ENST00000292205, 	CDS:ENST00000398074,ENST00000251630, 	NO_DOMAIN:ENST00000292205, 	NO_DOMAIN:ENST00000292205, 	NO_DOMAIN:ENST00000398074,ENST00000251630, 	Domain=Ig-like C2-type 1,Domain=Ig-like C2-type 2,:ENST00000251630, NO_DOMAIN:ENST00000398074, 
0.0004	4514	SRR064440	chimerascan	3	0	7	3	130295824	130353598	128976570	128996614	-	+	COPG2	COPG	130295824	128976570	uc003vqh.1|	uc010htb.2|uc003els.2|	breast_cancer	SRR064286,SRR064439,SRR064440,	breast_cancer,	NO_KINASE	ENST00000445977,	ENST00000314797,	FrameShift 	1:ENST00000445977, 	245:ENST00000445977, 	-1:ENST00000314797, 	-1:ENST00000314797, 	MIKKFDKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTEATEAFFAMTRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGTMLQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWINEAQEAASSDNIMVQYHALGVLYHLRKNDRLAVSKMLNKFTKSGLKSQFAYCMLIRIASRLLKETEDA*:ENST00000445977-ENST00000314797, 	9:ENST00000445977, 	10:ENST00000314797, 	CDS:ENST00000445977, 	CDS:ENST00000314797, 	NO_DOMAIN:ENST00000445977, 	NO_DOMAIN:ENST00000445977, 	NO_DOMAIN:ENST00000314797, 	Repeat=HEAT 1,Repeat=HEAT 2,Repeat=HEAT 3,Repeat=HEAT 4,Region=Interaction with ZNF289/ARFGAP2,:ENST00000314797, 
0.0108	4515	SRR064440	chimerascan	2	2	17	9	60536019	60637487	141134070	141134172	+	+	TLK1,TLK2	FAM157B	60637487	141134070	uc010ddp.2|uc002izz.3|uc010wpd.1|uc002jaa.3|uc002izx.3|	uc011mfe.1|	breast_cancer	SRR064440,	breast_cancer,	5p_KINASE	ENST00000326270,	UnSpec,	UnSpec 	1:ENST00000326270, 	277:ENST00000326270, 	-1:UnSpec, 	-1:UnSpec, 	MMEELHSLDPRRQELLEARFTGVGVSKGPLNSESSNQSLCSVGSLSDKEVETPEKKQNDQRNRKRKAEPYETSQGKGTPRGHKISDYFEFAGGSAPGTSPGRSVPPVARSSPQHSLSNPLPRRVEQPLYGLDGSAAKEATEEQSALPTLMSVMLAKPRLDTEQLAQRGAGLCFTFVSAQQNSPSSTGSGNTEHSCSSQKQISIQHRQTQSDLTIEKISALENSKNSDLEKKEGRIDDLLRANCDLRRQIDEQQKMLEKYKERLNRCVTMSKKLLIEK:ENST00000326270-UnSpec, 	Intron:ENST00000326270, 	-1:UnSpec, 	CDS:ENST00000326270, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000326270, 	DOMAIN_UNK:ENST00000326270, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0108	4516	SRR064440	chimerascan	2	2	17	3	60536019	60637487	197907626	197907735	+	+	TLK1,TLK2	FAM157A	60637487	197907626	uc010ddp.2|uc002izz.3|uc010wpd.1|uc002jaa.3|uc002izx.3|	uc011bup.1|uc011buq.1|uc011buq.1|	breast_cancer	SRR064438,SRR064440,SRR064441,	breast_cancer,	5p_KINASE	ENST00000326270,	UnSpec,	UnSpec 	1:ENST00000326270, 	277:ENST00000326270, 	-1:UnSpec, 	-1:UnSpec, 	MMEELHSLDPRRQELLEARFTGVGVSKGPLNSESSNQSLCSVGSLSDKEVETPEKKQNDQRNRKRKAEPYETSQGKGTPRGHKISDYFEFAGGSAPGTSPGRSVPPVARSSPQHSLSNPLPRRVEQPLYGLDGSAAKEATEEQSALPTLMSVMLAKPRLDTEQLAQRGAGLCFTFVSAQQNSPSSTGSGNTEHSCSSQKQISIQHRQTQSDLTIEKISALENSKNSDLEKKEGRIDDLLRANCDLRRQIDEQQKMLEKYKERLNRCVTMSKKLLIEK:ENST00000326270-UnSpec, 	Intron:ENST00000326270, 	-1:UnSpec, 	CDS:ENST00000326270, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000326270, 	DOMAIN_UNK:ENST00000326270, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0004	4517	SRR064440	chimerascan	2	2	19	19	38755202	38781215	38795015	38795646	+	+	SPINT2	IMUP,C19orf33	38781215	38795015	uc002ohr.1|uc002ohs.1|	uc002ohu.1|uc002ohv.1|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000301246,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	8:ENST00000301246, 	106:ENST00000301246, 	PGAHLPEARCGGGPRGRSQAQSPQSSGPVGGRGRSGSKARTPQLFRLQQQLQRFGHGCEVPRCWLQAAREHPGQGQEAQSEEEGEGQEGEGQEEGGSP:UnSpec-ENST00000301246, 	-1:UnSpec, 	2:ENST00000301246, 	Intergenic:UnSpec, 	CDS:ENST00000301246, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000301246, 	DOMAIN_UNK:ENST00000301246, 
0.0108	4518	SRR064440	chimerascan	2	2	17	11	60536019	60637487	141453	169052	+	-	TLK1,TLK2	AL137655	60637487	169052	uc010ddp.2|uc002izz.3|uc010wpd.1|uc002jaa.3|uc002izx.3|	uc001lnz.2|uc001lnz.2|	breast_cancer	SRR064438,SRR064440,	breast_cancer,	5p_KINASE	ENST00000326270,	UnSpec,	UnSpec 	1:ENST00000326270, 	277:ENST00000326270, 	-1:UnSpec, 	-1:UnSpec, 	MMEELHSLDPRRQELLEARFTGVGVSKGPLNSESSNQSLCSVGSLSDKEVETPEKKQNDQRNRKRKAEPYETSQGKGTPRGHKISDYFEFAGGSAPGTSPGRSVPPVARSSPQHSLSNPLPRRVEQPLYGLDGSAAKEATEEQSALPTLMSVMLAKPRLDTEQLAQRGAGLCFTFVSAQQNSPSSTGSGNTEHSCSSQKQISIQHRQTQSDLTIEKISALENSKNSDLEKKEGRIDDLLRANCDLRRQIDEQQKMLEKYKERLNRCVTMSKKLLIEK:ENST00000326270-UnSpec, 	Intron:ENST00000326270, 	-1:UnSpec, 	CDS:ENST00000326270, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000326270, 	DOMAIN_UNK:ENST00000326270, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0022	4519	SRR064440	chimerascan	2	1	4	4	77507293	77507622	77631309	77704403	+	+	AK097800	SHROOM3,hShrmL	77507622	77631309	uc011cby.1|	uc011cbx.1|uc011cbz.1|	breast_cancer	SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000264907,	InFrame 	-1:UnSpec, 	-1:UnSpec, 	107:ENST00000264907, 	1995:ENST00000264907, 	DVCTDPGHADTGASNFVSPEHLTSGPQHRKAAWSGGVKLRLKHRRSEPAGRPHSWHTTKSGEKQPDASMMQISQGMIGPPWHQSYHSSSSTSDLSNYDHAYLRRSPDQCSSQGSMESLEPSGAYPPCHLSPAKSTGSIDQLSHFHNKRDSAYSSFSTSSSILEYPHPGISGRERSGSMDNTSARGGLLEGMRQADIRYVKTVYDTRRGVSAEYEVNSSALLLQGREARASANGQGYDKWSNIPRGKGVPPPSWSQQCPSSLETATDNLPPKVGAPLPPARSDSYAAFRHRERPSSWSSLDQKRLCRPQANSLGSLKSPFIEEQLHTVLEKSPENSPPVKPKHNYTQKAQPGQPLLPTSIYPVPSLEPHFAQVPQPSVSSNGMLYPALAKESGYIAPQGACNKMATIDENGNQNGSGRPGFAFCQPLEHDLLSPVEKKPEATAKYVPSKVHFCSVPENEEDASLKRHLTPPQGNSPHSNERKSTHSNKPSSHPHSLKCPQAQAWQAGEDKRSSRLSEPWEGDFQEDHNANLWRRLEREGLGQSLSGNFGKTKSAFSSLQNIPESLRRHSSLELGRGTQEGYPGGRPTCAVNTKAEDPGRKAAPDLGSHLDRQVSYPRPEGRTGASASFNSTDPSPEEPPAPSHPHTSSLGRRGPGPGSASALQGFQYGKPHCSVLEKVSKFEQREQGSQRPSVGGSGFGHNYRPHRTVSTSSTSGNDFEETKAHIRFSESAEPLGNGEQHFKNGELKLEEASRQPCGQQLSGGASDSGRGPQRPDARLLRSQSTFQLSSEPEREPEWRDRPGSPESPLLDAPFSRAYRNSIKDAQSRVLGATSFRRRDLELGAPVASRSWRPRPSSAHVGLRSPEASASASPHTPRERHSVTPAEGDLARPVPPAARRGARRRLTPEQKKRSYSEPEKMNEVGIVEEAEPAPLGPQRNGMRFPESSVADRRRLFERDGKACSTLSLSGPELKQFQQSALADYIQRKTGKRPTSAAGCSLQEPGPLRERAQSAYLQPGPAALEGSGLASASSLSSLREPSLQPRREATLLPATVAETQQAPRDRSSSFAGGRRLGERRRGDLLSGANGGTRGTQRGDETPREPSSWGARAGKSMSAEDLLERSDVLAGPVHVRSRSSPATADKRQDVLLGQDSGFGLVKDPCYLAGPGSRSLSCSERGQEEMLPLFHHLTPRWGGSGCKAIGDSSVPSECPGTLDHQRQASRTPCPRPPLAGTQGLVTDTRAAPLTPIGTPLPSAIPSGYCSQDGQTGRQPLPPYTPAMMHRSNGHTLTQPPGPRGCEGDGPEHGVEEGTRKRVSLPQWPPPSRAKWAHAAREDSLPEESSAPDFANLKHYQKQQSLPSLCSTSDPDTPLGAPSTPGRISLRISESVLRDSPPPHEDYEDEVFVRDPHPKATSSPTFEPLPPPPPPPPSQETPVYSMDDFPPPPPHTVCEAQLDSEDPEGPRPSFNKLSKVTIARERHMPGAAHVVGSQTLASRLQTSIKGSEAESTPPSFMSVHAQLAGSLGGQPAPIQTQSLSHDPVSGTQGLEKKVSPDPQKSSEDIRTEALAKEIVHQDKSLADILDPDSRLKTTMDLMEGLFPRDVNLLKENSVKRKAIQRTVSSSGCEGKRNEDKEAVSMLVNCPAYYSVSAPKAELLNKIKEMPAEVNEEEEQADVNEKKAELIGSLTHKLETLQEAKGSLLTDIKLNNALGEEVEALISELCKPNEFDKYRMFIGDLDKVVNLLLSLSGRLARVENVLSGLGEDASNEERSSLYEKRKILAGQHEDARELKENLDRRERVVLGILANYLSEEQLQDYQHFVKMKSTLLIEQRKLDDKIKLGQEQVKCLLESLPSDFIPKAGALALPPNLTSEPIPAGGCTFSGIFPTLTSPL:UnSpec-ENST00000264907, 	-1:UnSpec, 	3:ENST00000264907, 	Intergenic:UnSpec, 	CDS:ENST00000264907, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000264907, 	DOMAIN_UNK:ENST00000264907, 
0.0004	4520	SRR064440	chimerascan	2	1	17	17	29159023	29206505	60650576	60692839	+	+	ATAD5	TLK1,TLK2	29206505	60650576	uc002hfs.1|	uc010ddp.2|uc002izx.3|uc002jaa.3|uc002izz.3|uc010wpd.1|	breast_cancer	SRR064440,	breast_cancer,	3p_KINASE	ENST00000321990,	ENST00000346027,ENST00000326270,ENST00000343388,	FrameShift 	1:ENST00000321990, 	1359:ENST00000321990, 	-1:ENST00000346027,ENST00000326270,ENST00000343388, 	-1:ENST00000346027,ENST00000326270,ENST00000343388, 	MVGVLAMAAAAAPPPVKDCEIEPCKKRKKDDDTSTCKTITKYLSPLGKTRDRVFAPPKPSNILDYFRKTSPTNEKTQLGKECKIKSPESVPVDSNKDCTTPLEMFSNVEFKKKRKRVNLSHQLNNIKTENEAPIEISSDDSKEDYSLNNDFVESSTSVLRYKKQVEVLAENIQDTKSQPNTMTSLQNSKKVNPKQGTTKNDFKKLRKRKCRDVVDLSESLPLAEELNLLKKDGKDTKQMENTTSHANSRDNVTEAAQLNDSIITVSYEEFLKSHKENKVEEIPDSTMSICVPSETVDEIVKSGYISESENSEISQQVRFKTVTVLAQVHPIPPKKTGKIPRIFLKQKQFEMENSLSDPENEQTVQKRKSNVVIQEEELELAVLEAGSSEAVKPKCTLEERQQFMKAFRQPASDALKNGVKKSSDKQKDLNEKCLYEVGRDDNSKKIMENSGIQMVSKNGNLQLHTDKGSFLKEKNKKLKKKNKKTLDTGAIPGKNREGNTQKKETTFFLKEKQYQNRMSLRQRKTEFFKSSTLFNNESLVYEDIANDDLLKVSSLCNNNKLSRKTSIPVKDIKLTQSKAESEASLLNVSTPKSTRRSGRISSTPTTETIRGIDSDDVQDNSQLKASTQKAANLSEKHSLYTAELITVPFDSESPIRMKFTRISTPKKSKKKSNKRSEKSEATDGGFTSQIRKASNTSKNISKAKQLIEKAKALHISRSKVTEEIAIPLRRSSRHQTLPERKKLSETEDSVIIIDSSPTALKHPEKNQKKLQCLNDVLGKKLNTSTKNVPGKMKVAPLFLVRKAQKAADPVPSFDESSQDTSEKSQDCDVQCKAKRDFLMSGLPDLLKRQIAKKAAALDVYNAVSTSFQRVVHVQQKDDGCCLWHLKPPSCPLLTKFKELNTKVIDLSKCGIALGEFSTLNSKLKSGNSAAVFMRTRKEFTEEVRNLLLEEIRWSNPEFSLKKYFPLLLKKQIEHQVLSSECHSKQELEADVSHKETKRKLVEAENSKSKRKKPNEYSKNLEKTNRKSEELSKRNNSSGIKLDSSKDSGTEDMLWTEKYQPQTASELIGNELAIKKLHSWLKDWKRRAELEERQNLKGKRDEKHEDFSGGIDFKGSSDDEEESRLCNTVLITGPTGVGKTAAVYACAQELGFKIFEVNASSQRSGRQILSQLKEATQSHQVDKQGVNSQKPCFFNSYYIGKSPKKISSPKKVVTSPRKVPPPSPKSSGPKRALPPKTLANYFKVSPKPKNNEEIGMLLENNKGIKNSFEQKQITQTKSTNATNSNVKDVGAEEPSRKNATSLILFEEVDVIFDEDAGFLNAIKTFMATTKRPVILTTSDPTFSLMFDGCFEEIKFSTPSLATGKDKFTEGRDRKTTENVSKAETSCHGSGPSCNQ*:ENST00000321990-ENST00000343388,ENST00000321990-ENST00000326270,ENST00000321990-ENST00000346027, 	Intron:ENST00000321990, 	11:ENST00000343388, 12:ENST00000346027,ENST00000326270, 	CDS:ENST00000321990, 	CDS:ENST00000346027,ENST00000326270,ENST00000343388, 	NO_DOMAIN:ENST00000321990, 	NO_DOMAIN:ENST00000321990, 	NO_DOMAIN:ENST00000346027,ENST00000326270,ENST00000343388, 	Domain=Protein kinase;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00159,:ENST00000346027,ENST00000326270,ENST00000343388, 
0.0002	4521	SRR064440	chimerascan	2	1	6	6	155153831	155154543	155228864	155230000	+	+	TIAM2	AK124484	155154543	155228864	uc003qqb.2|	uc003qqc.1|	breast_cancer	SRR064437,SRR064440,	breast_cancer,normal_tissue,	NO_KINASE																
0.0189	4522	SRR064440	chimerascan	2	1	1	1	204183010	204183220	204159470	204162042	-	-	GOLT1A	KISS1	204183010	204162042	uc001hat.1|uc001has.1|	uc001har.2|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	ENST00000308302,	ENST00000306118,	FrameShift 	1:ENST00000308302, 	8:ENST00000308302, 	-1:ENST00000306118, 	-1:ENST00000306118, 	MISITEWQASRHF*:ENST00000308302-ENST00000306118, 	1:ENST00000308302, 	-1:ENST00000306118, 	CDS:ENST00000308302, 	5UTR:ENST00000306118, 	DOMAIN_UNK:ENST00000308302, 	DOMAIN_UNK:ENST00000308302, 	DOMAIN_UNK:ENST00000306118, 	DOMAIN_UNK:ENST00000306118, 
0.0002	4523	SRR064440	chimerascan	2	0	M	M	7587	8295	1709	4262	+	+	X64709	TVAS5	8295	1709	uc004cou.3|	uc004cos.3|	breast_cancer	SRR064438,SRR064439,SRR064440,	breast_cancer,	NO_KINASE																
0.0002	4524	SRR064440	chimerascan	2	0	7	4	35903141	35913385	120414488	120473178	+	+	SEPT7	CR610292	35913385	120414488	uc003tey.2|uc011kau.1|uc011kav.1|uc010kxc.2|uc011kat.1|	uc003ide.3|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	ENST00000350320,	UnSpec,	UnSpec 	1:ENST00000350320, 	170:ENST00000350320, 	-1:UnSpec, 	-1:UnSpec, 	MSVSARSAAAEERSVNSSTMGQQKNLEGYVGFANLPNQVYRKSVKRGFEFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVEQSKVLIKEGGVQLLLTIVDTPGFGDAVDNSNCWQPVIDYIDSKFEDYLNAESRVNRRQMPDNRVQCCLYFIAPSGHG:ENST00000350320-UnSpec, 	Intron:ENST00000350320, 	-1:UnSpec, 	CDS:ENST00000350320, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000350320, 	DOMAIN_UNK:ENST00000350320, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0004	4525	SRR064440	chimerascan	2	0	3	10	183415606	183470041	72631594	72640930	+	+	YEATS2	SGPL1,KIAA1252	183470041	72631594	uc003fly.2|	uc009xqk.2|uc001jrm.2|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	ENST00000305135,ENST00000421660,	ENST00000509904,ENST00000496362,ENST00000373202,ENST00000519206,	FrameShift 	1:ENST00000305135,ENST00000421660, 	383:ENST00000305135,ENST00000421660, 	-1:ENST00000509904,ENST00000496362,ENST00000373202,ENST00000519206, 	-1:ENST00000509904,ENST00000496362,ENST00000373202,ENST00000519206, 	MSGIKRTIKETDPDYEDVSVALPNKRHKAIENSARDAAVQKIETIIKEQFALEMKNKEHEIEVIDQRLIEARRMMDKLRACIVANYYASAGLLKVSEGSKTCDTMVFNHPAIKKFLESPSRSSSPANQRAETPSANHSESDSLSQHNDFLSDKDNNSNMDIEERLSNNMEQRPSRNTGRDTSRITGSHKTEQRNADLTDETSRLFVKKTIVVGNVSKYIPPDKREENDQSTHKWMVYVRGSRREPSINHFVKKVWFFLHPSYKPNDLVEVREPPFHLTRRGWGEFPVRVQVHFKDSQNKRIDIIHNLKLDRTYTGLQTLGAETVVDVELHRHSLGEDCIYPQSSESDISDAPPSLPLTIPAPVKASSPIKQSHEPVPDTSVEKGGCQIQNTPSCRRLSGRLPHRLYGESRIPTGAPI*:ENST00000421660-ENST00000496362,ENST00000421660-ENST00000373202,ENST00000305135-ENST00000509904,ENST00000305135-ENST00000519206,ENST00000305135-ENST00000496362,ENST00000305135-ENST00000373202,ENST00000421660-ENST00000519206,ENST00000421660-ENST00000509904, 	Intron:ENST00000305135,ENST00000421660, 	11:ENST00000509904,ENST00000496362,ENST00000373202,ENST00000519206, 	CDS:ENST00000305135,ENST00000421660, 	CDS:ENST00000509904,ENST00000496362,ENST00000373202,ENST00000519206, 	Domain=YEATS;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00376,:ENST00000305135, NO_DOMAIN:ENST00000421660, 	NO_DOMAIN:ENST00000305135,ENST00000421660, 	NO_DOMAIN:ENST00000509904,ENST00000496362,ENST00000373202,ENST00000519206, 	NO_DOMAIN:ENST00000509904,ENST00000496362,ENST00000519206, Topological domain=Lumenal;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,:ENST00000373202, 
0.0002	4526	SRR064440	chimerascan	2	0	12	8	120933626	120933728	80831096	80915415	-	-	BX537644	TPD52,MRPS28	120933626	80915415	uc001tyk.1|	uc003ybo.2|uc010lzr.2|uc003ybp.2|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000276585,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000276585, 	-1:ENST00000276585, 	GFSKKCGILCIYAETFSSYTDGTCKG*:UnSpec-ENST00000276585, 	-1:UnSpec, 	Intron:ENST00000276585, 	Intergenic:UnSpec, 	CDS:ENST00000276585, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000276585, 	DOMAIN_UNK:ENST00000276585, 
0.9894	4527	SRR064440	chimerascan	2	0	16	14	2034150	2034477	65412532	65417132	+	-	GFER	RAB15	2034477	65417132	uc002cob.2|	uc001xhz.2|uc010aqk.2|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000248114,	ENST00000267512,	InFrame 	1:ENST00000248114, 	86:ENST00000248114, 	152:ENST00000267512, 	208:ENST00000267512, 	MAAPGERGRFHGGNLFFLPGGARSEMMDDLATDARGRGAGRRDAAASASTPAQAPTSDSPVAEDASRRRPCRACVDFKTWMRTQQKGTHQKASRRSLLGIRLMRSRNGRWEESKGSSWRRSMAWTSMKQVPAPTSTLKSHSRV:ENST00000248114-ENST00000267512, 	Intron:ENST00000248114, 	Intron:ENST00000267512, 	CDS:ENST00000248114, 	CDS:ENST00000267512, 	NO_DOMAIN:ENST00000248114, 	Domain=ERV/ALR sulfhydryl oxidase;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00654,:ENST00000248114, 	NO_DOMAIN:ENST00000267512, 	NO_DOMAIN:ENST00000267512, 
0.0003	4528	SRR064440	chimerascan	2	0	17	17	37856254	37856564	61509666	61515531	+	-	ERBB2	CYB561	37856564	61515531	uc010wek.1|	uc002jaq.2|	breast_cancer	SRR064287,SRR064438,SRR064439,SRR064440,	breast_cancer,	5p_KINASE	ENST00000269571,	ENST00000360793,	FrameShift 	1:ENST00000269571, 	24:ENST00000269571, 	-1:ENST00000360793, 	-1:ENST00000360793, 	MELAALCRWGLLLALLPPGAASTQGLSLHPHRIWNSWRRVPGHACPRGEAGPLPPATPET*:ENST00000269571-ENST00000360793, 	Intron:ENST00000269571, 	-1:ENST00000360793, 	CDS:ENST00000269571, 	5UTR:ENST00000360793, 	DOMAIN_UNK:ENST00000269571, 	DOMAIN_UNK:ENST00000269571, 	DOMAIN_UNK:ENST00000360793, 	DOMAIN_UNK:ENST00000360793, 
0.0002	4529	SRR064440	chimerascan	2	0	10	4	38680911	38691780	120414488	120473178	-	+	CDC10L	CR610292	38680911	120414488	uc009xmd.1|	uc003ide.3|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE																
0.0002	4530	SRR064440	chimerascan	2	0	17	17	20771746	20771998	20861615	20885670	+	+	AK057473,BC041488	BC043529	20771998	20861615	uc002gyg.1|uc002gyh.1|	uc002gyk.1|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE																
0.0108	4531	SRR064440	chimerascan	2	0	17	1	60536019	60637487	243219612	243259424	+	-	TLK1,TLK2	AL137733	60637487	243259424	uc010ddp.2|uc002izz.3|uc010wpd.1|uc002jaa.3|uc002izx.3|	uc001hzq.1|uc001hzq.1|	breast_cancer	SRR064440,	breast_cancer,	5p_KINASE	ENST00000326270,	UnSpec,	UnSpec 	1:ENST00000326270, 	277:ENST00000326270, 	-1:UnSpec, 	-1:UnSpec, 	MMEELHSLDPRRQELLEARFTGVGVSKGPLNSESSNQSLCSVGSLSDKEVETPEKKQNDQRNRKRKAEPYETSQGKGTPRGHKISDYFEFAGGSAPGTSPGRSVPPVARSSPQHSLSNPLPRRVEQPLYGLDGSAAKEATEEQSALPTLMSVMLAKPRLDTEQLAQRGAGLCFTFVSAQQNSPSSTGSGNTEHSCSSQKQISIQHRQTQSDLTIEKISALENSKNSDLEKKEGRIDDLLRANCDLRRQIDEQQKMLEKYKERLNRCVTMSKKLLIEK:ENST00000326270-UnSpec, 	Intron:ENST00000326270, 	-1:UnSpec, 	CDS:ENST00000326270, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000326270, 	DOMAIN_UNK:ENST00000326270, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4532	SRR064440	chimerascan	2	0	13	13	100153728	100181848	45911304	45914319	+	-	TM9SF2	FLJ44635	100181848	45914319	uc001voj.1|	uc001uzz.1|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	ENST00000376387,	UnSpec,	UnSpec 	1:ENST00000376387, 	154:ENST00000376387, 	-1:UnSpec, 	-1:UnSpec, 	MSARLPVLSPPRWPRLLLLSLLLLGAVPGPRRSGAFYLPGLAPVNFCDEEKKSDECKAEIELFVNRLDSVESVLPYEYTAFDFCQASEGKRPSENLGQVLFGERIEPSPYKFTFNKKETCKLVCTKTYHTEKAEDKQKLEFLKKSMLLNYQHHW:ENST00000376387-UnSpec, 	Intron:ENST00000376387, 	-1:UnSpec, 	CDS:ENST00000376387, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000376387, 	DOMAIN_UNK:ENST00000376387, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.5700	4533	SRR064440	chimerascan	2	0	2	6	25016250	25040710	24544332	24570263	+	-	CENPO	KIAA0319	25040710	24570263	uc002rfq.1|uc002rfo.1|uc002rfp.1|	uc011djp.1|uc011djr.1|uc011djq.1|uc010jpt.1|uc003neh.1|uc011djo.1|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	ENST00000260662,	ENST00000378214,	InFrame 	1:ENST00000260662, 	300:ENST00000260662, 	-1:ENST00000378214, 	-1:ENST00000378214, 	MEQANPLRPDGESKGGVLAHLERLETQVSRSRKQSEELQSVQAQEGALGTKIHKLRRLRDELRAVVRHRRASVKACIANVEPNQTVEINEQEALEEKLENVKAILQAYHFTGLSGKLTSRGVCVCISTAFEGNLLDSYFVDLVIQKPLRIHHHSVPVFIPLEEIAAKYLQTNIQHFLFSLCEYLNAYSGRKYQADRLQSDFAALLTGPLQRNPLCNLLSFTYKLDPGGQSFPFCARLLYKDLTATLPTDVTVTCQGVEVLSTSWEEQRASHETLFCTKPLHQVFASFTRKGEKLDMSLVS:ENST00000260662-ENST00000378214, 	Intron:ENST00000260662, 	Intron:ENST00000378214, 	3UTR:ENST00000260662, 	CDS:ENST00000378214, 	NO_DOMAIN:ENST00000260662, 	NO_DOMAIN:ENST00000260662, 	DOMAIN_UNK:ENST00000378214, 	DOMAIN_UNK:ENST00000378214, 
0.0002	4534	SRR064440	chimerascan	2	0	M	M	12338	14645	8664	9990	+	+	MTND5	OK/SW-cl.16	14645	8664	uc004cox.3|	uc011mfi.1|	breast_cancer	SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,	NO_KINASE																
0.9389	4535	SRR064440	chimerascan	2	0	19	11	51214628	51220195	70313962	70742675	-	-	SHANK1	SHANK2	51214628	70742675	uc002psx.1|	uc001oqc.2|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	ENST00000427815,ENST00000391814,ENST00000359082,ENST00000293441,	ENST00000338508,	InFrame 	1:ENST00000427815,ENST00000391814,ENST00000359082,ENST00000293441, 	358:ENST00000427815,ENST00000391814,ENST00000359082,ENST00000293441, 	369:ENST00000338508, 	1843:ENST00000338508, 	MTHSPATSEDEERHSASECPEGGSESDSSPDGPGRGPRGTRGQGSGAPGSLASVRGLQGRSMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLFQPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGLKKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHIDFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELLLFNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKQVAIIAGNFELAEYIKNHKETDIVPFREAPAYSNRRRRPPNTLAAPRVLLRSNSDNNLNASAPDWAVCSTATSHRSLSPQLLQQMPSKPEGAAKTIGSYVPGPRSRSPSLNRLGGAGEDGKRPQPLWHVGSPFALGANKDSLSAFEYPGPKRKLYSAVPGRLFVAVKPYQPQVDGEIPLHRGDRVKVLSIGEGGFWEGSARGHIGWFPAECVEEVQCKPRDSQAETRADRSKKLFRHYTVGSYDSFDTSSDCIIEEKTVVLQKKDNEGFGFVLRGAKADTPIEEFTPTPAFPALQYLESVDEGGVAWQAGLRTGDFLIEVNNENVVKVGHRQVVNMIRQGGNHLVLKVVTVTRNLDPDDTARKKAPPPPKRAPTTALTLRSKSMTSELEELVDKDKPEEIVPASKPSRAAENMAVEPRVATIKQRPSSRCFPAGSDMNSVYERQGIAVMTPTVPGSPKAPFLGIPRGTMRRQKSIDSRIFLSGITEEERQFLAPPMLKFTRSLSMPDTSEDIPPPPQSVPPSPPPPSPTTYNCPKSPTPRVYGTIKPAFNQNSAAKVSPATRSDTVATMMREKGMYFRRELDRYSLDSEDLYSRNAGPQANFRNKRGQMPENPYSEVGKIASKAVYVPAKPARRKGMLVKQSNVEDSPEKTCSIPIPTIIVKEPSTSSSGKSSQGSSMEIDPQAPEPPSQLRPDESLTVSSPFAAAIAGAVRDREKRLEARRNSPAFLSTDLGDEDVGLGPPAPRTRPSMFPEEGDFADEDSAEQLSSPMPSATPREPENHFVGGAEASAPGEAGRPLNSTSKAQGPESSPAVPSASSGTAGPGNYVHPLTGRLLDPSSPLALALSARDRAMKESQQGPKGEAPKADLNKPLYIDTKMRPSLDAGFPTVTRQNTRGPLRRQETENKYETDLGRDRKGDDKKNMLIDIMDTSQQKSAGLLMVHTVDATKLDNALQEEDEKAEVEMKPDSSPSEVPEGVSETEGALQISAAPEPTTVPGRTIVAVGSMEEAVILPFRIPPPPLASVDLDEDFIFTEPLPPPLEFANSFDIPDDRAASVPALSDLVKQKKSDTPQSPSLNSSQPTNSADSKKPASLSNCLPASFLPPPESFDAVADSGIEEVDSRSSSDHHLETTSTISTVSSISTLSSEGGENVDTCTVYADGQAFMVDKPPVPPKPKMKPIIHKSNALYQDALVEEDVDSFVIPPPAPPPPPGSAQPGMAKVLQPRTSKLWGDVTEIKSPILSGPKANVISELNSILQQMNREKLAKPGEGLDSPMGAKSASLAPRSPEIMSTISGTRSTTVTFTVRPGTSQPITLQSRPPDYESRTSGTRRAPSPVVSPTEMNKETLPAPLSAATASPSPALSDVFSLPSQPPSGDLFGLNPAGRSRSPSPSILQQPISNKPFTTKPVHLWTKPDVADWLESLNLGEHKEAFMDNEIDGSHLPNLQKEDLIDLGVTRVGHRMNIERALKQLLDR:ENST00000359082-ENST00000338508,ENST00000427815-ENST00000338508,ENST00000293441-ENST00000338508,ENST00000391814-ENST00000338508, 	8:ENST00000391814, 7:ENST00000427815,ENST00000359082,ENST00000293441, 	Intron:ENST00000338508, 	CDS:ENST00000427815,ENST00000391814,ENST00000359082,ENST00000293441, 	CDS:ENST00000338508, 	Domain=ANK_REP_REGION;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50297,:ENST00000391814, NO_DOMAIN:ENST00000427815, Repeat=ANK 1,Repeat=ANK 2,Repeat=ANK 3,Repeat=ANK 4,Repeat=ANK 5,:ENST00000359082,ENST00000293441, 	Domain=SH3;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50002,Domain=PDZ (DHR);Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50106,Domain=SAM (sterile alpha motif);Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50105,:ENST00000391814, NO_DOMAIN:ENST00000427815, Repeat=ANK 6,Domain=SH3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00192,Domain=PDZ;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=SAM;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00184,:ENST00000359082,ENST00000293441, 	Domain=SAM (sterile alpha motif);Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50105,:ENST00000338508, 	Domain=PDZ (DHR);Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50106,:ENST00000338508, 
0.0002	4536	SRR064440	chimerascan	2	0	7	4	45797642	45808617	120414488	120473178	-	+	SEPT13	CR610292	45797642	120414488	uc003tnh.2|uc003tnf.3|	uc003ide.3|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE																
0.0108	4537	SRR064440	chimerascan	2	0	17	16	60536019	60637487	90196205	90204399	+	+	TLK1,TLK2	AX747598	60637487	90196205	uc010ddp.2|uc002izz.3|uc010wpd.1|uc002jaa.3|uc002izx.3|	uc002fqr.2|uc002fqr.2|	breast_cancer	SRR064440,	breast_cancer,	5p_KINASE	ENST00000326270,	UnSpec,	UnSpec 	1:ENST00000326270, 	277:ENST00000326270, 	-1:UnSpec, 	-1:UnSpec, 	MMEELHSLDPRRQELLEARFTGVGVSKGPLNSESSNQSLCSVGSLSDKEVETPEKKQNDQRNRKRKAEPYETSQGKGTPRGHKISDYFEFAGGSAPGTSPGRSVPPVARSSPQHSLSNPLPRRVEQPLYGLDGSAAKEATEEQSALPTLMSVMLAKPRLDTEQLAQRGAGLCFTFVSAQQNSPSSTGSGNTEHSCSSQKQISIQHRQTQSDLTIEKISALENSKNSDLEKKEGRIDDLLRANCDLRRQIDEQQKMLEKYKERLNRCVTMSKKLLIEK:ENST00000326270-UnSpec, 	Intron:ENST00000326270, 	-1:UnSpec, 	CDS:ENST00000326270, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000326270, 	DOMAIN_UNK:ENST00000326270, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0108	4538	SRR064440	chimerascan	2	0	17	1	60536019	60637487	700237	708487	+	-	TLK1,TLK2	BC006361	60637487	708487	uc010ddp.2|uc002izz.3|uc010wpd.1|uc002jaa.3|uc002izx.3|	uc001abo.2|uc001abo.2|	breast_cancer	SRR064440,	breast_cancer,	5p_KINASE	ENST00000326270,	UnSpec,	UnSpec 	1:ENST00000326270, 	277:ENST00000326270, 	-1:UnSpec, 	-1:UnSpec, 	MMEELHSLDPRRQELLEARFTGVGVSKGPLNSESSNQSLCSVGSLSDKEVETPEKKQNDQRNRKRKAEPYETSQGKGTPRGHKISDYFEFAGGSAPGTSPGRSVPPVARSSPQHSLSNPLPRRVEQPLYGLDGSAAKEATEEQSALPTLMSVMLAKPRLDTEQLAQRGAGLCFTFVSAQQNSPSSTGSGNTEHSCSSQKQISIQHRQTQSDLTIEKISALENSKNSDLEKKEGRIDDLLRANCDLRRQIDEQQKMLEKYKERLNRCVTMSKKLLIEK:ENST00000326270-UnSpec, 	Intron:ENST00000326270, 	-1:UnSpec, 	CDS:ENST00000326270, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000326270, 	DOMAIN_UNK:ENST00000326270, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0001	4539	SRR064440	chimerascan	2	0	14	17	21566471	21566808	39845127	39847897	-	+	ZNF219	EIF1,A121/SUI1	21566471	39845127	uc001vzr.2|	uc002hxj.2|uc002hxk.2|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	ENST00000360947,	UnSpec,	UnSpec 	0:ENST00000360947, 	0:ENST00000360947, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000360947-UnSpec, 	Intron:ENST00000360947, 	Intron:UnSpec, 	5UTR:ENST00000360947, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000360947, 	DOMAIN_UNK:ENST00000360947, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4540	SRR064440	chimerascan	2	0	M	M	14762	15888	1709	4262	+	+	cytochrome_b	TVAS5	15888	1709	uc004coy.2|	uc004cos.3|	breast_cancer	SRR064438,SRR064439,SRR064440,	breast_cancer,	NO_KINASE																
0.0002	4541	SRR064440	chimerascan	2	0	1	4	224189609	224191356	120414488	120473178	+	+	AK124970	CR610292	224191356	120414488	uc001hog.1|	uc003ide.3|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE																
0.9989	4542	SRR064440	chimerascan	2	0	19	16	38924340	39052094	134273	136869	+	-	RYR1	C16orf35	39052094	136869	uc002oiv.1|uc002oit.2|uc002oiu.2|	uc010uua.1|uc010uuc.1|uc002cfq.2|uc002cfp.1|uc010uub.1|uc002cfr.2|uc002cfs.1|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	ENST00000355481,ENST00000359596,	ENST00000262313,ENST00000399953,ENST00000405960,	InFrame 	1:ENST00000355481,ENST00000359596, 	4203:ENST00000355481, 4208:ENST00000359596, 	514:ENST00000399953,ENST00000405960, 488:ENST00000262313, 	568:ENST00000399953,ENST00000405960, 542:ENST00000262313, 	MGDAEGEDEVQFLRTDDEVVLQCSATVLKEQLKLCLAAEGFGNRLCFLEPTSNAQNVPPDLAICCFVLEQSLSVRALQEMLANTVEAGVESSQGGGHRTLLYGHAILLRHAHSRMYLSCLTTSRSMTDKLAFDVGLQEDATGEACWWTMHPASKQRSEGEKVRVGDDIILVSVSSERYLHLSTASGELQVDASFMQTLWNMNPICSRCEEGFVTGGHVLRLFHGHMDECLTISPADSDDQRRLVYYEGGAVCTHARSLWRLEPLRISWSGSHLRWGQPLRVRHVTTGQYLALTEDQGLVVVDASKAHTKATSFCFRISKEKLDVAPKRDVEGMGPPEIKYGESLCFVQHVASGLWLTYAAPDPKALRLGVLKKKAMLHQEGHMDDALSLTRCQQEESQAARMIHSTNGLYNQFIKSLDSFSGKPRGSGPPAGTALPIEGVILSLQDLIIYFEPPSEDLQHEEKQSKLRSLRNRQSLFQEEGMLSMVLNCIDRLNVYTTAAHFAEFAGEEAAESWKEIVNLLYELLASLIRGNRSNCALFSTNLDWLVSKLDRLEASSGILEVLYCVLIESPEVLNIIQENHIKSIISLLDKHGRNHKVLDVLCSLCVCNGVAVRSNQDLITENLLPGRELLLQTNLINYVTSIRPNIFVGRAEGTTQYSKWYFEVMVDEVTPFLTAQATHLRVGWALTEGYTPYPGAGEGWGGNGVGDDLYSYGFDGLHLWTGHVARPVTSPGQHLLAPEDVISCCLDLSVPSISFRINGCPVQGVFESFNLDGLFFPVVSFSAGVKVRFLLGGRHGEFKFLPPPGYAPCHEAVLPRERLHLEPIKEYRREGPRGPHLVGPSRCLSHTDFVPCPVDTVQIVLPPHLERIREKLAENIHELWALTRIEQGWTYGPVRDDNKRLHPCLVDFHSLPEPERNYNLQMSGETLKTLLALGCHVGMADEKAEDNLKKTKLPKTYMMSNGYKPAPLDLSHVRLTPAQTTLVDRLAENGHNVWARDRVGQGWSYSAVQDIPARRNPRLVPYRLLDEATKRSNRDSLCQAVRTLLGYGYNIEPPDQEPSQVENQSRCDRVRIFRAEKSYTVQSGRWYFEFEAVTTGEMRVGWARPELRPDVELGADELAYVFNGHRGQRWHLGSEPFGRPWQPGDVVGCMIDLTENTIIFTLNGEVLMSDSGSETAFREIEIGDGFLPVCSLGPGQVGHLNLGQDVSSLRFFAICGLQEGFEPFAINMQRPVTTWFSKGLPQFEPVPLEHPHYEVSRVDGTVDTPPCLRLTHRTWGSQNSLVEMLFLRLSLPVQFHQHFRCTAGATPLAPPGLQPPAEDEARAAEPDPDYENLRRSAGGWSEAENGKEGTAKEGAPGGTPQAGGEAQPARAENEKDATTEKNKKRGFLFKAKKVAMMTQPPATPTLPRLPHDVVPADNRDDPEIILNTTTYYYSVRVFAGQEPSCVWAGWVTPDYHQHDMSFDLSKVRVVTVTMGDEQGNVHSSLKCSNCYMVWGGDFVSPGQQGRISHTDLVIGCLVDLATGLMTFTANGKESNTFFQVEPNTKLFPAVFVLPTHQNVIQFELGKQKNIMPLSAAMFQSERKNPAPQCPPRLEMQMLMPVSWSRMPNHFLQVETRRAGERLGWAVQCQEPLTMMALHIPEENRCMDILELSERLDLQRFHSHTLRLYRAVCALGNNRVAHALCSHVDQAQLLHALEDAHLPGPLRAGYYDLLISIHLESACRSRRSMLSEYIVPLTPETRAITLFPPGRSTENGHPRHGLPGVGVTTSLRPPHHFSPPCFVAALPAAGAAEAPARLSPAIPLEALRDKALRMLGEAVRDGGQHARDPVGGSVEFQFVPVLKLVSTLLVMGIFGDEDVKQILKMIEPEVFTEEEEEEDEEEEGEEEDEEEKEEDEEETAQEKEDEEKEEEEAAEGEKEEGLEEGLLQMKLPESVKLQMCHLLEYFCDQELQHRVESLAAFAERYVDKLQANQRSRYGLLIKAFSMTAAETARRTREFRSPPQEQINMLLQFKDGTDEEDCPLPEEIRQDLLDFHQDLLAHCGIQLDGEEEEPEEETTLGSRLMSLLEKVRLVKKKEEKPEEERSAEESKPRSLQELVSHMVVRWAQEDFVQSPELVRAMFSLLHRQYDGLGELLRALPRAYTISPSSVEDTMSLLECLGQIRSLLIVQMGPQEENLMIQSIGNIMNNKVFYQHPNLMRALGMHETVMEVMVNVLGGGESKEIRFPKMVTSCCRFLCYFCRISRQNQRSMFDHLSYLLENSGIGLGMQGSTPLDVAAASVIDNNELALALQEQDLEKVVSYLAGCGLQSCPMLVAKGYPDIGWNPCGGERYLDFLRFAVFVNGESVEENANVVVRLLIRKPECFGPALRGEGGSGLLAAIEEAIRISEDPARDGPGIRRDRRREHFGEEPPEENRVHLGHAIMSFYAALIDLLGRCAPEMHLIQAGKGEALRIRAILRSLVPLEDLVGIISLPLQIPTLGKDGALVQPKMSASFVPDHKASMVLFLDRVYGIENQDFLLHVLDVGFLPDMRAAASLDTATFSTTEMALALNRYLCLAVLPLITKCAPLFAGTEHRAIMVDSMLHTVYRLSRGRSLTKAQRDVIEDCLMSLCRYIRPSMLQHLLRRLVFDVPILNEFAKMPLKLLTNHYERCWKYYCLPTGWANFGVTSEEELHLTRKLFWGIFDSLAHKKYDPELYRMAMPCLCAIAGALPPDYVDASYSSKAEKKATVDAEGNFDPRPVETLNVIIPEKLDSFINKFAEYTHEKWAFDKIQNNWSYGENIDEELKTHPMLRPYKTFSEKDKEIYRWPIKESLKAMIAWEWTIEKAREGEEEKTEKKKTRKISQSAQTYDPREGYNPQPPDLSAVTLSRELQAMAEQLAENYHNTWGRKKKQELEAKGGGTHPLLVPYDTLTAKEKARDREKAQELLKFLQMNGYAVTRGLKDMELDSSSIEKRFAFGFLQQLLRWMDISQEFIAHLEAVVSSGRVEKSPHEQEIKFFAKILLPLINQYFTNHCLYFLSTPAKVLGSGGHASNKEKEMITSLFCKLAALVRHRVSLFGTDAPAVVNCLHILARSLDARTVMKSGPEIVKAGLRSFFESASEDIEKMVENLRLGKVSQARTQVKGVGQNLTYTTVALLPVLTTLFQHIAQHQFGDDVILDDVQVSCYRTLCSIYSLGTTKNTYVEKLRPALGECLARLAAAMPVAFLEPQLNEYNACSVYTTKSPRERAILGLPNSVEEMCPDIPVLERLMADIGGLAESGARYTEMPHVIEITLPMLCSYLPRWWERGPEAPPSALPAGAPPPCTAVTSDHLNSLLGNILRIIVNNLGIDEASWMKRLAVFAQPIVSRARPELLQSHFIPTIGRLRKRAGKVVSEEEQLRLEAKAEAQEGELLVRDEFSVLCRDLYALYPLLIRYVDNNRAQWLTEPNPSAEELFRMVGEIFIYWSKSHNFKREEQNFVVQNEINNMSFLTADNKSKMAKSGGSDQERTKKKRRGDRYSVQTSLIVATLKKMLPIGLNMCAPTDQDLITLAKTRYALKDTDEEVREFLHNNLHLQGKVEGSPSLRWQMALYRGVPGREEDADDPEKIVRRVQEVSAVLYYLDQTEHPYKSKKAVWHKLLSKQRRRAVVACFRMTPLYNLPTHRACNMFLESYKAAWILTEDHSFEDRMIDDLSKAGEQEEEEEEVEEKKPDPLHQLVLHFSRTALTEKSKLDEDYLYMAYADIMAKSCHLEEGGENGEAEEEVEVSFEEKQMEKQRLLYQQARLHTRGAAEMVLQMISACKGETGAMVSSTLKLGISILNGGNAEVQQKMLDYLKDKKEVGFFQSIQALMQTCSVLDLNAFERQNKAEGLGMVNEDGTVINRQNGEKVMADDEFTQDLFRFLQLLCEGHNNDFQNYLRTQTGNTTTINIIICTVDYLLRLQESISDFYWYYSGKDVIEEQGKRNFSKAMSVAKQVFNSLTEYIQGPCTGNQQSLAHSRLWDAVVGFLHVFAHMMMKLAQDSSQIELLKELLDLQKDMVVMLLSLLEGNVVNGMIARQMVDMLVESSSNVEMILKFFDMFLKLKDIVGSEAFQDYVTDPRGLISKKDFQKAMDSQKQFSGPEIQFLLSCSEADENEMINCEEFANRFQEPARDIGFNVAVLLTNLSEHVPHDPRLHNFLELAESILEYFRPYLGRIEIMGASRRIERIYFEISETNRAQWEMPQGLLHYFRGRHHLEEIMYNENTRRSQLLMLFDKFRSVLVVTTHEDPVIAVFQALLP:ENST00000355481-ENST00000262313,ENST00000355481-ENST00000405960,ENST00000355481-ENST00000399953, MGDAEGEDEVQFLRTDDEVVLQCSATVLKEQLKLCLAAEGFGNRLCFLEPTSNAQNVPPDLAICCFVLEQSLSVRALQEMLANTVEAGVESSQGGGHRTLLYGHAILLRHAHSRMYLSCLTTSRSMTDKLAFDVGLQEDATGEACWWTMHPASKQRSEGEKVRVGDDIILVSVSSERYLHLSTASGELQVDASFMQTLWNMNPICSRCEEGFVTGGHVLRLFHGHMDECLTISPADSDDQRRLVYYEGGAVCTHARSLWRLEPLRISWSGSHLRWGQPLRVRHVTTGQYLALTEDQGLVVVDASKAHTKATSFCFRISKEKLDVAPKRDVEGMGPPEIKYGESLCFVQHVASGLWLTYAAPDPKALRLGVLKKKAMLHQEGHMDDALSLTRCQQEESQAARMIHSTNGLYNQFIKSLDSFSGKPRGSGPPAGTALPIEGVILSLQDLIIYFEPPSEDLQHEEKQSKLRSLRNRQSLFQEEGMLSMVLNCIDRLNVYTTAAHFAEFAGEEAAESWKEIVNLLYELLASLIRGNRSNCALFSTNLDWLVSKLDRLEASSGILEVLYCVLIESPEVLNIIQENHIKSIISLLDKHGRNHKVLDVLCSLCVCNGVAVRSNQDLITENLLPGRELLLQTNLINYVTSIRPNIFVGRAEGTTQYSKWYFEVMVDEVTPFLTAQATHLRVGWALTEGYTPYPGAGEGWGGNGVGDDLYSYGFDGLHLWTGHVARPVTSPGQHLLAPEDVISCCLDLSVPSISFRINGCPVQGVFESFNLDGLFFPVVSFSAGVKVRFLLGGRHGEFKFLPPPGYAPCHEAVLPRERLHLEPIKEYRREGPRGPHLVGPSRCLSHTDFVPCPVDTVQIVLPPHLERIREKLAENIHELWALTRIEQGWTYGPVRDDNKRLHPCLVDFHSLPEPERNYNLQMSGETLKTLLALGCHVGMADEKAEDNLKKTKLPKTYMMSNGYKPAPLDLSHVRLTPAQTTLVDRLAENGHNVWARDRVGQGWSYSAVQDIPARRNPRLVPYRLLDEATKRSNRDSLCQAVRTLLGYGYNIEPPDQEPSQVENQSRCDRVRIFRAEKSYTVQSGRWYFEFEAVTTGEMRVGWARPELRPDVELGADELAYVFNGHRGQRWHLGSEPFGRPWQPGDVVGCMIDLTENTIIFTLNGEVLMSDSGSETAFREIEIGDGFLPVCSLGPGQVGHLNLGQDVSSLRFFAICGLQEGFEPFAINMQRPVTTWFSKGLPQFEPVPLEHPHYEVSRVDGTVDTPPCLRLTHRTWGSQNSLVEMLFLRLSLPVQFHQHFRCTAGATPLAPPGLQPPAEDEARAAEPDPDYENLRRSAGGWSEAENGKEGTAKEGAPGGTPQAGGEAQPARAENEKDATTEKNKKRGFLFKAKKVAMMTQPPATPTLPRLPHDVVPADNRDDPEIILNTTTYYYSVRVFAGQEPSCVWAGWVTPDYHQHDMSFDLSKVRVVTVTMGDEQGNVHSSLKCSNCYMVWGGDFVSPGQQGRISHTDLVIGCLVDLATGLMTFTANGKESNTFFQVEPNTKLFPAVFVLPTHQNVIQFELGKQKNIMPLSAAMFQSERKNPAPQCPPRLEMQMLMPVSWSRMPNHFLQVETRRAGERLGWAVQCQEPLTMMALHIPEENRCMDILELSERLDLQRFHSHTLRLYRAVCALGNNRVAHALCSHVDQAQLLHALEDAHLPGPLRAGYYDLLISIHLESACRSRRSMLSEYIVPLTPETRAITLFPPGRSTENGHPRHGLPGVGVTTSLRPPHHFSPPCFVAALPAAGAAEAPARLSPAIPLEALRDKALRMLGEAVRDGGQHARDPVGGSVEFQFVPVLKLVSTLLVMGIFGDEDVKQILKMIEPEVFTEEEEEEDEEEEGEEEDEEEKEEDEEETAQEKEDEEKEEEEAAEGEKEEGLEEGLLQMKLPESVKLQMCHLLEYFCDQELQHRVESLAAFAERYVDKLQANQRSRYGLLIKAFSMTAAETARRTREFRSPPQEQINMLLQFKDGTDEEDCPLPEEIRQDLLDFHQDLLAHCGIQLDGEEEEPEEETTLGSRLMSLLEKVRLVKKKEEKPEEERSAEESKPRSLQELVSHMVVRWAQEDFVQSPELVRAMFSLLHRQYDGLGELLRALPRAYTISPSSVEDTMSLLECLGQIRSLLIVQMGPQEENLMIQSIGNIMNNKVFYQHPNLMRALGMHETVMEVMVNVLGGGESKEIRFPKMVTSCCRFLCYFCRISRQNQRSMFDHLSYLLENSGIGLGMQGSTPLDVAAASVIDNNELALALQEQDLEKVVSYLAGCGLQSCPMLVAKGYPDIGWNPCGGERYLDFLRFAVFVNGESVEENANVVVRLLIRKPECFGPALRGEGGSGLLAAIEEAIRISEDPARDGPGIRRDRRREHFGEEPPEENRVHLGHAIMSFYAALIDLLGRCAPEMHLIQAGKGEALRIRAILRSLVPLEDLVGIISLPLQIPTLGKDGALVQPKMSASFVPDHKASMVLFLDRVYGIENQDFLLHVLDVGFLPDMRAAASLDTATFSTTEMALALNRYLCLAVLPLITKCAPLFAGTEHRAIMVDSMLHTVYRLSRGRSLTKAQRDVIEDCLMSLCRYIRPSMLQHLLRRLVFDVPILNEFAKMPLKLLTNHYERCWKYYCLPTGWANFGVTSEEELHLTRKLFWGIFDSLAHKKYDPELYRMAMPCLCAIAGALPPDYVDASYSSKAEKKATVDAEGNFDPRPVETLNVIIPEKLDSFINKFAEYTHEKWAFDKIQNNWSYGENIDEELKTHPMLRPYKTFSEKDKEIYRWPIKESLKAMIAWEWTIEKAREGEEEKTEKKKTRKISQSAQTYDPREGYNPQPPDLSAVTLSRELQAMAEQLAENYHNTWGRKKKQELEAKGGGTHPLLVPYDTLTAKEKARDREKAQELLKFLQMNGYAVTRGLKDMELDSSSIEKRFAFGFLQQLLRWMDISQEFIAHLEAVVSSGRVEKSPHEQEIKFFAKILLPLINQYFTNHCLYFLSTPAKVLGSGGHASNKEKEMITSLFCKLAALVRHRVSLFGTDAPAVVNCLHILARSLDARTVMKSGPEIVKAGLRSFFESASEDIEKMVENLRLGKVSQARTQVKGVGQNLTYTTVALLPVLTTLFQHIAQHQFGDDVILDDVQVSCYRTLCSIYSLGTTKNTYVEKLRPALGECLARLAAAMPVAFLEPQLNEYNACSVYTTKSPRERAILGLPNSVEEMCPDIPVLERLMADIGGLAESGARYTEMPHVIEITLPMLCSYLPRWWERGPEAPPSALPAGAPPPCTAVTSDHLNSLLGNILRIIVNNLGIDEASWMKRLAVFAQPIVSRARPELLQSHFIPTIGRLRKRAGKVVSEEEQLRLEAKAEAQEGELLVRDEFSVLCRDLYALYPLLIRYVDNNRAQWLTEPNPSAEELFRMVGEIFIYWSKSHNFKREEQNFVVQNEINNMSFLTADNKSKMAKAGDIQSGGSDQERTKKKRRGDRYSVQTSLIVATLKKMLPIGLNMCAPTDQDLITLAKTRYALKDTDEEVREFLHNNLHLQGKVEGSPSLRWQMALYRGVPGREEDADDPEKIVRRVQEVSAVLYYLDQTEHPYKSKKAVWHKLLSKQRRRAVVACFRMTPLYNLPTHRACNMFLESYKAAWILTEDHSFEDRMIDDLSKAGEQEEEEEEVEEKKPDPLHQLVLHFSRTALTEKSKLDEDYLYMAYADIMAKSCHLEEGGENGEAEEEVEVSFEEKQMEKQRLLYQQARLHTRGAAEMVLQMISACKGETGAMVSSTLKLGISILNGGNAEVQQKMLDYLKDKKEVGFFQSIQALMQTCSVLDLNAFERQNKAEGLGMVNEDGTVINRQNGEKVMADDEFTQDLFRFLQLLCEGHNNDFQNYLRTQTGNTTTINIIICTVDYLLRLQESISDFYWYYSGKDVIEEQGKRNFSKAMSVAKQVFNSLTEYIQGPCTGNQQSLAHSRLWDAVVGFLHVFAHMMMKLAQDSSQIELLKELLDLQKDMVVMLLSLLEGNVVNGMIARQMVDMLVESSSNVEMILKFFDMFLKLKDIVGSEAFQDYVTDPRGLISKKDFQKAMDSQKQFSGPEIQFLLSCSEADENEMINCEEFANRFQEPARDIGFNVAVLLTNLSEHVPHDPRLHNFLELAESILEYFRPYLGRIEIMGASRRIERIYFEISETNRAQWEMPQGLLHYFRGRHHLEEIMYNENTRRSQLLMLFDKFRSVLVVTTHEDPVIAVFQALLP:ENST00000359596-ENST00000399953,ENST00000359596-ENST00000405960, 	Intron:ENST00000355481,ENST00000359596, 	Intron:ENST00000262313,ENST00000399953,ENST00000405960, 	CDS:ENST00000355481,ENST00000359596, 	CDS:ENST00000262313,ENST00000399953,ENST00000405960, 	Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=MIR 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00131,Domain=MIR 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00131,Domain=MIR 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00131,Domain=MIR 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00131,Domain=MIR 5;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00131,Domain=B30.2/SPRY 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00548,Repeat=1,Repeat=2,Domain=B30.2/SPRY 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00548,Repeat=3%3B truncated,Domain=B30.2/SPRY 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00548,Repeat=4%3B truncated,Repeat=5,Repeat=6,Region=6 X approximate repeats,Region=Interaction with CALM,:ENST00000355481,ENST00000359596, 	NO_DOMAIN:ENST00000355481,ENST00000359596, 	NO_DOMAIN:ENST00000262313,ENST00000399953,ENST00000405960, 	NO_DOMAIN:ENST00000262313,ENST00000399953,ENST00000405960, 
0.0002	4543	SRR064440	chimerascan	2	0	19	16	10946685	10946983	31202063	31203097	-	+	TMED1	FUS/CHOP,FUS	10946685	31202063	uc002mpy.2|	uc002ebh.2|uc002ebg.2|uc002ebj.2|uc002ebi.2|uc002ebf.2|	breast_cancer	SRR064286,SRR064440,	breast_cancer,	NO_KINASE	ENST00000214869,	ENST00000394533,ENST00000254108,ENST00000433338,	FrameShift 	1:ENST00000214869, 	60:ENST00000214869, 	-1:ENST00000394533,ENST00000254108,ENST00000433338, 	-1:ENST00000394533,ENST00000254108,ENST00000433338, 	MMAAGAALALALWLLMPPVEVGGAGPPPIQDGEFTFLLPAGRKQCFYQSAPANASLETEYQPVRI*:ENST00000214869-ENST00000433338,ENST00000214869-ENST00000254108,ENST00000214869-ENST00000394533, 	1:ENST00000214869, 	13:ENST00000394533,ENST00000254108,ENST00000433338, 	CDS:ENST00000214869, 	CDS:ENST00000394533,ENST00000254108,ENST00000433338, 	Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=GOLD;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00096,:ENST00000214869, 	Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,:ENST00000214869, 	NO_DOMAIN:ENST00000394533,ENST00000254108,ENST00000433338, 	Domain=RRM;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00176,:ENST00000254108, NO_DOMAIN:ENST00000394533,ENST00000433338, 
0.0002	4544	SRR064440	chimerascan	2	0	12	M	53293559	53298868	1709	4262	-	+	KRT8	TVAS5	53293559	1709	uc009zmj.2|	uc004cos.3|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	ENST00000293308,	UnSpec,	UnSpec 	1:ENST00000293308, 	326:ENST00000293308, 	-1:UnSpec, 	-1:UnSpec, 	MSIRVTQKSYKVSTSGPRAFSSRSYTSGPGSRISSSSFSRVGSSNFRGGLGGGYGGASGMGGITAVTVNQSLLSPLVLEVDPNIQAVRTQEKEQIKTLNNKFASFIDKVRFLEQQNKMLETKWSLLQQQKTARSNMDNMFESYINNLRRQLETLGQEKLKLEAELGNMQGLVEDFKNKYEDEINKRTEMENEFVLIKKDVDEAYMNKVELESRLEGLTDEINFLRQLYEEEIRELQSQISDTSVVLSMDNSRSLDMDSIIAEVKAQYEDIANRSRAEAESMYQIKYEELQSLAGKHGDDLRRTKTEISEMNRNISRLQAEIEGLKG:ENST00000293308-UnSpec, 	5:ENST00000293308, 	-1:UnSpec, 	CDS:ENST00000293308, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000293308, 	DOMAIN_UNK:ENST00000293308, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4545	SRR064441	chimerascan	182	158	8	17	125551266	125551329	38060850	38066177	-	-	TATDN1	GSDMB	125551266	38066177	uc010mdm.2|uc010mdm.2|	uc010cwl.2|uc002hth.2|uc010cwl.2|uc002htg.2|uc010cwj.2|uc002hth.2|uc010cwi.2|uc002htg.2|uc010cwi.2|uc010cwi.2|uc010cwm.2|uc010cwk.2|uc010cwj.2|uc010wem.1|uc010cwk.2|uc010wem.1|uc002hth.2|uc010cwl.2|uc010cwj.2|uc010cwj.2|uc002hth.2|uc010cwj.2|uc010wem.1|uc002htg.2|uc002htg.2|uc010wem.1|uc010cwk.2|uc010cwm.2|uc010cwk.2|uc010cwm.2|uc010wem.1|uc010cwl.2|uc010cwj.2|uc002htg.2|uc002hth.2|uc010wem.1|uc010cwk.2|uc010cwl.2|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE																
0.4661	4546	SRR064441	chimerascan	16	1	17	8	76778284	76778376	117657056	117768258	-	-	CYTH1	EIF3H	76778284	117768258	uc002jvw.2|uc002jvw.2|	uc003yob.2|uc003yob.2|uc003yob.2|uc003yoa.2|uc011lhz.1|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000262763,	ENST00000276682,	InFrame 	1:ENST00000262763, 	7:ENST00000262763, 	1:ENST00000276682, 	366:ENST00000276682, 	MEEDDSYDHSIGKRSKMYSRHAQRIPPGKKMASRKEGTGSTATSSSSTAGAAGKGKGKGGSGDSAVKQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKANITFEYMFEEVPIVIKNSHLINVLMWELEKKSAVADKHELLSLASSNHLGKNLQLLMDRVDEMSQDIVKYNTYMRNTSKQQQQKHQYQQRRQQENMQRQSRGEPPLPEEDLSKLFKPPQPPARMDSLLIAGQINTYCQNIKEFTAQNLGKLFMAQALQEYNN:ENST00000262763-ENST00000276682, 	1:ENST00000262763, 	-1:ENST00000276682, 	CDS:ENST00000262763, 	5UTR:ENST00000276682, 	DOMAIN_UNK:ENST00000262763, 	DOMAIN_UNK:ENST00000262763, 	DOMAIN_UNK:ENST00000276682, 	DOMAIN_UNK:ENST00000276682, 
0.0008	4547	SRR064441	chimerascan	8	3	5	5	139781429	139825560	141232683	141234001	+	-	ANKRD17,ANKHD1-EIF4EBP3,ANKHD1	PCDH1	139825560	141234001	uc003lfp.2|uc003lfr.2|uc003lfr.2|uc003lfo.2|uc003lfo.2|uc003lfq.1|uc010jfk.2|uc003lfs.1|uc003lfs.1|uc003lfp.2|uc003lfq.1|uc010jfk.2|	uc003llp.2|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000394723,ENST00000297183,ENST00000360839,ENST00000253810,ENST00000235510,	ENST00000287008,	FrameShift 	1:ENST00000394723,ENST00000297183,ENST00000360839,ENST00000253810,ENST00000235510, 	382:ENST00000394723,ENST00000297183,ENST00000360839,ENST00000253810,ENST00000235510, 	-1:ENST00000287008, 	-1:ENST00000287008, 	MLTDSGGGGTSFEEDLDSVAPRSAPAGASEPPPPGGVGLGIRTVRLFGEAGPASGVGSSGGGGSGSGTGGGDAALDFKLAAAVLRTGGGGGASGSDEDEVSEVESFILDQEDLDNPVLKTTSEIFLSSTAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMKAENSHNAGQVDTRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAASSGGYLDIVKLLLLHDADVNSQSATGNTALTYACAGGFVDIVKVLLNEGANIEDHNENGHTPLMEAASAGHVEVARVLLDHGAGINTHSNEFKESALTLACYKGTFALCLMSP*:ENST00000394723-ENST00000287008,ENST00000235510-ENST00000287008,ENST00000253810-ENST00000287008,ENST00000360839-ENST00000287008,ENST00000297183-ENST00000287008, 	Intron:ENST00000394723,ENST00000297183,ENST00000360839,ENST00000253810,ENST00000235510, 	Intron:ENST00000287008, 	CDS:ENST00000394723,ENST00000297183,ENST00000360839,ENST00000253810,ENST00000235510, 	CDS:ENST00000287008, 	Domain=KH;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50084,:ENST00000297183, NO_DOMAIN:ENST00000253810,ENST00000235510, Repeat=ANK 1,Repeat=ANK 2,Repeat=ANK 3,Repeat=ANK 4,Repeat=ANK 5,Repeat=ANK 6,:ENST00000394723,ENST00000360839, 	NO_DOMAIN:ENST00000297183,ENST00000253810,ENST00000235510, Repeat=ANK 7,Repeat=ANK 8,Repeat=ANK 9,Repeat=ANK 10,Repeat=ANK 11,Repeat=ANK 12,Repeat=ANK 13,Repeat=ANK 14,Repeat=ANK 15,Repeat=ANK 16,Repeat=ANK 17,Repeat=ANK 18,Repeat=ANK 19,Repeat=ANK 20,Repeat=ANK 21,Repeat=ANK 22,Repeat=ANK 23,Repeat=ANK 24,Repeat=ANK 25,Domain=KH;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00117,:ENST00000394723,ENST00000360839, 	NO_DOMAIN:ENST00000287008, 	Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=Cadherin 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00043,Domain=Cadherin 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00043,Domain=Cadherin 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00043,Domain=Cadherin 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00043,Domain=Cadherin 5;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00043,Domain=Cadherin 6;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00043,Domain=Cadherin 7;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00043,:ENST00000287008, 
0.0002	4548	SRR064441	chimerascan	7	2	4	4	76649460	76649795	76567955	76587233	-	-	AK311578	G3BP2	76649460	76587233	uc010iiy.2|	uc003hir.2|uc003his.2|uc003hit.2|	breast_cancer	SRR064287,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,	NO_KINASE																
0.0108	4549	SRR064441	chimerascan	7	1	17	1	60536019	60637487	243219612	243260601	+	-	TLK1,TLK2	AL137733	60637487	243260601	uc010ddp.2|uc002izz.3|uc010wpd.1|uc002jaa.3|uc002izx.3|	uc001hzq.1|	breast_cancer	SRR064438,SRR064441,	breast_cancer,	5p_KINASE	ENST00000326270,	UnSpec,	UnSpec 	1:ENST00000326270, 	277:ENST00000326270, 	-1:UnSpec, 	-1:UnSpec, 	MMEELHSLDPRRQELLEARFTGVGVSKGPLNSESSNQSLCSVGSLSDKEVETPEKKQNDQRNRKRKAEPYETSQGKGTPRGHKISDYFEFAGGSAPGTSPGRSVPPVARSSPQHSLSNPLPRRVEQPLYGLDGSAAKEATEEQSALPTLMSVMLAKPRLDTEQLAQRGAGLCFTFVSAQQNSPSSTGSGNTEHSCSSQKQISIQHRQTQSDLTIEKISALENSKNSDLEKKEGRIDDLLRANCDLRRQIDEQQKMLEKYKERLNRCVTMSKKLLIEK:ENST00000326270-UnSpec, 	Intron:ENST00000326270, 	-1:UnSpec, 	CDS:ENST00000326270, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000326270, 	DOMAIN_UNK:ENST00000326270, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0108	4550	SRR064441	chimerascan	7	1	17	3	60536019	60637487	197907626	197935258	+	+	TLK1,TLK2	FAM157A	60637487	197907626	uc010ddp.2|uc002izz.3|uc010wpd.1|uc002jaa.3|uc002izx.3|	uc011buq.1|	breast_cancer	SRR064438,SRR064440,SRR064441,	breast_cancer,	5p_KINASE	ENST00000326270,	UnSpec,	UnSpec 	1:ENST00000326270, 	277:ENST00000326270, 	-1:UnSpec, 	-1:UnSpec, 	MMEELHSLDPRRQELLEARFTGVGVSKGPLNSESSNQSLCSVGSLSDKEVETPEKKQNDQRNRKRKAEPYETSQGKGTPRGHKISDYFEFAGGSAPGTSPGRSVPPVARSSPQHSLSNPLPRRVEQPLYGLDGSAAKEATEEQSALPTLMSVMLAKPRLDTEQLAQRGAGLCFTFVSAQQNSPSSTGSGNTEHSCSSQKQISIQHRQTQSDLTIEKISALENSKNSDLEKKEGRIDDLLRANCDLRRQIDEQQKMLEKYKERLNRCVTMSKKLLIEK:ENST00000326270-UnSpec, 	Intron:ENST00000326270, 	-1:UnSpec, 	CDS:ENST00000326270, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000326270, 	DOMAIN_UNK:ENST00000326270, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0108	4551	SRR064441	chimerascan	7	1	17	1	60536019	60637487	700237	709660	+	-	TLK1,TLK2	BC006361	60637487	709660	uc010ddp.2|uc002izz.3|uc010wpd.1|uc002jaa.3|uc002izx.3|	uc001abo.2|	breast_cancer	SRR064438,SRR064441,	breast_cancer,	5p_KINASE	ENST00000326270,	UnSpec,	UnSpec 	1:ENST00000326270, 	277:ENST00000326270, 	-1:UnSpec, 	-1:UnSpec, 	MMEELHSLDPRRQELLEARFTGVGVSKGPLNSESSNQSLCSVGSLSDKEVETPEKKQNDQRNRKRKAEPYETSQGKGTPRGHKISDYFEFAGGSAPGTSPGRSVPPVARSSPQHSLSNPLPRRVEQPLYGLDGSAAKEATEEQSALPTLMSVMLAKPRLDTEQLAQRGAGLCFTFVSAQQNSPSSTGSGNTEHSCSSQKQISIQHRQTQSDLTIEKISALENSKNSDLEKKEGRIDDLLRANCDLRRQIDEQQKMLEKYKERLNRCVTMSKKLLIEK:ENST00000326270-UnSpec, 	Intron:ENST00000326270, 	-1:UnSpec, 	CDS:ENST00000326270, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000326270, 	DOMAIN_UNK:ENST00000326270, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0022	4552	SRR064441	chimerascan	6	1	4	4	77507293	77507622	77631309	77704403	+	+	AK097800	SHROOM3,hShrmL	77507622	77631309	uc011cby.1|	uc011cbx.1|uc011cbz.1|	breast_cancer	SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000264907,	InFrame 	-1:UnSpec, 	-1:UnSpec, 	107:ENST00000264907, 	1995:ENST00000264907, 	DVCTDPGHADTGASNFVSPEHLTSGPQHRKAAWSGGVKLRLKHRRSEPAGRPHSWHTTKSGEKQPDASMMQISQGMIGPPWHQSYHSSSSTSDLSNYDHAYLRRSPDQCSSQGSMESLEPSGAYPPCHLSPAKSTGSIDQLSHFHNKRDSAYSSFSTSSSILEYPHPGISGRERSGSMDNTSARGGLLEGMRQADIRYVKTVYDTRRGVSAEYEVNSSALLLQGREARASANGQGYDKWSNIPRGKGVPPPSWSQQCPSSLETATDNLPPKVGAPLPPARSDSYAAFRHRERPSSWSSLDQKRLCRPQANSLGSLKSPFIEEQLHTVLEKSPENSPPVKPKHNYTQKAQPGQPLLPTSIYPVPSLEPHFAQVPQPSVSSNGMLYPALAKESGYIAPQGACNKMATIDENGNQNGSGRPGFAFCQPLEHDLLSPVEKKPEATAKYVPSKVHFCSVPENEEDASLKRHLTPPQGNSPHSNERKSTHSNKPSSHPHSLKCPQAQAWQAGEDKRSSRLSEPWEGDFQEDHNANLWRRLEREGLGQSLSGNFGKTKSAFSSLQNIPESLRRHSSLELGRGTQEGYPGGRPTCAVNTKAEDPGRKAAPDLGSHLDRQVSYPRPEGRTGASASFNSTDPSPEEPPAPSHPHTSSLGRRGPGPGSASALQGFQYGKPHCSVLEKVSKFEQREQGSQRPSVGGSGFGHNYRPHRTVSTSSTSGNDFEETKAHIRFSESAEPLGNGEQHFKNGELKLEEASRQPCGQQLSGGASDSGRGPQRPDARLLRSQSTFQLSSEPEREPEWRDRPGSPESPLLDAPFSRAYRNSIKDAQSRVLGATSFRRRDLELGAPVASRSWRPRPSSAHVGLRSPEASASASPHTPRERHSVTPAEGDLARPVPPAARRGARRRLTPEQKKRSYSEPEKMNEVGIVEEAEPAPLGPQRNGMRFPESSVADRRRLFERDGKACSTLSLSGPELKQFQQSALADYIQRKTGKRPTSAAGCSLQEPGPLRERAQSAYLQPGPAALEGSGLASASSLSSLREPSLQPRREATLLPATVAETQQAPRDRSSSFAGGRRLGERRRGDLLSGANGGTRGTQRGDETPREPSSWGARAGKSMSAEDLLERSDVLAGPVHVRSRSSPATADKRQDVLLGQDSGFGLVKDPCYLAGPGSRSLSCSERGQEEMLPLFHHLTPRWGGSGCKAIGDSSVPSECPGTLDHQRQASRTPCPRPPLAGTQGLVTDTRAAPLTPIGTPLPSAIPSGYCSQDGQTGRQPLPPYTPAMMHRSNGHTLTQPPGPRGCEGDGPEHGVEEGTRKRVSLPQWPPPSRAKWAHAAREDSLPEESSAPDFANLKHYQKQQSLPSLCSTSDPDTPLGAPSTPGRISLRISESVLRDSPPPHEDYEDEVFVRDPHPKATSSPTFEPLPPPPPPPPSQETPVYSMDDFPPPPPHTVCEAQLDSEDPEGPRPSFNKLSKVTIARERHMPGAAHVVGSQTLASRLQTSIKGSEAESTPPSFMSVHAQLAGSLGGQPAPIQTQSLSHDPVSGTQGLEKKVSPDPQKSSEDIRTEALAKEIVHQDKSLADILDPDSRLKTTMDLMEGLFPRDVNLLKENSVKRKAIQRTVSSSGCEGKRNEDKEAVSMLVNCPAYYSVSAPKAELLNKIKEMPAEVNEEEEQADVNEKKAELIGSLTHKLETLQEAKGSLLTDIKLNNALGEEVEALISELCKPNEFDKYRMFIGDLDKVVNLLLSLSGRLARVENVLSGLGEDASNEERSSLYEKRKILAGQHEDARELKENLDRRERVVLGILANYLSEEQLQDYQHFVKMKSTLLIEQRKLDDKIKLGQEQVKCLLESLPSDFIPKAGALALPPNLTSEPIPAGGCTFSGIFPTLTSPL:UnSpec-ENST00000264907, 	-1:UnSpec, 	3:ENST00000264907, 	Intergenic:UnSpec, 	CDS:ENST00000264907, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000264907, 	DOMAIN_UNK:ENST00000264907, 
0.0002	4553	SRR064441	chimerascan	6	1	17	8	38465446	38465538	79510593	79515484	+	+	RARA	PKIA	38465538	79510593	uc002huk.1|	uc003ybb.2|uc003yba.2|	breast_cancer	SRR064441,	breast_cancer,	3p_KINASE																
0.0002	4554	SRR064441	chimerascan	6	0	7	7	77325213	77326662	77313168	77314643	-	-	BC037783	AF290475	77325213	77314643	uc003ugj.1|	uc003ugk.3|	breast_cancer	SRR064286,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,	NO_KINASE																
0.9960	4555	SRR064441	chimerascan	6	4	3	3	4418014	4508954	37094117	37170640	-	-	SUMF1	LRRFIP2	4418014	37170640	uc011ast.1|uc003bpz.1|uc011ass.1|uc010hby.1|	uc003cgr.2|uc003cgs.3|uc003cgt.3|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000448413,ENST00000272902,	ENST00000421307,ENST00000336686,	InFrame 	1:ENST00000448413,ENST00000272902, 	337:ENST00000448413,ENST00000272902, 	30:ENST00000421307,ENST00000336686, 	721:ENST00000421307,ENST00000336686, 	MAAPALGLVCGRCPELGLVLLLLLLSLLCGAAGSQEAGTGAGAGSLAGSCGCGTPQRPGAHGSSAAAHRYSREANAPGPVPGERQLAHSKMVPIPAGVFTMGTDDPQIKQDGEAPARRVTIDAFYMDAYEVSNTEFEKFVNSTGYLTEAEKFGDSFVFEGMLSEQVKTNIQQAVAAAPWWLPVKGANWRHPEGPDSTILHRPDHPVLHVSWNDAVAYCTWAGKRLPTEAEWEYSCRGGLHNRLFPWGNKLQPKGQHYANIWQGEFPVTNTGEDGFQGTAPVDAFPPNGYGLYNIVGNAWEWTSDWWTVHHSVEETLNPKGPPSGKDRVKKGGSYMCHRAEARLAAKRAARAEARDIRMRELERQQKEYSLHSFDRKWGQIQKWLEDSERARYSHRSSHHRPYLGVEDALSIRSVGSHRYDMFKDRSSRLSSLNHSYSHSHGMKKRSSDSHKDLLSGLYFDQRNYSSLRHSKPTSAYYTRQSSSLYSDPLATYKSDRASPTANSGLLRSASLASLYNGGLYNPYGPRTPSECSYYSSRISSARSSPGFTNDDTASIVSSDRASRGRRESVVSAADYFSRSNRRGSVVSEVDDISIPDLSSLDEKSDKQYAENYTRPSSRNSASATTPLSGNSSRRGSGDTSSLIDPDTSLSELRDIYDLKDQIQDVEGRYMQGLKELKESLSEVEEKYKKAMVSNAQLDNEKNNLIYQVDTLKDVIEEQEEQMAEFYRENEEKSKELERQKHMCSVLQHKMEELKEGLRQRDELIEEKQRMQQKIDTMTKEVFDLQETLLWKDKKIGALEKQKEYIACLRNERDMLREELADLQETVKTGEKHGLVIIPDGTPNGDVSHEPVAGAITVVSQEAAQVLESAGEGPLDVRLRKLAGEKEELLSQIRKLKLQLEEERQKCSRNDGTVGDLAGLQNGSDLQFIEMQRDANRQISEYKFKLSKAEQDITTLEQSISRLEGQVLRYKTAAENAEKVEDELKAEKRKLQRELRTALDKIEEMEMTNSHLAKRLEKMKANRTALLAQQ:ENST00000448413-ENST00000421307,ENST00000448413-ENST00000336686,ENST00000272902-ENST00000421307,ENST00000272902-ENST00000336686, 	8:ENST00000448413,ENST00000272902, 	Intron:ENST00000421307,ENST00000336686, 	CDS:ENST00000448413,ENST00000272902, 	CDS:ENST00000421307,ENST00000336686, 	Domain=FGE-sulfatase;Ontology_term=ECO:0000259;evidence=ECO:0000259|Pfam:PF03781,:ENST00000448413, NO_DOMAIN:ENST00000272902, 	NO_DOMAIN:ENST00000448413, Region=Interaction with sulfatases,:ENST00000272902, 	NO_DOMAIN:ENST00000421307, Region=DVL3-binding,:ENST00000336686, 	NO_DOMAIN:ENST00000421307,ENST00000336686, 
0.0003	4556	SRR064441	chimerascan	5	3	20	20	37591000	37597857	32957200	33099197	+	+	DHX35	Itch,ITCH	37597857	32957200	uc010zwa.1|uc010zwb.1|uc002xjh.2|uc010zwc.1|	uc010zuj.1|uc010geu.1|uc002xak.2|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000252011,	ENST00000262650,	FrameShift 	1:ENST00000252011, 	58:ENST00000252011, 	-1:ENST00000262650, 	-1:ENST00000262650, 	MAAPVGPVKFWRPGTEGPGVSISEERQSLAENSGTTVVYNPYAALSIEQQRQKLPVFKVPCISRWPCGDNALTQGSDSNCENFRFSNLLVVCLTVDHNLVQWVASP*:ENST00000252011-ENST00000262650, 	Intron:ENST00000252011, 	-1:ENST00000262650, 	CDS:ENST00000252011, 	5UTR:ENST00000262650, 	DOMAIN_UNK:ENST00000252011, 	DOMAIN_UNK:ENST00000252011, 	DOMAIN_UNK:ENST00000262650, 	DOMAIN_UNK:ENST00000262650, 
0.0004	4557	SRR064441	chimerascan	5	3	20	20	19780218	19780391	19870210	19983100	+	+	BC090059	RIN2	19780391	19870210	uc002wrm.1|	uc010gcu.1|uc002wro.1|	breast_cancer	SRR064437,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE	UnSpec,	ENST00000255006,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000255006, 	-1:ENST00000255006, 	SPRRAVEPRWGK*:UnSpec-ENST00000255006, 	-1:UnSpec, 	2:ENST00000255006, 	Intergenic:UnSpec, 	CDS:ENST00000255006, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000255006, 	DOMAIN_UNK:ENST00000255006, 
0.9894	4558	SRR064441	chimerascan	5	3	14	14	100002352	100070727	99864084	99880271	-	-	CCDC85C	SETD3	100002352	99880271	uc010avr.2|	uc001ygf.2|uc001ygc.2|uc001ygd.2|uc001ygc.2|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000380243,	ENST00000331768,ENST00000329331,	InFrame 	1:ENST00000380243, 	288:ENST00000380243, 	225:ENST00000331768,ENST00000329331, 	296:ENST00000329331, 594:ENST00000331768, 	MAKPAATAAAASEELSQVPDEELLRWSKEELARRLRRAEGEKVGLMLEHGGLMRDVNRRLQQHLLEIRGLKDVNQRLQDDNQELRELCCFLDDDRQKGRKLAREWQRFGRHAAGAVWHEVARSQQKLRELEARQEALLRENLELKELVLLLDEERAALAATGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGGSPDHHHHVPPPLLPPGPHKAPDGKAGATRRSLDDLSAPPHHRSIPNGLHDPSSTYIRQLESKVRLLEGDKLLAQTHPHANKLPLKDSFTYEDYRWAVSSVMTRQNQIPTEDGSRVTLALIPLWDMCNHTNGLITTGYNLEDDRCECVALQDFRAGEQIYIFYGTRSNAEFVIHSGFFFDNNSHDRVKIKLGVSKSDRLYAMKAEVLARAGIPTSSVFALHFTEPPISAQLLAFLRVFCMTEEELKEHLLGDSAIDRIFTLGNSEFPVSWDNEVKLWTFLEDRASLLLKTYKTTIEEDKSVLKNHDLSVRAKMAIKLRLGEKEILEKAVKSAAVNREYYRQQMEEKAPLPKYEESNLGLLESSVGDSRLPLVLRNLEEEAGVQDALNIREAISKAKATENGLVNGENSIPNGTRSENESLNQESKRAVEDAKGSSSDSTAGVKE:ENST00000380243-ENST00000331768, MAKPAATAAAASEELSQVPDEELLRWSKEELARRLRRAEGEKVGLMLEHGGLMRDVNRRLQQHLLEIRGLKDVNQRLQDDNQELRELCCFLDDDRQKGRKLAREWQRFGRHAAGAVWHEVARSQQKLRELEARQEALLRENLELKELVLLLDEERAALAATGAASGGGGGGGGAGSRSSIDSQASLSGPLSGGAPGAGARDVGDGSSTSSAGSGGSPDHHHHVPPPLLPPGPHKAPDGKAGATRRSLDDLSAPPHHRSIPNGLHDPSSTYIRQLESKVRLLEGDKLLAQTHPHANKLPLKDSFTYEDYRWAVSSVMTRQNQIPTEDGSRVTLALIPLWDMCNHTNGLTPEDSFALAVASA:ENST00000380243-ENST00000329331, 	2:ENST00000380243, 	Intron:ENST00000331768,ENST00000329331, 	CDS:ENST00000380243, 	CDS:ENST00000331768,ENST00000329331, 	NO_DOMAIN:ENST00000380243, 	NO_DOMAIN:ENST00000380243, 	Domain=SET;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00190,:ENST00000331768,ENST00000329331, 	NO_DOMAIN:ENST00000331768,ENST00000329331, 
0.0002	4559	SRR064441	chimerascan	4	1	22	12	42076248	42084913	66516850	66522893	-	-	NHP2L1	TMBIM4	42076248	66522893	uc003bav.2|	uc010ssx.1|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000215956,	UnSpec,	UnSpec 	1:ENST00000215956, 	41:ENST00000215956, 	-1:UnSpec, 	-1:UnSpec, 	MTEADVNPKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANE:ENST00000215956-UnSpec, 	2:ENST00000215956, 	-1:UnSpec, 	CDS:ENST00000215956, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000215956, 	DOMAIN_UNK:ENST00000215956, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4560	SRR064441	chimerascan	4	1	20	12	44483798	44486035	78786	88749	-	+	hNAACTE,ACOT8	DKFZp434K1323	44483798	78786	uc010zxe.1|uc002xqa.1|	uc010sdb.1|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000217455,	UnSpec,	UnSpec 	1:ENST00000217455, 	87:ENST00000217455, 	-1:UnSpec, 	-1:UnSpec, 	MSSPQAPEDGQGCGDRGDPPGDLRSVLVTTVLNLEPLDEDLFRGRHYWVPAKRLFGGQIVGQALVAAAKSVSEDVHVHSLHCYFVRA:ENST00000217455-UnSpec, 	2:ENST00000217455, 	-1:UnSpec, 	CDS:ENST00000217455, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000217455, 	DOMAIN_UNK:ENST00000217455, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4561	SRR064441	chimerascan	4	0	1	1	147931724	147931980	145004781	145005286	-	+	FLJ39739,BC110832	BC065231	147931724	145004781	uc001eqo.1|uc009wjx.1|uc009wjz.1|uc009wjy.1|uc001eql.2|	uc001emi.3|	breast_cancer	SRR064286,SRR064437,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	4562	SRR064441	chimerascan	4	0	8	4	145625382	145628620	103717134	103747793	-	-	CPSF1	UBE2D3	145625382	103747793	uc003zck.1|	uc003hwl.2|uc003hwj.2|uc003hwr.2|uc011ceu.1|uc003hwp.2|uc003hwo.2|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000349769,	ENST00000357194,	FrameShift 	1:ENST00000349769, 	343:ENST00000349769, 	-1:ENST00000357194, 	-1:ENST00000357194, 	MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGKAHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTTGTTAFPLRTQEGVRITLDCAQATFISYDKMVISLKGGERRLCLAELV*:ENST00000349769-ENST00000357194, 	10:ENST00000349769, 	Intron:ENST00000357194, 	CDS:ENST00000349769, 	CDS:ENST00000357194, 	NO_DOMAIN:ENST00000349769, 	NO_DOMAIN:ENST00000349769, 	NO_DOMAIN:ENST00000357194, 	NO_DOMAIN:ENST00000357194, 
0.0002	4563	SRR064441	chimerascan	4	0	6	6	119234460	119256303	119135854	119191359	-	-	MCM9	MCM9	119234460	119191359	uc003pyh.2|	uc011ebm.1|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000316316,ENST00000316068,	ENST00000316316,	FrameShift 	1:ENST00000316316,ENST00000316068, 	343:ENST00000316316,ENST00000316068, 	-1:ENST00000316316, 	-1:ENST00000316316, 	MNSDQVTLVGQVFESYVSEYHKNDILLILKERDEDAHYPVVVNAMTLFETNMEIGEYFNMFPSEVLTIFDSALRRSALTILQSLSQPEAVSMKQNLHARISGLPVCPELVREHIPKTKDVGHFLSVTGTVIRTSLVKVLEFERDYMCNKCKHVFVIKADFEQYYTFCRPSSCPSLESCDSSKFTCLSGLSSSPTRCRDYQEIKIQEQVQRLSVGSIPRSMKVILEDDLVDSCKSGDDLTIYGIVMQRWKPFQQDVRCEVEIVLKANYIQVNNEQSSGIIMDEEVQKEFEDFWEYYKSDPFAGRNVILASLCPQVFGMYLVKLAVAMVLAGGIQRTDATGTRVRFYCC*:ENST00000316068-ENST00000316316,ENST00000316316-ENST00000316316, 	6:ENST00000316316,ENST00000316068, 	Intron:ENST00000316316, 	CDS:ENST00000316316,ENST00000316068, 	CDS:ENST00000316316, 	Domain=MCM,:ENST00000316316,ENST00000316068, 	NO_DOMAIN:ENST00000316316,ENST00000316068, 	NO_DOMAIN:ENST00000316316, 	Domain=MCM,:ENST00000316316, 
0.5414	4564	SRR064441	chimerascan	4	0	8	14	145625382	145628620	24607683	24608175	-	+	CPSF1	PSME1	145625382	24607683	uc003zck.1|	uc001wmh.2|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000349769,	ENST00000206451,ENST00000382708,	InFrame 	1:ENST00000349769, 	343:ENST00000349769, 	195:ENST00000206451,ENST00000382708, 	250:ENST00000382708, 249:ENST00000206451, 	MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGKAHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTTGTTAFPLRTQEGVRITLDCAQATFISYDKMVISLKGGESDYRQLVHELDEAEYRDIRLMVMEIRNAYAVLYDIILKNFEKLKKPRGETKGMIY:ENST00000349769-ENST00000206451, MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGKAHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTTGTTAFPLRTQEGVRITLDCAQATFISYDKMVISLKGGESDYRQLVHELDEAEYRDIRLMVMEIRNAYVRRQGQGRGGQRQLSQATHSLTLQARG:ENST00000349769-ENST00000382708, 	10:ENST00000349769, 	10:ENST00000206451,ENST00000382708, 	CDS:ENST00000349769, 	CDS:ENST00000206451,ENST00000382708, 	NO_DOMAIN:ENST00000349769, 	NO_DOMAIN:ENST00000349769, 	NO_DOMAIN:ENST00000206451,ENST00000382708, 	NO_DOMAIN:ENST00000206451,ENST00000382708, 
0.0002	4565	SRR064441	chimerascan	4	0	1	1	143744201	143744587	145004781	145005286	-	+	FLJ39739	BC065231	143744201	145004781	uc009whx.2|uc001ejr.3|uc001ejp.3|uc009why.2|	uc001emi.3|	breast_cancer	SRR064286,SRR064437,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	4566	SRR064441	chimerascan	4	0	1	1	149576453	149576700	145004781	145005286	+	+	BC110832,LOC728855	BC065231	149576700	145004781	uc001esk.3|uc009wlc.2|uc009wld.2|uc009wlb.1|uc001esl.3|	uc001emi.3|	breast_cancer	SRR064286,SRR064437,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	4567	SRR064441	chimerascan	4	0	1	1	144340526	144340773	145004781	145005286	-	+	LOC728855	BC065231	144340526	145004781	uc001ekv.2|uc001ekr.3|uc001ekt.3|	uc001emi.3|	breast_cancer	SRR064286,SRR064437,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	4568	SRR064441	chimerascan	4	0	M	M	10579	12138	1709	4262	+	+	STRF6	TVAS5	12138	1709	uc004cov.3|	uc004cos.3|	breast_cancer	SRR064439,SRR064441,	breast_cancer,	NO_KINASE																
0.0003	4569	SRR064441	chimerascan	3	2	8	8	124084920	124096580	81550769	81733850	+	-	WDR67	ZNF704	124096580	81733850	uc003ypp.1|uc011lih.1|uc011lig.1|uc003ypq.1|uc003ypo.1|	uc003yby.1|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000287380,	ENST00000327835,	FrameShift 	1:ENST00000287380, 	173:ENST00000287380, 	-1:ENST00000327835, 	-1:ENST00000327835, 	MQSTDLGNKESGKIWHRKPSPATRDGIIVNIIHNTSDYHPKVLRFLNVAFDGTGDCLIAGDHQGNIYVFDLHGNRFNLVQRTAQACTALAFNLRRKSEFLVALADYSIKCFDTVTKELVSWMRGHESSVFSISVHASGKYAITTSSDTAQLWDLDTFQRKRKLNIRQSVGIQKGWGALSGK*:ENST00000287380-ENST00000327835, 	Intron:ENST00000287380, 	-1:ENST00000327835, 	CDS:ENST00000287380, 	5UTR:ENST00000327835, 	DOMAIN_UNK:ENST00000287380, 	DOMAIN_UNK:ENST00000287380, 	DOMAIN_UNK:ENST00000327835, 	DOMAIN_UNK:ENST00000327835, 
0.0002	4570	SRR064441	chimerascan	3	2	17	17	17716682	17721688	17714665	17715370	-	-	SREBF1	SREBP-1	17716682	17715370	uc002grt.1|uc002grs.1|uc002grq.1|uc002grp.1|uc002gru.1|uc002grr.1|uc002grq.1|uc002grs.1|uc002grr.1|uc002gru.1|uc002grt.1|uc002grp.1|	uc002gro.3|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000261646,	UnSpec,	UnSpec 	1:ENST00000261646, 	1071:ENST00000261646, 	-1:UnSpec, 	-1:UnSpec, 	MDEPPFSEAALEQALGEPCDLDAALLTDIEDMLQLINNQDSDFPGLFDPPYAGSGAGGTDPASPDTSSPGSLSPPPATLSSSLEAFLSGPQAAPSPLSPPQPAPTPLKMYPSMPAFSPGPGIKEESVPLSILQTPTPQPLPGALLPQSFPAPAPPQFSSTPVLGYPSPPGGFSTGSPPGNTQQPLPGLPLASPPGVPPVSLHTQVQSVVPQQLLTVTAAPTAAPVTTTVTSQIQQVPVLLQPHFIKADSLLLTAMKTDGATVKAAGLSPLVSGTTVQTGPLPTLVSGGTILATVPLVVDAEKLPINRLAAGSKAPASAQSRGEKRTAHNAIEKRYRSSINDKIIELKDLVVGTEAKLNKSAVLRKAIDYIRFLQHSNQKLKQENLSLRTAVHKSKSLKDLVSACGSGGNTDVLMEGVKTEVEDTLTPPPSDAGSPFQSSPLSLGSRGSGSGGSGSDSEPDSPVFEDSKAKPEQRPSLHSRGMLDRSRLALCTLVFLCLSCNPLASLLGARGLPSPSDTTSVYHSPGRNVLGTESRDGPGWAQWLLPPVVWLLNGLLVLVSLVLLFVYGEPVTRPHSGPAVYFWRHRKQADLDLARGDFAQAAQQLWLALRALGRPLPTSHLDLACSLLWNLIRHLLQRLWVGRWLAGRAGGLQQDCALRVDASASARDAALVYHKLHQLHTMGKHTGGHLTATNLALSALNLAECAGDAVSVATLAEIYVAAALRVKTSLPRALHFLTRFFLSSARQACLAQSGSVPPAMQWLCHPVGHRFFVDGDWSVLSTPWESLYSLAGNPVDPLAQVTQLFREHLLERALNCVTQPNPSPGSADGDKEFSDALGYLQLLNSCSDAAGAPAYSFSISSSMATTTGVDPVAKWWASLTAVVIHWLRRDEEAAERLCPLVEHLPRVLQESERPLPRAALHSFKAARALLGCAKAESGPASLTICEKASGYLQDSLATTPASSSIDKAVQLFLCDLLLVVRTSLWRQQQPPAPAPAAQGTSSRPQASALELRGFQRDLSSLRRLAQSFRPAMRRVFLHEATARLMAGASPTRTHQLLDRSLRRRAGPGGKG:ENST00000261646-UnSpec, 	18:ENST00000261646, 	-1:UnSpec, 	CDS:ENST00000261646, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000261646, 	DOMAIN_UNK:ENST00000261646, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4571	SRR064441	chimerascan	3	2	1	1	143915748	143916308	206557369	206628046	+	+	RP3-365I19.1-001	SRGAP2	143916308	206557369	uc010oxm.1|	uc010prv.1|	breast_cancer	SRR064437,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	4572	SRR064441	chimerascan	3	1	14	8	50234787	50249312	121547986	121561198	+	-	KLHDC2	SNTB1	50249312	121561198	uc001wwx.2|	uc010mdg.2|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000298307,	ENST00000395601,ENST00000517992,	FrameShift 	1:ENST00000298307, 	366:ENST00000298307, 	-1:ENST00000395601,ENST00000517992, 	-1:ENST00000395601,ENST00000517992, 	MADGNEDLRADDLPGPAFESYESMELACPAERSGHVAVSDGRHMFVWGGYKSNQVRGLYDFYLPREELWIYNMETGRWKKINTEGDVPPSMSGSCAVCVDRVLYLFGGHHSRGNTNKFYMLDSRSTDRVLQWERIDCQGIPPSSKDKLGVWVYKNKLIFFGGYGYLPEDKVLGTFEFDETSFWNSSHPRGWNDHVHILDTETFTWSQPITTGKAPSPRAAHACATVGNRGFVFGGRYRDARMNDLHYLNLDTWEWNELIPQGICPVGRSWHSLTPVSSDHLFLFGGFTTDKQPLSDAWTYCISKNEWIQFNHPYTEKPRLWHTACASDEGEVIVFGGCANNLLVHHRAAHSNEILIFSVQPKSLVRGWSIQVQERDHPRLVWICPLQRELVPGKGLKHISSEQRPAGTSPTGQGA*:ENST00000298307-ENST00000517992,ENST00000298307-ENST00000395601, 	Intron:ENST00000298307, 	Intron:ENST00000395601,ENST00000517992, 	CDS:ENST00000298307, 	CDS:ENST00000395601,ENST00000517992, 	Repeat=Kelch 1,Repeat=Kelch 2,Repeat=Kelch 3,Repeat=Kelch 4,Repeat=Kelch 5,Repeat=Kelch 6,:ENST00000298307, 	NO_DOMAIN:ENST00000298307, 	NO_DOMAIN:ENST00000395601,ENST00000517992, 	Domain=PH 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00145,Domain=PDZ;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=PH 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00145,Domain=SU,Region=Calmodulin-binding;Ontology_term=ECO:0000250;evidence=ECO:0000250,:ENST00000395601,ENST00000517992, 
0.9894	4573	SRR064441	chimerascan	3	1	1	1	153934696	153935789	153920154	153927642	-	-	SLC39A1	CRTC2	153934696	153927642	uc001fdj.2|uc001fdl.2|uc001fdk.2|uc001fdh.2|uc001fdi.2|	uc010ped.1|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000368623,ENST00000310483,ENST00000368621,ENST00000356205,	ENST00000368633,ENST00000303569,	InFrame 	1:ENST00000368623,ENST00000310483,ENST00000368621,ENST00000356205, 	105:ENST00000368623,ENST00000310483,ENST00000368621,ENST00000356205, 	51:ENST00000368633,ENST00000303569, 	693:ENST00000368633,ENST00000303569, 	MGPWGEPELLVWRPEAVASEPPVPVGLEVKLGALVLLLVLTLLCSLVPICVLRRPGANHEGSASRQKALSLVSCFAGGVFLATCLLDLLPDYLAAIDEALAALHVTLQAQKLRLAYTRSSHYGGSLPNVNQIGSGLAEFQSPLHSPLDSSRSTRHHGLVERVQRDPRRMVSPLRRYTRHIDSSPYSPAYLSPPPESSWRRTMAWGNFPAEKGQLFRLPSALNRTSSDSALHTSVMNPSPQDTYPGPTPPSILPSRRGGILDGEMDPKVPAIEENLLDDKHLLKPWDAKKLSSSSSRPRSCEVPGINIFPSPDQPANVPVLPPAMNTGGSLPDLTNLHFPPPLPTPLDPEETAYPSLSGGNSTSNLTHTMTHLGISRGMGLGPGYDAPGLHSPLSHPSLQSSLSNPNLQASLSSPQPQLQGSHSHPSLPASSLARHVLPTTSLGHPSLSAPALSSSSSSSSTSSPVLGAPSYPASTPGASPHHRRVPLSPLSLLAGPADARRSQQQLPKQFSPTMSPTLSSITQGVPLDTSKLSTDQRLPPYPYSSPSLVLPTQPHTPKSLQQPGLPSQSCSVQSSGGQPPGRQSHYGTPYPPGPSGHGQQSYHRPMSDFNLGNLEQFSMESPSASLVLDPPGFSEGPGFLGGEGPMGGPQDPHTFNHQNLTHCSRHGSGPNIILTGDSSPGFSKEIAAALAGVPGFEVSAAGLELGLGLEDELRMEPLGLEGLNMLSDPCALLPDPAVEESFRSDRLQ:ENST00000368621-ENST00000303569,ENST00000356205-ENST00000368633,ENST00000310483-ENST00000368633,ENST00000368623-ENST00000368633,ENST00000310483-ENST00000303569,ENST00000368623-ENST00000303569,ENST00000368621-ENST00000368633,ENST00000356205-ENST00000303569, 	4:ENST00000310483, 3:ENST00000368621,ENST00000356205, 2:ENST00000368623, 	Intron:ENST00000368633,ENST00000303569, 	CDS:ENST00000368623,ENST00000310483,ENST00000368621,ENST00000356205, 	CDS:ENST00000368633,ENST00000303569, 	Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,:ENST00000368623,ENST00000310483,ENST00000368621,ENST00000356205, 	Region=Heavy metals binding;Ontology_term=ECO:0000250;evidence=ECO:0000250,:ENST00000368623,ENST00000310483,ENST00000368621,ENST00000356205, 	Domain=TORC_N;Ontology_term=ECO:0000259;evidence=ECO:0000259|Pfam:PF12884,:ENST00000303569, NO_DOMAIN:ENST00000368633, 	NO_DOMAIN:ENST00000368633,ENST00000303569, 
0.0002	4574	SRR064441	chimerascan	3	0	1	1	241803184	241803701	241792169	241799232	-	-	OPN3	CHML	241803184	241799232	uc001hza.2|uc001hzc.2|	uc001hzd.2|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000331838,	UnSpec,	UnSpec 	1:ENST00000331838, 	124:ENST00000331838, 	-1:UnSpec, 	-1:UnSpec, 	MYSGNRSGGHGYWDGGGAAGAEGPAPAGTLSPAPLFSPGTYERLALLLGSIGLLGVGNNLLVLVLYYKFQRLRTPTHLLLVNISLSDLLVSLFGVTFTFVSCLRNGWVWDTVGCVWDGFSGSLF:ENST00000331838-UnSpec, 	1:ENST00000331838, 	-1:UnSpec, 	CDS:ENST00000331838, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000331838, 	DOMAIN_UNK:ENST00000331838, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4575	SRR064441	chimerascan	3	0	Un_gl000220	22	112025	156152	35777087	35790194	+	+	LOC100008587	HMOX1	156152	35777087	uc011mft.1|	uc003ant.1|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0003	4576	SRR064441	chimerascan	3	0	2	2	10262735	10269281	10281981	10351856	+	+	RRM2	C2orf48	10269281	10281981	uc002rah.2|	uc002rai.1|	breast_cancer	SRR064438,SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000304567,	ENST00000381786,	FrameShift 	1:ENST00000304567, 	339:ENST00000304567, 	-1:ENST00000381786, 	-1:ENST00000381786, 	MLSLRVPLAPITDPQQLQLSPLKGLSLVDKENTPPALSGTRVLASKTARRIFQEPTEPKTKAAAPGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVLGDREVQSRWSPGPRGDSTPVREMETNHPPSVRG*:ENST00000304567-ENST00000381786, 	Intron:ENST00000304567, 	-1:ENST00000381786, 	CDS:ENST00000304567, 	5UTR:ENST00000381786, 	DOMAIN_UNK:ENST00000304567, 	DOMAIN_UNK:ENST00000304567, 	DOMAIN_UNK:ENST00000381786, 	DOMAIN_UNK:ENST00000381786, 
0.0105	4577	SRR064441	chimerascan	3	0	8	3	145625382	145628620	184025145	184026840	-	+	CPSF1	PSMD2	145625382	184025145	uc003zck.1|	uc011brk.1|uc003fnn.1|uc011brj.1|	breast_cancer	SRR064439,SRR064441,	breast_cancer,	NO_KINASE	ENST00000349769,	ENST00000310118,	InFrame 	1:ENST00000349769, 	343:ENST00000349769, 	679:ENST00000310118, 	908:ENST00000310118, 	MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGKAHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTTGTTAFPLRTQEGVRITLDCAQATFISYDKMVISLKGGEMRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPEVSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVILRKNPNYDL:ENST00000349769-ENST00000310118, 	10:ENST00000349769, 	17:ENST00000310118, 	CDS:ENST00000349769, 	CDS:ENST00000310118, 	NO_DOMAIN:ENST00000349769, 	NO_DOMAIN:ENST00000349769, 	Repeat=PC 6,Repeat=PC 7,:ENST00000310118, 	Repeat=PC 1,Repeat=PC 2,Repeat=PC 3,Repeat=PC 4,Repeat=PC 5,:ENST00000310118, 
0.9894	4578	SRR064441	chimerascan	3	0	19	16	10946685	10946983	31202284	31203097	-	+	TMED1	FUS/CHOP,FUS	10946685	31202284	uc002mpy.2|	uc002ebi.2|uc002ebg.2|uc002ebh.2|uc002ebj.2|uc002ebf.2|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000214869,	ENST00000254108,	InFrame 	1:ENST00000214869, 	60:ENST00000214869, 	465:ENST00000254108, 	526:ENST00000254108, 	MMAAGAALALALWLLMPPVEVGGAGPPPIQDGEFTFLLPAGRKQCFYQSAPANASLETEYQGNYGDDRRGGRGGYDRGGYRGRGGDRGGFRGGRGGGDRGGFGPGKMDSRGEHRQDRRERPY:ENST00000214869-ENST00000254108, 	1:ENST00000214869, 	14:ENST00000254108, 	CDS:ENST00000214869, 	CDS:ENST00000254108, 	Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=GOLD;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00096,:ENST00000214869, 	Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,:ENST00000214869, 	NO_DOMAIN:ENST00000254108, 	Domain=RRM;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00176,:ENST00000254108, 
0.0003	4579	SRR064441	chimerascan	2	2	20	20	62496590	62505169	62559688	62565394	+	+	TPD52L2	DNAJC5,FLJ00118	62505169	62559688	uc002yha.2|uc002ygy.2|uc002ygz.2|uc002yhd.2|uc011abl.1|uc002yhb.2|uc002yhc.2|	uc002yhf.2|uc002yhg.1|uc002yhh.2|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000217121,	ENST00000360864,	FrameShift 	1:ENST00000217121, 	105:ENST00000217121, 	-1:ENST00000360864, 	-1:ENST00000360864, 	MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAARTPAVEGLTEAEEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSSAIA*:ENST00000217121-ENST00000360864, 	Intron:ENST00000217121, 	-1:ENST00000360864, 	CDS:ENST00000217121, 	5UTR:ENST00000360864, 	DOMAIN_UNK:ENST00000217121, 	DOMAIN_UNK:ENST00000217121, 	DOMAIN_UNK:ENST00000360864, 	DOMAIN_UNK:ENST00000360864, 
0.0002	4580	SRR064441	chimerascan	2	2	9	9	136210980	136214972	136197553	136201437	-	-	MED22	SURF6	136210980	136201437	uc004cdc.2|	uc004cdb.3|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000491289,ENST00000476080,ENST00000344469,ENST00000343730,ENST00000486395,	ENST00000372022,	FrameShift 	1:ENST00000491289,ENST00000476080,ENST00000344469,ENST00000343730,ENST00000486395, 	137:ENST00000491289,ENST00000476080,ENST00000344469,ENST00000343730,ENST00000486395, 	-1:ENST00000372022, 	-1:ENST00000372022, 	MAQQRALPQSKETLLQSYNKRLKDDIKSIMDNFTEIIKTAKIEDETQVSRATQGEQDNYEMHVRAANIVRAGESLMKLVSDLKQFLILNDFPSVNEAIDQRNQQLRTLQEECDRKLITLRDEISIDLYELEEEYYSSSWQNSRLRNCRAPKKEKEENTKEIPEARREGC*:ENST00000343730-ENST00000372022,ENST00000486395-ENST00000372022,ENST00000491289-ENST00000372022,ENST00000476080-ENST00000372022,ENST00000344469-ENST00000372022, 	4:ENST00000491289,ENST00000476080,ENST00000344469,ENST00000343730,ENST00000486395, 	Intron:ENST00000372022, 	CDS:ENST00000491289,ENST00000476080,ENST00000344469,ENST00000343730,ENST00000486395, 	CDS:ENST00000372022, 	NO_DOMAIN:ENST00000491289,ENST00000476080,ENST00000344469,ENST00000343730,ENST00000486395, 	NO_DOMAIN:ENST00000491289,ENST00000476080,ENST00000344469,ENST00000343730,ENST00000486395, 	NO_DOMAIN:ENST00000372022, 	NO_DOMAIN:ENST00000372022, 
0.0002	4581	SRR064441	chimerascan	2	1	5	5	69697280	69697495	68860927	68876221	+	+	SMA4	GTF2H2,GTF2H2D,GTF2H2C	69697495	68860927	uc011cro.1|	uc003jwz.3|uc003jww.1|uc003jwx.3|uc011cre.1|uc003jwy.3|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	4582	SRR064441	chimerascan	2	1	5	5	69697280	69697495	69716076	69720974	+	+	SMA4	GTF2H2B,GTF2H2,GTF2H2C	69697495	69716076	uc011cro.1|	uc003jza.3|uc011crp.1|uc003jzb.3|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	4583	SRR064441	chimerascan	2	1	5	5	69697280	69697495	70330953	70358623	+	-	SMA4	GTF2H2	69697495	70358623	uc011cro.1|	uc011crt.1|uc003kaz.2|uc003kay.1|uc003kau.3|uc003kav.3|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	4584	SRR064441	chimerascan	3	0	19	19	39805995	39811489	39797457	39805976	-	-	BC110060	LRFN1	39805995	39805976	uc010egm.1|	uc002okw.2|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	4585	SRR064441	chimerascan	2	0	9	M	19378359	19379616	1709	4262	-	+	RPS6	TVAS5	19378359	1709	uc003znw.1|	uc004cos.3|	breast_cancer	SRR064438,SRR064441,	breast_cancer,	NO_KINASE	ENST00000315377,	UnSpec,	UnSpec 	1:ENST00000315377, 	136:ENST00000315377, 	-1:UnSpec, 	-1:UnSpec, 	MATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPLNKEGR:ENST00000315377-UnSpec, 	Intron:ENST00000315377, 	-1:UnSpec, 	CDS:ENST00000315377, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000315377, 	DOMAIN_UNK:ENST00000315377, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4586	SRR064441	chimerascan	2	0	12	M	52626954	52642709	1709	4262	+	+	KRT7	TVAS5	52642709	1709	uc001saa.1|	uc004cos.3|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0001	4587	SRR064441	chimerascan	2	0	20	20	47364346	47444420	34213968	34215335	-	-	PREX1	CPNE1	47364346	34215335	uc002xtw.1|	uc002xdc.2|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000396220,ENST00000371941,	ENST00000397443,ENST00000317677,ENST00000397442,ENST00000397445,ENST00000317619,ENST00000349942,ENST00000401607,ENST00000402424,ENST00000397446,ENST00000352393,	FrameShift 	1:ENST00000396220,ENST00000371941, 	96:ENST00000396220,ENST00000371941, 	-1:ENST00000397443,ENST00000317677,ENST00000397442,ENST00000397445,ENST00000317619,ENST00000349942,ENST00000401607,ENST00000402424,ENST00000397446,ENST00000352393, 	-1:ENST00000397443,ENST00000317677,ENST00000397442,ENST00000397445,ENST00000317619,ENST00000349942,ENST00000401607,ENST00000402424,ENST00000397446,ENST00000352393, 	MEAPSGSEPGGDGAGDCAHPDPRAPGAAAPSSGPGPCAAARESERQLRLRLCVLNEILGTERDYVGTLRFLQSAFLHRIRQNVADSVEKGLTEENVKASRALWMPTAKPCPKFASMALPTLHPSSTMWPGLQPRLHIRGLPRNTSCCCC*:ENST00000396220-ENST00000317619,ENST00000396220-ENST00000397442,ENST00000371941-ENST00000402424,ENST00000371941-ENST00000397442,ENST00000396220-ENST00000352393,ENST00000396220-ENST00000402424,ENST00000396220-ENST00000397443,ENST00000371941-ENST00000397445,ENST00000371941-ENST00000397446,ENST00000371941-ENST00000349942,ENST00000371941-ENST00000352393,ENST00000396220-ENST00000349942,ENST00000396220-ENST00000397445,ENST00000371941-ENST00000317619,ENST00000396220-ENST00000397446,ENST00000371941-ENST00000397443,ENST00000371941-ENST00000317677,ENST00000396220-ENST00000317677, MEAPSGSEPGGDGAGDCAHPDPRAPGAAAPSSGPGPCAAARESERQLRLRLCVLNEILGTERDYVGTLRFLQSAFLHRIRQNVADSVEKGLTEENVKASRALWMPTAKPCPKFASMALPTLHPSSTMWPGLQPRLHIRGLPRT*:ENST00000396220-ENST00000401607,ENST00000371941-ENST00000401607, 	2:ENST00000396220,ENST00000371941, 	Intron:ENST00000397443,ENST00000317677,ENST00000397442,ENST00000397445,ENST00000317619,ENST00000349942,ENST00000401607,ENST00000402424,ENST00000397446,ENST00000352393, 	CDS:ENST00000396220,ENST00000371941, 	CDS:ENST00000397443,ENST00000317677,ENST00000397442,ENST00000397445,ENST00000317619,ENST00000349942,ENST00000401607,ENST00000402424,ENST00000397446,ENST00000352393, 	Domain=DH;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00062,:ENST00000371941, NO_DOMAIN:ENST00000396220, 	Domain=PH;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00145,Domain=DEP 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00066,Domain=DEP 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00066,Domain=PDZ;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,:ENST00000371941, NO_DOMAIN:ENST00000396220, 	NO_DOMAIN:ENST00000397443,ENST00000317677,ENST00000397442,ENST00000397445,ENST00000317619,ENST00000349942,ENST00000401607,ENST00000402424,ENST00000397446,ENST00000352393, 	Domain=C2 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00041,Domain=C2 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00041,Domain=VWFA;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00219,:ENST00000397443,ENST00000352393, Domain=C2;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50004,:ENST00000401607,ENST00000317677,ENST00000397442, NO_DOMAIN:ENST00000349942,ENST00000317619,ENST00000402424,ENST00000397446,ENST00000397445, 
0.9894	4588	SRR064441	chimerascan	2	0	16	14	2034150	2034477	65412532	65417132	+	-	GFER	RAB15	2034477	65417132	uc002cob.2|	uc001xhz.2|uc010aqk.2|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000248114,	ENST00000267512,	InFrame 	1:ENST00000248114, 	86:ENST00000248114, 	152:ENST00000267512, 	208:ENST00000267512, 	MAAPGERGRFHGGNLFFLPGGARSEMMDDLATDARGRGAGRRDAAASASTPAQAPTSDSPVAEDASRRRPCRACVDFKTWMRTQQKGTHQKASRRSLLGIRLMRSRNGRWEESKGSSWRRSMAWTSMKQVPAPTSTLKSHSRV:ENST00000248114-ENST00000267512, 	Intron:ENST00000248114, 	Intron:ENST00000267512, 	CDS:ENST00000248114, 	CDS:ENST00000267512, 	NO_DOMAIN:ENST00000248114, 	Domain=ERV/ALR sulfhydryl oxidase;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00654,:ENST00000248114, 	NO_DOMAIN:ENST00000267512, 	NO_DOMAIN:ENST00000267512, 
0.0002	4589	SRR064441	chimerascan	2	0	19	M	1438363	1440492	1709	4262	+	+	RPS15	TVAS5	1440492	1709	uc002lsq.1|uc002lsp.1|	uc004cos.3|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.1392	4590	SRR064441	chimerascan	2	0	12	17	50677203	50677353	26941459	26971205	-	-	LIMA1	KIAA0100	50677203	26971205	uc010sms.1|uc010smr.1|uc001rwj.3|uc001rwk.3|	uc002hbv.2|uc010crr.1|uc002hbu.2|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000341247,	ENST00000005905,	FrameShift 	-1:ENST00000341247, 	-1:ENST00000341247, 	-1:ENST00000005905, 	-1:ENST00000005905, 	MSVLSFSNTSKQWKLITCGFPANSLAMIFHTMWHCALEKCVSERTYRKFLTCLPHSPRALGWIKRNCPSAHPY*:ENST00000341247-ENST00000005905, 	1:ENST00000341247, 	Intron:ENST00000005905, 	5UTR:ENST00000341247, 	CDS:ENST00000005905, 	DOMAIN_UNK:ENST00000341247, 	DOMAIN_UNK:ENST00000341247, 	NO_DOMAIN:ENST00000005905, 	NO_DOMAIN:ENST00000005905, 
0.0002	4591	SRR064441	chimerascan	2	0	17	17	76000251	76000291	76008084	76027923	+	+	septin_9/TNRC6C_fusion	TNRC6C	76000291	76008084	uc010wto.1|	uc002juc.2|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.1103	4592	SRR064441	chimerascan	2	0	5	6	180326077	180374755	34212608	34214007	+	+	BTNL8	HMGA1	180374755	34212608	uc010jll.2|	uc011dsp.1|uc003oiu.2|uc011dso.1|uc003oiy.2|uc003oiw.2|uc003ojd.2|uc003ojc.2|uc003oja.2|uc003oiv.2|uc010jvl.2|uc003oiz.2|uc003oit.2|uc003oix.2|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000508408,ENST00000231229,ENST00000340184,	ENST00000374117,	InFrame 	1:ENST00000508408,ENST00000231229,ENST00000340184, 	306:ENST00000508408,ENST00000231229,ENST00000340184, 	68:ENST00000374117, 	179:ENST00000374117, 	MALMLSLVLSLLKLGSGQWQVFGPDKPVQALVGEDAAFSCFLSPKTNAEAMEVRFFRGQFSSVVHLYRDGKDQPFMQMPQYQGRTKLVKDSIAEGRISLRLENITVLDAGLYGCRISSQSYYQKAIWELQVSALGSVPLISITGYVDRDIQLLCQSSGWFPRPTAKWKGPQGQDLSTDSRTNRDMHGLFDVEISLTVQENAGSISCSMRHAHLSREVESRVQIGDTFFEPISWHLATKVLGILCCGLFFGIVGLKIFFSKFQCKREREAWAGALFMVPAGTGSEMLPHPAASLLLVLASRGPGPKKRRRKRRASRRSPRRRSSDPCVPPAPHWRSSFLLGLDSFAPLPPPPPLPQAHHHHRLWPPPPSSTCALTTTLHSTPAAAGLPWAEWGAVFPWPQFPAPPAHPRIHTCPPGQG:ENST00000231229-ENST00000374117,ENST00000508408-ENST00000374117,ENST00000340184-ENST00000374117, 	Intron:ENST00000508408,ENST00000231229,ENST00000340184, 	5:ENST00000374117, 	CDS:ENST00000508408,ENST00000231229,ENST00000340184, 	CDS:ENST00000374117, 	Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=Ig-like V-type 1,Domain=Ig-like V-type 2,Domain=B30.2/SPRY;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00548,:ENST00000508408,ENST00000231229,ENST00000340184, 	NO_DOMAIN:ENST00000508408,ENST00000231229,ENST00000340184, 	NO_DOMAIN:ENST00000374117, 	NO_DOMAIN:ENST00000374117, 
0.0004	4593	SRR064441	chimerascan	2	0	11	14	133826586	133826880	35522484	35552587	-	+	IGSF9B	FAM177A1	133826586	35522484	uc001qgx.3|	uc001wsp.2|uc001wsq.2|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000321016,	ENST00000280987,ENST00000396472,ENST00000382406,	FrameShift 	1:ENST00000321016, 	21:ENST00000321016, 	-1:ENST00000280987,ENST00000396472,ENST00000382406, 	-1:ENST00000280987,ENST00000396472,ENST00000382406, 	MIWYVATFIASVIGTRGLAAE*:ENST00000321016-ENST00000382406,ENST00000321016-ENST00000396472,ENST00000321016-ENST00000280987, 	1:ENST00000321016, 	4:ENST00000396472, 3:ENST00000382406, 2:ENST00000280987, 	CDS:ENST00000321016, 	CDS:ENST00000280987,ENST00000396472,ENST00000382406, 	Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,:ENST00000321016, 	Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=Ig-like 1,Domain=Ig-like 2,Domain=Ig-like 3,Domain=Ig-like 4,Domain=Ig-like 5,Domain=Fibronectin type-III 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00316,Domain=Fibronectin type-III 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00316,:ENST00000321016, 	NO_DOMAIN:ENST00000280987,ENST00000396472,ENST00000382406, 	NO_DOMAIN:ENST00000280987,ENST00000396472,ENST00000382406, 
0.0002	4594	SRR064441	chimerascan	2	0	17_ctg5_hap1	17	266212	347238	45099216	45105726	-	+	NSF	LRRC37A2	266212	45099216	uc010wwm.1|uc010wwo.1|uc010wwn.1|uc010wwl.1|	uc010wki.1|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	4595	SRR064441	chimerascan	2	0	1	11	6484848	6500500	130096576	130184607	+	-	ESPN	ZBTB44	6500500	130184607	uc001amy.2|	uc001qfx.2|uc001qga.2|uc001qgb.3|uc001qgc.1|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000377828,	UnSpec,	UnSpec 	1:ENST00000377828, 	225:ENST00000377828, 	-1:UnSpec, 	-1:UnSpec, 	MALEQALQAARQGELDVLRSLHAAGLLGPSLRDPLDALPVHHAARAGKLHCLRFLVEEAALPAAARARNGATPAHDASATGHLACLQWLLSQGGCRVQDKDNSGATVLHLAARFGHPEVVNWLLHHGGGDPTAATDMGALPIHYAAAKGDFPSLRLLVEHYPEGVNAQTKNGATPLYLACQEGHLEVTQYLVQECGADPHARAHDGMTPLHAAAQMGHSPVIVWL:ENST00000377828-UnSpec, 	Intron:ENST00000377828, 	-1:UnSpec, 	CDS:ENST00000377828, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000377828, 	DOMAIN_UNK:ENST00000377828, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4596	SRR064441	chimerascan	2	0	M	M	12338	14645	8664	9990	+	+	MTND5	OK/SW-cl.16	14645	8664	uc004cox.3|	uc011mfi.1|	breast_cancer	SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,	NO_KINASE																
0.0002	4597	SRR064441	chimerascan	2	0	3	M	23958639	23960054	1709	4262	+	+	EC45	TVAS5	23960054	1709	uc011awj.1|	uc004cos.3|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0001	4598	SRR064441	chimerascan	2	0	X	16	70503042	70503571	72816788	72822747	+	-	NONO	ZFHX3	70503571	72822747	uc004dzp.2|uc004dzo.2|uc004dzn.2|uc011mpv.1|	uc002fcl.2|uc002fck.2|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000276079,	UnSpec,	UnSpec 	0:ENST00000276079, 	0:ENST00000276079, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000276079-UnSpec, 	Intron:ENST00000276079, 	Intron:UnSpec, 	5UTR:ENST00000276079, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000276079, 	DOMAIN_UNK:ENST00000276079, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4599	SRR064441	chimerascan	2	0	M	M	5855	7427	1709	4262	+	+	BC018860	TVAS5	7427	1709	uc011mfh.1|	uc004cos.3|	breast_cancer	SRR064439,SRR064441,	breast_cancer,	NO_KINASE																
0.0002	4600	SRR064441	chimerascan	2	0	17_ctg5_hap1	17	266212	347238	62850488	62888718	-	-	NSF	LRRC37A3	266212	62888718	uc010wwm.1|uc010wwo.1|uc010wwn.1|uc010wwl.1|	uc002jey.2|uc010wqf.1|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000319651,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000319651, 	-1:ENST00000319651, 	EISKETIFLTLMEMYGKHTVGPRN*:UnSpec-ENST00000319651, 	-1:UnSpec, 	Intron:ENST00000319651, 	Intergenic:UnSpec, 	CDS:ENST00000319651, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000319651, 	DOMAIN_UNK:ENST00000319651, 
0.0002	4601	SRR064441	chimerascan	2	0	1	11	17034387	17046652	130096576	130184607	-	-	ESPNP,ESPN	ZBTB44	17034387	130184607	uc001azn.1|uc010ocj.1|	uc001qfx.2|uc001qga.2|uc001qgb.3|uc001qgc.1|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	4602	SRR064441	chimerascan	2	0	M	M	12338	14645	1709	4262	+	+	MTND5	TVAS5	14645	1709	uc004cox.3|	uc004cos.3|	breast_cancer	SRR064286,SRR064438,SRR064439,SRR064440,SRR064441,	breast_cancer,	NO_KINASE																
0.0002	4603	SRR064441	chimerascan	2	0	3	7	128968453	128991258	130146080	130148503	+	-	COPG	COPG2	128991258	130148503	uc010htb.2|uc003els.2|	uc003vqh.1|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000314797,	UnSpec,	UnSpec 	1:ENST00000314797, 	719:ENST00000314797, 	-1:UnSpec, 	-1:UnSpec, 	MLKKFDKKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEHLGTTEATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNYRGPAVRALCQITDSTMLQAIERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVKRWVNEAQEAASSDNIMVQYHALGLLYHVRKNDRLAVNKMISKVTRHGLKSPFAYCMMIRVASKQLEEEDGSRDSPLFDFIESCLRNKHEMVVYEAASAIVNLPGCSAKELAPAVSVLQLFCSSPKAALRYAAVRTLNKVAMKHPSAVTACNLDLENLVTDSNRSIATLAITTLLKTGSESSIDRLMKQISSFMSEISDEFKVVVVQAISALCQKYPRKHAVLMNFLFTMLREEGGFEYKRAIVDCIISIIEENSESKETGLSHLCEFIEDCEFTVLATRILHLLGQEGPKTTNPSKYIRFIYNRVVLEHEEVRAGAVSALAKFGAQNEEMLPSILVLLKRCVMDDDNEVRDRATFYLNVLEQKQKALNAGYILNGLTVSIPGLERALQQYTLEPSEKPFDLKSVPLATAPMAEQRTESTPITAVKQPEKVAATRQEIFQEQLAAVPEFRGLGPLFKSSPEPVALTESETEYVIRCTKHTFTNHMVFQFDCTNTLNDQTLENVTVQMEPTEAYEVLCYVPARSLPYNQPGTCYTLVALPKEDPTA:ENST00000314797-UnSpec, 	Intron:ENST00000314797, 	-1:UnSpec, 	CDS:ENST00000314797, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000314797, 	DOMAIN_UNK:ENST00000314797, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4604	SRR064441	chimerascan	2	0	3	X	57994127	58140655	79931683	80065233	+	-	FLNB	BRWD3	58140655	80065233	uc010hnf.2|uc003djk.2|uc010hne.2|uc003djj.2|uc003djl.2|uc003djm.2|	uc004edx.2|uc004edy.2|uc004edz.2|uc004edv.2|uc004edu.2|uc004eea.2|uc004edw.2|uc004edt.2|uc004eeb.2|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000295956,	UnSpec,	UnSpec 	1:ENST00000295956, 	2257:ENST00000295956, 	-1:UnSpec, 	-1:UnSpec, 	MPVTEKDLAEDAPWKKIQQNTFTRWCNEHLKCVNKRIGNLQTDLSDGLRLIALLEVLSQKRMYRKYHQRPTFRQMQLENVSVALEFLDRESIKLVSIDSKAIVDGNLKLILGLVWTLILHYSISMPVWEDEGDDDAKKQTPKQRLLGWIQNKIPYLPITNFNQNWQDGKALGALVDSCAPGLCPDWESWDPQKPVDNAREAMQQADDWLGVPQVITPEEIIHPDVDEHSVMTYLSQFPKAKLKPGAPLKPKLNPKKARAYGRGIEPTGNMVKQPAKFTVDTISAGQGDVMVFVEDPEGNKEEAQVTPDSDKNKTYSVEYLPKVTGLHKVTVLFAGQHISKSPFEVSVDKAQGDASKVTAKGPGLEAVGNIANKPTYFDIYTAGAGVGDIGVEVEDPQGKNTVELLVEDKGNQVYRCVYKPMQPGPHVVKIFFAGDTIPKSPFVVQVGEACNPNACRASGRGLQPKGVRIRETTDFKVDTKAAGSGELGVTMKGPKGLEELVKQKDFLDGVYAFEYYPSTPGRYSIAITWGGHHIPKSPFEVQVGPEAGMQKVRAWGPGLHGGIVGRSADFVVESIGSEVGSLGFAIEGPSQAKIEYNDQNDGSCDVKYWPKEPGEYAVHIMCDDEDIKDSPYMAFIHPATGGYNPDLVRAYGPGLEKSGCIVNNLAEFTVDPKDAGKAPLKIFAQDGEGQRIDIQMKNRMDGTYACSYTPVKAIKHTIAVVWGGVNIPHSPYRVNIGQGSHPQKVKVFGPGVERSGLKANEPTHFTVDCTEAGEGDVSVGIKCDARVLSEDEEDVDFDIIHNANDTFTVKYVPPAAGRYTIKVLFASQEIPASPFRVKVDPSHDASKVKAEGPGLSKAGVENGKPTHFTVYTKGAGKAPLNVQFNSPLPGDAVKDLDIIDNYDYSHTVKYTPTQQGNMQVLVTYGGDPIPKSPFTVGVAAPLDLSKIKLNGLENRVEVGKDQEFTVDTRGAGGQGKLDVTILSPSRKVVPCLVTPVTGRENSTAKFIPREEGLYAVDVTYDGHPVPGSPYTVEASLPPDPSKVKAHGPGLEGGLVGKPAEFTIDTKGAGTGGLGLTVEGPCEAKIECSDNGDGTCSVSYLPTKPGEYFVNILFEEVHIPGSPFKADIEMPFDPSKVVASGPGLEHGKVGEAGLLSVDCSEAGPGALGLEAVSDSGTKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGGELVPHFPARVKVEPAVDTSRIKVFGPGIEGKDVFREATTDFTVDSRPLTQVGGDHIKAHIANPSGASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDVPIPNSPFKVAVTEGCQPSRVQAQGPGLKEAFTNKPNVFTVVTRGAGIGGLGITVEGPSESKINCRDNKDGSCSAEYIPFAPGDYDVNITYGGAHIPGSPFRVPVKDVVDPSKVKIAGPGLGSGVRARVLQSFTVDSSKAGLAPLEVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEGPYMVSVKYADEEIPRSPFKVKVLPTYDASKVTASGPGLSSYGVPASLPVDFAIDARDAGEGLLAVQITDQEGKPKRAIVHDNKDGTYAVTYIPDKTGRYMIGVTYGGDDIPLSPYRIRATQTGDASKCLATGPGIASTVKTGEEVGFVVDAKTAGKGKVTCTVLTPDGTEAEADVIENEDGTYDIFYTAAKPGTYVIYVRFGGVDIPNSPFTVMATDGEVTAVEEAPVNACPPGFRPWVTEEAYVPVSDMNGLGFKPFDLVIPFAVRKGEITGEVHMPSGKTATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYMGSHIPESPLQFYVNYPNSGSVSAYGPGLVYGVANKTATFTIVTEDAGEGGLDLAIEGPSKAEISCIDNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFTAKITDDSRRCSQVKLGSAADFLLDISETDLSSLTASIKAPSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKKNGNHVANSPVSIMVVQSEIGDARRAKVYGRGLSEGRTFEMSDFIVDTRDAGYGGISLAVEGPSKVDIQTEDLEDGTCKVSYFPTVPGVYIVSTKFADEHVPGSPFTVKISGEGRVKESITRTSRAPSVATVGSICDLNLKIPEINSSDMSAHVTSPSGRVTEAEIVPMGKNSHCVRFVPQEMGVHTVSVKYRGQHVTGSPFQFTVGPLGEGGAHKVRAGGPGLERGEAGVPAEFSIWTREAGAGGLSIAVEGPSKAEITFDDHKNGSCGVSYIAQEP:ENST00000295956-UnSpec, 	Intron:ENST00000295956, 	-1:UnSpec, 	CDS:ENST00000295956, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000295956, 	DOMAIN_UNK:ENST00000295956, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0022	4605	SRR064441	chimerascan	2	0	17_ctg5_hap1	17	266212	347238	44377160	44415158	-	+	NSF	LRRC37A	266212	44377160	uc010wwm.1|uc010wwo.1|uc010wwn.1|uc010wwl.1|	uc002ikg.2|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000320254,	InFrame 	-1:UnSpec, 	-1:UnSpec, 	870:ENST00000320254, 	1700:ENST00000320254, 	NFQGNYISYIDGNVWKAYSWTEKLILRENNLTELHKDSFEGLLSLQYLDLSCNKIQSIERHTFEPLPFLKFINLSCNVITELSFGTFQAWHGMQFLHKLILNHNPLTTVEDPYLFKLPALKYLDMGTTLVPLTTLKNILMMTVELEKLILPSHMACCLCQFKNSIEAVCKTVKLHCNSACLTNTTHCPEEASVGNPEGAFMKVLQARKNYTSTELIVEPEEPSDSSGINLSGFGSEQLDTNDESDFISTLSYILPYFSAVNLDVKSLLLPFIKLPTTGNSLAKIQTVGQNRQRVKRVLMGPRSIQKRHFKEVGRQSIRREQGAQASVENAAEEKRLTSPAPREVEQPHTQQGPEKLAGNAVYTKPSFTQEHKAAVSVLKPFSKGTPSTSSPAKALPQVRDRSKDLTHAISILESAKARVTNTKTSKPIVHARKKYRFHKTRSHVTHRTTKVKKSPKVRKKSYLSRLMLANRLPFSAAKSLINSPSQGAFSSLGDLSPQENPFLEVSALSEHFIEKNNTKHTTARNAFEENDFMENTNMPEGTISENTNYNHPPEADSAGTAFNLGPTVKQTETKWEYNNVGTDLSPEPKSFNYPLLSSPGDQFEIQLTQQLQSLIPNNNVRRLIAHVIRTLKMDCSGAHVQVTCAKLISRTGHLMKLLSGQQEVKASKIEWDTDQWKIENYINESTEAQSEQKEKSLELKKEVPGYGYTDKLILALIVTGILTILIILFCLIVICCHRRSLQEDEEGFSRGIFRFLPWRGCSSRRESQDGLSSFGQPLWFKDLYKPLSATRINNHAWKLHKKSSNEDKILNRDPGDSEAPTEEEESEALP:UnSpec-ENST00000320254, 	-1:UnSpec, 	2:ENST00000320254, 	Intergenic:UnSpec, 	CDS:ENST00000320254, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000320254, 	DOMAIN_UNK:ENST00000320254, 
0.0002	4606	SRR064441	chimerascan	2	0	12	12	6574056	6579843	6548167	6557903	-	-	VAMP1	LOC678655	6574056	6557903	uc001qok.2|uc001qoj.2|	uc001qob.2|uc009zel.1|uc001qoc.2|uc009zem.1|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000361716,	UnSpec,	UnSpec 	1:ENST00000361716, 	113:ENST00000361716, 	-1:UnSpec, 	-1:UnSpec, 	MSAPAQPPAEGTEGTAPGGGPPGPPPNMTSNRRLQQTQAQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWWKNCKMMIMLGAICAIIVVVIV:ENST00000361716-UnSpec, 	4:ENST00000361716, 	-1:UnSpec, 	CDS:ENST00000361716, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000361716, 	DOMAIN_UNK:ENST00000361716, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0348	4607	SRR064441	chimerascan	2	0	10	16	133918313	133982537	719553	724170	+	+	JAKMIP3,DKFZp686B1027	RHOT2	133982537	719553	uc009yba.1|uc001lky.1|uc001lkx.3|	uc002ciq.2|	breast_cancer	SRR064441,	breast_cancer,	5p_KINASE	ENST00000298622,	ENST00000315082,	InFrame 	1:ENST00000298622, 	844:ENST00000298622, 	-1:ENST00000315082, 	-1:ENST00000315082, 	MSKRGMSSRAKGDKAEALAALQAANEDLRAKLTDIQIELQQEKSKVSKVEREKNQELRQVREHEQHKTAVLLTELKTKLHEEKMKELQAVRETLLRQHEAELLRVIKIKDNENQRLQALLSALRDGGPEKVKTVLLSEAKEEAKKGFEVEKVKMQQEISELKGAKRQVEEALTLVIQADKIKAAEIRSVYHLHQEEITRIKKECEREIRRLMEEIKFKDRAVFVLERELGVQAGHAQRLQLQKEALDEQLSQVREADRHPGSPRRELPHAAGAGDASDHSGSPEQQLDEKDARRFQLKIAELSAIIRKLEDRNALLSEERNELLKRVREAESQYKPLLDKNKRLSRKNEDLSHALRRMENKLKFVTQENIEMRQRAGIIRRPSSLNDLDQSQDEREVDFLKLQIVEQQNLIDELSKTLETAGYVKSVLERDKLLRFRKQRKKMAKLPKPVVVETFFGYDEEASLESDGSSVSYQTDRTDQTPCTPDDDLEEGMAKEETELRFRQLTMEYQALQRAYALLQEQVGGTLDAEREVKTREQLQAEVQRAQARIEDLEKALAEQGQDMKWIEEKQALYRRNQELVEKIKQMETEEARLRHEVQDARDQNELLEFRILELEERERKSPAISFHHTPFVDGKSPLQVYCEAEGVTDIVVAELMKKLDILGDNANLTNEEQVVVIQARTVLTLAEKWLQQIEETEAALQRKMVDLESEKELFSKQKGYLDEELDYRKQALDQANKHILELEAMLYDALQQEAGAKVAELLSEEEREKLKVAVEQWKRQVMSELRERDAQILRERMELLQLAQQRIKELEERIEAQKRQIKELEEKFLFLFLFFSLAFILWS:ENST00000298622-ENST00000315082, 	Intron:ENST00000298622, 	Intron:ENST00000315082, 	3UTR:ENST00000298622, 	CDS:ENST00000315082, 	NO_DOMAIN:ENST00000298622, 	NO_DOMAIN:ENST00000298622, 	DOMAIN_UNK:ENST00000315082, 	DOMAIN_UNK:ENST00000315082, 
0.3124	4608	SRR064441	chimerascan	2	0	1	17	205600760	205602000	7212934	7215780	-	+	ELK4	AK303306,EIF5A	205600760	7212934	uc001hcz.2|uc001hcy.1|	uc002gft.2|uc002gfr.2|uc010vtu.1|uc002gfu.2|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000289703,	ENST00000336452,	FrameShift 	-1:ENST00000289703, 	-1:ENST00000289703, 	-1:ENST00000336452, 	-1:ENST00000336452, 	MRAAAGTRRARLGRRRLLRLRRGGRSGCRAVLEFPA*:ENST00000289703-ENST00000336452, 	1:ENST00000289703, 	2:ENST00000336452, 	5UTR:ENST00000289703, 	CDS:ENST00000336452, 	DOMAIN_UNK:ENST00000289703, 	DOMAIN_UNK:ENST00000289703, 	NO_DOMAIN:ENST00000336452, 	Region=DOHH-binding,:ENST00000336452, 
0.0002	4609	SRR064441	chimerascan	2	0	2	2	112101638	112252692	112526641	112596089	-	-	LOC541471	ANAPC1	112101638	112596089	uc002the.2|	uc002thi.2|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000341068,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000341068, 	-1:ENST00000341068, 	V*:UnSpec-ENST00000341068, 	-1:UnSpec, 	Intron:ENST00000341068, 	Intergenic:UnSpec, 	CDS:ENST00000341068, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000341068, 	DOMAIN_UNK:ENST00000341068, 
0.2361	4610	SRR064441	chimerascan	2	0	1	19	224301791	224302098	38866800	38873393	+	+	FBXO28,KIAA0483	PSMD8	224302098	38866800	uc009xef.2|uc001hoh.2|uc010pvc.1|	uc010efx.1|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000523990,ENST00000424254,ENST00000366862,	ENST00000215071,	InFrame 	1:ENST00000523990,ENST00000424254,ENST00000366862, 	89:ENST00000523990,ENST00000424254,ENST00000366862, 	121:ENST00000215071, 	350:ENST00000215071, 	MAAAAEERMAEEGGGGQGDGGSSLASGSTQRQPPPPAPQHPQPGSQALPAPALAPDQLPQNNTLVALPIVAIENILSFMSYDEISQLRLVVLLELNFLPTTGTKLTKQQLILARDILEIGAQWSILRKDIPSFERYMAQLKCYYFDYKEQLPESAYMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDIQTNVYIKHPVSLEQYLMEGSYNKVFLAKGNIPAESYTFFIDILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMTDYAKKRGWVLGPNNYYSFASQQQKPEDTTIPSTELAKQVIEYARQLEMIV:ENST00000424254-ENST00000215071,ENST00000523990-ENST00000215071,ENST00000366862-ENST00000215071, 	Intron:ENST00000523990,ENST00000424254,ENST00000366862, 	2:ENST00000215071, 	CDS:ENST00000523990,ENST00000424254,ENST00000366862, 	CDS:ENST00000215071, 	Domain=F-box;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00080,:ENST00000424254,ENST00000366862, Domain=F-box;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50181,:ENST00000523990, 	NO_DOMAIN:ENST00000523990,ENST00000424254,ENST00000366862, 	NO_DOMAIN:ENST00000215071, 	NO_DOMAIN:ENST00000215071, 
0.0002	4611	SRR064441	chimerascan	2	0	8	8	144921681	144922202	74858634	74868289	-	-	NRBP2	TCEB1	144921681	74868289	uc010mfm.2|uc003yzv.2|uc011lks.1|uc003yzy.2|	uc003xzz.1|uc003yaa.1|uc003xzx.1|uc003xzy.1|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000442628,	ENST00000522337,ENST00000284811,ENST00000520242,ENST00000523815,ENST00000519487,ENST00000518127,	FrameShift 	1:ENST00000442628, 	161:ENST00000442628, 	-1:ENST00000522337,ENST00000284811,ENST00000520242,ENST00000523815,ENST00000519487,ENST00000518127, 	-1:ENST00000522337,ENST00000284811,ENST00000520242,ENST00000523815,ENST00000519487,ENST00000518127, 	MAAPEPAPRRAREREREREDESEDESDILEESPCGRWQKRREQVNQGNMPGLQSTFLAMDTEEGVEVVWNELHFGDRKAFAAHEEKIQTVFEQLVLVDHPNIVKLHKYWLDTSEACARVIFITEYVSSGSLKQFLKKTKKNHKAMNARAWKRWCTQILSALRWRGENLWWL*:ENST00000442628-ENST00000519487,ENST00000442628-ENST00000522337,ENST00000442628-ENST00000523815,ENST00000442628-ENST00000518127,ENST00000442628-ENST00000284811,ENST00000442628-ENST00000520242, 	5:ENST00000442628, 	Intron:ENST00000522337,ENST00000284811,ENST00000520242,ENST00000523815,ENST00000519487,ENST00000518127, 	CDS:ENST00000442628, 	CDS:ENST00000522337,ENST00000284811,ENST00000520242,ENST00000523815,ENST00000519487,ENST00000518127, 	Domain=Protein kinase;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00159,:ENST00000442628, 	NO_DOMAIN:ENST00000442628, 	NO_DOMAIN:ENST00000522337,ENST00000284811,ENST00000520242,ENST00000523815,ENST00000519487,ENST00000518127, 	NO_DOMAIN:ENST00000522337,ENST00000284811,ENST00000520242,ENST00000523815,ENST00000519487,ENST00000518127, 
0.0002	4612	SRR064441	chimerascan	2	0	9	9	37120469	37302228	37086665	37087992	+	+	ZCCHC7	BC067112	37302228	37086665	uc011lqh.1|	uc003zzp.1|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000336755,	UnSpec,	UnSpec 	1:ENST00000336755, 	218:ENST00000336755, 	-1:UnSpec, 	-1:UnSpec, 	MMFGGYETIEAYEDDLYRDESSSELSVDSEVEFQLYSQIHYAQDLDDVIREEEHEEKNSGNSESSSSKPNQKKLIVLSDSEVIQLSDGSEVITLSDEDSIYRCKGKNVRVQAQENAHGLSSSLQSNELVDKKCKSDIEKPKSEERSGVIREVMIIEVSSSEEEESTISEGDNVESWMLLGCEVDDKDDDILLNLVGCENSVTEGEDGINWSISDKDIE:ENST00000336755-UnSpec, 	Intron:ENST00000336755, 	-1:UnSpec, 	CDS:ENST00000336755, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000336755, 	DOMAIN_UNK:ENST00000336755, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0022	4613	SRR064441	chimerascan	2	0	17_ctg5_hap1	17	266212	347238	44594728	44633014	-	+	NSF	LRRC37A2	266212	44594728	uc010wwm.1|uc010wwo.1|uc010wwn.1|uc010wwl.1|	uc002ikn.1|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000333412,	InFrame 	-1:UnSpec, 	-1:UnSpec, 	870:ENST00000333412, 	1700:ENST00000333412, 	NFQGNYISYIDGNVWKAYSWTEKLILRENNLTELHKDSFEGLLSLQYLDLSCNKIQSIERHTFEPLPFLKFINLSCNVITELSFGTFQAWHGMQFLHKLILNHNPLTTVEDPYLFKLPALKYLDMGTTLVPLTTLKNILMMTVELEKLILPSHMACCLCQFKNSIEAVCKTVKLHCNSACLTNTTHCPEEASVGNPEGAFMKVLQARKNYTSTELIVEPEEPSDSSGINLSGFGSEQLDTNDESDFISTLSYILPYFSAVNLDVKSLLLPFIKLPTTGNSLAKIQTVGQNRQRVKRVLMGPRSIQKRHFKEVGRQSIRREQGAQASVENAAEEKRLGSPAPREVEQPHTQQGPEKLAGNAVYTKPSFTQEHKAAVSVLKPFSKGAPSTSSPAKALPQVRDRWKDLTHAISILESAKARVTNTKTSKPIVHARKKYRFHKTRSHVTHRTPKVKKSPKVRKKSYLSRLMLANRLPFSAAKSLINSPSQGAFSSLGDLSPQENPFLEVSAPSEHFIENNNTKHTTARNAFEENDFMENTNMPEGTISENTNYNHPHEADSAGTAFNLGPTVKQTETKWEYNNVGTDLSPEPKSFNYPLLSSPGDQFEIQLTQQLQSLIPNNNVRRLIAHVIRTLKMDCSGAHVQVTCAKLISRTGHLMKLLSGQQEVKASKIEWDTDQWKIENYINESTEAQSEQKEKSLELKKEVPGYGYTDKLILALIVTGILTILIILFCLIVICCHRRSLQEDEEGFSRGIFRFLPWRGCSSRRESQDGLSSFGQPLWFKDMYKPLSATRINNHAWKLHKKSSNEDKILNRDPGDSEAPTEEEESEALP:UnSpec-ENST00000333412, 	-1:UnSpec, 	2:ENST00000333412, 	Intergenic:UnSpec, 	CDS:ENST00000333412, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000333412, 	DOMAIN_UNK:ENST00000333412, 
0.0003	4614	SRR064441	chimerascan	2	0	17	15	37856254	37856564	57210833	57580712	+	+	ERBB2	TCF12	37856564	57210833	uc010wek.1|	uc010bfs.2|uc010ugn.1|uc002aed.2|uc002aea.2|uc002aeb.2|uc002aec.2|	breast_cancer	SRR064438,SRR064441,	breast_cancer,	5p_KINASE	ENST00000269571,	ENST00000267811,	FrameShift 	1:ENST00000269571, 	24:ENST00000269571, 	-1:ENST00000267811, 	-1:ENST00000267811, 	MELAALCRWGLLLALLPPGAASTQGRRRAERGGEAASAKKMSA*:ENST00000269571-ENST00000267811, 	Intron:ENST00000269571, 	-1:ENST00000267811, 	CDS:ENST00000269571, 	5UTR:ENST00000267811, 	DOMAIN_UNK:ENST00000269571, 	DOMAIN_UNK:ENST00000269571, 	DOMAIN_UNK:ENST00000267811, 	DOMAIN_UNK:ENST00000267811, 
0.5700	4615	SRR064441	chimerascan	2	0	1	7	27860794	27930143	123181084	123190640	-	-	AHDC1	NDUFA5	27860794	123190640	uc009vsy.2|	uc003vkr.2|uc003vks.2|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000247087,	ENST00000355749,	InFrame 	1:ENST00000247087, 	1603:ENST00000247087, 	-1:ENST00000355749, 	-1:ENST00000355749, 	MRVKPQGLVVTSSAVCSSPDYLREPKYYPGGPPTPRPLLPTRPPASPPDKAFSTHAFSENPRPPPRRDPSTRRPPVLAKGDDPLPPRAARPVSQARCPTPVGDGSSSRRCWDNGRVNLRPVVQLIDIMKDLTRLSQDLQHSGVHLDCGGLRLSRPPAPPPGDLQYSFFSSPSLANSIRSPEERATPHAKSERPSHPLYEPEPEPRDSPQPGQGHSPGATAAATGLPPEPEPDSTDYSELADADILSELASLTCPEAQLLEAQALEPPSPEPEPQLLDPQPRFLDPQALEPLGEALELPPLQPLADPLGLPGLALQALDTLPDSLESQLLDPQALDPLPKLLDVPGRRLEPQQPLGHCPLAEPLRLDLCSPHGPPGPEGHPKYALRRTDRPKILCRRRKAGRGRKADAGPEGRLLPLPMPTGLVAALAEPPPPPPPPPPALPGPGPVSVPELKPESSQTPVVSTRKGKCRGVRRMVVKMAKIPVSLGRRNKTTYKVSSLSSSLSVEGKELGLRVSAEPTPLLKMKNNGRNVVVVFPPGEMPIILKRKRGRPPKNLLLGPGKPKEPAVVAAEAATVAAATMAMPEVKKRRRRKQKLASPQPSYAADANDSKAEYSDVLAKLAFLNRQSQCAGRCSPPRCWTPSEPESVHQAPDTQSISHFLHRVQGFRRRGGKAGGFGGRGGGHAAKSARCSFSDFFEGIGKKKKVVAVAAAGVGGPGLTELGHPRKRGRGEVDAVTGKPKRKRRSRKNGTLFPEQVPSGPGFGEAGAEWAGDKGGGWAPHHGHPGGQAGRNCGFQGTEARAFASTGLESGASGRGSYYSTGAPSGQTELSQERQNLFTGYFRSLLDSDDSSDLLDFALSASRPESRKASGTYAGPPTSALPAQRGLATFPSRGAKASPVAVGSSGAGADPSFQPVLSARQTFPPGRAASYGLTPAASDCRAAETFPKLVPPPSAMARSPTTHPPANTYLPQYGGYGAGQSVFAPTKPFTGQDCANSKDCSFAYGSGNSLPASPSSAHSAGYAPPPTGGPCLPPSKASFFSSSEGAPFSGSAPTPLRCDSRASTVSPGGYMVPKGTTASATSAASAASSSSSSFQPSPENCRQFAGASQWPFRQGYGGLDWASEAFSQLYNPSFDCHVSEPNVILDISNYTPQKVKQQTAVSETFSESSSDSTQFNQPVGGGGFRRANSEASSSEGQSSLSSLEKLMMDWNEASSAPGYNWNQSVLFQSSSKPGRGRRKKVDLFEASHLGFPTSASAAASGYPSKRSTGPRQPRGGRGGGACSAKKERGGAAAKAKFIPKPQPVNPLFQDSPDLGLDYYSGDSSMSPLPSQSRAFGVGERDPCDFIGPYSMNPSTPSDGTFGQGFHCDSPSLGAPELDGKHFPPLAHPPTVFDAGLQKAYSPTCSPTLGFKEELRPPPTKLAACEPLKHGLQGASLGHAAAAQAHLSCRDLPLGQPHYDSPSCKGTAYWYPPGSAARSPPYEGKVGTGLLADFLGRTEAACLSAPHLASPPATPKADKEPLEMARPPGPPRGPAAAAAGYGCPLLSDLTLSPVPRDSLLPLQDTAYRYPGFMPQAHPGLGGGPKSGFLGPMAEPHPEDTFTVTSL:ENST00000247087-ENST00000355749, 	Intron:ENST00000247087, 	Intron:ENST00000355749, 	3UTR:ENST00000247087, 	CDS:ENST00000355749, 	NO_DOMAIN:ENST00000247087, 	NO_DOMAIN:ENST00000247087, 	DOMAIN_UNK:ENST00000355749, 	DOMAIN_UNK:ENST00000355749, 
0.0003	4616	SRR064441	chimerascan	2	0	17	X	37856254	37856564	133903597	133930385	+	-	ERBB2	FAM122B	37856564	133930385	uc010wek.1|	uc004exv.2|uc004exq.2|uc004exr.2|	breast_cancer	SRR064287,SRR064441,	breast_cancer,	5p_KINASE	ENST00000269571,	ENST00000298090,	FrameShift 	1:ENST00000269571, 	24:ENST00000269571, 	-1:ENST00000298090, 	-1:ENST00000298090, 	MELAALCRWGLLLALLPPGAASTQGPPPPSPSLRPLAPAPSCQSPAAQSCSESLGSP*:ENST00000269571-ENST00000298090, 	Intron:ENST00000269571, 	-1:ENST00000298090, 	CDS:ENST00000269571, 	5UTR:ENST00000298090, 	DOMAIN_UNK:ENST00000269571, 	DOMAIN_UNK:ENST00000269571, 	DOMAIN_UNK:ENST00000298090, 	DOMAIN_UNK:ENST00000298090, 
0.0002	4617	SRR064441	chimerascan	2	0	17_ctg5_hap1	17	266212	347238	43616529	43623042	-	-	NSF	LRRC37A2	266212	43623042	uc010wwm.1|uc010wwo.1|uc010wwn.1|uc010wwl.1|	uc002ijh.2|uc010wjv.1|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	4618	SRR064441	chimerascan	2	0	12	8	124824552	125020157	22463598	22477975	-	+	NCOR2	KIAA1967	124824552	22463598	uc010taz.1|uc010tay.1|	uc003xci.2|uc003xch.2|	breast_cancer	SRR064439,SRR064441,	breast_cancer,	NO_KINASE	ENST00000356219,	ENST00000389279,ENST00000521301,ENST00000308511,	FrameShift 	1:ENST00000356219, 	1902:ENST00000356219, 	-1:ENST00000389279,ENST00000521301,ENST00000308511, 	-1:ENST00000389279,ENST00000521301,ENST00000308511, 	MSGSTQPVAQTWRATEPRYPPHSLSYPVQIARTHTDVGLLEYQHHSRDYASHLSPGSIIQPQRRRPSLLSEFQPGNERSQELHLRPESHSYLPELGKSEMEFIESKRPRLELLPDPLLRPSPLLATGQPAGSEDLTKDRSLTGKLEPVSPPSPPHTDPELELVPPRLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKPPEPEKPVSPPPIESKHRSLVQIIYDENRKKAEAAHRILEGLGPQVELPLYNQPSDTRQYHENIKINQAMRKKLILYFKRRNHARKQWEQKFCQRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQRELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDADQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYKSLVRRSYRRRGKSQQQQQQQQQQQQQQQQQPMPRSSQEEKDEKEKEKEAEKEEEKPEVENDKEDLLKEKTDDTSGEDNDEKEAVASKGRKTANSQGRRKGRITRSMANEANSEEAITPQQSAELASMELNESSRWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKNFYFNYKKRQNLDEILQQHKLKMEKERNARRKKKKAPAAASEEAAFPPVVEDEEMEASGVSGNEEEMVEEAEALHASGNEVPRGECSGPATVNNSSDTESIPSPHTEAAKDTGQNGPKPPATLGADGPPPGPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPPVVPKEEKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEAAEATAEGALKAEKKEGGSGRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLSPRPSLLTPTGDPRANASPQKPLDLKQLKQRAAAIPPIVTKVHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAEAQKLPGDPPCWTSGLPFPVPPREVIKASPHAPDPSAFSYAPPGHPLPLGLHDTARPVLPRPPTISNPPPLISSAKHPSVLERQIGAISQGMSVQLHVPYSEHAKAPVGPVTMGLPLPMDPKKLAPFSGVKQEQLSPRGQAGPPESLGVPTAQEASVLRGTALGSVPGGSITKGIPSTRVPSDSAITYRGSITHGTPADVLYKGTITRIIGEDSPSRLDRGREDSLPKGHVIYEGKKGHVLSYEGGMSVTQCSKEDGRSSSGPPHETAAPKRTYDMMEGRVGRAISSASIEGLMGRAIPPERHSPHHLKEQHHIRGSITQGIPRSYVEAQEDYLRREAKLLKREGTPPPPPPSRDLTEAYKTQALGPLKLKPAHEGLVATVKEAGRSIHEIPREELRHTPELPLAPRPLKEGSITQGTPLKYDTGASTTGSKKHDVRSLIGSPGRTFPPVHPLDVMADARALERACYEESLKSRPGTASSSGGSIARGAPVIVPELGKPRQSPLTYEDHGAPFAGHLPRGSPVTTREPTPRLQEGSLSSSKASQDRKLTSTPREIAKSPHSTVPEHHPHPISPYEHLLRGVSGVDLYRSHIPLAFDPTSIPRGIPLDAAAAYYLPRHLAPNPTYPHLYPPYLIRGYPDTAALENRQTIINDYITSQQMHHNAATAMAQRADMLRGLSPRESSLALNYAAGPRGIIDLSQVPHLPVLVPPTPGTPATAMDRLAYLPTAPQPFSSRHSSSPLSPGGPTHLTKPTTTSSSERERDRDRERDRDREREKSILTSTTTVEHAPIWRPGTEQSSGSSGGGGGSSSRPASHSHAHQHSPISPRTQDALQQRPSVLHNTGMKGIITAVEPSTPTVLTQLQHLFWALLLVCSLLLWPQNCPRMPGTFRVGRNSGSSLVLLPACMTTLGLWMKRSFFS*:ENST00000356219-ENST00000521301,ENST00000356219-ENST00000308511,ENST00000356219-ENST00000389279, 	38:ENST00000356219, 	3:ENST00000389279,ENST00000521301,ENST00000308511, 	CDS:ENST00000356219, 	CDS:ENST00000389279,ENST00000521301,ENST00000308511, 	Domain=SANT 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00624,Domain=SANT 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00624,Region=Interaction with SIN3A/B;Ontology_term=ECO:0000250;evidence=ECO:0000250,:ENST00000356219, 	Region=Required for interaction with RARA in the absence of its ligand,:ENST00000356219, 	NO_DOMAIN:ENST00000389279,ENST00000521301,ENST00000308511, 	Domain=S1-like;Ontology_term=ECO:0000259;evidence=ECO:0000259|Pfam:PF14444,:ENST00000521301, Region=Interaction with MCC;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24824780;Dbxref=PMID:24824780,Region=Interaction with NR1D1;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:23398316;Dbxref=PMID:23398316,:ENST00000389279,ENST00000308511, 
0.0002	4619	SRR064441	chimerascan	2	0	17_ctg5_hap1	17_ctg5_hap1	266212	347238	197706	236005	-	-	NSF	LRRC37A2,LRRC37A	266212	236005	uc010wwm.1|uc010wwo.1|uc010wwn.1|uc010wwl.1|	uc010wwv.1|uc010wwg.1|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0004	4620	SRR064441	chimerascan	2	0	14	11	91282519	91282761	47602077	47606115	-	+	TTC7B	NDUFS3,DKFZp586K0821	91282519	47602077	uc001xyp.2|	uc001nft.3|uc001nga.2|uc010rhn.1|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000328459,	ENST00000263774,	FrameShift 	1:ENST00000328459, 	40:ENST00000328459, 	-1:ENST00000263774, 	-1:ENST00000263774, 	MATKKAGSRLETEIERCRSECQWERIPELVKQLSAKLIANHCQTTE*:ENST00000328459-ENST00000263774, 	1:ENST00000328459, 	3:ENST00000263774, 	CDS:ENST00000328459, 	CDS:ENST00000263774, 	NO_DOMAIN:ENST00000328459, 	Repeat=TPR 1,Repeat=TPR 2,Repeat=TPR 3,Repeat=TPR 4,Repeat=TPR 5,Repeat=TPR 6,Repeat=TPR 7,Repeat=TPR 8,Repeat=TPR 9,Repeat=TPR 10,Repeat=TPR 11,:ENST00000328459, 	NO_DOMAIN:ENST00000263774, 	NO_DOMAIN:ENST00000263774, 
0.0004	4621	SRR064441	chimerascan	2	0	12	17	56510374	56511615	37883942	37884914	+	+	RPL41	ERBB2	56511615	37883942	uc001sjo.2|uc001sjn.2|	uc010cwb.2|	breast_cancer	SRR064441,	breast_cancer,	3p_KINASE	UnSpec,	ENST00000269571,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	1138:ENST00000269571, 	1255:ENST00000269571, 	ICEPARCSAPAPFAPRGPSACCPTCWCHSGKAQDSLPREEWGRQRRFCLWGCRGEPRVLDTPGRSCPSAPPSSCLQPSLRQPLLLGPGPTRAGGSTQHLQRDTYGREPRVPGSGRAS:UnSpec-ENST00000269571, 	-1:UnSpec, 	27:ENST00000269571, 	Intergenic:UnSpec, 	CDS:ENST00000269571, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000269571, 	DOMAIN_UNK:ENST00000269571, 
0.0189	4622	SRR064441	chimerascan	2	0	19	17	624719	633568	59489112	59490641	-	+	POLRMT	C17orf82	624719	59489112	uc002lpf.1|	uc002izh.1|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000215591,	ENST00000335108,	FrameShift 	1:ENST00000215591, 	379:ENST00000215591, 	-1:ENST00000335108, 	-1:ENST00000335108, 	MSALCWGRGAAGLKRALRPCGRPGLPGKEGTAGGVCGPRRSSSASPQEQDQDRRKDWGHVELLEVLQARVRQLQAESVSEVVVNRVDVARLPECGSGDGSLQPPRKVQMGAKDATPVPCGRWAKILEKDKRTQQMRMQRLKAKLQMPFQSGEFKALTRRLQVEPRLLSKQMAGCLEDCTRQAPESPWEEQLARLLQEAPGKLSLDVEQAPSGQHSQAQLSGQQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQCMGRQDQDAGTIERCLEQMSQEGLKLQALFTAVLLSEEDRATVLKAVHKVKPTFSLPPQLPPPVNTSKLLRDVYANSSSTPPPLLWRTGATGMAWPCPPEGRSSRARLPS*:ENST00000215591-ENST00000335108, 	5:ENST00000215591, 	-1:ENST00000335108, 	CDS:ENST00000215591, 	5UTR:ENST00000335108, 	DOMAIN_UNK:ENST00000215591, 	DOMAIN_UNK:ENST00000215591, 	DOMAIN_UNK:ENST00000335108, 	DOMAIN_UNK:ENST00000335108, 
0.0002	4623	SRR064441	chimerascan	2	0	17_ctg5_hap1	17_ctg5_hap1	266212	347238	1451566	1489863	-	+	NSF	LRRC37A2	266212	1451566	uc010wwm.1|uc010wwo.1|uc010wwn.1|uc010wwl.1|	uc010wyh.1|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	4624	SRR064286	defuse	5	5	5	7	110427414	110469906	5566782	5603415	+	-	WDR36	ACTB	110463639	5567254	ENSG00000134987|	ENSG00000075624|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE																
0.0001	4625	SRR064286	defuse	7	14	20	1	46130601	46285621	107347023	107347089	+	+	NCOA3	AL627169.1	46211927	107124020	ENSG00000124151|	ENSG00000240872|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000340189,	UnSpec,	UnSpec 	0:ENST00000340189, 	0:ENST00000340189, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000340189-UnSpec, 	Intron:ENST00000340189, 	Intron:UnSpec, 	5UTR:ENST00000340189, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000340189, 	DOMAIN_UNK:ENST00000340189, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4626	SRR064286	defuse	5	10589	19	17	24187160	24187309	33474836	33516364	-	+	5_8S_rRNA.4	UNC45B	24186054	33478117	ENSG00000201966|	ENSG00000141161|	breast_cancer	SRR064286,SRR064438,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000268876,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000268876, 	-1:ENST00000268876, 	VRHISRAPPRGGDSALGSSLFTRHY*:UnSpec-ENST00000268876, 	-1:UnSpec, 	Intron:ENST00000268876, 	Intergenic:UnSpec, 	CDS:ENST00000268876, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000268876, 	DOMAIN_UNK:ENST00000268876, 
0.0003	4627	SRR064286	defuse	9	14	19	19	12757325	12777556	12917428	12924462	-	+	MAN2B1	RNASEH2A	12775209	12928493	ENSG00000104774|	ENSG00000104889|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000221363,	UnSpec,	FrameShift 	1:ENST00000221363, 	342:ENST00000221363, 	-1:UnSpec, 	-1:UnSpec, 	MGAYARASGVCARGCLDSAGPWTMSRALRPPLPPLCFFLLLLAAAGARAGGYETCPTVQPNMLNVHLLPHTHDDVGWLKTVDQYFYGIKNDIQHAGVQYILDSVISALLADPTRRFIYVEIAFFSRWWHQQTNATQEVVRDLVRQGRLEFANGGWVMNDEAATHYGAIVDQMTLGLRFLEDTFGNDGRPRVAWHIDPFGHSREQASLFAQVRPGTSLGPTSSLTLAPPSPSQTPPSPCNLTRTRPRPRPVEALPLE*:ENST00000221363-UnSpec, 	Intron:ENST00000221363, 	-1:UnSpec, 	CDS:ENST00000221363, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000221363, 	DOMAIN_UNK:ENST00000221363, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4628	SRR064286	defuse	7	233	2	18	47558199	47571656	21572737	21715573	+	+	BCYRN1	TTC39C	47562639	21714433	ENSG00000236824|	ENSG00000168234|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE																
0.0002	4629	SRR064286	defuse	6	2	14	14	24734746	24740803	24759804	24768986	-	-	RABGGTA	DHRS1	24740516	24767820	ENSG00000100949|	ENSG00000157379|	breast_cancer	SRR064286,SRR064437,	breast_cancer,normal_tissue,	NO_KINASE	ENST00000216840,	ENST00000288111,	FrameShift 	-1:ENST00000216840, 	-1:ENST00000216840, 	-1:ENST00000288111, 	-1:ENST00000288111, 	MSRDVAPL*:ENST00000216840-ENST00000288111, 	Intron:ENST00000216840, 	Intron:ENST00000288111, 	5UTR:ENST00000216840, 	CDS:ENST00000288111, 	DOMAIN_UNK:ENST00000216840, 	DOMAIN_UNK:ENST00000216840, 	NO_DOMAIN:ENST00000288111, 	NO_DOMAIN:ENST00000288111, 
0.0003	4630	SRR064286	defuse	105	193	20	17	49411431	49493714	58755172	59470198	+	+	BCAS4	BCAS3	49411710	59445688	ENSG00000124243|	ENSG00000141376|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000358791,ENST00000371608,ENST00000355583,ENST00000262591,	ENST00000390652,ENST00000407086,ENST00000408905,	FrameShift 	1:ENST00000358791,ENST00000371608,ENST00000355583,ENST00000262591, 	60:ENST00000358791,ENST00000371608,ENST00000355583,ENST00000262591, 	-1:ENST00000390652,ENST00000407086,ENST00000408905, 	-1:ENST00000390652,ENST00000407086,ENST00000408905, 	MQRTGGGAPRPGRNHGLPGSLRQPDPVALLMLLVDADQPEPMRSGARELALFLTPEPGAEVPLTGA*:ENST00000358791-ENST00000408905,ENST00000358791-ENST00000390652,ENST00000355583-ENST00000408905,ENST00000262591-ENST00000407086,ENST00000371608-ENST00000408905,ENST00000371608-ENST00000407086,ENST00000355583-ENST00000390652,ENST00000358791-ENST00000407086,ENST00000371608-ENST00000390652,ENST00000262591-ENST00000390652,ENST00000355583-ENST00000407086,ENST00000262591-ENST00000408905, 	1:ENST00000358791,ENST00000371608,ENST00000355583,ENST00000262591, 	22:ENST00000408905, 24:ENST00000407086, 23:ENST00000390652, 	CDS:ENST00000358791,ENST00000371608,ENST00000355583,ENST00000262591, 	CDS:ENST00000390652,ENST00000407086,ENST00000408905, 	NO_DOMAIN:ENST00000358791,ENST00000371608,ENST00000355583,ENST00000262591, 	NO_DOMAIN:ENST00000358791,ENST00000371608,ENST00000355583,ENST00000262591, 	NO_DOMAIN:ENST00000390652,ENST00000407086,ENST00000408905, 	Repeat=WD 1,Repeat=WD 2,Repeat=WD 3,Repeat=WD 4,Repeat=WD 5,Repeat=WD 6,Repeat=WD 7,:ENST00000390652,ENST00000407086,ENST00000408905, 
0.0004	4631	SRR064286	defuse	32	7281	17	11	33474836	33516364	83166055	85338966	+	-	UNC45B	DLG2	33478117	85195042	ENSG00000141161|	ENSG00000150672|	breast_cancer	SRR064286,SRR064287,SRR064438,SRR064440,	breast_cancer,	NO_KINASE	ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570,	ENST00000376104,	FrameShift 	1:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	418:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	-1:ENST00000376104, 	-1:ENST00000376104, 	MAEVEAVQLKEEGNRHFQLQDYKAATNSYSQALKLTKDKALLATLYRNRAACGLKTESYVQAASDASRAIDINSSDIKALYRRCQALEHLGKLDQAFKDVQRCATLEPRNQNFQEMLRRLNTSIQEKVSWASSHNPWLPSPSLHS*:ENST00000268876-ENST00000376104,ENST00000433649-ENST00000376104,ENST00000378449-ENST00000376104,ENST00000394570-ENST00000376104, 	Intron:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	Intron:ENST00000376104, 	CDS:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	CDS:ENST00000376104, 	NO_DOMAIN:ENST00000378449,ENST00000433649,ENST00000268876, Repeat=TPR 1,Repeat=TPR 2,Repeat=TPR 3,Repeat=ARM 1,Repeat=ARM 2,:ENST00000394570, 	NO_DOMAIN:ENST00000378449,ENST00000433649, Repeat=ARM 3,:ENST00000394570, Repeat=TPR 1,Repeat=TPR 2,Repeat=TPR 3,Repeat=ARM 1,Repeat=ARM 2,Repeat=ARM 3,:ENST00000268876, 	NO_DOMAIN:ENST00000376104, 	Domain=PDZ 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=PDZ 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=PDZ 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=SH3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00192,Domain=Guanylate kinase-like;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00100,:ENST00000376104, 
0.0001	4632	SRR064286	defuse	7	1	11	4	61727190	61735132	40812044	41218731	-	-	FTH1	APBB2	61734964	41218445	ENSG00000167996|	ENSG00000163697|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000273550,	UnSpec,	UnSpec 	0:ENST00000273550, 	0:ENST00000273550, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000273550-UnSpec, 	Intron:ENST00000273550, 	Intron:UnSpec, 	5UTR:ENST00000273550, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000273550, 	DOMAIN_UNK:ENST00000273550, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0003	4633	SRR064286	defuse	5	193	20	17	49411431	49493714	58755172	59470198	+	+	BCAS4	BCAS3	49411710	59445688	ENSG00000124243|	ENSG00000141376|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000358791,ENST00000371608,ENST00000355583,ENST00000262591,	ENST00000390652,ENST00000407086,ENST00000408905,	FrameShift 	1:ENST00000358791,ENST00000371608,ENST00000355583,ENST00000262591, 	60:ENST00000358791,ENST00000371608,ENST00000355583,ENST00000262591, 	-1:ENST00000390652,ENST00000407086,ENST00000408905, 	-1:ENST00000390652,ENST00000407086,ENST00000408905, 	MQRTGGGAPRPGRNHGLPGSLRQPDPVALLMLLVDADQPEPMRSGARELALFLTPEPGAEVPLTGA*:ENST00000358791-ENST00000408905,ENST00000358791-ENST00000390652,ENST00000355583-ENST00000408905,ENST00000262591-ENST00000407086,ENST00000371608-ENST00000408905,ENST00000371608-ENST00000407086,ENST00000355583-ENST00000390652,ENST00000358791-ENST00000407086,ENST00000371608-ENST00000390652,ENST00000262591-ENST00000390652,ENST00000355583-ENST00000407086,ENST00000262591-ENST00000408905, 	1:ENST00000358791,ENST00000371608,ENST00000355583,ENST00000262591, 	22:ENST00000408905, 24:ENST00000407086, 23:ENST00000390652, 	CDS:ENST00000358791,ENST00000371608,ENST00000355583,ENST00000262591, 	CDS:ENST00000390652,ENST00000407086,ENST00000408905, 	NO_DOMAIN:ENST00000358791,ENST00000371608,ENST00000355583,ENST00000262591, 	NO_DOMAIN:ENST00000358791,ENST00000371608,ENST00000355583,ENST00000262591, 	NO_DOMAIN:ENST00000390652,ENST00000407086,ENST00000408905, 	Repeat=WD 1,Repeat=WD 2,Repeat=WD 3,Repeat=WD 4,Repeat=WD 5,Repeat=WD 6,Repeat=WD 7,:ENST00000390652,ENST00000407086,ENST00000408905, 
0.0002	4634	SRR064286	defuse	6	2	8	10	101698044	101735037	21802407	21814611	-	-	PABPC1	C10orf140	101734093	21811208	ENSG00000070756|	ENSG00000180592|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE																
0.0002	4635	SRR064286	defuse	5	3	13	13	23755091	23899304	23726725	23726825	+	-	SGCG	Y_RNA.566	23777834	23734785	ENSG00000102683|	ENSG00000207157|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE																
0.0002	4636	SRR064286	defuse	11	415	10	19	22045466	22292698	24184075	24184165	-	-	DNAJC1	AC092279.1	22040830	24184150	ENSG00000136770|	ENSG00000251948|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE																
0.0002	4637	SRR064286	defuse	11	13	12	1	34372314	34372611	91726323	91870426	-	-	AC140847.1	HFM1	34372743	91852784	ENSG00000243092|	ENSG00000162669|	breast_cancer	SRR064286,SRR064437,SRR064438,	breast_cancer,normal_tissue,	NO_KINASE	UnSpec,	ENST00000370421,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000370421, 	-1:ENST00000370421, 	GGSIS*:UnSpec-ENST00000370421, 	-1:UnSpec, 	Intron:ENST00000370421, 	Intergenic:UnSpec, 	CDS:ENST00000370421, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:ENST00000370421, 
0.0002	4638	SRR064286	defuse	7	1811	19	17	24184075	24184165	55868619	55868752	-	-	AC092279.1	AC015845.1	24184079	55868752	ENSG00000251948|	ENSG00000244466|	breast_cancer	SRR064286,SRR064440,	breast_cancer,	NO_KINASE																
0.9821	4639	SRR064286	defuse	12	27	20	20	47538275	47653230	46285092	46415360	+	-	ARFGEF2	SULF2	47538547	46365686	ENSG00000124198|	ENSG00000196562|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000371917,	ENST00000359930,ENST00000484875,	InFrame 	1:ENST00000371917, 	40:ENST00000371917, 	59:ENST00000359930,ENST00000484875, 	870:ENST00000359930,ENST00000484875, 	MQESQTKSMFVSRALEKILADKEVKRPQHSQLRRACQVALGSMQVMNKTRRIMEQGGAHFINAFVTTPMCCPSRSSILTGKYVHNHNTYTNNENCSSPSWQAQHESRTFAVYLNSTGYRTAFFGKYLNEYNGSYVPPGWKEWVGLLKNSRFYNYTLCRNGVKEKHGSDYSKDYLTDLITNDSVSFFRTSKKMYPHRPVLMVISHAAPHGPEDSAPQYSRLFPNASQHITPSYNYAPNPDKHWIMRYTGPMKPIHMEFTNMLQRKRLQTLMSVDDSMETIYNMLVETGELDNTYIVYTADHGYHIGQFGLVKGKSMPYEFDIRVPFYVRGPNVEAGCLNPHIVLNIDLAPTILDIAGLDIPADMDGKSILKLLDTERPVNRFHLKKKMRVWRDSFLVERGKLLHKRDNDKVDAQEENFLPKYQRVKDLCQRAEYQTACEQLGQKWQCVEDATGKLKLHKCKGPMRLGGSRALSNLVPKYYGQGSEACTCDSGDYKLSLAGRRKKLFKKKYKASYVRSRSIRSVAIEVDGRVYHVGLGDAAQPRNLTKRHWPGAPEDQDDKDGGDFSGTGGLPDYSAANPIKVTHRCYILENDTVQCDLDLYKSLQAWKDHKLHIDHEIETLQNKIKNLREVRGHLKKKRPEECDCHKISYHTQHKGRLKHRGSSLHPFRKGLQEKDKVWLLREQKRKKKLRKLLKRLQNNDTCSMPGLTCFTHDNQHWQTAPFWTLGPFCACTSANNNTYWCMRTINETHNFLFCEFATGFLEYFDLNTDPYQLMNAVNTLDRDVLNQLHVQLMELRSCKGYKQCNPRTRNMDLGLKDGGSYEQYRQFQRRKWPEMKRPSSKSLGQLWEGWEG:ENST00000371917-ENST00000484875,ENST00000371917-ENST00000359930, 	1:ENST00000371917, 	3:ENST00000359930,ENST00000484875, 	CDS:ENST00000371917, 	CDS:ENST00000359930,ENST00000484875, 	Region=DCB%3B DCB:DCB domain and DCB:HUS domain interaction,:ENST00000371917, 	Domain=SEC7;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00189,Region=HUS%3B DCB:HUS domain interaction,:ENST00000371917, 	NO_DOMAIN:ENST00000359930,ENST00000484875, 	NO_DOMAIN:ENST00000359930,ENST00000484875, 
0.0003	4640	SRR064286	defuse	7	4	8	10	42995556	43057998	8939952	8956559	+	+	HGSNAT	RP11-428L9.1	43035551	8925081	ENSG00000165102|	ENSG00000234752|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000379644,	UnSpec,	FrameShift 	1:ENST00000379644, 	1062:ENST00000379644, 	-1:UnSpec, 	-1:UnSpec, 	MSGAGRALAALLLAASVLSAALLAPGGSSGRDAQAAPPRDLDKKRHAELKMDQALLLIHNELLWTNLTVYWKSECCYHCLFQVLVNVPQSPKAGKPSAAAASVSTQHGSILQLNDTLEEKEVCRLEYRFGEFGNYSLLVKNIHNGVSEIACDLAVNEDPVDSNLPVSIAFLIGLAVIIVISFLRLLLSLDDFNNWISKAISSRETDRLINSELGSPSRTDPLDGDVQPATWRLSALPPRLRSVDTFRGIALILMVFVNYGGGKYWYFKHASWNGLTVADLVFPWFVFIMGSSIFLSMTSILQRGCSKFRLLGKIAWRSFLLICIGIIIVNPNYCLGPCKYFFPLLYIFRLKYGNYML*:ENST00000379644-UnSpec, 	Intron:ENST00000379644, 	-1:UnSpec, 	CDS:ENST00000379644, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000379644, 	DOMAIN_UNK:ENST00000379644, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.5700	4641	SRR064286	defuse	5	8	17	6	1367480	1395995	12008995	12165232	-	+	MYO1C	HIVEP1	1368125	12145750	ENSG00000197879|	ENSG00000095951|	breast_cancer	SRR064286,SRR064439,	breast_cancer,	NO_KINASE	ENST00000359786,	ENST00000379388,	InFrame 	1:ENST00000359786, 	1063:ENST00000359786, 	-1:ENST00000379388, 	-1:ENST00000379388, 	MALQVELVPTGEIIRVVHPHRPCKLALGSDGVRVTMESALTARDRVGVQDFVLLENFTSEAAFIENLRRRFRENLIYTYIGPVLVSVNPYRDLQIYSRQHMERYRGVSFYEVPPHLFAVADTVYRALRTERRDQAVMISGESGAGKTEATKRLLQFYAETCPAPERGGAVRDRLLQSNPVLEAFGNAKTLRNDNSSRFGKYMDVQFDFKGAPVGGHILSYLLEKSRVVHQNHGERNFHIFYQLLEGGEEETLRRLGLERNPQSYLYLVKGQCAKVSSINDKSDWKVVRKALTVIDFTEDEVEDLLSIVASVLHLGNIHFAANEESNAQVTTENQLKYLTRLLSVEGSTLREALTHRKIIAKGEELLSPLNLEQAAYARDALAKAVYSRTFTWLVGKINRSLASKDVESPSWRSTTVLGLLDIYGFEVFQHNSFEQFCINYCNEKLQQLFIELTLKSEQEEYEAEGIAWEPVQYFNNKIICDLVEEKFKGIISILDEECLRPGEATDLTFLEKLEDTVKHHPHFLTHKLADQRTRKSLGRGEFRLLHYAGEVTYSVTGFLDKNNDLLFRNLKETMCSSKNPIMSQCFDRSELSDKKRPETVATQFKMSLLQLVEILQSKEPAYVRCIKPNDAKQPGRFDEVLIRHQVKYLGLLENLRVRRAGFAYRRKYEAFLQRYKSLCPETWPTWAGRPQDGVAVLVRHLGYKPEEYKMGRTKIFIRFPKTLFATEDALEVRRQSLATKIQAAWRGFHWRQKFLRVKRSAICIQSWWRGTLGRRKAAKRKWAAQTIRRLIRGFVLRHAPRCPENAFFLDHVRTSFLLNLRRQLPQNVLDTSWPTPPPALREASELLRELCIKNMVWKYCRSISPEWKQQLQQKAVASEIFKGKKDNYPQSVPRLFISTRLGTDEISPRVLQALGSEPIQYAVPVVKYDRKGYKPRSRQLLLTPNAVVIVEDAKVKQRIDYANLTGISVSSLSDSLFVLHVQRADNKQKGDVVLQSDHVIETLTKTALSANRVNSININQGSITFAGGPGRDGTIDFTPGSELLITKAKNGHLAVVAPRLNSR:ENST00000359786-ENST00000379388, 	Intron:ENST00000359786, 	Intron:ENST00000379388, 	3UTR:ENST00000359786, 	CDS:ENST00000379388, 	Domain=Myosin motor,Domain=IQ 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=IQ 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=TH1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01093,:ENST00000359786, 	NO_DOMAIN:ENST00000359786, 	DOMAIN_UNK:ENST00000379388, 	DOMAIN_UNK:ENST00000379388, 
0.0001	4642	SRR064286	defuse	7	60	3	2	126061478	126076285	33050510	33151760	-	+	KLF15	AL121656.4	126062227	33141356	ENSG00000163884|	ENSG00000230876|	breast_cancer	SRR064286,SRR064439,SRR064441,	breast_cancer,	NO_KINASE	ENST00000296233,	UnSpec,	UnSpec 	0:ENST00000296233, 	0:ENST00000296233, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000296233-UnSpec, 	Intron:ENST00000296233, 	Intron:UnSpec, 	3UTR:ENST00000296233, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000296233, 	DOMAIN_UNK:ENST00000296233, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4643	SRR064286	defuse	21	506	19	2	24184075	24184165	33050510	33151760	-	+	AC092279.1	AL121656.4	24184150	33141647	ENSG00000251948|	ENSG00000230876|	breast_cancer	SRR064286,SRR064287,SRR064437,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	4644	SRR064286	defuse	13	730	22	17	21271714	21308037	33474836	33516364	+	+	CRKL	UNC45B	21265624	33478368	ENSG00000099942|	ENSG00000141161|	breast_cancer	SRR064286,SRR064287,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000268876,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000268876, 	-1:ENST00000268876, 	GF*:UnSpec-ENST00000268876, 	-1:UnSpec, 	Intron:ENST00000268876, 	Intergenic:UnSpec, 	CDS:ENST00000268876, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000268876, 	DOMAIN_UNK:ENST00000268876, 
0.0002	4645	SRR064286	defuse	13	46	14	14	38059189	38069245	38080456	38510647	-	+	FOXA1	CTD-2058B24.1	38061539	38184715	ENSG00000129514|	ENSG00000254868|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000250448,	UnSpec,	UnSpec 	1:ENST00000250448, 	150:ENST00000250448, 	-1:UnSpec, 	-1:UnSpec, 	MLGTVKMEGHETSDWNSYYADTQEAYSSVPVSNMNSGLGSMNSMNTYMTMNTMTTSGNMTPASFNMSYANPGLGAGLSPGAVAGMPGGSAGAMNSMTAAGVTAMGTALSPSGMGAMGAQQAASMNGLGPYAAAMNPCMSPMAYAPSNLGR:ENST00000250448-UnSpec, 	2:ENST00000250448, 	-1:UnSpec, 	CDS:ENST00000250448, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000250448, 	DOMAIN_UNK:ENST00000250448, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4646	SRR064286	defuse	5	893	19	2	24184075	24184165	230045488	230045666	-	-	AC092279.1	AC006368.1	24184077	230045634	ENSG00000251948|	ENSG00000241530|	breast_cancer	SRR064286,SRR064437,SRR064440,	breast_cancer,normal_tissue,	NO_KINASE																
0.0001	4647	SRR064286	defuse	5	951	3	19	126061478	126076285	24184075	24184165	-	-	KLF15	AC092279.1	126061990	24184163	ENSG00000163884|	ENSG00000251948|	breast_cancer	SRR064286,SRR064438,	breast_cancer,	NO_KINASE	ENST00000296233,	UnSpec,	UnSpec 	0:ENST00000296233, 	0:ENST00000296233, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000296233-UnSpec, 	Intron:ENST00000296233, 	Intron:UnSpec, 	3UTR:ENST00000296233, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000296233, 	DOMAIN_UNK:ENST00000296233, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.3124	4648	SRR064286	defuse	5	1	6	6	111580551	111592370	111195973	111216916	+	+	KIAA1919	AMD1	111580714	111196415	ENSG00000173214|	ENSG00000123505|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000368847,	ENST00000368885,	FrameShift 	-1:ENST00000368847, 	-1:ENST00000368847, 	-1:ENST00000368885, 	-1:ENST00000368885, 	MCNVQS*:ENST00000368847-ENST00000368885, 	1:ENST00000368847, 	1:ENST00000368885, 	5UTR:ENST00000368847, 	CDS:ENST00000368885, 	DOMAIN_UNK:ENST00000368847, 	DOMAIN_UNK:ENST00000368847, 	NO_DOMAIN:ENST00000368885, 	NO_DOMAIN:ENST00000368885, 
0.0002	4649	SRR064286	defuse	6	34	20	20	46285092	46415360	52183604	52226446	-	-	SULF2	ZNF217	46415146	52210298	ENSG00000196562|	ENSG00000171940|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE																
0.0002	4650	SRR064286	defuse	8	57	2	16	47558199	47571656	10622279	10674555	+	-	BCYRN1	EMP2	47562622	10638173	ENSG00000236824|	ENSG00000213853|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000359543,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000359543, 	-1:ENST00000359543, 	SQLLVRLRQENCLNPVWEGCSEPRSCIALQPGQQE*:UnSpec-ENST00000359543, 	-1:UnSpec, 	Intron:ENST00000359543, 	Intergenic:UnSpec, 	CDS:ENST00000359543, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000359543, 	DOMAIN_UNK:ENST00000359543, 
0.0002	4651	SRR064286	defuse	24	40	12	16	20704358	20704522	33961052	33962503	+	-	AC112777.1	NCRNA00273	20704492	33963913	ENSG00000240831|	ENSG00000256642|	breast_cancer	SRR064286,SRR064287,SRR064438,SRR064440,	breast_cancer,	NO_KINASE																
0.0002	4652	SRR064286	defuse	13	18	20	20	52183604	52226446	46285092	46415360	-	-	ZNF217	SULF2	52210646	46415149	ENSG00000171940|	ENSG00000196562|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE																
0.0003	4653	SRR064286	defuse	7	15	18	2	45357922	45457515	132905164	133015542	-	-	SMAD2	ANKRD30BL	45379907	133012967	ENSG00000175387|	ENSG00000163046|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000262160,	UnSpec,	FrameShift 	1:ENST00000262160, 	4084:ENST00000262160, 	-1:UnSpec, 	-1:UnSpec, 	MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKTGRLDELEKAITTQNCNTKCVTIPSTCSEIWGLSTPNTIDQWDTTGLYSFSEQTRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELKAIENCEYAFNLKKDEVCVNPYHYQRVETPVLPPVLVPRHTEILTELPPLDDYTHSIPENTNFPAGIEPQSNYIPETPPPGYISEDGETSDQQLNQSMDTGKKNVFENSSVIRYTFLVLFEIHKRCYS*:ENST00000262160-UnSpec, 	Intron:ENST00000262160, 	-1:UnSpec, 	CDS:ENST00000262160, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000262160, 	DOMAIN_UNK:ENST00000262160, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4654	SRR064286	defuse	31	38	12	9	34372314	34372611	79186649	79186950	-	+	AC140847.1	AL161626.1	34372642	79186649	ENSG00000243092|	ENSG00000241781|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE																
0.0001	4655	SRR064286	defuse	8	60	3	2	126061478	126076285	33050510	33151760	-	+	KLF15	AL121656.4	126062227	33141337	ENSG00000163884|	ENSG00000230876|	breast_cancer	SRR064286,SRR064437,	breast_cancer,normal_tissue,	NO_KINASE	ENST00000296233,	UnSpec,	UnSpec 	0:ENST00000296233, 	0:ENST00000296233, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000296233-UnSpec, 	Intron:ENST00000296233, 	Intron:UnSpec, 	3UTR:ENST00000296233, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000296233, 	DOMAIN_UNK:ENST00000296233, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0004	4656	SRR064286	defuse	58	7281	17	11	33474836	33516364	83166055	85338966	+	-	UNC45B	DLG2	33478117	85195042	ENSG00000141161|	ENSG00000150672|	breast_cancer	SRR064286,SRR064287,SRR064438,SRR064440,	breast_cancer,	NO_KINASE	ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570,	ENST00000376104,	FrameShift 	1:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	418:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	-1:ENST00000376104, 	-1:ENST00000376104, 	MAEVEAVQLKEEGNRHFQLQDYKAATNSYSQALKLTKDKALLATLYRNRAACGLKTESYVQAASDASRAIDINSSDIKALYRRCQALEHLGKLDQAFKDVQRCATLEPRNQNFQEMLRRLNTSIQEKVSWASSHNPWLPSPSLHS*:ENST00000268876-ENST00000376104,ENST00000433649-ENST00000376104,ENST00000378449-ENST00000376104,ENST00000394570-ENST00000376104, 	Intron:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	Intron:ENST00000376104, 	CDS:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	CDS:ENST00000376104, 	NO_DOMAIN:ENST00000378449,ENST00000433649,ENST00000268876, Repeat=TPR 1,Repeat=TPR 2,Repeat=TPR 3,Repeat=ARM 1,Repeat=ARM 2,:ENST00000394570, 	NO_DOMAIN:ENST00000378449,ENST00000433649, Repeat=ARM 3,:ENST00000394570, Repeat=TPR 1,Repeat=TPR 2,Repeat=TPR 3,Repeat=ARM 1,Repeat=ARM 2,Repeat=ARM 3,:ENST00000268876, 	NO_DOMAIN:ENST00000376104, 	Domain=PDZ 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=PDZ 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=PDZ 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=SH3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00192,Domain=Guanylate kinase-like;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00100,:ENST00000376104, 
0.0002	4657	SRR064286	defuse	6	18	2	19	47558199	47571656	35168544	35177302	+	+	BCYRN1	ZNF302	47562582	35175106	ENSG00000236824|	ENSG00000089335|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000423823,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000423823, 	-1:ENST00000423823, 	KKKKKKKAVLCFLDIFQIGNQDGKTRNYQQRRIFMMKIHPNQ*:UnSpec-ENST00000423823, 	-1:UnSpec, 	Intron:ENST00000423823, 	Intergenic:UnSpec, 	CDS:ENST00000423823, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000423823, 	DOMAIN_UNK:ENST00000423823, 
0.0003	4658	SRR064286	defuse	6	11	17	17	44370099	44415160	66097708	66111659	+	+	LRRC37A	AC005332.1	44410424	66110663	ENSG00000176681|	ENSG00000237854|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000320254,	UnSpec,	FrameShift 	1:ENST00000320254, 	1737:ENST00000320254, 	-1:UnSpec, 	-1:UnSpec, 	MSSAQCPALVCVMSRLRFWGPWPLLMWQLLWLLVKEAQPLEWVKDPLQLTSNPLGPPESWSSHSSHFPRESPHAPTLPADPWDFDHLGPSASSEMPAPPQESTENLVPFLDTWDSAGEQPLEPEQFLASQQDLKDKLSPQERLPVSPKKLKKDPAQRWSLAEIIGITRQLSTPQSQKQTLQNEYSSTDTPYPGSLPPELRVKSDEPPGPSEQVGPSQFHLEPETQNPETLEDIQSSSLQQEAPAQLPQLLEEEPSSMQQEAPALPPESSMESLTLPNHEVSVQPPGEDQAYYHLPNITVKPADVEVTITSEPTNETESSQAQQETPIQFPEEVEPSATQQEAPIEPPVPPMEHELSISEQQQPVQPSESPREVESSPTQQETPGQPPEHHEVTVSPPGHHQTHHLASPSVSVKPPDVQLTIAAEPSAEVGTSLVHQEATTRLSGSGNDVEPPAIQHGGPPLLPESSEEAGPLAVQQETSFQSPEPINNENPSPTQQEAAAEHPQTAEEGESSLTHQEAPAQTPEFPNVVVAQPPEHSHLTQATVQPLDLGFTITPESKTEVELSPTMKETPTQPPKKVVPQLRVYQGVTNPTPGQDQAQHPVSPSVTVQLLDLGLTITPEPTTEVGHSTPPKRTIVSPKHPEVTLPHPDQVQTQHSHLTRATVQPLDLGFTITPKSMTEVEPSTALMTTAPPPGHPEVTLPPSDKGQAQHSHLTQATVQPLDLELTITTKPTTEVKPSPTTEETSTQPPDLGLAIIPEPTTETGHSTALEKTTAPRPDRVQTLHRSLTEVTGPPTELEPAQDSLVQSESYTQNKALTAPEEHKASTSTNICELCTCGDEMLSCIDLNPEQRLRQVPVPEPNTHNGTFTILNFQGNYISYIDGNVWKAYSWTEKLILRENNLTELHKDSFEGLLSLQYLDLSCNKIQSIERHTFEPLPFLKFINLSCNVITELSFGTFQAWHGMQFLHKLILNHNPLTTVEDPYLFKLPALKYLDMGTTLVPLTTLKNILMMTVELEKLILPSHMACCLCQFKNSIEAVCKTVKLHCNSACLTNTTHCPEEASVGNPEGAFMKVLQARKNYTSTELIVEPEEPSDSSGINLSGFGSEQLDTNDESDFISTLSYILPYFSAVNLDVKSLLLPFIKLPTTGNSLAKIQTVGQNRQRVKRVLMGPRSIQKRHFKEVGRQSIRREQGAQASVENAAEEKRLTSPAPREVEQPHTQQGPEKLAGNAVYTKPSFTQEHKAAVSVLKPFSKGTPSTSSPAKALPQVRDRSKDLTHAISILESAKARVTNTKTSKPIVHARKKYRFHKTRSHVTHRTTKVKKSPKVRKKSYLSRLMLANRLPFSAAKSLINSPSQGAFSSLGDLSPQENPFLEVSALSEHFIEKNNTKHTTARNAFEENDFMENTNMPEGTISENTNYNHPPEADSAGTAFNLGPTVKQTETKWEYNNVGTDLSPEPKSFNYPLLSSPGDQFEIQLTQQLQSLIPNNNVRRLIAHVIRTLKMDCSGAHVQVTCAKLISRTGHLMKLLSGQQEVKASKIEWDTDQWKIENYINESTEAQSEQKEKSLELKKEVPGYGYTDKLILALIVTGILTILIILFCLIVVRTIINSGFQNAVLSLCGFRAHKLKTKATFPPAAT*:ENST00000320254-UnSpec, 	Intron:ENST00000320254, 	-1:UnSpec, 	CDS:ENST00000320254, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000320254, 	DOMAIN_UNK:ENST00000320254, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4659	SRR064286	defuse	16	234	2	5	47558199	47571656	96271098	96373219	+	+	BCYRN1	LNPEP	47562639	96357604	ENSG00000236824|	ENSG00000113441|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000231368,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000231368, 	-1:ENST00000231368, 	VFFVFCLLFFFFFFFFLRQSLALLPRLACNDAISAHCNLHLLGSSVSPASAS*:UnSpec-ENST00000231368, 	-1:UnSpec, 	Intron:ENST00000231368, 	Intergenic:UnSpec, 	CDS:ENST00000231368, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000231368, 	DOMAIN_UNK:ENST00000231368, 
0.0004	4660	SRR064286	defuse	13	8	3	1	63850233	63989138	106623379	106624001	+	-	ATXN7	RP5-947P14.2	63898900	106758926	ENSG00000163635|	ENSG00000230932|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000295900,	UnSpec,	FrameShift 	1:ENST00000295900, 	208:ENST00000295900, 	-1:UnSpec, 	-1:UnSpec, 	MSERAADDVRGEPRRAAAAAGGAAAAAARQQQQQQQQQQPPPPQPQRQQHPPPPPRRTRPEDGGPGAASTSAAAMATVGERRPLPSPEVMLGQSWNLWVEASKLPGKDGECPRPPPPFTPSRPPPLSSPPPCPPPVTRPLEGQRCYRLLGCGTRRCPHLPRACVSVRHTPGH*:ENST00000295900-UnSpec, 	4:ENST00000295900, 	-1:UnSpec, 	CDS:ENST00000295900, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000295900, 	DOMAIN_UNK:ENST00000295900, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.8044	4661	SRR064286	defuse	6	3	12	12	120565016	120632513	120779133	120806958	-	-	GCN1L1	MSI1	120628101	120785317	ENSG00000089154|	ENSG00000135097|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE	ENST00000300648,	ENST00000257552,	InFrame 	1:ENST00000300648, 	40:ENST00000300648, 	264:ENST00000257552, 	362:ENST00000257552, 	MAADTQVSETLKRFAGKVTTASVKERREILSELGKCVAGKAIPLTAYGPMAAAAAAAAVVRGTGSHPWTMAPPPGSTPSRTGGFLGTTSPGPMAELYGAANQDSGVSSYISAASPAPSTGFGHSLGGPLIATAFTNGYH:ENST00000300648-ENST00000257552, 	2:ENST00000300648, 	12:ENST00000257552, 	CDS:ENST00000300648, 	CDS:ENST00000257552, 	NO_DOMAIN:ENST00000300648, 	Repeat=HEAT 1;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 2;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 3;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 4;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 5;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 6;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 7;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 8;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 9;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 10;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 11;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 12;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 13;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 14;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 15;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 16;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 17;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 18;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 19;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 20;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 21;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 22;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 23;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 24;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 25;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 26;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 27;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 28;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 29;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 30;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 31;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 32;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 33;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 34;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 35;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 36;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 37;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 38;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 39;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 40;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 41;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 42;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 43;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 44;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 45;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 46;Ontology_term=ECO:0000255;evidence=ECO:0000255,Repeat=HEAT 47%3B degenerate;Ontology_term=ECO:0000255;evidence=ECO:0000255,:ENST00000300648, 	NO_DOMAIN:ENST00000257552, 	Domain=RRM 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00176,Domain=RRM 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00176,:ENST00000257552, 
0.0002	4662	SRR064286	defuse	27	117	2	2	47558199	47571656	140582465	140583446	+	-	BCYRN1	AC078851.1	47562593	140650105	ENSG00000236824|	ENSG00000223554|	breast_cancer	SRR064286,SRR064438,	breast_cancer,	NO_KINASE																
0.0003	4663	SRR064287	defuse	6	1	7	10	94285637	94299007	21802407	21814611	+	-	PEG10	C10orf140	94294290	21811184	ENSG00000242265|	ENSG00000180592|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000482108,	ENST00000317413,	 	1:ENST00000482108, 	325:ENST00000482108, 	-1:ENST00000317413, 	-1:ENST00000317413, 	MTERRRDELSEEINNLREKVMKQSEENNNLQSQVQKLTEENTTLREQVEPTPEDEDDDIELRGAAAAAAPPPPIEEECPEDLPEKFDGNPDMLAPFMAQCQIFMEKSTRDFSVDRVRVCFVTSMMTGRAARWASAKLERSHYLMHNYPAFMMEMKHVFEDPQRREVAKRKIRRLRQGMGSVIDYSNAFQMIAQDLDWNEPALIDQYHEGLSDHIQEELSHLEVAKSLSALIGQCIHIERRLARAAAARKPRSPPRALVLPHIASHHQVDPTEPVGGARMRLTQEEKERRRKLNLCLYCGTGGHYADNCPAKASKSSPAGNSPAPL:ENST00000482108-ENST00000317413, 	Intron:ENST00000482108, 	Intron:ENST00000317413, 	3UTR:ENST00000482108, 	5UTR:ENST00000317413, 	Region=Necessary for interaction with ALK1,:ENST00000482108, 	NO_DOMAIN:ENST00000482108, 	DOMAIN_UNK:ENST00000317413, 	DOMAIN_UNK:ENST00000317413, 
0.9650	4664	SRR064287	defuse	5	7	9	9	139388896	139440314	134000948	134110057	-	+	NOTCH1	NUP214	139438476	134062676	ENSG00000148400|	ENSG00000126883|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000277541,	ENST00000451030,ENST00000359428,	InFrame 	1:ENST00000277541, 	46:ENST00000277541, 	1140:ENST00000359428, 1141:ENST00000451030, 	2091:ENST00000451030, 2090:ENST00000359428, 	MPPLLAPLLCLALLPALAARGPRCSQPGETCLNGGKCEAANGTEACVSSVPYSTAKTPHPVLTPVAANQAKQGSLINSLKPSGPTPASGQLSSGDKASGTAKIETAVTSTPSASGQFSKPFSFSPSGTGFNFGIITPTPSSNFTAAQGATPSTKESSQPDAFSSGGGSKPSYEAIPESSPPSGITSASNTTPGEPAASSSRPVAPSGTALSTTSSKLETPPSKLGELLFPSSLAGETLGSFSGLRVGQADDSTKPTNKASSTSLTSTQPTKTSGVPSGFNFTAPPVLGKHTEPPVTSSATTTSVAPPAATSTSSTAVFGSLPVTSAGSSGVISFGGTSLSAGKTSFSFGSQQTNSTVPPSAPPPTTAATPLPTSFPTLSFGSLLSSATTPSLPMSAGRSTEEATSSALPEKPGDSEVSASAASLLEEQQSAQLPQAPPQTSDSVKKEPVLAQPAVSNSGTAASSTSLVALSAEATPATTGVPDARTEAVPPASSFSVPGQTAVTAAAISSAGPVAVETSSTPIASSTTSIVAPGPSAEAAAFGTVTSGSSVFAQPPAASSSSAFNQLTNNTATAPSATPVFGQVAASTAPSLFGQQTGSTASTAAATPQVSSSGFSSPAFGTTAPGVFGQTTFGQASVFGQSASSAASVFSFSQPGFSSVPAFGQPASSTPTSTSGSVFGAASSTSSSSSFSFGQSSPNTGGGLFGQSNAPAFGQSPGFGQGGSVFGGTSAATTTAATSGFSFCQASGFGSSNTGSVFGQAASTGGIVFGQQSSSSSGSVFGSGNTGRGGGFFSGLGGKPSQDAANKNPFSSASGGFGSTATSNTSNLFGNSGAKTFGGFASSSFGEQKPTGTFSSGGGSVASQGFGFSSPNKTGGFGAAPVFGSPPTFGGSPGFGGVPAFGSAPAFTSPLGSTGGKVFGEGTAAASAGGFGFGSSSNTTSFGTLASQNAPTFGSLSQQTSGFGTQSSGFSGFGSGTGGFSFGSNNSSVQGFGGWRS:ENST00000277541-ENST00000451030,ENST00000277541-ENST00000359428, 	2:ENST00000277541, 	25:ENST00000451030,ENST00000359428, 	CDS:ENST00000277541, 	CDS:ENST00000451030,ENST00000359428, 	Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=EGF-like 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,:ENST00000277541, 	Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=EGF-like 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 5%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 6;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 7%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 8%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 9%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 10;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 11%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 12%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 13%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 14%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 15%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 16%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 17%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 18%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 19%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 20;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 21%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 22;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 23%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 24;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 25%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 26;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 27;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 28;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 29;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 30;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 31%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 32%3B calcium-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 33;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 34;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 35;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=EGF-like 36;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Repeat=LNR 1,Repeat=LNR 2,Repeat=LNR 3,Repeat=ANK 1,Repeat=ANK 2,Repeat=ANK 3,Repeat=ANK 4,Repeat=ANK 5,Repeat=ANK 6,Region=Interaction with DLL4;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q07008,Region=Interaction with DLL4;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:Q07008,Region=HIF1AN-binding;Ontology_term=ECO:0000250;evidence=ECO:0000250,Region=HIF1AN-binding;Ontology_term=ECO:0000250;evidence=ECO:0000250,:ENST00000277541, 	NO_DOMAIN:ENST00000451030, Region=11 X 5 AA approximate repeats,Region=18 X 4 AA approximate repeats,Region=11 X 3 AA approximate repeats,:ENST00000359428, 	NO_DOMAIN:ENST00000451030, Repeat=Blade 1,Repeat=Blade 2,Repeat=Blade 3,Repeat=Blade 4,Repeat=Blade 5,Repeat=Blade 6,Repeat=Blade 7,Region=Seven-bladed beta propeller,Region=Leucine-zipper 1,Region=Leucine-zipper 2,:ENST00000359428, 
0.0002	4665	SRR064287	defuse	43	785	22	17	21271714	21308037	33474836	33516364	+	+	CRKL	UNC45B	21265624	33478368	ENSG00000099942|	ENSG00000141161|	breast_cancer	SRR064286,SRR064287,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000268876,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000268876, 	-1:ENST00000268876, 	GF*:UnSpec-ENST00000268876, 	-1:UnSpec, 	Intron:ENST00000268876, 	Intergenic:UnSpec, 	CDS:ENST00000268876, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000268876, 	DOMAIN_UNK:ENST00000268876, 
0.0002	4666	SRR064287	defuse	11	66	10	2	22045466	22292698	133038647	133038738	-	-	DNAJC1	AC097532.1	22040830	133038722	ENSG00000136770|	ENSG00000252318|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE																
0.0002	4667	SRR064287	defuse	6	341	1	2	108113461	108113552	133038647	133038738	-	-	AC114491.2	AC097532.1	108113447	133038634	ENSG00000252194|	ENSG00000252318|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE																
0.0002	4668	SRR064287	defuse	26	36	12	16	20704358	20704522	33961052	33962503	+	-	AC112777.1	NCRNA00273	20704492	33963913	ENSG00000240831|	ENSG00000256642|	breast_cancer	SRR064286,SRR064287,SRR064438,SRR064440,	breast_cancer,	NO_KINASE																
0.0002	4669	SRR064287	defuse	6	9	5	1	71146740	71146942	108113461	108113552	+	-	AC116340.1	AC114491.2	71146742	108113394	ENSG00000239935|	ENSG00000252194|	breast_cancer	SRR064287,SRR064438,	breast_cancer,	NO_KINASE																
0.0002	4670	SRR064287	defuse	34	26	5	9	68128412	68257985	96080481	96108696	-	-	CTC-340D7.1	C9orf129	68167435	96097591	ENSG00000249335|	ENSG00000204352|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000375419,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000375419, 	-1:ENST00000375419, 	TCQPSWCFAQRCSLL*:UnSpec-ENST00000375419, 	-1:UnSpec, 	Intron:ENST00000375419, 	Intergenic:UnSpec, 	CDS:ENST00000375419, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000375419, 	DOMAIN_UNK:ENST00000375419, 
0.0002	4671	SRR064287	defuse	13	82	19	2	24184075	24184165	33050510	33151760	-	+	AC092279.1	AL121656.4	24184150	33141644	ENSG00000251948|	ENSG00000230876|	breast_cancer	SRR064286,SRR064287,SRR064437,	breast_cancer,normal_tissue,	NO_KINASE																
0.0004	4672	SRR064287	defuse	6	1	7	18	134212344	134226160	66340927	66382362	+	-	AKR1B10	TMX3	134221515	66123712	ENSG00000198074|	ENSG00000166479|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000359579,	UnSpec,	FrameShift 	1:ENST00000359579, 	1370:ENST00000359579, 	-1:UnSpec, 	-1:UnSpec, 	MATFVELSTKAKMPIVGLGTWKSPLGKVKEAVKVAIDAGYRHIDCAYVYQNEHEVGEAIQEKIQEKAVKREDLFIVSKLWPTFFERPLVRKAFEKTLKDLKLSYLDVYLIHWPQGFKSGDDLFPKDDKGNAIGGKATFLDAWEVGSQLPLSVLGEKSSVIHEIRMDMNEAMCLMLSNFIIVIF*:ENST00000359579-UnSpec, 	5:ENST00000359579, 	-1:UnSpec, 	CDS:ENST00000359579, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000359579, 	DOMAIN_UNK:ENST00000359579, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0001	4673	SRR064287	defuse	6	1	11	4	61727190	61735132	40812044	41218731	-	-	FTH1	APBB2	61734938	41218474	ENSG00000167996|	ENSG00000163697|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000273550,	UnSpec,	UnSpec 	0:ENST00000273550, 	0:ENST00000273550, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000273550-UnSpec, 	Intron:ENST00000273550, 	Intron:UnSpec, 	5UTR:ENST00000273550, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000273550, 	DOMAIN_UNK:ENST00000273550, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4674	SRR064287	defuse	5	3	21	1	27252861	27543446	565020	566063	-	+	APP	RP5-857K21.8	27423393	565832	ENSG00000142192|	ENSG00000225630|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000346798,	UnSpec,	UnSpec 	1:ENST00000346798, 	195:ENST00000346798, 	-1:UnSpec, 	-1:UnSpec, 	MLPGLALLLLAAWTARALEVPTDGNAGLLAEPQIAMFCGRLNMHMNVQNGKWDSDPSGTKTCIDTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRGRKQCKTHPHFVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLAEESDN:ENST00000346798-UnSpec, 	5:ENST00000346798, 	-1:UnSpec, 	CDS:ENST00000346798, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000346798, 	DOMAIN_UNK:ENST00000346798, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0001	4675	SRR064287	defuse	8	2	11	9	61727190	61735132	140086069	140098645	-	-	FTH1	TPRN	61734963	140094695	ENSG00000167996|	ENSG00000176058|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000273550,	UnSpec,	UnSpec 	0:ENST00000273550, 	0:ENST00000273550, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000273550-UnSpec, 	Intron:ENST00000273550, 	Intron:UnSpec, 	5UTR:ENST00000273550, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000273550, 	DOMAIN_UNK:ENST00000273550, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0004	4676	SRR064287	defuse	6	20	8	X	144099399	144105249	108297361	108297792	+	-	LY6E	RN28S1	144103026	108297448	ENSG00000160932|	ENSG00000226958|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000292494,	UnSpec,	FrameShift 	1:ENST00000292494, 	116:ENST00000292494, 	-1:UnSpec, 	-1:UnSpec, 	MKIFLPVLLAALLGVERASSLMCFSCLNQKSNLYCLKPTICSDQDNYCVTVSASAGIGECQASDRAFLPWPSP*:ENST00000292494-UnSpec, 	4:ENST00000292494, 	-1:UnSpec, 	CDS:ENST00000292494, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000292494, 	DOMAIN_UNK:ENST00000292494, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4677	SRR064287	defuse	6	3	17	4	48939584	48945339	190988796	190990406	-	+	TOB1	DUX4L8	48940642	190988647	ENSG00000141232|	ENSG00000250537|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000268957,	UnSpec,	UnSpec 	1:ENST00000268957, 	245:ENST00000268957, 	-1:UnSpec, 	-1:UnSpec, 	MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERLLKKKYEGHWYPEKPYKGSGFRCIHIGEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNNENGCELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTFTTATFAATKFGSTKMKNSGRSNKVARTSPINLGLNVNDLLKQKAISSSMHSLYGLGLGSQQQPQQQQQ:ENST00000268957-UnSpec, 	3:ENST00000268957, 	-1:UnSpec, 	CDS:ENST00000268957, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000268957, 	DOMAIN_UNK:ENST00000268957, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4678	SRR064287	defuse	7	1	8	10	101698044	101735037	21802407	21814611	-	-	PABPC1	C10orf140	101734022	21811209	ENSG00000070756|	ENSG00000180592|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE																
0.0003	4679	SRR064287	defuse	9	13652	17	8	33474836	33516364	136754586	136754738	+	-	UNC45B	U1.10	33478131	136786084	ENSG00000141161|	ENSG00000199652|	breast_cancer	SRR064287,SRR064438,SRR064440,	breast_cancer,	NO_KINASE	ENST00000268876,	UnSpec,	FrameShift 	1:ENST00000268876, 	423:ENST00000268876, 	-1:UnSpec, 	-1:UnSpec, 	MAEVEAVQLKEEGNRHFQLQDYKAATNSYSQALKLTKDKALLATLYRNRAACGLKTESYVQAASDASRAIDINSSDIKALYRRCQALEHLGKLDQAFKDVQRCATLEPRNQNFQEMLRRLNTSIQEKVSWASSHNPWLPSPSLHS*:ENST00000268876-UnSpec, 	Intron:ENST00000268876, 	-1:UnSpec, 	CDS:ENST00000268876, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000268876, 	DOMAIN_UNK:ENST00000268876, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0003	4680	SRR064287	defuse	5	101	8	19	22446787	22459597	24184075	24184165	+	-	AC037459.4	AC092279.1	22457163	24184164	ENSG00000248235|	ENSG00000251948|	breast_cancer	SRR064287,SRR064438,	breast_cancer,	NO_KINASE	ENST00000430850,	UnSpec,	FrameShift 	1:ENST00000430850, 	2060:ENST00000430850, 	-1:UnSpec, 	-1:UnSpec, 	MDSEGGSLLLDEDSEVFKMLQENREGRAAPRQSSSFRLLQEALEAEERGGTPAFLPSSLSPQSSLPASRALATPPKLHTCEKCSTSIANQAVRIQEGRYRHPGCYTCADCGLNLKMRGHFWVGDELYCEKHARQRYSAPATLSSRA*:ENST00000430850-UnSpec, 	Intron:ENST00000430850, 	-1:UnSpec, 	CDS:ENST00000430850, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000430850, 	DOMAIN_UNK:ENST00000430850, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.1392	4681	SRR064287	defuse	5	1	20	10	2442280	2451499	131934663	131982785	-	+	SNRPB	GLRX3	2451337	131955627	ENSG00000125835|	ENSG00000108010|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000303103,	ENST00000331244,	FrameShift 	-1:ENST00000303103, 	-1:ENST00000303103, 	-1:ENST00000331244, 	-1:ENST00000331244, 	MVAAAPPPPPPPRPYWVRMDLPYSVY*:ENST00000303103-ENST00000331244, 	1:ENST00000303103, 	Intron:ENST00000331244, 	5UTR:ENST00000303103, 	CDS:ENST00000331244, 	DOMAIN_UNK:ENST00000303103, 	DOMAIN_UNK:ENST00000303103, 	NO_DOMAIN:ENST00000331244, 	Domain=Thioredoxin;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00691,Domain=Glutaredoxin 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00686,Domain=Glutaredoxin 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00686,:ENST00000331244, 
0.0002	4682	SRR064287	defuse	9	16	21	21	40556102	40693485	9907194	9968585	-	-	BRWD1	CR392039.1	40665738	9916548	ENSG00000185658|	ENSG00000227328|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000333229,	UnSpec,	UnSpec 	1:ENST00000333229, 	276:ENST00000333229, 	-1:UnSpec, 	-1:UnSpec, 	MAEPSSARRPVPLIESELYFLIARYLSAGPCRRAAQVLVQELEQYQLLPKRLDWEGNEHNRSYEELVLSNKHVAPDHLLQICQRIGPMLDKEIPPSISRVTSLLGAGRQSLLRTAKDCRHTVWKGSAFAALHRGRPPEMPVNYGSPPNLVEIHRGKQLTGCSTFSTAFPGTMYQHIKMHRRILGHLSAVYCVAFDRTGHRIFTGSDDCLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTMIAAGSCDKIIRVWCLRTCAPVAVLQGHTGSITSL:ENST00000333229-UnSpec, 	8:ENST00000333229, 	-1:UnSpec, 	CDS:ENST00000333229, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000333229, 	DOMAIN_UNK:ENST00000333229, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4683	SRR064287	defuse	5	3	5	18	14652050	14653438	45357922	45457515	-	-	CTD-2165H16.1	SMAD2	14652504	45379760	ENSG00000250182|	ENSG00000175387|	breast_cancer	SRR064287,SRR064439,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000262160,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000262160, 	-1:ENST00000262160, 	*:UnSpec-ENST00000262160, 	-1:UnSpec, 	Intron:ENST00000262160, 	Intergenic:UnSpec, 	CDS:ENST00000262160, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000262160, 	DOMAIN_UNK:ENST00000262160, 
0.9408	4684	SRR064287	defuse	22	20	19	19	571310	583492	13106584	13209610	+	+	BSG	NFIX	580782	13135835	ENSG00000172270|	ENSG00000008441|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000333511,	ENST00000380945,ENST00000438869,ENST00000358552,ENST00000264825,ENST00000397661,	InFrame 	1:ENST00000333511, 	264:ENST00000333511, 	8:ENST00000380945,ENST00000358552, 9:ENST00000397661, 17:ENST00000438869, 12:ENST00000264825, 	403:ENST00000264825, 501:ENST00000380945, 510:ENST00000438869, 502:ENST00000397661, 460:ENST00000358552, 	MAAALFVLLGFALLGTHGASGAAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDTCSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRVKWVRAQAVVLVLEPGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKDEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDSSNQQGDADIKPLPNGHLSFQDCFVTSGVWNVTELVRVSQTPVATASGPNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGRSPAAGSSQSSGWPNDVDAGSPRATASALHFPSTSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQFVCSDGSGQATGQHSQRQAPPLPTGLSASDPGTATF:ENST00000333511-ENST00000264825, MAAALFVLLGFALLGTHGASGAAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDTCSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRVKWVRAQAVVLVLEPGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKDEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDSSNQQGDADIKPLPNGHLSFQDCFVTSGVWNVTELVRVSQTPVATASGPNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGRSPAAGSSQSSGWPNDVDAGSPRATASALHFPSTSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQFVCSDGSGQATGQPNGSGQGKVPGSFLLPPPPPVARPVPLPMPDSKSTSTAPDGAALTPPSPSFATTGASSANRFVSIGPRDGNFLNIPQQSQSWFL:ENST00000333511-ENST00000358552, MAAALFVLLGFALLGTHGASGAAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDTCSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRVKWVRAQAVVLVLEPGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKDEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKPEIKQKWASRLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPESGQSDSSNQQGDADIKPLPNGHLSFQDCFVTSGVWNVTELVRVSQTPVATASGPNFSLADLESPSYYNINQVTLGRRSITSPPSTSTTKRPKSIDDSEMESPVDDVFYPGTGRSPAAGSSQSSGWPNDVDAGPASLKKSGKLDFCSALSSQGSSPRMAFTHHPLPVLAGVRPGSPRATASALHFPSTSIIQQSSPYFTHPTIRYHHHHGQDSLKEFVQFVCSDGSGQATGQPNGSGQGKVPGSFLLPPPPPVARPVPLPMPDSKSTSTAPDGAALTPPSPSFATTGASSANRFVSIGPRDGNFLNIPQQSQSWFL:ENST00000333511-ENST00000438869,ENST00000333511-ENST00000397661,ENST00000333511-ENST00000380945, 	5:ENST00000333511, 	1:ENST00000380945,ENST00000358552, 2:ENST00000438869,ENST00000264825,ENST00000397661, 	CDS:ENST00000333511, 	CDS:ENST00000380945,ENST00000438869,ENST00000358552,ENST00000264825,ENST00000397661, 	Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=Ig-like C2-type,Domain=Ig-like V-type,:ENST00000333511, 	Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,:ENST00000333511, 	Domain=CTF/NF-I DNA-binding;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS51080,:ENST00000358552, NO_DOMAIN:ENST00000380945,ENST00000438869,ENST00000264825,ENST00000397661, 	NO_DOMAIN:ENST00000380945,ENST00000438869,ENST00000358552,ENST00000264825,ENST00000397661, 
0.5700	4685	SRR064287	defuse	5	25	7	11	5566782	5603415	114392437	114430617	-	-	ACTB	FAM55A	5567246	114411429	ENSG00000075624|	ENSG00000095110|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000331789,	ENST00000424269,	InFrame 	1:ENST00000331789, 	375:ENST00000331789, 	-1:ENST00000424269, 	-1:ENST00000424269, 	MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF:ENST00000331789-ENST00000424269, 	Intron:ENST00000331789, 	Intron:ENST00000424269, 	3UTR:ENST00000331789, 	CDS:ENST00000424269, 	NO_DOMAIN:ENST00000331789, 	NO_DOMAIN:ENST00000331789, 	DOMAIN_UNK:ENST00000424269, 	DOMAIN_UNK:ENST00000424269, 
0.0002	4686	SRR064287	defuse	5	2	2	17	61704984	61765761	38632080	38657854	-	-	XPO1	TNS4	61764808	38632662	ENSG00000082898|	ENSG00000131746|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE																
0.0002	4687	SRR064287	defuse	5	4	1	2	536816	659930	107313787	107315132	-	-	RP5-857K21.4	EEF1A1P12	569317	107314210	ENSG00000230021|	ENSG00000214199|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE																
0.0002	4688	SRR064287	defuse	7	5	2	1	78825037	78826532	91726323	91870426	+	-	AC092660.1	HFM1	78928945	91853110	ENSG00000234877|	ENSG00000162669|	breast_cancer	SRR064287,SRR064438,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000370421,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000370421, 	-1:ENST00000370421, 	VHLSNGNAGVLRRAQGGQKPPVEQKGKSSLDLDFQYEYRP*:UnSpec-ENST00000370421, 	-1:UnSpec, 	Intron:ENST00000370421, 	Intergenic:UnSpec, 	CDS:ENST00000370421, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:ENST00000370421, 
0.0002	4689	SRR064287	defuse	5	11	17	8	7760005	7761172	687651	1087777	-	+	LSMD1	CTD-3212A4.1	7760515	923661	ENSG00000183011|	ENSG00000237647|	breast_cancer	SRR064287,SRR064441,	breast_cancer,	NO_KINASE	ENST00000333775,	UnSpec,	UnSpec 	1:ENST00000333775, 	75:ENST00000333775, 	-1:UnSpec, 	-1:UnSpec, 	MAVAVGVRAAPVLGLARALVLGLRGSQAARWRGWGTAAPGSLWALCECPAGCRELWFRGRAAWAARSERLLHPAQ:ENST00000333775-UnSpec, 	1:ENST00000333775, 	-1:UnSpec, 	CDS:ENST00000333775, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000333775, 	DOMAIN_UNK:ENST00000333775, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0004	4690	SRR064287	defuse	106	4988	17	11	33474836	33516364	83166055	85338966	+	-	UNC45B	DLG2	33478117	85195042	ENSG00000141161|	ENSG00000150672|	breast_cancer	SRR064286,SRR064287,SRR064438,SRR064440,	breast_cancer,	NO_KINASE	ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570,	ENST00000376104,	FrameShift 	1:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	418:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	-1:ENST00000376104, 	-1:ENST00000376104, 	MAEVEAVQLKEEGNRHFQLQDYKAATNSYSQALKLTKDKALLATLYRNRAACGLKTESYVQAASDASRAIDINSSDIKALYRRCQALEHLGKLDQAFKDVQRCATLEPRNQNFQEMLRRLNTSIQEKVSWASSHNPWLPSPSLHS*:ENST00000268876-ENST00000376104,ENST00000433649-ENST00000376104,ENST00000378449-ENST00000376104,ENST00000394570-ENST00000376104, 	Intron:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	Intron:ENST00000376104, 	CDS:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	CDS:ENST00000376104, 	NO_DOMAIN:ENST00000378449,ENST00000433649,ENST00000268876, Repeat=TPR 1,Repeat=TPR 2,Repeat=TPR 3,Repeat=ARM 1,Repeat=ARM 2,:ENST00000394570, 	NO_DOMAIN:ENST00000378449,ENST00000433649, Repeat=ARM 3,:ENST00000394570, Repeat=TPR 1,Repeat=TPR 2,Repeat=TPR 3,Repeat=ARM 1,Repeat=ARM 2,Repeat=ARM 3,:ENST00000268876, 	NO_DOMAIN:ENST00000376104, 	Domain=PDZ 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=PDZ 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=PDZ 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=SH3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00192,Domain=Guanylate kinase-like;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00100,:ENST00000376104, 
0.0003	4691	SRR064287	defuse	5	1	5	4	69345350	69374349	190988796	190990406	+	+	SMN2	DUX4L8	69365110	190988654	ENSG00000205571|	ENSG00000250537|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000380742,	UnSpec,	FrameShift 	1:ENST00000380742, 	821:ENST00000380742, 	-1:UnSpec, 	-1:UnSpec, 	MAMSSGGSGGGVPEQEDSVLFRRGTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDICETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKVNLL*:ENST00000380742-UnSpec, 	Intron:ENST00000380742, 	-1:UnSpec, 	CDS:ENST00000380742, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000380742, 	DOMAIN_UNK:ENST00000380742, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0004	4692	SRR064287	defuse	63	4988	17	11	33474836	33516364	83166055	85338966	+	-	UNC45B	DLG2	33478117	85195042	ENSG00000141161|	ENSG00000150672|	breast_cancer	SRR064286,SRR064287,SRR064438,SRR064440,	breast_cancer,	NO_KINASE	ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570,	ENST00000376104,	FrameShift 	1:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	418:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	-1:ENST00000376104, 	-1:ENST00000376104, 	MAEVEAVQLKEEGNRHFQLQDYKAATNSYSQALKLTKDKALLATLYRNRAACGLKTESYVQAASDASRAIDINSSDIKALYRRCQALEHLGKLDQAFKDVQRCATLEPRNQNFQEMLRRLNTSIQEKVSWASSHNPWLPSPSLHS*:ENST00000268876-ENST00000376104,ENST00000433649-ENST00000376104,ENST00000378449-ENST00000376104,ENST00000394570-ENST00000376104, 	Intron:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	Intron:ENST00000376104, 	CDS:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	CDS:ENST00000376104, 	NO_DOMAIN:ENST00000378449,ENST00000433649,ENST00000268876, Repeat=TPR 1,Repeat=TPR 2,Repeat=TPR 3,Repeat=ARM 1,Repeat=ARM 2,:ENST00000394570, 	NO_DOMAIN:ENST00000378449,ENST00000433649, Repeat=ARM 3,:ENST00000394570, Repeat=TPR 1,Repeat=TPR 2,Repeat=TPR 3,Repeat=ARM 1,Repeat=ARM 2,Repeat=ARM 3,:ENST00000268876, 	NO_DOMAIN:ENST00000376104, 	Domain=PDZ 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=PDZ 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=PDZ 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=SH3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00192,Domain=Guanylate kinase-like;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00100,:ENST00000376104, 
0.0004	4693	SRR064287	defuse	11	3	X	X	7137497	7272851	7109925	7116648	+	+	STS	AC073583.1	7171238	7109050	ENSG00000101846|	ENSG00000256996|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000217961,	UnSpec,	FrameShift 	1:ENST00000217961, 	11174:ENST00000217961, 	-1:UnSpec, 	-1:UnSpec, 	MPLR*:ENST00000217961-UnSpec, 	2:ENST00000217961, 	-1:UnSpec, 	CDS:ENST00000217961, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000217961, 	DOMAIN_UNK:ENST00000217961, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4694	SRR064287	defuse	54	34	12	9	34372314	34372611	79186649	79186950	-	+	AC140847.1	AL161626.1	34372509	79186656	ENSG00000243092|	ENSG00000241781|	breast_cancer	SRR064287,SRR064438,SRR064440,	breast_cancer,	NO_KINASE																
0.0004	4695	SRR064287	defuse	5	1	4	2	39699664	39784412	33050510	33151760	+	+	UBE2K	AL121656.4	39739046	33141363	ENSG00000078140|	ENSG00000230876|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000261427,	UnSpec,	FrameShift 	1:ENST00000261427, 	13033:ENST00000261427, 	-1:UnSpec, 	-1:UnSpec, 	MANIAVQRIKREFKEVLKSEEVRNELPDIPHLCLGREGPPSCDPDIPGSPWVVLLAAALLPVRKQQCSPPPSAAFPSPPRALGWTVSRAGGLGWNMVWGGDGQGATPRRDGSSQENPRRWPQLEMWLWGGEGAGRA*:ENST00000261427-UnSpec, 	2:ENST00000261427, 	-1:UnSpec, 	CDS:ENST00000261427, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000261427, 	DOMAIN_UNK:ENST00000261427, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4696	SRR064287	defuse	9	2	1	2	536816	659930	132905164	133015542	-	-	RP5-857K21.4	ANKRD30BL	568488	133012871	ENSG00000230021|	ENSG00000163046|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE																
0.0002	4697	SRR064287	defuse	7	6	12	12	123773656	123834988	123849500	123850660	-	+	SBNO1	RP13-942N8.1	123834988	123849248	ENSG00000139697|	ENSG00000256092|	breast_cancer	SRR064287,SRR064438,SRR064439,SRR064441,	breast_cancer,	NO_KINASE	ENST00000267176,	UnSpec,	UnSpec 	1:ENST00000267176, 	0:ENST00000267176, 	-1:UnSpec, 	-1:UnSpec, 	:ENST00000267176-UnSpec, 	1:ENST00000267176, 	-1:UnSpec, 	CDS:ENST00000267176, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000267176, 	DOMAIN_UNK:ENST00000267176, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4698	SRR064287	defuse	5	11	19	8	24184075	24184165	70584568	70747299	-	-	AC092279.1	SLCO5A1	24183753	70602328	ENSG00000251948|	ENSG00000137571|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000260126,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000260126, 	-1:ENST00000260126, 	*:UnSpec-ENST00000260126, 	-1:UnSpec, 	Intron:ENST00000260126, 	Intergenic:UnSpec, 	CDS:ENST00000260126, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000260126, 	DOMAIN_UNK:ENST00000260126, 
0.0002	4699	SRR064287	defuse	6	24	1	8	536816	659930	70584568	70747299	-	-	RP5-857K21.4	SLCO5A1	570103	70602525	ENSG00000230021|	ENSG00000137571|	breast_cancer	SRR064287,SRR064438,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000260126,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000260126, 	-1:ENST00000260126, 	GSNYDSLKVAKCLVI*:UnSpec-ENST00000260126, 	-1:UnSpec, 	Intron:ENST00000260126, 	Intergenic:UnSpec, 	CDS:ENST00000260126, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000260126, 	DOMAIN_UNK:ENST00000260126, 
0.0002	4700	SRR064287	defuse	5	21	9	2	79186649	79186950	159313476	159539391	+	+	AL161626.1	PKP4	79186659	159440688	ENSG00000241781|	ENSG00000144283|	breast_cancer	SRR064287,SRR064438,	breast_cancer,	NO_KINASE																
0.0002	4701	SRR064287	defuse	5	166	3	19	53258723	53290068	24184075	24184165	-	-	TKT	AC092279.1	53263324	24184151	ENSG00000163931|	ENSG00000251948|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	ENST00000296289,	UnSpec,	UnSpec 	1:ENST00000296289, 	147:ENST00000296289, 	-1:UnSpec, 	-1:UnSpec, 	MAEQIIQEIYSQIQSKKKILATPPQEDAPSVDIANIRMPSLPSYKVGDKIATRKAYGQALAKLGHASDRIIALDGDTKNSTFSEIFKKEHPDRFIECYIAEQNMVSIAVGCATRNRTVPFCSTFAAFFTRAFDQIRMAAISESNINL:ENST00000296289-UnSpec, 	9:ENST00000296289, 	-1:UnSpec, 	CDS:ENST00000296289, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000296289, 	DOMAIN_UNK:ENST00000296289, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4702	SRR064287	defuse	5	12	18	11	2655886	2805015	92069038	92069662	+	-	SMCHD1	NDUFB11P1	2707918	91996466	ENSG00000101596|	ENSG00000235547|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE																
0.0003	4703	SRR064287	defuse	14	5504	17	21	33474836	33516364	35445892	35732332	+	+	UNC45B	AP000318.2	33478117	35677489	ENSG00000141161|	ENSG00000214955|	breast_cancer	SRR064287,SRR064438,SRR064441,	breast_cancer,	NO_KINASE	ENST00000268876,	UnSpec,	FrameShift 	1:ENST00000268876, 	418:ENST00000268876, 	-1:UnSpec, 	-1:UnSpec, 	MAEVEAVQLKEEGNRHFQLQDYKAATNSYSQALKLTKDKALLATLYRNRAACGLKTESYVQAASDASRAIDINSSDIKALYRRCQALEHLGKLDQAFKDVQRCATLEPRNQNFQEMLRRLNTSIQEKVSWASSHNPWLPSPSLHS*:ENST00000268876-UnSpec, 	Intron:ENST00000268876, 	-1:UnSpec, 	CDS:ENST00000268876, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000268876, 	DOMAIN_UNK:ENST00000268876, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0022	4704	SRR064287	defuse	10	2	1	13	565020	566063	82264203	82264535	+	+	RP5-857K21.8	PTMAP5	565881	82264404	ENSG00000225630|	ENSG00000214182|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000393073,	InFrame 	-1:UnSpec, 	-1:UnSpec, 	67:ENST00000393073, 	110:ENST00000393073, 	EGDGEEEDGDEDEEAESPTGKRAAEDDEDDDVDTKKQKTDEDD:UnSpec-ENST00000393073, 	-1:UnSpec, 	1:ENST00000393073, 	Intergenic:UnSpec, 	CDS:ENST00000393073, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000393073, 	DOMAIN_UNK:ENST00000393073, 
0.0002	4765	SRR064438	defuse	5	27	8	1	70584568	70747299	91726323	91870426	-	-	SLCO5A1	HFM1	70602489	91853265	ENSG00000137571|	ENSG00000162669|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000260126,	ENST00000370424,ENST00000370425,ENST00000370421,	FrameShift 	1:ENST00000260126, 	5466:ENST00000260126, 	-1:ENST00000370424,ENST00000370425,ENST00000370421, 	-1:ENST00000370424,ENST00000370425,ENST00000370421, 	MDEGTGLQPGAGEQLEAPATAEAVQERCEPETLRSKSLPVLSSASCRPSLSPTSGDANPAFGCVDSSGHQELKQGPNPLAPSPSAPSTSAGLGDCNHRVDLSKTFSVSSALAMLQERRCLYVVLTDSRCFLVCMCFLTFIQALMVSGYLSSVITTIERRYSLKSSESGLLVSCFDIGNLVVVVFVSYFGGRGRRPLWLAVGGLLIAFGAALFALPHFISPPYQIQELNASAPNDGLCQGGNSTATLEPPACPKDSGGNNHWVYVALFICAQILIGMGSTPIYTLGPTYLDDNVKKENSSLYLAIMYVMGALGPAVGYLLGGLLIGFYVDPRNPVHLDQNDPRFIGNWWSGFLLCAIAMFLVIFPMFTFPKKLPPRHKKKKKKKFSVDAVSDDDVLKEKSNNSEQADKKVSSMGFGKDVRDLPRAAVRILSNMTFLFVSLSYTAESAIVTAFITFIPKFIESQFGIPASNASIYTGVIIVPSAGVGIVLGGYIIKKLKLGARESAKLAMICSGVSLLCFSTLFIVGCESINLGGINIPYTTG*:ENST00000260126-ENST00000370425,ENST00000260126-ENST00000370424,ENST00000260126-ENST00000370421, 	Intron:ENST00000260126, 	Intron:ENST00000370424,ENST00000370425,ENST00000370421, 	CDS:ENST00000260126, 	CDS:ENST00000370424,ENST00000370425,ENST00000370421, 	Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=Kazal-like;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00798,:ENST00000260126, 	NO_DOMAIN:ENST00000260126, 	NO_DOMAIN:ENST00000370424,ENST00000370425,ENST00000370421, 	Domain=Helicase ATP-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00541,Domain=Helicase C-terminal;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00542,Domain=SEC63,:ENST00000370425, NO_DOMAIN:ENST00000370424,ENST00000370421, 
0.0002	4766	SRR064438	defuse	10	16	MT	MT	9207	9990	12337	14148	+	+	MT-CO3	MT-ND5	9279	12763	ENSG00000198938|	ENSG00000198786|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0003	4767	SRR064438	defuse	22	11120	17	21	33474836	33516364	35445892	35732332	+	+	UNC45B	AP000318.2	33478117	35677489	ENSG00000141161|	ENSG00000214955|	breast_cancer	SRR064287,SRR064438,SRR064441,	breast_cancer,	NO_KINASE	ENST00000268876,	UnSpec,	FrameShift 	1:ENST00000268876, 	418:ENST00000268876, 	-1:UnSpec, 	-1:UnSpec, 	MAEVEAVQLKEEGNRHFQLQDYKAATNSYSQALKLTKDKALLATLYRNRAACGLKTESYVQAASDASRAIDINSSDIKALYRRCQALEHLGKLDQAFKDVQRCATLEPRNQNFQEMLRRLNTSIQEKVSWASSHNPWLPSPSLHS*:ENST00000268876-UnSpec, 	Intron:ENST00000268876, 	-1:UnSpec, 	CDS:ENST00000268876, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000268876, 	DOMAIN_UNK:ENST00000268876, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0003	4768	SRR064438	defuse	5	13	17	17	37617739	37690800	37702357	37702497	+	-	CDK12	U6.891	37687273	37700501	ENSG00000167258|	ENSG00000222777|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	5p_KINASE																
0.0002	4769	SRR064438	defuse	6	32	1	1	536816	659930	91726323	91870426	-	-	RP5-857K21.4	HFM1	570029	91853189	ENSG00000230021|	ENSG00000162669|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000370421,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000370421, 	-1:ENST00000370421, 	NFIHVPTKDMNSSFPGTVPGGEFDWGCTPVKR*:UnSpec-ENST00000370421, 	-1:UnSpec, 	Intron:ENST00000370421, 	Intergenic:UnSpec, 	CDS:ENST00000370421, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:ENST00000370421, 
0.0189	4770	SRR064438	defuse	5	7	20	20	57226328	57254582	55926066	55954267	+	+	STX16	RAE1	57227143	55929088	ENSG00000124222|	ENSG00000101146|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000355957,	ENST00000371242,	FrameShift 	1:ENST00000355957, 	27:ENST00000355957, 	-1:ENST00000371242, 	-1:ENST00000371242, 	MATRRLTDAFLLLRNNSIQNRQLLAEQVQNEPVWNNLRFWNQWDQHVWQCNYRQSQSHEGY*:ENST00000355957-ENST00000371242, 	1:ENST00000355957, 	-1:ENST00000371242, 	CDS:ENST00000355957, 	5UTR:ENST00000371242, 	DOMAIN_UNK:ENST00000355957, 	DOMAIN_UNK:ENST00000355957, 	DOMAIN_UNK:ENST00000371242, 	DOMAIN_UNK:ENST00000371242, 
0.0002	4771	SRR064438	defuse	7	46	MT	MT	12337	14148	9207	9990	+	+	MT-ND5	MT-CO3	14014	9478	ENSG00000198786|	ENSG00000198938|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0002	4772	SRR064438	defuse	8	304	5	2	71146740	71146942	133038647	133038738	+	-	AC116340.1	AC097532.1	71146938	133038267	ENSG00000239935|	ENSG00000252318|	breast_cancer	SRR064438,SRR064440,SRR064441,	breast_cancer,	NO_KINASE																
0.0002	4773	SRR064438	defuse	10	3	1	5	565020	566063	118309491	118309817	+	+	RP5-857K21.8	CTB-161M19.3	565881	118309689	ENSG00000225630|	ENSG00000197744|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0002	4774	SRR064438	defuse	6	13	17	5	37004118	37010064	103718999	104728671	-	-	RPL23	RP11-6N13.1	37004290	104672141	ENSG00000125691|	ENSG00000251574|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000394333,	UnSpec,	UnSpec 	1:ENST00000394333, 	82:ENST00000394333, 	-1:UnSpec, 	-1:UnSpec, 	MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPELRKKVLLCHTG:ENST00000394333-UnSpec, 	4:ENST00000394333, 	-1:UnSpec, 	CDS:ENST00000394333, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000394333, 	DOMAIN_UNK:ENST00000394333, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.3124	4775	SRR064438	defuse	10	10	1	4	247002400	247095280	76831809	76862204	-	-	AHCTF1	NAAA	247094880	76846964	ENSG00000153207|	ENSG00000138744|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000478568,	ENST00000286733,	FrameShift 	-1:ENST00000478568, 	-1:ENST00000478568, 	-1:ENST00000286733, 	-1:ENST00000286733, 	MRRAGPALSEASRQRCKGKDPEARREQRLRFSR*:ENST00000478568-ENST00000286733, 	1:ENST00000478568, 	5:ENST00000286733, 	5UTR:ENST00000478568, 	CDS:ENST00000286733, 	DOMAIN_UNK:ENST00000478568, 	DOMAIN_UNK:ENST00000478568, 	NO_DOMAIN:ENST00000286733, 	NO_DOMAIN:ENST00000286733, 
0.0004	4776	SRR064438	defuse	10	14	17	20	37913968	38020441	56964178	57026157	-	+	IKZF3	VAPB	37934020	56964573	ENSG00000161405|	ENSG00000124164|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000351680,ENST00000346872,ENST00000488188,	ENST00000520497,ENST00000475243,ENST00000395802,	FrameShift 	1:ENST00000351680,ENST00000346872,ENST00000488188, 	197:ENST00000351680, 141:ENST00000346872, 236:ENST00000488188, 	-1:ENST00000520497,ENST00000475243,ENST00000395802, 	-1:ENST00000520497,ENST00000475243,ENST00000395802, 	MEDIQTNAELKSTQEQSVPAESAAVLNDYSLTKSHEMENVDSGEGPANEDEDIGDDSMKVKDEYSERDENVLKSEPMGNAEEPEIPYSYSREYNEYENIKLERHVVSFDSSRPTSGKMNCDVCGLSCISFNVLMVHKRSHTGERPFQCNQCGASFTQKGNLLRHIKLHTGEKPFKCHLCNYACQRRDALTGHLRTHSVEKPYKCEFCGRSYKQRSSLEEHKERCRTFLQSTDPGDTAVPSPMLSPPT*:ENST00000488188-ENST00000520497,ENST00000488188-ENST00000395802,ENST00000488188-ENST00000475243, MEDIQTNAELKSTQEQSVPAESAAVLNDYSLTKSHEMENVDSGEGPANEDEDIGDDSMKVKDEYSERDENVLKSEPMGNAEEPEIPYSYSREYNEYENIKLERHVVSFDSSRPTSGKMNCDVCGLSCISFNVLMVHKRSHTGERPFQCNQCGASFTQKGNLLRHIKLHTGEKPFKCHLCNYACQRRDALTGHLRTHSAVPSPMLSPPT*:ENST00000351680-ENST00000395802,ENST00000351680-ENST00000520497,ENST00000351680-ENST00000475243, MEDIQTNAELKSTQEQSVPAESAAVLNDYSLTKSHEMENVDSGEGPANEDEDIGDDSMKVKDEYSERDENVLKSEPMGNAEEPEIPYSYSREYNEYENIKLERHVVSFDSSRPTSGKMNCDVCGLSCISFNVLMVHKRSHTAVPSPMLSPPT*:ENST00000346872-ENST00000395802,ENST00000346872-ENST00000475243,ENST00000346872-ENST00000520497, 	6:ENST00000351680, 7:ENST00000488188, 5:ENST00000346872, 	1:ENST00000520497,ENST00000475243,ENST00000395802, 	CDS:ENST00000351680,ENST00000346872,ENST00000488188, 	CDS:ENST00000520497,ENST00000475243,ENST00000395802, 	NO_DOMAIN:ENST00000351680,ENST00000346872,ENST00000488188, 	NO_DOMAIN:ENST00000351680,ENST00000346872,ENST00000488188, 	NO_DOMAIN:ENST00000520497,ENST00000475243,ENST00000395802, 	Domain=MSP;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50202,:ENST00000520497, Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=MSP;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00132,:ENST00000475243,ENST00000395802, 
0.0002	4777	SRR064438	defuse	5	4	1	2	566454	567996	132905164	133015542	+	-	RP5-857K21.6	ANKRD30BL	567065	133012929	ENSG00000237973|	ENSG00000163046|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0002	4778	SRR064438	defuse	11	66	1	8	566454	567996	70584568	70747299	+	-	RP5-857K21.6	SLCO5A1	566995	70602524	ENSG00000237973|	ENSG00000137571|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000260126,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000260126, 	-1:ENST00000260126, 	GVTMTLLR*:UnSpec-ENST00000260126, 	-1:UnSpec, 	Intron:ENST00000260126, 	Intergenic:UnSpec, 	CDS:ENST00000260126, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000260126, 	DOMAIN_UNK:ENST00000260126, 
0.0005	4779	SRR064438	defuse	9	27	17	17	48939584	48945339	35874900	35969488	-	-	TOB1	SYNRG	48943419	35880751	ENSG00000141232|	ENSG00000006114|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000268957,	ENST00000339208,	FrameShift 	-1:ENST00000268957, 	-1:ENST00000268957, 	-1:ENST00000339208, 	-1:ENST00000339208, 	MYGGFVPEEHSWSTRARPVDTLLLDFPLFPVRV*:ENST00000268957-ENST00000339208, 	Intron:ENST00000268957, 	19:ENST00000339208, 	5UTR:ENST00000268957, 	CDS:ENST00000339208, 	DOMAIN_UNK:ENST00000268957, 	DOMAIN_UNK:ENST00000268957, 	NO_DOMAIN:ENST00000339208, 	NO_DOMAIN:ENST00000339208, 
0.0002	4780	SRR064438	defuse	6	13506	19	17	24187160	24187309	33474836	33516364	-	+	5_8S_rRNA.4	UNC45B	24186054	33478117	ENSG00000201966|	ENSG00000141161|	breast_cancer	SRR064286,SRR064438,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000268876,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000268876, 	-1:ENST00000268876, 	VRHISRAPPRGGDSALGSSLFTRHY*:UnSpec-ENST00000268876, 	-1:UnSpec, 	Intron:ENST00000268876, 	Intergenic:UnSpec, 	CDS:ENST00000268876, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000268876, 	DOMAIN_UNK:ENST00000268876, 
0.0002	4781	SRR064438	defuse	6	19	16	20	33961052	33962503	26167655	26189869	-	-	NCRNA00273	RP3-410C9.1	33961280	26189309	ENSG00000256642|	ENSG00000227195|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0002	4782	SRR064438	defuse	5	3	1	1	565020	566063	54440648	54441772	+	-	RP5-857K21.8	RP1-167A19.5	565846	54440958	ENSG00000225630|	ENSG00000219102|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.1392	4783	SRR064438	defuse	5	2	20	10	2442280	2451499	131934663	131982785	-	+	SNRPB	GLRX3	2451398	131955774	ENSG00000125835|	ENSG00000108010|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000303103,	ENST00000331244,	FrameShift 	-1:ENST00000303103, 	-1:ENST00000303103, 	-1:ENST00000331244, 	-1:ENST00000331244, 	MDLPYSVY*:ENST00000303103-ENST00000331244, 	1:ENST00000303103, 	Intron:ENST00000331244, 	5UTR:ENST00000303103, 	CDS:ENST00000331244, 	DOMAIN_UNK:ENST00000303103, 	DOMAIN_UNK:ENST00000303103, 	NO_DOMAIN:ENST00000331244, 	Domain=Thioredoxin;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00691,Domain=Glutaredoxin 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00686,Domain=Glutaredoxin 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00686,:ENST00000331244, 
0.0002	4784	SRR064438	defuse	25	58	12	16	20704358	20704522	33961052	33962503	+	-	AC112777.1	NCRNA00273	20704492	33963913	ENSG00000240831|	ENSG00000256642|	breast_cancer	SRR064286,SRR064287,SRR064438,SRR064440,	breast_cancer,	NO_KINASE																
0.0001	4785	SRR064438	defuse	6	5	17	1	16284113	16286054	566454	567996	+	+	UBB	RP5-857K21.6	16284434	566980	ENSG00000170315|	ENSG00000237973|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000302182,	UnSpec,	UnSpec 	0:ENST00000302182, 	0:ENST00000302182, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000302182-UnSpec, 	Intron:ENST00000302182, 	Intron:UnSpec, 	5UTR:ENST00000302182, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000302182, 	DOMAIN_UNK:ENST00000302182, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4786	SRR064438	defuse	6	12	2	1	78825037	78826532	91726323	91870426	+	-	AC092660.1	HFM1	78928945	91853110	ENSG00000234877|	ENSG00000162669|	breast_cancer	SRR064287,SRR064438,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000370421,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000370421, 	-1:ENST00000370421, 	VHLSNGNAGVLRRAQGGQKPPVEQKGKSSLDLDFQYEYRP*:UnSpec-ENST00000370421, 	-1:UnSpec, 	Intron:ENST00000370421, 	Intergenic:UnSpec, 	CDS:ENST00000370421, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:ENST00000370421, 
0.0002	4787	SRR064438	defuse	8	274	1	19	536816	659930	24184075	24184165	-	-	RP5-857K21.4	AC092279.1	569479	24184160	ENSG00000230021|	ENSG00000251948|	breast_cancer	SRR064438,SRR064441,	breast_cancer,	NO_KINASE																
0.0002	4788	SRR064438	defuse	7	2	2	17	217536828	217560248	36861795	36886056	-	+	IGFBP5	MLLT6	217537062	36886032	ENSG00000115461|	ENSG00000108292|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0002	4789	SRR064438	defuse	5	4	10	10	81420645	81436855	88963610	89102369	+	-	RP11-506M13.3	RP11-322M19.1	81430889	89048252	ENSG00000244733|	ENSG00000223482|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0001	4790	SRR064438	defuse	8	2	20	18	2442280	2451499	56133495	56133559	-	-	SNRPB	AC105105.1	2451398	56127640	ENSG00000125835|	ENSG00000252330|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000303103,	UnSpec,	UnSpec 	0:ENST00000303103, 	0:ENST00000303103, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000303103-UnSpec, 	Intron:ENST00000303103, 	Intron:UnSpec, 	5UTR:ENST00000303103, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000303103, 	DOMAIN_UNK:ENST00000303103, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.1392	4791	SRR064438	defuse	6	5	11	11	68228186	68382802	70313961	70963623	+	-	PPP6R3	SHANK2	68228292	70803331	ENSG00000110075|	ENSG00000162105|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000265636,	ENST00000338508,	FrameShift 	-1:ENST00000265636, 	-1:ENST00000265636, 	-1:ENST00000338508, 	-1:ENST00000338508, 	MVSVSAFPA*:ENST00000265636-ENST00000338508, 	1:ENST00000265636, 	Intron:ENST00000338508, 	5UTR:ENST00000265636, 	CDS:ENST00000338508, 	DOMAIN_UNK:ENST00000265636, 	DOMAIN_UNK:ENST00000265636, 	NO_DOMAIN:ENST00000338508, 	Domain=PDZ (DHR);Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50106,Domain=SAM (sterile alpha motif);Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50105,:ENST00000338508, 
0.0002	4792	SRR064438	defuse	33	112	19	5	24184075	24184165	71146740	71146942	-	+	AC092279.1	AC116340.1	24183757	71146921	ENSG00000251948|	ENSG00000239935|	breast_cancer	SRR064438,SRR064440,	breast_cancer,	NO_KINASE																
0.0003	4793	SRR064438	defuse	6	49	1	X	91726323	91870426	108297361	108297792	-	-	HFM1	RN28S1	91853148	108297823	ENSG00000162669|	ENSG00000226958|	breast_cancer	SRR064438,SRR064440,	breast_cancer,	NO_KINASE	ENST00000370421,	UnSpec,	FrameShift 	1:ENST00000370421, 	2332:ENST00000370421, 	-1:UnSpec, 	-1:UnSpec, 	MLKSNDCLFSLENLFFEKPDEVENHPDNEKSLDWFLPPAPLISEIPDTQELEEELESHKLLGQEKRPKMLTSNLKITNEDTNYISLTQKFQFAFPSDKYEQDDLNLEGVGNNDLSHIAGKLTYASQKYKNHIGTEIAPEKSVPDDTKLVNFAEDKGESTSVFRKR*:ENST00000370421-UnSpec, 	Intron:ENST00000370421, 	-1:UnSpec, 	CDS:ENST00000370421, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4794	SRR064438	defuse	5	634	1	2	536816	659930	133038647	133038738	-	-	RP5-857K21.4	AC097532.1	568475	133038723	ENSG00000230021|	ENSG00000252318|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0002	4795	SRR064438	defuse	22	375	19	2	24184075	24184165	133038647	133038738	-	-	AC092279.1	AC097532.1	24184079	133038650	ENSG00000251948|	ENSG00000252318|	breast_cancer	SRR064438,SRR064440,	breast_cancer,	NO_KINASE																
0.0002	4796	SRR064438	defuse	8	12	1	5	536816	659930	14652050	14653438	-	-	RP5-857K21.4	CTD-2165H16.1	569161	14652441	ENSG00000230021|	ENSG00000250182|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0002	4797	SRR064438	defuse	9	1193	19	22	24184075	24184165	50432942	50451088	-	-	AC092279.1	IL17REL	24184163	50438053	ENSG00000251948|	ENSG00000188263|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000341280,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000341280, 	-1:ENST00000341280, 	ARPRPHPPPVPAPAPFGAGPAHPRPPPPSRAAPQPPFLGCR*:UnSpec-ENST00000341280, 	-1:UnSpec, 	Intron:ENST00000341280, 	Intergenic:UnSpec, 	CDS:ENST00000341280, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000341280, 	DOMAIN_UNK:ENST00000341280, 
0.5700	4798	SRR064438	defuse	14	3	12	4	106631659	106641908	176554085	176923815	-	-	CKAP4	GPM6A	106631789	176733473	ENSG00000136026|	ENSG00000150625|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000258512,	ENST00000506894,	InFrame 	1:ENST00000258512, 	560:ENST00000258512, 	-1:ENST00000506894, 	-1:ENST00000506894, 	AAGPACVASSPGSARSASLTGRRGRRRGGGGRPPPPASSARPPSPAARPLAASSSASCSRRLGRALNFLFYLALVAAAAFSGWCVHHVLEEVQQVRRSHQDFSRQREELGQGLQGVEQKVQSLQATFGTFESILRSSQHKQDLTEKAVKQGESEVSRISEVLQKLQNEILKDLSDGIHVVKDARERDFTSLENTVEERLTELTKSINDNIAIFTEVQKRSQKEINDMKAKVASLEESEGNKQDLKALKEAVKEIQTSAKSREWDMEALRSTLQTMESDIYTEVRELVSLKQEQQAFKEAADTERLALQALTEKLLRSEESVSRLPEEIRRLEEELRQLKSDSHGPKEDGGFRHSEAFEALQQKSQGLDSRLQHVEDGVLSMQVASARQTESLESLLSKSQEHEQRLAALQGRLEGLGSSEADQDGLASTVRSLGETQLVLYGDVEELKRSVGELPSTVESLQKVQEQVHTLLSQDQAQAARLPPQDFLDRLSSLDNLKASVSQVEADLKMLRTAVDSLVAYSVKIETNENNLESAKGLLDDLRNDLDRLFVKVEKIHEKV:ENST00000258512-ENST00000506894, 	Intron:ENST00000258512, 	Intron:ENST00000506894, 	3UTR:ENST00000258512, 	CDS:ENST00000506894, 	NO_DOMAIN:ENST00000258512, 	NO_DOMAIN:ENST00000258512, 	DOMAIN_UNK:ENST00000506894, 	DOMAIN_UNK:ENST00000506894, 
0.0001	4799	SRR064438	defuse	100	3121	17	11	33474836	33516364	83166055	85338966	+	-	UNC45B	DLG2	33478307	85194852	ENSG00000141161|	ENSG00000150672|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570,	ENST00000376104,	FrameShift 	1:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	482:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	-1:ENST00000376104, 	-1:ENST00000376104, 	MAEVEAVQLKEEGNRHFQLQDYKAATNSYSQALKLTKDKALLATLYRNRAACGLKTESYVQAASDASRAIDINSSDIKALYRRCQALEHLGKLDQAFKDVQRCATLEPRNQNFQEMLRRLNTSIQEKVSWASSHNPWLPSPSLHS*:ENST00000268876-ENST00000376104,ENST00000433649-ENST00000376104,ENST00000378449-ENST00000376104,ENST00000394570-ENST00000376104, 	Intron:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	Intron:ENST00000376104, 	CDS:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	CDS:ENST00000376104, 	NO_DOMAIN:ENST00000378449,ENST00000433649, Repeat=TPR 1,Repeat=TPR 2,Repeat=TPR 3,Repeat=ARM 1,Repeat=ARM 2,:ENST00000268876,ENST00000394570, 	NO_DOMAIN:ENST00000378449,ENST00000433649, Repeat=ARM 3,:ENST00000268876,ENST00000394570, 	NO_DOMAIN:ENST00000376104, 	Domain=PDZ 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=PDZ 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=PDZ 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=SH3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00192,Domain=Guanylate kinase-like;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00100,:ENST00000376104, 
0.0003	4800	SRR064438	defuse	12	1194	8	19	22446787	22459597	24184075	24184165	+	-	AC037459.4	AC092279.1	22457163	24184164	ENSG00000248235|	ENSG00000251948|	breast_cancer	SRR064287,SRR064438,	breast_cancer,	NO_KINASE	ENST00000430850,	UnSpec,	FrameShift 	1:ENST00000430850, 	2060:ENST00000430850, 	-1:UnSpec, 	-1:UnSpec, 	MDSEGGSLLLDEDSEVFKMLQENREGRAAPRQSSSFRLLQEALEAEERGGTPAFLPSSLSPQSSLPASRALATPPKLHTCEKCSTSIANQAVRIQEGRYRHPGCYTCADCGLNLKMRGHFWVGDELYCEKHARQRYSAPATLSSRA*:ENST00000430850-UnSpec, 	Intron:ENST00000430850, 	-1:UnSpec, 	CDS:ENST00000430850, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000430850, 	DOMAIN_UNK:ENST00000430850, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0004	4801	SRR064438	defuse	11	13	20	20	45837859	45985567	34042985	34099804	-	+	ZMYND8	CEP250	45852970	34078463	ENSG00000101040|	ENSG00000126001|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	5p_KINASE	ENST00000311275,ENST00000471951,ENST00000396281,ENST00000262975,	ENST00000356095,ENST00000397527,	FrameShift 	1:ENST00000311275,ENST00000471951,ENST00000396281,ENST00000262975, 	1020:ENST00000262975, 1086:ENST00000471951, 1065:ENST00000311275,ENST00000396281, 	-1:ENST00000356095,ENST00000397527, 	-1:ENST00000356095,ENST00000397527, 	MHPQSLAEEEIKTEQEVVEGMDISTRSKDPGSAERTAQKRKFPSPPHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKEQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYLAACQKRDNWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVENIRRKFGVFNYSPFRTPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVKLNFDMTASPKILMSKPVLSGGTGRRISLSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLGHRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSSKFQTSSQKWHMQKMQRQQQQQQQQNQQQQPQSSQGTRYQTRQAVKAVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSGEGALLAPAGAGKGSGELRKGKNGAGNEAKGAADRNGGHPGPEGRRTDPGRECPMPDAAGNREGESIPPGDTAADAEGASRCQPTTGTTEAGHESPEIKGAGDHWDTTDPAPGGSTGAEGGSPAAQR*:ENST00000471951-ENST00000356095,ENST00000471951-ENST00000397527, MDISTRSKDPGSAERTAQKRKFPSPPHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKEQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYLAACQKRDNWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVENIRRKFGVFNYSPFRTPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVKLNFDMTASPKILMSKPVLSGGTGRRISLSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLGHRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSGEGALLAPAGAGKGSGELRKGKNGAGNEAKGAADRNGGHPGPEGRRTDPGRECPMPDAAGNREGESIPPGDTAADAEGASRCQPTTGTTEAGHESPEIKGAGDHWDTTDPAPGGSTGAEGGSPAAQR*:ENST00000262975-ENST00000397527,ENST00000262975-ENST00000356095, MDISTRSKDPGSAERTAQKRKFPSPPHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKEQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYLAACQKRDNWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVENIRRKFGVFNYSPFRTPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVKLNFDMTASPKILMSKPVLSGGTGRRISLSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSSKFQTSSQKWHMQKMQRQQQQQQQQNQQQQPQSSQGTRYQTRQAVKAVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSGEGALLAPAGAGKGSGELRKGKNGAGNEAKGAADRNGGHPGPEGRRTDPGRECPMPDAAGNREGESIPPGDTAADAEGASRCQPTTGTTEAGHESPEIKGAGDHWDTTDPAPGGSTGAEGGSPAAQR*:ENST00000396281-ENST00000397527,ENST00000396281-ENST00000356095,ENST00000311275-ENST00000356095,ENST00000311275-ENST00000397527, 	19:ENST00000311275,ENST00000471951,ENST00000396281, 20:ENST00000262975, 	22:ENST00000356095, 21:ENST00000397527, 	CDS:ENST00000311275,ENST00000471951,ENST00000396281,ENST00000262975, 	CDS:ENST00000356095,ENST00000397527, 	Domain=Bromo;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00035,Domain=PWWP;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00162,:ENST00000311275,ENST00000471951,ENST00000396281,ENST00000262975, 	Region=Interacts with PRKCB1,:ENST00000311275,ENST00000471951,ENST00000396281,ENST00000262975, 	NO_DOMAIN:ENST00000356095,ENST00000397527, 	NO_DOMAIN:ENST00000356095,ENST00000397527, 
0.0002	4802	SRR064438	defuse	11	14	1	1	566454	567996	91726323	91870426	+	-	RP5-857K21.6	HFM1	566981	91852951	ENSG00000237973|	ENSG00000162669|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000370421,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000370421, 	-1:ENST00000370421, 	LSRRCQKSYHRDNWLVAAKRS*:UnSpec-ENST00000370421, 	-1:UnSpec, 	Intron:ENST00000370421, 	Intergenic:UnSpec, 	CDS:ENST00000370421, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:ENST00000370421, 
0.0001	4803	SRR064438	defuse	7	1	2	15	217536828	217560248	20300986	20301282	-	-	IGFBP5	AC087386.1	217537048	20304926	ENSG00000115461|	ENSG00000239471|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000233813,	UnSpec,	UnSpec 	0:ENST00000233813, 	0:ENST00000233813, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000233813-UnSpec, 	Intron:ENST00000233813, 	Intron:UnSpec, 	3UTR:ENST00000233813, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000233813, 	DOMAIN_UNK:ENST00000233813, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4804	SRR064438	defuse	6	301	2	2	133038647	133038738	223725652	223809357	-	+	AC097532.1	ACSL3	133038720	223731671	ENSG00000252318|	ENSG00000123983|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0003	4805	SRR064438	defuse	6	880	17	5	33474836	33516364	177482605	177483195	+	+	UNC45B	RP11-889L3.1	33478232	177482611	ENSG00000141161|	ENSG00000218227|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000268876,	UnSpec,	FrameShift 	1:ENST00000268876, 	457:ENST00000268876, 	-1:UnSpec, 	-1:UnSpec, 	MAEVEAVQLKEEGNRHFQLQDYKAATNSYSQALKLTKDKALLATLYRNRAACGLKTESYVQAASDASRAIDINSSDIKALYRRCQALEHLGKLDQAFKDVQRCATLEPRNQNFQEMLRRLNTSIQEKVSWASSHNPWLPSPSLHS*:ENST00000268876-UnSpec, 	Intron:ENST00000268876, 	-1:UnSpec, 	CDS:ENST00000268876, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000268876, 	DOMAIN_UNK:ENST00000268876, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4806	SRR064438	defuse	5	6	21	11	35445892	35732332	83166055	85338966	+	-	AP000318.2	DLG2	35677446	85195011	ENSG00000214955|	ENSG00000150672|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000376104,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000376104, 	-1:ENST00000376104, 	QFASFYIVYTLIKYCSYYYSFFFFFGSLQPLHPGFK*:UnSpec-ENST00000376104, 	-1:UnSpec, 	Intron:ENST00000376104, 	Intergenic:UnSpec, 	CDS:ENST00000376104, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000376104, 	DOMAIN_UNK:ENST00000376104, 
0.0001	4807	SRR064438	defuse	14	1642	3	19	126061478	126076285	24184075	24184165	-	-	KLF15	AC092279.1	126061990	24184163	ENSG00000163884|	ENSG00000251948|	breast_cancer	SRR064286,SRR064438,	breast_cancer,	NO_KINASE	ENST00000296233,	UnSpec,	UnSpec 	0:ENST00000296233, 	0:ENST00000296233, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000296233-UnSpec, 	Intron:ENST00000296233, 	Intron:UnSpec, 	3UTR:ENST00000296233, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000296233, 	DOMAIN_UNK:ENST00000296233, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4808	SRR064438	defuse	5	21	12	1	34372314	34372611	91726323	91870426	-	-	AC140847.1	HFM1	34372743	91852784	ENSG00000243092|	ENSG00000162669|	breast_cancer	SRR064286,SRR064437,SRR064438,	breast_cancer,normal_tissue,	NO_KINASE	UnSpec,	ENST00000370421,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000370421, 	-1:ENST00000370421, 	GGSIS*:UnSpec-ENST00000370421, 	-1:UnSpec, 	Intron:ENST00000370421, 	Intergenic:UnSpec, 	CDS:ENST00000370421, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:ENST00000370421, 
0.0002	4809	SRR064438	defuse	9	23	5	1	71146740	71146942	108113461	108113552	+	-	AC116340.1	AC114491.2	71146742	108113394	ENSG00000239935|	ENSG00000252194|	breast_cancer	SRR064287,SRR064438,	breast_cancer,	NO_KINASE																
0.0002	4810	SRR064438	defuse	9	54	1	8	536816	659930	70584568	70747299	-	-	RP5-857K21.4	SLCO5A1	570103	70602525	ENSG00000230021|	ENSG00000137571|	breast_cancer	SRR064287,SRR064438,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000260126,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000260126, 	-1:ENST00000260126, 	GSNYDSLKVAKCLVI*:UnSpec-ENST00000260126, 	-1:UnSpec, 	Intron:ENST00000260126, 	Intergenic:UnSpec, 	CDS:ENST00000260126, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000260126, 	DOMAIN_UNK:ENST00000260126, 
0.0003	4811	SRR064438	defuse	5	277	7	19	44836279	44864163	24184075	24184165	+	-	PPIA	AC092279.1	44841083	24184157	ENSG00000196262|	ENSG00000251948|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000479021,	UnSpec,	FrameShift 	1:ENST00000479021, 	1586:ENST00000479021, 	-1:UnSpec, 	-1:UnSpec, 	MVNPTVFFDIAVDGEPLGRVSFEVGRAAACGNGAQKVGRGRGGW*:ENST00000479021-UnSpec, 	Intron:ENST00000479021, 	-1:UnSpec, 	CDS:ENST00000479021, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000479021, 	DOMAIN_UNK:ENST00000479021, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0003	4812	SRR064438	defuse	12	23811	17	8	33474836	33516364	136754586	136754738	+	-	UNC45B	U1.10	33478131	136786084	ENSG00000141161|	ENSG00000199652|	breast_cancer	SRR064287,SRR064438,SRR064440,	breast_cancer,	NO_KINASE	ENST00000268876,	UnSpec,	FrameShift 	1:ENST00000268876, 	423:ENST00000268876, 	-1:UnSpec, 	-1:UnSpec, 	MAEVEAVQLKEEGNRHFQLQDYKAATNSYSQALKLTKDKALLATLYRNRAACGLKTESYVQAASDASRAIDINSSDIKALYRRCQALEHLGKLDQAFKDVQRCATLEPRNQNFQEMLRRLNTSIQEKVSWASSHNPWLPSPSLHS*:ENST00000268876-UnSpec, 	Intron:ENST00000268876, 	-1:UnSpec, 	CDS:ENST00000268876, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000268876, 	DOMAIN_UNK:ENST00000268876, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4813	SRR064438	defuse	6	10	1	14	536816	659930	90178855	90179167	-	+	RP5-857K21.4	7SK.26	568372	90178860	ENSG00000230021|	ENSG00000200312|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0002	4814	SRR064438	defuse	38	25	1	2	536816	659930	132905164	133015542	-	-	RP5-857K21.4	ANKRD30BL	568509	133012912	ENSG00000230021|	ENSG00000163046|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4815	SRR064438	defuse	9	980	19	5	24184075	24184165	139624624	139682706	-	-	AC092279.1	PFDN1	24184164	139666182	ENSG00000251948|	ENSG00000113068|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000261813,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000261813, 	-1:ENST00000261813, 	AKKIEDSRGNIFRAMNFKKLSLSFPVPFHLCVNPFLFYIFFHLENGMTC*:UnSpec-ENST00000261813, 	-1:UnSpec, 	Intron:ENST00000261813, 	Intergenic:UnSpec, 	CDS:ENST00000261813, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000261813, 	DOMAIN_UNK:ENST00000261813, 
0.5700	4816	SRR064438	defuse	8	19	7	11	5566782	5603415	114392437	114430617	-	-	ACTB	FAM55A	5567271	114411593	ENSG00000075624|	ENSG00000095110|	breast_cancer	SRR064437,SRR064438,	breast_cancer,normal_tissue,	NO_KINASE	ENST00000331789,	ENST00000424269,	InFrame 	1:ENST00000331789, 	375:ENST00000331789, 	-1:ENST00000424269, 	-1:ENST00000424269, 	MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF:ENST00000331789-ENST00000424269, 	Intron:ENST00000331789, 	Intron:ENST00000424269, 	3UTR:ENST00000331789, 	CDS:ENST00000424269, 	NO_DOMAIN:ENST00000331789, 	NO_DOMAIN:ENST00000331789, 	DOMAIN_UNK:ENST00000424269, 	DOMAIN_UNK:ENST00000424269, 
0.0002	4817	SRR064438	defuse	5	17	2	2	47558199	47571656	140582465	140583446	+	-	BCYRN1	AC078851.1	47562594	140650107	ENSG00000236824|	ENSG00000223554|	breast_cancer	SRR064286,SRR064438,	breast_cancer,	NO_KINASE																
0.0001	4818	SRR064438	defuse	6	746	17	8	33474836	33516364	70584568	70747299	+	-	UNC45B	SLCO5A1	33478232	70602493	ENSG00000141161|	ENSG00000137571|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570,	ENST00000260126,	FrameShift 	1:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	457:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	-1:ENST00000260126, 	-1:ENST00000260126, 	MAEVEAVQLKEEGNRHFQLQDYKAATNSYSQALKLTKDKALLATLYRNRAACGLKTESYVQAASDASRAIDINSSDIKALYRRCQALEHLGKLDQAFKDVQRCATLEPRNQNFQEMLRRLNTSIQEKVSWASSHNPWLPSPSLHS*:ENST00000378449-ENST00000260126,ENST00000268876-ENST00000260126,ENST00000433649-ENST00000260126,ENST00000394570-ENST00000260126, 	Intron:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	Intron:ENST00000260126, 	CDS:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	CDS:ENST00000260126, 	NO_DOMAIN:ENST00000378449,ENST00000433649, Repeat=TPR 1,Repeat=TPR 2,Repeat=TPR 3,Repeat=ARM 1,Repeat=ARM 2,:ENST00000268876,ENST00000394570, 	NO_DOMAIN:ENST00000378449,ENST00000433649, Repeat=ARM 3,:ENST00000268876,ENST00000394570, 	NO_DOMAIN:ENST00000260126, 	Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=Kazal-like;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00798,:ENST00000260126, 
0.0002	4819	SRR064438	defuse	10	21	9	2	79186649	79186950	159313476	159539391	+	+	AL161626.1	PKP4	79186659	159440688	ENSG00000241781|	ENSG00000144283|	breast_cancer	SRR064287,SRR064438,	breast_cancer,	NO_KINASE																
0.0004	4820	SRR064438	defuse	150	10062	17	11	33474836	33516364	83166055	85338966	+	-	UNC45B	DLG2	33478117	85195042	ENSG00000141161|	ENSG00000150672|	breast_cancer	SRR064286,SRR064287,SRR064438,SRR064440,	breast_cancer,	NO_KINASE	ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570,	ENST00000376104,	FrameShift 	1:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	418:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	-1:ENST00000376104, 	-1:ENST00000376104, 	MAEVEAVQLKEEGNRHFQLQDYKAATNSYSQALKLTKDKALLATLYRNRAACGLKTESYVQAASDASRAIDINSSDIKALYRRCQALEHLGKLDQAFKDVQRCATLEPRNQNFQEMLRRLNTSIQEKVSWASSHNPWLPSPSLHS*:ENST00000268876-ENST00000376104,ENST00000433649-ENST00000376104,ENST00000378449-ENST00000376104,ENST00000394570-ENST00000376104, 	Intron:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	Intron:ENST00000376104, 	CDS:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	CDS:ENST00000376104, 	NO_DOMAIN:ENST00000378449,ENST00000433649,ENST00000268876, Repeat=TPR 1,Repeat=TPR 2,Repeat=TPR 3,Repeat=ARM 1,Repeat=ARM 2,:ENST00000394570, 	NO_DOMAIN:ENST00000378449,ENST00000433649, Repeat=ARM 3,:ENST00000394570, Repeat=TPR 1,Repeat=TPR 2,Repeat=TPR 3,Repeat=ARM 1,Repeat=ARM 2,Repeat=ARM 3,:ENST00000268876, 	NO_DOMAIN:ENST00000376104, 	Domain=PDZ 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=PDZ 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=PDZ 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=SH3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00192,Domain=Guanylate kinase-like;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00100,:ENST00000376104, 
0.9941	4821	SRR064438	defuse	6	7	17	17	37560538	37607521	53046088	53241646	-	+	MED1	STXBP4	37607291	53218671	ENSG00000125686|	ENSG00000166263|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000300651,ENST00000394287,	ENST00000376352,	InFrame 	1:ENST00000300651,ENST00000394287, 	8:ENST00000300651,ENST00000394287, 	497:ENST00000376352, 	553:ENST00000376352, 	MKAQGETEGLPYGWEEAYTADGIKYFINHVTQTTSWIHPVMSVLNLSRSEENEEDCSRELPNQKS:ENST00000394287-ENST00000376352,ENST00000300651-ENST00000376352, 	1:ENST00000300651,ENST00000394287, 	17:ENST00000376352, 	CDS:ENST00000300651,ENST00000394287, 	CDS:ENST00000376352, 	Region=Interaction with the Mediator complex and THRA,:ENST00000300651,ENST00000394287, 	Region=Interaction with ESR1,Region=Interaction with the Mediator complex,Region=Interaction with the Mediator complex,Region=Interaction with THRA,Region=Interaction with VDR,Region=Interaction with PPARGC1A and THRA,Region=Interaction with ESR1,Region=Interaction with GATA1;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24245781;Dbxref=PMID:24245781,Region=Interaction with TP53,:ENST00000300651,ENST00000394287, 	Domain=WW;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00224,:ENST00000376352, 	Domain=PDZ;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,:ENST00000376352, 
0.0002	4822	SRR064438	defuse	27	980	19	2	24184075	24184165	33050510	33151760	-	+	AC092279.1	AL121656.4	24184164	33141648	ENSG00000251948|	ENSG00000230876|	breast_cancer	SRR064438,SRR064440,	breast_cancer,	NO_KINASE																
0.0002	4823	SRR064438	defuse	5	2813	19	2	24184075	24184165	132905164	133015542	-	-	AC092279.1	ANKRD30BL	24184150	133012540	ENSG00000251948|	ENSG00000163046|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0004	4824	SRR064438	defuse	5	14	20	19	56884752	56942563	17212466	17324103	+	+	RAB22A	MYO9B	56886178	17256207	ENSG00000124209|	ENSG00000099331|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000244040,	ENST00000397274,ENST00000319396,	FrameShift 	1:ENST00000244040, 	38:ENST00000244040, 	-1:ENST00000397274,ENST00000319396, 	-1:ENST00000397274,ENST00000319396, 	MALRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGLLEMPRQPTTTTPAGLGNSSKSAT*:ENST00000244040-ENST00000319396,ENST00000244040-ENST00000397274, 	2:ENST00000244040, 	2:ENST00000397274,ENST00000319396, 	CDS:ENST00000244040, 	CDS:ENST00000397274,ENST00000319396, 	NO_DOMAIN:ENST00000244040, 	NO_DOMAIN:ENST00000244040, 	NO_DOMAIN:ENST00000397274,ENST00000319396, 	Domain=Ras-associating;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00166,Domain=Myosin motor,Domain=IQ 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=IQ 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=IQ 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=IQ 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=Rho-GAP;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00172,Region=Actin-binding;Ontology_term=ECO:0000305;evidence=ECO:0000305,Region=Neck or regulatory domain;Ontology_term=ECO:0000305;evidence=ECO:0000305,Region=Tail;Ontology_term=ECO:0000305;evidence=ECO:0000305,Region=Interaction with RHOA;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:26529257;Dbxref=PMID:26529257,:ENST00000397274, NO_DOMAIN:ENST00000319396, 
0.0002	4825	SRR064438	defuse	6	4	1	1	247373993	247405125	247353153	247372795	-	-	RP11-488L18.8	RP11-488L18.4	247373994	247365398	ENSG00000232347|	ENSG00000227671|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE																
0.5700	4826	SRR064438	defuse	7	3	3	13	58549844	58613337	72012098	72441330	-	-	FAM107A	DACH1	58551170	72249657	ENSG00000168309|	ENSG00000165659|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000360997,	ENST00000305425,	InFrame 	1:ENST00000360997, 	144:ENST00000360997, 	-1:ENST00000305425, 	-1:ENST00000305425, 	MYSEIQRERADIGGLMARPEYREWNPELIKPKKLLNPVKASRSHQELHRELLMNHRRGLGVDSKPELQRVLEHRRRNQLIKKKKEELEAKRLQCPFEQELLRRQQRLNQLEKPPEKEEDHAPEFIKVRENLRRIATLTSEEREL:ENST00000360997-ENST00000305425, 	Intron:ENST00000360997, 	Intron:ENST00000305425, 	3UTR:ENST00000360997, 	CDS:ENST00000305425, 	NO_DOMAIN:ENST00000360997, 	NO_DOMAIN:ENST00000360997, 	DOMAIN_UNK:ENST00000305425, 	DOMAIN_UNK:ENST00000305425, 
0.0004	4827	SRR064438	defuse	5	10	5	5	170814120	170838141	118309491	118309817	+	+	NPM1	CTB-161M19.3	170819802	118309571	ENSG00000181163|	ENSG00000197744|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000296930,	UnSpec,	FrameShift 	1:ENST00000296930, 	450:ENST00000296930, 	-1:UnSpec, 	-1:UnSpec, 	MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVGMLFLYIILLSLSSLVQLLGSQFGLKAWV*:ENST00000296930-UnSpec, 	5:ENST00000296930, 	-1:UnSpec, 	CDS:ENST00000296930, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000296930, 	DOMAIN_UNK:ENST00000296930, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.1392	4828	SRR064438	defuse	5	10	10	12	33466420	33625190	12202797	12363947	-	+	NRP1	BCL2L14	33623602	12264438	ENSG00000099250|	ENSG00000121380|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000265371,	ENST00000298566,	FrameShift 	-1:ENST00000265371, 	-1:ENST00000265371, 	-1:ENST00000298566, 	-1:ENST00000298566, 	MTRALHHPTQTMRICNRGGKKNQNFQGPAFFFLKVL*:ENST00000265371-ENST00000298566, 	2:ENST00000265371, 	Intron:ENST00000298566, 	5UTR:ENST00000265371, 	CDS:ENST00000298566, 	DOMAIN_UNK:ENST00000265371, 	DOMAIN_UNK:ENST00000265371, 	NO_DOMAIN:ENST00000298566, 	NO_DOMAIN:ENST00000298566, 
0.0002	4829	SRR064438	defuse	6	3	12	12	123773656	123834988	123849500	123850660	-	+	SBNO1	RP13-942N8.1	123834988	123849248	ENSG00000139697|	ENSG00000256092|	breast_cancer	SRR064287,SRR064438,SRR064439,SRR064441,	breast_cancer,	NO_KINASE	ENST00000267176,	UnSpec,	UnSpec 	1:ENST00000267176, 	0:ENST00000267176, 	-1:UnSpec, 	-1:UnSpec, 	:ENST00000267176-UnSpec, 	1:ENST00000267176, 	-1:UnSpec, 	CDS:ENST00000267176, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000267176, 	DOMAIN_UNK:ENST00000267176, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0001	4830	SRR064438	defuse	7	6	2	4	217536828	217560248	153021906	153025872	-	+	IGFBP5	RP11-18H21.1	217537060	152961553	ENSG00000115461|	ENSG00000245954|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000233813,	UnSpec,	UnSpec 	0:ENST00000233813, 	0:ENST00000233813, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000233813-UnSpec, 	Intron:ENST00000233813, 	Intron:UnSpec, 	3UTR:ENST00000233813, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000233813, 	DOMAIN_UNK:ENST00000233813, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4831	SRR064438	defuse	5	25	MT	MT	577	647	8527	9207	+	+	J01415.2	MT-ATP6	414	8612	ENSG00000210049|	ENSG00000198899|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0002	4832	SRR064438	defuse	69	31	12	9	34372314	34372611	79186649	79186950	-	+	AC140847.1	AL161626.1	34372509	79186656	ENSG00000243092|	ENSG00000241781|	breast_cancer	SRR064287,SRR064438,SRR064440,	breast_cancer,	NO_KINASE																
0.0002	4833	SRR064438	defuse	5	5	1	X	161166894	161184185	135730352	135742549	+	+	NDUFS2	CD40LG	161184072	135742296	ENSG00000158864|	ENSG00000102245|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0001	4834	SRR064438	defuse	5	1	8	8	144806103	144815971	144816310	144828507	-	+	FAM83H	RP11-429J17.6	144815866	144819823	ENSG00000180921|	ENSG00000203499|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000388913,	UnSpec,	UnSpec 	0:ENST00000388913, 	0:ENST00000388913, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000388913-UnSpec, 	Intron:ENST00000388913, 	Intron:UnSpec, 	5UTR:ENST00000388913, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000388913, 	DOMAIN_UNK:ENST00000388913, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4835	SRR064438	defuse	9	1	17	4	48939584	48945339	190988796	190990406	-	+	TOB1	DUX4L8	48940612	190988789	ENSG00000141232|	ENSG00000250537|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000268957,	UnSpec,	UnSpec 	1:ENST00000268957, 	255:ENST00000268957, 	-1:UnSpec, 	-1:UnSpec, 	MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERLLKKKYEGHWYPEKPYKGSGFRCIHIGEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNNENGCELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTFTTATFAATKFGSTKMKNSGRSNKVARTSPINLGLNVNDLLKQKAISSSMHSLYGLGLGSQQQPQQQQQPAQPPPPPPP:ENST00000268957-UnSpec, 	3:ENST00000268957, 	-1:UnSpec, 	CDS:ENST00000268957, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000268957, 	DOMAIN_UNK:ENST00000268957, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4836	SRR064438	defuse	9	9	19	1	21990085	22034830	247353153	247372795	-	-	ZNF43	RP11-488L18.4	22001898	247363371	ENSG00000198521|	ENSG00000227671|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000354959,	UnSpec,	UnSpec 	1:ENST00000354959, 	43:ENST00000354959, 	-1:UnSpec, 	-1:UnSpec, 	MGPLTFMDVAIEFCLEEWQCLDIAQQNLYRNVMLENYRNLVFL:ENST00000354959-UnSpec, 	2:ENST00000354959, 	-1:UnSpec, 	CDS:ENST00000354959, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000354959, 	DOMAIN_UNK:ENST00000354959, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0001	4837	SRR064438	defuse	7	13	19	17	9938568	9940797	30469473	30552746	+	+	UBL5	RHOT1	9938660	30555138	ENSG00000198258|	ENSG00000126858|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000358666,	UnSpec,	UnSpec 	0:ENST00000358666, 	0:ENST00000358666, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000358666-UnSpec, 	Intron:ENST00000358666, 	Intron:UnSpec, 	5UTR:ENST00000358666, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000358666, 	DOMAIN_UNK:ENST00000358666, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4838	SRR064438	defuse	5	11	2	1	232318242	232348352	536816	659930	-	-	NCL	RP5-857K21.4	232326383	568362	ENSG00000115053|	ENSG00000230021|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000322723,	UnSpec,	UnSpec 	1:ENST00000322723, 	160:ENST00000322723, 	-1:UnSpec, 	-1:UnSpec, 	MVKLAKAGKNQGDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGKKAAATSAKKVVVSPTKKVAVATPAKKAAVTPGKKAAATPAKKTVTPAKAVTTPGKKGATPGKALVATPGKKGAAIPAKGAKNGKNAKKEDSDEEEDDDSEEDEEDD:ENST00000322723-UnSpec, 	3:ENST00000322723, 	-1:UnSpec, 	CDS:ENST00000322723, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000322723, 	DOMAIN_UNK:ENST00000322723, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.5700	4839	SRR064438	defuse	5	5	17	15	1367480	1395995	66994670	67074338	-	+	MYO1C	SMAD6	1368126	67008102	ENSG00000197879|	ENSG00000137834|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000359786,	ENST00000288840,	InFrame 	1:ENST00000359786, 	1063:ENST00000359786, 	-1:ENST00000288840, 	-1:ENST00000288840, 	MALQVELVPTGEIIRVVHPHRPCKLALGSDGVRVTMESALTARDRVGVQDFVLLENFTSEAAFIENLRRRFRENLIYTYIGPVLVSVNPYRDLQIYSRQHMERYRGVSFYEVPPHLFAVADTVYRALRTERRDQAVMISGESGAGKTEATKRLLQFYAETCPAPERGGAVRDRLLQSNPVLEAFGNAKTLRNDNSSRFGKYMDVQFDFKGAPVGGHILSYLLEKSRVVHQNHGERNFHIFYQLLEGGEEETLRRLGLERNPQSYLYLVKGQCAKVSSINDKSDWKVVRKALTVIDFTEDEVEDLLSIVASVLHLGNIHFAANEESNAQVTTENQLKYLTRLLSVEGSTLREALTHRKIIAKGEELLSPLNLEQAAYARDALAKAVYSRTFTWLVGKINRSLASKDVESPSWRSTTVLGLLDIYGFEVFQHNSFEQFCINYCNEKLQQLFIELTLKSEQEEYEAEGIAWEPVQYFNNKIICDLVEEKFKGIISILDEECLRPGEATDLTFLEKLEDTVKHHPHFLTHKLADQRTRKSLGRGEFRLLHYAGEVTYSVTGFLDKNNDLLFRNLKETMCSSKNPIMSQCFDRSELSDKKRPETVATQFKMSLLQLVEILQSKEPAYVRCIKPNDAKQPGRFDEVLIRHQVKYLGLLENLRVRRAGFAYRRKYEAFLQRYKSLCPETWPTWAGRPQDGVAVLVRHLGYKPEEYKMGRTKIFIRFPKTLFATEDALEVRRQSLATKIQAAWRGFHWRQKFLRVKRSAICIQSWWRGTLGRRKAAKRKWAAQTIRRLIRGFVLRHAPRCPENAFFLDHVRTSFLLNLRRQLPQNVLDTSWPTPPPALREASELLRELCIKNMVWKYCRSISPEWKQQLQQKAVASEIFKGKKDNYPQSVPRLFISTRLGTDEISPRVLQALGSEPIQYAVPVVKYDRKGYKPRSRQLLLTPNAVVIVEDAKVKQRIDYANLTGISVSSLSDSLFVLHVQRADNKQKGDVVLQSDHVIETLTKTALSANRVNSININQGSITFAGGPGRDGTIDFTPGSELLITKAKNGHLAVVAPRLNSR:ENST00000359786-ENST00000288840, 	Intron:ENST00000359786, 	Intron:ENST00000288840, 	3UTR:ENST00000359786, 	CDS:ENST00000288840, 	Domain=Myosin motor,Domain=IQ 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=IQ 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=TH1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01093,:ENST00000359786, 	NO_DOMAIN:ENST00000359786, 	DOMAIN_UNK:ENST00000288840, 	DOMAIN_UNK:ENST00000288840, 
0.0002	4840	SRR064438	defuse	8	980	19	X	24184075	24184165	31132808	33357558	-	-	AC092279.1	DMD	24184164	32777977	ENSG00000251948|	ENSG00000198947|	breast_cancer	SRR064438,SRR064440,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000288447,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000288447, 	-1:ENST00000288447, 	APPPPPRKTCICLKHKIQ*:UnSpec-ENST00000288447, 	-1:UnSpec, 	Intron:ENST00000288447, 	Intergenic:UnSpec, 	CDS:ENST00000288447, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000288447, 	DOMAIN_UNK:ENST00000288447, 
0.0002	4841	SRR064438	defuse	19	80	17	17	38218446	38250120	46210802	46507594	+	-	THRA	SKAP1	38243104	46371707	ENSG00000126351|	ENSG00000141293|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	3p_KINASE	ENST00000264637,ENST00000394121,ENST00000450525,	ENST00000336915,	FrameShift 	1:ENST00000264637,ENST00000394121,ENST00000450525, 	870:ENST00000264637,ENST00000394121,ENST00000450525, 	-1:ENST00000336915, 	-1:ENST00000336915, 	MEQKPSKVECGSDPEENSARSPDGKRKRKNGQCSLKTSMSGYIPSYLDKDEQCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVIDKITRNQCQLCRFKKCIAVGMAMDLVLDDSKRVAKRKLIEQNRERRRKEEMIRSLQQRPEPTPEEWDLIHIATEAHRSTNAQGSHWKQRRKFLVRRKGAWGEQ*:ENST00000264637-ENST00000336915,ENST00000394121-ENST00000336915,ENST00000450525-ENST00000336915, 	7:ENST00000264637,ENST00000394121,ENST00000450525, 	Intron:ENST00000336915, 	CDS:ENST00000264637,ENST00000394121,ENST00000450525, 	CDS:ENST00000336915, 	Region=Modulating,Region=Ligand-binding,:ENST00000264637,ENST00000394121,ENST00000450525, 	NO_DOMAIN:ENST00000264637,ENST00000394121,ENST00000450525, 	NO_DOMAIN:ENST00000336915, 	Domain=PH;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00145,Domain=SH3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00192,Region=Interaction with FYB,:ENST00000336915, 
0.0001	4842	SRR064438	defuse	5	1	14	4	20926012	20929637	40812044	41218731	-	-	TMEM55B	APBB2	20929546	41218559	ENSG00000165782|	ENSG00000163697|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000250489,	UnSpec,	UnSpec 	0:ENST00000250489, 	0:ENST00000250489, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000250489-UnSpec, 	Intron:ENST00000250489, 	Intron:UnSpec, 	5UTR:ENST00000250489, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000250489, 	DOMAIN_UNK:ENST00000250489, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4843	SRR064438	defuse	78	947	22	17	21271714	21308037	33474836	33516364	+	+	CRKL	UNC45B	21265469	33478487	ENSG00000099942|	ENSG00000141161|	breast_cancer	SRR064438,SRR064440,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000268876,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000268876, 	-1:ENST00000268876, 	M*:UnSpec-ENST00000268876, 	-1:UnSpec, 	Intron:ENST00000268876, 	Intergenic:UnSpec, 	CDS:ENST00000268876, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000268876, 	DOMAIN_UNK:ENST00000268876, 
0.0002	4844	SRR064438	defuse	7	3	2	1	33050510	33151760	108113461	108113552	+	-	AL121656.4	AC114491.2	33141583	108113634	ENSG00000230876|	ENSG00000252194|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.9964	4845	SRR064438	defuse	16	34	17	17	57970447	58027925	47006678	47022479	+	-	RPS6KB1	SNF8	57970686	47021337	ENSG00000108443|	ENSG00000159210|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	5p_KINASE	ENST00000406116,ENST00000225577,ENST00000425292,ENST00000393021,	ENST00000502492,ENST00000290330,	InFrame 	1:ENST00000406116,ENST00000225577,ENST00000425292,ENST00000393021, 	47:ENST00000406116,ENST00000225577,ENST00000425292,ENST00000393021, 	18:ENST00000502492,ENST00000290330, 	257:ENST00000290330, 258:ENST00000502492, 	MRRRRRRDGFYPAPDFRDREAEDMAGVFDIDLDQPEDAGSEDELEEGAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTVVLQLAENGYVTVSEIKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLPALFTDLYSQEITAEEAREALP:ENST00000225577-ENST00000290330, MRRRRRRDGFYPAPDFRDREAEDMAGVFDIDLDQPEDAGSEDELEEGAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTVVLQLAEKNGYVTVSEIKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLPALFTDLYSQEITAEEAREALP:ENST00000406116-ENST00000502492,ENST00000425292-ENST00000502492,ENST00000393021-ENST00000502492,ENST00000225577-ENST00000502492, 	1:ENST00000406116,ENST00000225577,ENST00000425292,ENST00000393021, 	2:ENST00000502492,ENST00000290330, 	CDS:ENST00000406116,ENST00000225577,ENST00000425292,ENST00000393021, 	CDS:ENST00000502492,ENST00000290330, 	NO_DOMAIN:ENST00000406116,ENST00000225577,ENST00000425292,ENST00000393021, 	Domain=Protein kinase;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00159,Domain=AGC-kinase C-terminal,Region=Autoinhibitory domain,:ENST00000406116,ENST00000225577,ENST00000393021, NO_DOMAIN:ENST00000425292, 	NO_DOMAIN:ENST00000502492,ENST00000290330, 	NO_DOMAIN:ENST00000502492,ENST00000290330, 
0.0001	4846	SRR064438	defuse	7	762	17	8	33474836	33516364	70584568	70747299	+	-	UNC45B	SLCO5A1	33478232	70602341	ENSG00000141161|	ENSG00000137571|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570,	ENST00000260126,	FrameShift 	1:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	457:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	-1:ENST00000260126, 	-1:ENST00000260126, 	MAEVEAVQLKEEGNRHFQLQDYKAATNSYSQALKLTKDKALLATLYRNRAACGLKTESYVQAASDASRAIDINSSDIKALYRRCQALEHLGKLDQAFKDVQRCATLEPRNQNFQEMLRRLNTSIQEKVSWASSHNPWLPSPSLHS*:ENST00000378449-ENST00000260126,ENST00000268876-ENST00000260126,ENST00000433649-ENST00000260126,ENST00000394570-ENST00000260126, 	Intron:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	Intron:ENST00000260126, 	CDS:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	CDS:ENST00000260126, 	NO_DOMAIN:ENST00000378449,ENST00000433649, Repeat=TPR 1,Repeat=TPR 2,Repeat=TPR 3,Repeat=ARM 1,Repeat=ARM 2,:ENST00000268876,ENST00000394570, 	NO_DOMAIN:ENST00000378449,ENST00000433649, Repeat=ARM 3,:ENST00000268876,ENST00000394570, 	NO_DOMAIN:ENST00000260126, 	Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=Kazal-like;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00798,:ENST00000260126, 
0.5414	4847	SRR064438	defuse	8	48	17	17	35441923	35766902	37366789	37382040	-	-	ACACA	STAC2	35479453	37374426	ENSG00000132142|	ENSG00000141750|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000353139,ENST00000335166,	ENST00000333461,	InFrame 	1:ENST00000353139,ENST00000335166, 	1931:ENST00000335166, 2046:ENST00000353139, 	30:ENST00000333461, 	411:ENST00000333461, 	MSGLHLVKQGRDRKKIDSQRDFTVASPAEFVTRFGGNKVIEKVLIANNGIAAVKCMRSIRRWSYEMFRNERAIRFVVMVTPEDLKANAEYIKMADHYVPVPGGPNNNNYANVELILDIAKRIPVQAVWAGWGHASENPKLPELLLKNGIAFMGPPSQAMWALGDKIASSIVAQTAGIPTLPWSGSGLRVDWQENDFSKRILNVPQELYEKGYVKDVDDGLQAAEEVGYPVMIKASEGGGGKGIRKVNNADDFPNLFRQVQAEVPGSPIFVMRLAKQSRHLEVQILADQYGNAISLFGRDCSVQRRHQKIIEEAPATIATPAVFEHMEQCAVKLAKMVGYVSAGTVEYLYSQDGSFYFLELNPRLQVEHPCTEMVADVNLPAAQLQIAMGIPLYRIKDIRMMYGVSPWGDSPIDFEDSAHVPCPRGHVIAARITSENPDEGFKPSSGTVQELNFRSNKNVWGYFSVAAAGGLHEFADSQFGHCFSWGENREEAISNMVVALKELSIRGDFRTTVEYLIKLLETESFQMNRIDTGWLDRLIAEKVQAERPDTMLGVVCGALHVADVSLRNSVSNFLHSLERGQVLPAHTLLNTVDVELIYEGVKYVLKVTRQSPNSYVVIMNGSCVEVDVHRLSDGGLLLSYDGSSYTTYMKEEVDRYRITIGNKTCVFEKENDPSVMRSPSAGKLIQYIVEDGGHVFAGQCYAEIEVMKMVMTLTAVESGCIHYVKRPGAALDPGCVLAKMQLDNPSKVQQAELHTGSLPRIQSTALRGEKLHRVFHYVLDNLVNVMNGYCLPDPFFSSKVKDWVERLMKTLRDPSLPLLELQDIMTSVSGRIPPNVEKSIKKEMAQYASNITSVLCQFPSQQIANILDSHAATLNRKSEREVFFMNTQSIVQLVQRYRSGIRGHMKAVVMDLLRQYLRVETQFQNGHYDKCVFALREENKSDMNTVLNYIFSHAQVTKKNLLVTMLIDQLCGRDPTLTDELLNILTELTQLSKTTNAKVALRARQVLIASHLPSYELRHNQVESIFLSAIDMYGHQFCIENLQKLILSETSIFDVLPNFFYHSNQVVRMAALEVYVRRAYIAYELNSVQHRQLKDNTCVVEFQFMLPTSHPNRGNIPTLNRMSFSSNLNHYGMTHVASVSDVLLDNSFTPPCQRMGGMVSFRTFEDFVRIFDEVMGCFSDSPPQSPTFPEAGHTSLYDEDKVPRDEPIHILNVAIKTDCDIEDDRLAAMFREFTQQNKATLVDHGIRRLTFLVAQKDFRKQVNYEVDRRFHREFPKFFTFRARDKFEEDRIYRHLEPALAFQLELNRMRNFDLTAIPCANHKMHLYLGAAKVEVGTEVTDYRFFVRAIIRHSDLVTKEASFEYLQNEGERLLLEAMDELEVAFNNTNVRTDCNHIFLNFVPTVIMDPSKIEESVRSMVMRYGSRLWKLRVLQAELKINIRLTPTGKAIPIRLFLTNESGYYLDISLYKEVTDSRTAQIMFQAYGDKQGPLHGMLINTPYVTKDLLQSKRFQAQSLGTTYIYDIPEMFRQSLIKLWESMSTQAFLPSPPLPSDMLTYTELVLDDQGQLVHMNRLPGGNEIGMVAWKMTFKSPEYPEGRDIIVIGNDITYRIGSFGPQEDLLFLRASELARAEGIPRIYVSANSGARIGLAEEIRHMFHVAWVDPEDPYKGYRYLYLTPQDYKRVSALNSVHCEHVEDEGESRYKITDIIGKEEGIGPENLRGSGMIAGESSLAYNEIITISLVTCRAIGIGAYLVRLGQRTIQVENSHLILTGAGALNKVLGREVYTSNNQLGGIQIMHNNGVTHCTVCDDFEGVFTVLHWLSYMPKSVHSSVPLLNSKDPIDRIIEFVPTKTPYDPRWMLAGRPHPTQKGQWLSGFFDYGSFSEIMQPWAQTVVVGRARLGGIPVGVVAVETRTVELSIPADPANLDSEAKLQRFKRSLSLKTILRSKSLENFFLRSGSELKCPTEVLLTPPTPLPPPSPPPTASDRGLATPSPSPCPVPRPLAALKPVRLHSFQEHVFKRASPCELCHQLIVGNSKQGLRCKMCKVSVHLWCSEEISHQQCPGKTSTSFRRNFSSPLLVHEPPPVCATSKESPPTGDSGKVDPVYETLRYGTSLALMNRSSFSSTSESPTRSLSERDELTEDGEGSIRSSEEGPGDSASPVFTAPAESEGPGPEEKSPGQQLPKATLRKDVGPMYSYVALYKFLPQENNDLALQPGDRIMLVDDSNEDWWKGKIGDRVGFFPANFVQRVRPGENVWRCCQPFSGNKEQGYMSLKENQICVGVGRSKDADGFIRVSSGKKRGLVPVDALTEI:ENST00000335166-ENST00000333461, MWWSTLMSILRARSFWKWISTQTVRIIRAVRAHFGGIMDEPSPLAQPLELNQHSRFIIGSVSEDNSEDEISNLVKLDLLEEKEGSLSPASVGSDTLSDLGISSLQDGLALHIRSSMSGLHLVKQGRDRKKIDSQRDFTVASPAEFVTRFGGNKVIEKVLIANNGIAAVKCMRSIRRWSYEMFRNERAIRFVVMVTPEDLKANAEYIKMADHYVPVPGGPNNNNYANVELILDIAKRIPVQAVWAGWGHASENPKLPELLLKNGIAFMGPPSQAMWALGDKIASSIVAQTAGIPTLPWSGSGLRVDWQENDFSKRILNVPQELYEKGYVKDVDDGLQAAEEVGYPVMIKASEGGGGKGIRKVNNADDFPNLFRQVQAEVPGSPIFVMRLAKQSRHLEVQILADQYGNAISLFGRDCSVQRRHQKIIEEAPATIATPAVFEHMEQCAVKLAKMVGYVSAGTVEYLYSQDGSFYFLELNPRLQVEHPCTEMVADVNLPAAQLQIAMGIPLYRIKDIRMMYGVSPWGDSPIDFEDSAHVPCPRGHVIAARITSENPDEGFKPSSGTVQELNFRSNKNVWGYFSVAAAGGLHEFADSQFGHCFSWGENREEAISNMVVALKELSIRGDFRTTVEYLIKLLETESFQMNRIDTGWLDRLIAEKVQAERPDTMLGVVCGALHVADVSLRNSVSNFLHSLERGQVLPAHTLLNTVDVELIYEGVKYVLKVTRQSPNSYVVIMNGSCVEVDVHRLSDGGLLLSYDGSSYTTYMKEEVDRYRITIGNKTCVFEKENDPSVMRSPSAGKLIQYIVEDGGHVFAGQCYAEIEVMKMVMTLTAVESGCIHYVKRPGAALDPGCVLAKMQLDNPSKVQQAELHTGSLPRIQSTALRGEKLHRVFHYVLDNLVNVMNGYCLPDPFFSSKVKDWVERLMKTLRDPSLPLLELQDIMTSVSGRIPPNVEKSIKKEMAQYASNITSVLCQFPSQQIANILDSHAATLNRKSEREVFFMNTQSIVQLVQRYRSGIRGHMKAVVMDLLRQYLRVETQFQNGHYDKCVFALREENKSDMNTVLNYIFSHAQVTKKNLLVTMLIDQLCGRDPTLTDELLNILTELTQLSKTTNAKVALRARQVLIASHLPSYELRHNQVESIFLSAIDMYGHQFCIENLQKLILSETSIFDVLPNFFYHSNQVVRMAALEVYVRRAYIAYELNSVQHRQLKDNTCVVEFQFMLPTSHPNRGNIPTLNRMSFSSNLNHYGMTHVASVSDVLLDNSFTPPCQRMGGMVSFRTFEDFVRIFDEVMGCFSDSPPQSPTFPEAGHTSLYDEDKVPRDEPIHILNVAIKTDCDIEDDRLAAMFREFTQQNKATLVDHGIRRLTFLVAQKDFRKQVNYEVDRRFHREFPKFFTFRARDKFEEDRIYRHLEPALAFQLELNRMRNFDLTAIPCANHKMHLYLGAAKVEVGTEVTDYRFFVRAIIRHSDLVTKEASFEYLQNEGERLLLEAMDELEVAFNNTNVRTDCNHIFLNFVPTVIMDPSKIEESVRSMVMRYGSRLWKLRVLQAELKINIRLTPTGKAIPIRLFLTNESGYYLDISLYKEVTDSRTAQIMFQAYGDKQGPLHGMLINTPYVTKDLLQSKRFQAQSLGTTYIYDIPEMFRQSLIKLWESMSTQAFLPSPPLPSDMLTYTELVLDDQGQLVHMNRLPGGNEIGMVAWKMTFKSPEYPEGRDIIVIGNDITYRIGSFGPQEDLLFLRASELARAEGIPRIYVSANSGARIGLAEEIRHMFHVAWVDPEDPYKGYRYLYLTPQDYKRVSALNSVHCEHVEDEGESRYKITDIIGKEEGIGPENLRGSGMIAGESSLAYNEIITISLVTCRAIGIGAYLVRLGQRTIQVENSHLILTGAGALNKVLGREVYTSNNQLGGIQIMHNNGVTHCTVCDDFEGVFTVLHWLSYMPKSVHSSVPLLNSKDPIDRIIEFVPTKTPYDPRWMLAGRPHPTQKGQWLSGFFDYGSFSEIMQPWAQTVVVGRARLGGIPVGVVAVETRTVELSIPADPANLDSEAKLQRFKRSLSLKTILRSKSLENFFLRSGSELKCPTEVLLTPPTPLPPPSPPPTASDRGLATPSPSPCPVPRPLAALKPVRLHSFQEHVFKRASPCELCHQLIVGNSKQGLRCKMCKVSVHLWCSEEISHQQCPGKTSTSFRRNFSSPLLVHEPPPVCATSKESPPTGDSGKVDPVYETLRYGTSLALMNRSSFSSTSESPTRSLSERDELTEDGEGSIRSSEEGPGDSASPVFTAPAESEGPGPEEKSPGQQLPKATLRKDVGPMYSYVALYKFLPQENNDLALQPGDRIMLVDDSNEDWWKGKIGDRVGFFPANFVQRVRPGENVWRCCQPFSGNKEQGYMSLKENQICVGVGRSKDADGFIRVSSGKKRGLVPVDALTEI:ENST00000353139-ENST00000333461, 	49:ENST00000353139, 48:ENST00000335166, 	2:ENST00000333461, 	CDS:ENST00000353139,ENST00000335166, 	CDS:ENST00000333461, 	NO_DOMAIN:ENST00000353139,ENST00000335166, 	NO_DOMAIN:ENST00000353139,ENST00000335166, 	Domain=SH3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00192,:ENST00000333461, 	NO_DOMAIN:ENST00000333461, 
0.0002	4848	SRR064438	defuse	10	8	MT	MT	8366	8572	14149	14673	+	-	J01415.25	MT-ND6	8463	14449	ENSG00000228253|	ENSG00000198695|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0002	4849	SRR064438	defuse	23	8884	22	17	21271714	21308037	33474836	33516364	+	+	CRKL	UNC45B	21265412	33478113	ENSG00000099942|	ENSG00000141161|	breast_cancer	SRR064438,SRR064440,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000268876,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000268876, 	-1:ENST00000268876, 	FRTPHFPRPTAGRGFGAGLFPVHSPLLRESWLVSFPPLTNMLKFSGSPRLI*:UnSpec-ENST00000268876, 	-1:UnSpec, 	Intron:ENST00000268876, 	Intergenic:UnSpec, 	CDS:ENST00000268876, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000268876, 	DOMAIN_UNK:ENST00000268876, 
0.0013	4850	SRR064438	defuse	5	3	17	17	58755172	59470198	60019967	60142643	+	-	BCAS3	MED13	59457932	60129898	ENSG00000141376|	ENSG00000108510|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000407086,	ENST00000262436,ENST00000397786,	FrameShift 	1:ENST00000407086, 	916:ENST00000407086, 	-1:ENST00000262436,ENST00000397786, 	-1:ENST00000262436,ENST00000397786, 	MNEAMATDSPRRPSRCTGGVVVRPQAVTEQSYMESVVTFLQDVVPQAYSGTPLTEEKEKIVWVRFENADLNDTSRNLEFHEIHSTGNEPPLLIMIGYSDGMQVWSIPISGEAQELFSVRHGPIRAARILPAPQFGAQKCDNFAEKRPLLGVCKSIGSSGTSPPYCCVDLYSLRTGEMVKSIQFKTPIYDLHCNKRILVVVLQEKIAAFDSCTFTKKFFVTSCYPCPGPNMNPIALGSRWLAYAENKLIRCHQSRGGACGDNIQSYTATVISAAKTLKSGLTMVGKVVTQLTGTLPSGVTEDDVAIHSNSRRSPLVPGIITVIDTETVGEGQVLVSEDSDSDGIVAHFPAHEKPVCCMAFNTSGMLLVTTDTLGHDFHVFQILTHPWSSSQCAVHHLYTLHRGETEAKVQDICFSHDCRWVVVSTLRGTSHVFPINPYGGQPCVRTHMSPRVVNRMSRFQKSAGLEEIEQELTSKQGGRCSPVPGLSSSPSGSPLHGKLNSQDSYNNFTNNNPGNPRLSPLPSLMVVMPLAQIKQPMTLGTITKRTGPYLFGAGCFSIKAPWSYIMTKYIFYIKPPNKVKPPPQISPSKSMGGEFCVAAIFGTSRSWFANNAGLKREKDQSKQVVVESLYIISCYGTLVEHMMEPRPLSTAPKISDDTPLEMMTSPRASWTLVRTPQWNELQPPFNANHPLLLAADAVQYYQFLLAGLVPPGSPGPITRHGSYDSLASDHSGQEDEEWLSQVEIVTHTGPHRRLWMGPQFQFKTIHPSGQTTVISSSSSVLQSHGPSDTPQPLLDFDTDDLDLNSLRIQPVRSDPVSMPGSSRPVSDRRGVSTVIDAASGTFDRSVTLLEVCGSWPEGFGLRHMSSMEHTEEGLRERLADAMAESPSRDVVGSGTDTALDVAVKTFPPERHVAVKCFG*:ENST00000407086-ENST00000397786,ENST00000407086-ENST00000262436, 	25:ENST00000407086, 	3:ENST00000397786, 5:ENST00000262436, 	CDS:ENST00000407086, 	CDS:ENST00000262436,ENST00000397786, 	Repeat=WD 1,Repeat=WD 2,Repeat=WD 3,Repeat=WD 4,Repeat=WD 5,Repeat=WD 6,Repeat=WD 7,:ENST00000407086, 	NO_DOMAIN:ENST00000407086, 	NO_DOMAIN:ENST00000262436,ENST00000397786, 	NO_DOMAIN:ENST00000262436,ENST00000397786, 
0.0002	4851	SRR064438	defuse	5	20	7	7	100860949	100867471	5566782	5603415	+	-	ZNHIT1	ACTB	100863401	5567282	ENSG00000106400|	ENSG00000075624|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	ENST00000305105,	ENST00000331789,	FrameShift 	1:ENST00000305105, 	7:ENST00000305105, 	0:ENST00000331789, 	0:ENST00000331789, 	MVEKKTS:ENST00000305105-ENST00000331789, 	Intron:ENST00000305105, 	-1:ENST00000331789, 	CDS:ENST00000305105, 	3UTR:ENST00000331789, 	NO_DOMAIN:ENST00000305105, 	Region=Interaction with NR1D2,:ENST00000305105, 	DOMAIN_UNK:ENST00000331789, 	DOMAIN_UNK:ENST00000331789, 
0.0002	4852	SRR064438	defuse	9	4	11	3	61727190	61735132	126061478	126076285	-	-	FTH1	KLF15	61734974	126061993	ENSG00000167996|	ENSG00000163884|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0002	4853	SRR064438	defuse	16	56	5	18	14652050	14653438	45357922	45457515	-	-	CTD-2165H16.1	SMAD2	14652528	45379737	ENSG00000250182|	ENSG00000175387|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000262160,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000262160, 	-1:ENST00000262160, 	LHHKTSYTHELSPH*:UnSpec-ENST00000262160, 	-1:UnSpec, 	Intron:ENST00000262160, 	Intergenic:UnSpec, 	CDS:ENST00000262160, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000262160, 	DOMAIN_UNK:ENST00000262160, 
0.0002	4854	SRR064438	defuse	7	184	1	19	566454	567996	36066627	36066721	+	+	RP5-857K21.6	AD000090.1	567166	36066506	ENSG00000237973|	ENSG00000252666|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0002	4855	SRR064438	defuse	7	1	11	11	61727190	61735132	532242	537287	-	-	FTH1	HRAS	61734936	535285	ENSG00000167996|	ENSG00000174775|	breast_cancer	SRR064438,	breast_cancer,	NO_KINASE																
0.0002	4856	SRR064439	defuse	8	14	19	1	3972316	3985461	566454	567996	-	+	EEF2	RP5-857K21.6	3981945	566882	ENSG00000167658|	ENSG00000237973|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000309311,	UnSpec,	UnSpec 	1:ENST00000309311, 	299:ENST00000309311, 	-1:UnSpec, 	-1:UnSpec, 	MVNFTVDQIRAIMDKKANIRNMSVIAHVDHGKSTLTDSLVCKAGIIASARAGETRFTDTRKDEQERCITIKSTAISLFYELSENDLNFIKQSKDGAGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLMMNKMDRALLELQLEPEELYQTFQRIVENVNVIISTYGEGESGPMGNIMIDPVLGTVGFGSGLHGWAFTLKQFAEMYVAKFAAKGEGQLGPAERAKKVEDMMKKLWGDRYFDPANGKFSKSATSPEGKKLPRTFCQLILDPIFK:ENST00000309311-UnSpec, 	6:ENST00000309311, 	-1:UnSpec, 	CDS:ENST00000309311, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000309311, 	DOMAIN_UNK:ENST00000309311, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4857	SRR064439	defuse	5	24	8	1	146015150	146017972	536816	659930	-	-	RPL8	RP5-857K21.4	146017446	570015	ENSG00000161016|	ENSG00000230021|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000262584,	UnSpec,	UnSpec 	1:ENST00000262584, 	23:ENST00000262584, 	-1:UnSpec, 	-1:UnSpec, 	MGRVIRGQRKGAGSVFRAHVKHR:ENST00000262584-UnSpec, 	2:ENST00000262584, 	-1:UnSpec, 	CDS:ENST00000262584, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000262584, 	DOMAIN_UNK:ENST00000262584, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4858	SRR064439	defuse	6	7	MT	MT	14149	14673	5904	7445	-	+	MT-ND6	MT-CO1	14525	6674	ENSG00000198695|	ENSG00000198804|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4859	SRR064439	defuse	13	35	2	2	133038647	133038738	230045488	230045666	-	-	AC097532.1	AC006368.1	133038475	230045488	ENSG00000252318|	ENSG00000241530|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4860	SRR064439	defuse	5	452	MT	MT	12337	14148	7586	8269	+	+	MT-ND5	MT-CO2	13643	7623	ENSG00000198786|	ENSG00000198712|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0003	4861	SRR064439	defuse	10	44	X	2	31132808	33357558	133038647	133038738	-	-	DMD	AC097532.1	32777976	133038722	ENSG00000198947|	ENSG00000252318|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000288447,	UnSpec,	FrameShift 	1:ENST00000288447, 	16753:ENST00000288447, 	-1:UnSpec, 	-1:UnSpec, 	MEDEREDVQKKTFTKWVNAQFSKFGKQHIENLFSDLQDGRRLLDLLEGLTGQKLPKEKGSTRVHALNNVNKALRVLQNNNVDLVNIGSTDIVDGNHKLTLGLIWNIILHWQVKNVMKNIMAGLQQTNSEKILLSWVRQSTRNYPQVNVINFTTSWSDGLALNALIHSHRPDLFDWNSVVCQQSATQRLEHAFNIARYQLGIEKLLDPEGW*:ENST00000288447-UnSpec, 	Intron:ENST00000288447, 	-1:UnSpec, 	CDS:ENST00000288447, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000288447, 	DOMAIN_UNK:ENST00000288447, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0004	4862	SRR064439	defuse	5	2	12	17	3490515	3703139	80036215	80056106	+	-	PRMT8	FASN	3559915	80053303	ENSG00000111218|	ENSG00000169710|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000306749,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000306749, 	-1:ENST00000306749, 	LGLMPPSSESTPSRHTRWTLSCGCCWKSPMKPSWTEVGRAFATAAPRAPAAHVE*:UnSpec-ENST00000306749, 	-1:UnSpec, 	3:ENST00000306749, 	Intergenic:UnSpec, 	CDS:ENST00000306749, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000306749, 	DOMAIN_UNK:ENST00000306749, 
0.0002	4863	SRR064439	defuse	12	10	MT	MT	14149	14673	8366	8572	-	+	MT-ND6	J01415.25	14449	8463	ENSG00000198695|	ENSG00000228253|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0189	4864	SRR064439	defuse	22	8	4	1	76831809	76862204	247002400	247095280	-	-	NAAA	AHCTF1	76846964	247094880	ENSG00000138744|	ENSG00000153207|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000286733,	ENST00000478568,	FrameShift 	1:ENST00000286733, 	196:ENST00000286733, 	-1:ENST00000478568, 	-1:ENST00000478568, 	MRTADREARPGLPSLLLLLLAGAGLSAASPPAAPRFNVSLDSVPELRWLPVLRHYDLDLVRAAMAQVIGDRVPKWVHVLIGKVVLELERFLPQPFTGEIRGMCDFMNLSLADCLLVNLAYESSVFCTSIVAQDSRGHIYHGRNLDYPFGNVLRKLTVDVQFLKNGQIAFTGTTFIGYVGLWTGQSPHKFTVSGDEREWKYARLKSSSD*:ENST00000286733-ENST00000478568, 	5:ENST00000286733, 	-1:ENST00000478568, 	CDS:ENST00000286733, 	5UTR:ENST00000478568, 	DOMAIN_UNK:ENST00000286733, 	DOMAIN_UNK:ENST00000286733, 	DOMAIN_UNK:ENST00000478568, 	DOMAIN_UNK:ENST00000478568, 
0.0002	4865	SRR064439	defuse	14	77	MT	MT	577	647	8366	8572	+	+	J01415.2	J01415.25	332	8450	ENSG00000210049|	ENSG00000228253|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4866	SRR064439	defuse	5	7	1	5	536816	659930	14652050	14653438	-	-	RP5-857K21.4	CTD-2165H16.1	569029	14652684	ENSG00000230021|	ENSG00000250182|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0001	4867	SRR064439	defuse	6	6	8	8	144806103	144815971	144816310	144828507	-	+	FAM83H	RP11-429J17.6	144812766	144819816	ENSG00000180921|	ENSG00000203499|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000388913,	UnSpec,	UnSpec 	0:ENST00000388913, 	0:ENST00000388913, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000388913-UnSpec, 	Intron:ENST00000388913, 	Intron:UnSpec, 	5UTR:ENST00000388913, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000388913, 	DOMAIN_UNK:ENST00000388913, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0001	4868	SRR064439	defuse	5	2	1	1	153586731	153589462	565020	566063	-	+	S100A14	RP5-857K21.8	153587146	565041	ENSG00000189334|	ENSG00000225630|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000344616,	UnSpec,	UnSpec 	0:ENST00000344616, 	0:ENST00000344616, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000344616-UnSpec, 	Intron:ENST00000344616, 	Intron:UnSpec, 	3UTR:ENST00000344616, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000344616, 	DOMAIN_UNK:ENST00000344616, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4869	SRR064439	defuse	7	3	2	2	74229840	74329698	74213653	74220867	+	+	TET3	RP11-711M9.1	74230237	74213833	ENSG00000187605|	ENSG00000255989|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4870	SRR064439	defuse	18	102	19	2	24184075	24184165	33050510	33151760	-	+	AC092279.1	AL121656.4	24184151	33141250	ENSG00000251948|	ENSG00000230876|	breast_cancer	SRR064439,SRR064441,	breast_cancer,	NO_KINASE																
0.0004	4871	SRR064439	defuse	5	5	19	1	39936186	39967306	566454	567996	+	+	SUPT5H	RP5-857K21.6	39943998	567010	ENSG00000196235|	ENSG00000237973|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000359191,	UnSpec,	FrameShift 	1:ENST00000359191, 	2489:ENST00000359191, 	-1:UnSpec, 	-1:UnSpec, 	MSDSEDSNFSEEEDSERSSDGEEAEVCGWGAGGDIASGDRTPGRKAPVGGSRGSQRALASGNSQIVSRDRELGKSKSSKGTGSGGQKWVRSSEITGDVLKVYSVCI*:ENST00000359191-UnSpec, 	2:ENST00000359191, 	-1:UnSpec, 	CDS:ENST00000359191, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000359191, 	DOMAIN_UNK:ENST00000359191, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0004	4872	SRR064439	defuse	11	38	17	17	38218446	38250120	46371707	46385191	+	+	THRA	AC090627.1	38243104	46371707	ENSG00000126351|	ENSG00000235300|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000264637,	UnSpec,	FrameShift 	1:ENST00000264637, 	870:ENST00000264637, 	-1:UnSpec, 	-1:UnSpec, 	MEQKPSKVECGSDPEENSARSPDGKRKRKNGQCSLKTSMSGYIPSYLDKDEQCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVIDKITRNQCQLCRFKKCIAVGMAMDLVLDDSKRVAKRKLIEQNRERRRKEEMIRSLQQRPEPTPEEWDLIHIATEAHRSTNAQGSHWKQRRKFLVRRKGAWGEQ*:ENST00000264637-UnSpec, 	7:ENST00000264637, 	-1:UnSpec, 	CDS:ENST00000264637, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000264637, 	DOMAIN_UNK:ENST00000264637, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4873	SRR064439	defuse	8	6	14	1	90863327	90874617	565020	566063	+	+	CALM1	RP5-857K21.8	90863373	565701	ENSG00000198668|	ENSG00000225630|	breast_cancer	SRR064439,	breast_cancer,	5p_KINASE	ENST00000356978,	UnSpec,	UnSpec 	0:ENST00000356978, 	0:ENST00000356978, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000356978-UnSpec, 	Intron:ENST00000356978, 	Intron:UnSpec, 	5UTR:ENST00000356978, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000356978, 	DOMAIN_UNK:ENST00000356978, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4874	SRR064439	defuse	10	14	MT	MT	12337	14148	8366	8572	+	+	MT-ND5	J01415.25	13954	8478	ENSG00000198786|	ENSG00000228253|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4875	SRR064439	defuse	9	32	MT	MT	3307	4262	9207	9990	+	+	MT-ND1	MT-CO3	3621	9468	ENSG00000198888|	ENSG00000198938|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0189	4876	SRR064439	defuse	7	2	20	20	57226328	57254582	55926066	55954267	+	+	STX16	RAE1	57234688	55927053	ENSG00000124222|	ENSG00000101146|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000355957,	ENST00000371242,	FrameShift 	1:ENST00000355957, 	2542:ENST00000355957, 	-1:ENST00000371242, 	-1:ENST00000371242, 	MATRRLTDAFLLLRNNSIQNRQLLAEQVSSHITSSPLHSRSIAAVSLLAASPTHGPCALRLCLFVCLCLSLCLKREDKNNKTKNNKISWLESGGICSPG*:ENST00000355957-ENST00000371242, 	2:ENST00000355957, 	-1:ENST00000371242, 	CDS:ENST00000355957, 	5UTR:ENST00000371242, 	DOMAIN_UNK:ENST00000355957, 	DOMAIN_UNK:ENST00000355957, 	DOMAIN_UNK:ENST00000371242, 	DOMAIN_UNK:ENST00000371242, 
0.0002	4877	SRR064439	defuse	5	6	17	1	39775692	39943183	536816	659930	-	-	JUP	RP5-857K21.4	39925221	570024	ENSG00000173801|	ENSG00000230021|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000310706,	UnSpec,	UnSpec 	1:ENST00000310706, 	235:ENST00000310706, 	-1:UnSpec, 	-1:UnSpec, 	MEVMNLMEQPIKVTEWQQTYTYDSGIHSGANTCVPSVSSKGIMEEDEACGRQYTLKKTTTYTQGVPPSQGDLEYQMSTTARAKRVREAMCPGVSGEDSSLLLATQVEGQATNLQRLAEPSQLLKSAIVHLINYQDDAELATRALPELTKLLNDEDPVVVTKAAMIVNQLSKKEASRRALMGSPQLVAAVVRTMQNTSDLDTARCTTSILHNLSHHREGLLAIFKSGGIPALVRML:ENST00000310706-UnSpec, 	4:ENST00000310706, 	-1:UnSpec, 	CDS:ENST00000310706, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000310706, 	DOMAIN_UNK:ENST00000310706, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.5414	4878	SRR064439	defuse	42	30	17	17	35441923	35766902	37366789	37382040	-	-	ACACA	STAC2	35479453	37374426	ENSG00000132142|	ENSG00000141750|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000353139,ENST00000335166,	ENST00000333461,	InFrame 	1:ENST00000353139,ENST00000335166, 	1931:ENST00000335166, 2046:ENST00000353139, 	30:ENST00000333461, 	411:ENST00000333461, 	MSGLHLVKQGRDRKKIDSQRDFTVASPAEFVTRFGGNKVIEKVLIANNGIAAVKCMRSIRRWSYEMFRNERAIRFVVMVTPEDLKANAEYIKMADHYVPVPGGPNNNNYANVELILDIAKRIPVQAVWAGWGHASENPKLPELLLKNGIAFMGPPSQAMWALGDKIASSIVAQTAGIPTLPWSGSGLRVDWQENDFSKRILNVPQELYEKGYVKDVDDGLQAAEEVGYPVMIKASEGGGGKGIRKVNNADDFPNLFRQVQAEVPGSPIFVMRLAKQSRHLEVQILADQYGNAISLFGRDCSVQRRHQKIIEEAPATIATPAVFEHMEQCAVKLAKMVGYVSAGTVEYLYSQDGSFYFLELNPRLQVEHPCTEMVADVNLPAAQLQIAMGIPLYRIKDIRMMYGVSPWGDSPIDFEDSAHVPCPRGHVIAARITSENPDEGFKPSSGTVQELNFRSNKNVWGYFSVAAAGGLHEFADSQFGHCFSWGENREEAISNMVVALKELSIRGDFRTTVEYLIKLLETESFQMNRIDTGWLDRLIAEKVQAERPDTMLGVVCGALHVADVSLRNSVSNFLHSLERGQVLPAHTLLNTVDVELIYEGVKYVLKVTRQSPNSYVVIMNGSCVEVDVHRLSDGGLLLSYDGSSYTTYMKEEVDRYRITIGNKTCVFEKENDPSVMRSPSAGKLIQYIVEDGGHVFAGQCYAEIEVMKMVMTLTAVESGCIHYVKRPGAALDPGCVLAKMQLDNPSKVQQAELHTGSLPRIQSTALRGEKLHRVFHYVLDNLVNVMNGYCLPDPFFSSKVKDWVERLMKTLRDPSLPLLELQDIMTSVSGRIPPNVEKSIKKEMAQYASNITSVLCQFPSQQIANILDSHAATLNRKSEREVFFMNTQSIVQLVQRYRSGIRGHMKAVVMDLLRQYLRVETQFQNGHYDKCVFALREENKSDMNTVLNYIFSHAQVTKKNLLVTMLIDQLCGRDPTLTDELLNILTELTQLSKTTNAKVALRARQVLIASHLPSYELRHNQVESIFLSAIDMYGHQFCIENLQKLILSETSIFDVLPNFFYHSNQVVRMAALEVYVRRAYIAYELNSVQHRQLKDNTCVVEFQFMLPTSHPNRGNIPTLNRMSFSSNLNHYGMTHVASVSDVLLDNSFTPPCQRMGGMVSFRTFEDFVRIFDEVMGCFSDSPPQSPTFPEAGHTSLYDEDKVPRDEPIHILNVAIKTDCDIEDDRLAAMFREFTQQNKATLVDHGIRRLTFLVAQKDFRKQVNYEVDRRFHREFPKFFTFRARDKFEEDRIYRHLEPALAFQLELNRMRNFDLTAIPCANHKMHLYLGAAKVEVGTEVTDYRFFVRAIIRHSDLVTKEASFEYLQNEGERLLLEAMDELEVAFNNTNVRTDCNHIFLNFVPTVIMDPSKIEESVRSMVMRYGSRLWKLRVLQAELKINIRLTPTGKAIPIRLFLTNESGYYLDISLYKEVTDSRTAQIMFQAYGDKQGPLHGMLINTPYVTKDLLQSKRFQAQSLGTTYIYDIPEMFRQSLIKLWESMSTQAFLPSPPLPSDMLTYTELVLDDQGQLVHMNRLPGGNEIGMVAWKMTFKSPEYPEGRDIIVIGNDITYRIGSFGPQEDLLFLRASELARAEGIPRIYVSANSGARIGLAEEIRHMFHVAWVDPEDPYKGYRYLYLTPQDYKRVSALNSVHCEHVEDEGESRYKITDIIGKEEGIGPENLRGSGMIAGESSLAYNEIITISLVTCRAIGIGAYLVRLGQRTIQVENSHLILTGAGALNKVLGREVYTSNNQLGGIQIMHNNGVTHCTVCDDFEGVFTVLHWLSYMPKSVHSSVPLLNSKDPIDRIIEFVPTKTPYDPRWMLAGRPHPTQKGQWLSGFFDYGSFSEIMQPWAQTVVVGRARLGGIPVGVVAVETRTVELSIPADPANLDSEAKLQRFKRSLSLKTILRSKSLENFFLRSGSELKCPTEVLLTPPTPLPPPSPPPTASDRGLATPSPSPCPVPRPLAALKPVRLHSFQEHVFKRASPCELCHQLIVGNSKQGLRCKMCKVSVHLWCSEEISHQQCPGKTSTSFRRNFSSPLLVHEPPPVCATSKESPPTGDSGKVDPVYETLRYGTSLALMNRSSFSSTSESPTRSLSERDELTEDGEGSIRSSEEGPGDSASPVFTAPAESEGPGPEEKSPGQQLPKATLRKDVGPMYSYVALYKFLPQENNDLALQPGDRIMLVDDSNEDWWKGKIGDRVGFFPANFVQRVRPGENVWRCCQPFSGNKEQGYMSLKENQICVGVGRSKDADGFIRVSSGKKRGLVPVDALTEI:ENST00000335166-ENST00000333461, MWWSTLMSILRARSFWKWISTQTVRIIRAVRAHFGGIMDEPSPLAQPLELNQHSRFIIGSVSEDNSEDEISNLVKLDLLEEKEGSLSPASVGSDTLSDLGISSLQDGLALHIRSSMSGLHLVKQGRDRKKIDSQRDFTVASPAEFVTRFGGNKVIEKVLIANNGIAAVKCMRSIRRWSYEMFRNERAIRFVVMVTPEDLKANAEYIKMADHYVPVPGGPNNNNYANVELILDIAKRIPVQAVWAGWGHASENPKLPELLLKNGIAFMGPPSQAMWALGDKIASSIVAQTAGIPTLPWSGSGLRVDWQENDFSKRILNVPQELYEKGYVKDVDDGLQAAEEVGYPVMIKASEGGGGKGIRKVNNADDFPNLFRQVQAEVPGSPIFVMRLAKQSRHLEVQILADQYGNAISLFGRDCSVQRRHQKIIEEAPATIATPAVFEHMEQCAVKLAKMVGYVSAGTVEYLYSQDGSFYFLELNPRLQVEHPCTEMVADVNLPAAQLQIAMGIPLYRIKDIRMMYGVSPWGDSPIDFEDSAHVPCPRGHVIAARITSENPDEGFKPSSGTVQELNFRSNKNVWGYFSVAAAGGLHEFADSQFGHCFSWGENREEAISNMVVALKELSIRGDFRTTVEYLIKLLETESFQMNRIDTGWLDRLIAEKVQAERPDTMLGVVCGALHVADVSLRNSVSNFLHSLERGQVLPAHTLLNTVDVELIYEGVKYVLKVTRQSPNSYVVIMNGSCVEVDVHRLSDGGLLLSYDGSSYTTYMKEEVDRYRITIGNKTCVFEKENDPSVMRSPSAGKLIQYIVEDGGHVFAGQCYAEIEVMKMVMTLTAVESGCIHYVKRPGAALDPGCVLAKMQLDNPSKVQQAELHTGSLPRIQSTALRGEKLHRVFHYVLDNLVNVMNGYCLPDPFFSSKVKDWVERLMKTLRDPSLPLLELQDIMTSVSGRIPPNVEKSIKKEMAQYASNITSVLCQFPSQQIANILDSHAATLNRKSEREVFFMNTQSIVQLVQRYRSGIRGHMKAVVMDLLRQYLRVETQFQNGHYDKCVFALREENKSDMNTVLNYIFSHAQVTKKNLLVTMLIDQLCGRDPTLTDELLNILTELTQLSKTTNAKVALRARQVLIASHLPSYELRHNQVESIFLSAIDMYGHQFCIENLQKLILSETSIFDVLPNFFYHSNQVVRMAALEVYVRRAYIAYELNSVQHRQLKDNTCVVEFQFMLPTSHPNRGNIPTLNRMSFSSNLNHYGMTHVASVSDVLLDNSFTPPCQRMGGMVSFRTFEDFVRIFDEVMGCFSDSPPQSPTFPEAGHTSLYDEDKVPRDEPIHILNVAIKTDCDIEDDRLAAMFREFTQQNKATLVDHGIRRLTFLVAQKDFRKQVNYEVDRRFHREFPKFFTFRARDKFEEDRIYRHLEPALAFQLELNRMRNFDLTAIPCANHKMHLYLGAAKVEVGTEVTDYRFFVRAIIRHSDLVTKEASFEYLQNEGERLLLEAMDELEVAFNNTNVRTDCNHIFLNFVPTVIMDPSKIEESVRSMVMRYGSRLWKLRVLQAELKINIRLTPTGKAIPIRLFLTNESGYYLDISLYKEVTDSRTAQIMFQAYGDKQGPLHGMLINTPYVTKDLLQSKRFQAQSLGTTYIYDIPEMFRQSLIKLWESMSTQAFLPSPPLPSDMLTYTELVLDDQGQLVHMNRLPGGNEIGMVAWKMTFKSPEYPEGRDIIVIGNDITYRIGSFGPQEDLLFLRASELARAEGIPRIYVSANSGARIGLAEEIRHMFHVAWVDPEDPYKGYRYLYLTPQDYKRVSALNSVHCEHVEDEGESRYKITDIIGKEEGIGPENLRGSGMIAGESSLAYNEIITISLVTCRAIGIGAYLVRLGQRTIQVENSHLILTGAGALNKVLGREVYTSNNQLGGIQIMHNNGVTHCTVCDDFEGVFTVLHWLSYMPKSVHSSVPLLNSKDPIDRIIEFVPTKTPYDPRWMLAGRPHPTQKGQWLSGFFDYGSFSEIMQPWAQTVVVGRARLGGIPVGVVAVETRTVELSIPADPANLDSEAKLQRFKRSLSLKTILRSKSLENFFLRSGSELKCPTEVLLTPPTPLPPPSPPPTASDRGLATPSPSPCPVPRPLAALKPVRLHSFQEHVFKRASPCELCHQLIVGNSKQGLRCKMCKVSVHLWCSEEISHQQCPGKTSTSFRRNFSSPLLVHEPPPVCATSKESPPTGDSGKVDPVYETLRYGTSLALMNRSSFSSTSESPTRSLSERDELTEDGEGSIRSSEEGPGDSASPVFTAPAESEGPGPEEKSPGQQLPKATLRKDVGPMYSYVALYKFLPQENNDLALQPGDRIMLVDDSNEDWWKGKIGDRVGFFPANFVQRVRPGENVWRCCQPFSGNKEQGYMSLKENQICVGVGRSKDADGFIRVSSGKKRGLVPVDALTEI:ENST00000353139-ENST00000333461, 	49:ENST00000353139, 48:ENST00000335166, 	2:ENST00000333461, 	CDS:ENST00000353139,ENST00000335166, 	CDS:ENST00000333461, 	NO_DOMAIN:ENST00000353139,ENST00000335166, 	NO_DOMAIN:ENST00000353139,ENST00000335166, 	Domain=SH3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00192,:ENST00000333461, 	NO_DOMAIN:ENST00000333461, 
0.0002	4879	SRR064439	defuse	6	5	2	5	232571605	232578251	134240596	134343649	+	+	PTMA	PCBD2	232576642	134260383	ENSG00000187514|	ENSG00000132570|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000410064,ENST00000341369,ENST00000358839,	ENST00000398833,ENST00000512783,ENST00000254908,	FrameShift 	1:ENST00000410064,ENST00000341369,ENST00000358839, 	234:ENST00000358839, 210:ENST00000341369, 236:ENST00000410064, 	-1:ENST00000398833,ENST00000512783,ENST00000254908, 	-1:ENST00000398833,ENST00000512783,ENST00000254908, 	MQTFGPAGVAAVGRRVESPADRRATRARATASSACRPGVSKDLKEKKEVVEEAENGRDAPANGNAVSVCFAPEPWQLPPHKIFPVLL*:ENST00000410064-ENST00000398833,ENST00000410064-ENST00000512783,ENST00000410064-ENST00000254908, MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAVSVCFAPEPWQLPPHKIFPVLL*:ENST00000341369-ENST00000398833,ENST00000341369-ENST00000512783,ENST00000341369-ENST00000254908, MQTFGPAGVAAVGRRVESPADRRATRARACKLCLPAGSLQGLKGEEGVEEAENGRDAPANGNAVSVCFAPEPWQLPPHKIFPVLL*:ENST00000358839-ENST00000254908,ENST00000358839-ENST00000398833,ENST00000358839-ENST00000512783, 	3:ENST00000410064,ENST00000341369, 5:ENST00000358839, 	Intron:ENST00000398833,ENST00000512783,ENST00000254908, 	CDS:ENST00000410064,ENST00000341369,ENST00000358839, 	CDS:ENST00000398833,ENST00000512783,ENST00000254908, 	NO_DOMAIN:ENST00000410064,ENST00000341369,ENST00000358839, 	NO_DOMAIN:ENST00000410064,ENST00000341369,ENST00000358839, 	NO_DOMAIN:ENST00000398833,ENST00000512783,ENST00000254908, 	NO_DOMAIN:ENST00000398833,ENST00000512783,ENST00000254908, 
0.0001	4880	SRR064439	defuse	42	1790	17	11	33474836	33516364	83166055	85338966	+	-	UNC45B	DLG2	33478306	85195011	ENSG00000141161|	ENSG00000150672|	breast_cancer	SRR064437,SRR064439,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE	ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570,	ENST00000376104,	FrameShift 	1:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	481:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	-1:ENST00000376104, 	-1:ENST00000376104, 	MAEVEAVQLKEEGNRHFQLQDYKAATNSYSQALKLTKDKALLATLYRNRAACGLKTESYVQAASDASRAIDINSSDIKALYRRCQALEHLGKLDQAFKDVQRCATLEPRNQNFQEMLRRLNTSIQEKVSWASSHNPWLPSPSLHS*:ENST00000268876-ENST00000376104,ENST00000433649-ENST00000376104,ENST00000378449-ENST00000376104,ENST00000394570-ENST00000376104, 	Intron:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	Intron:ENST00000376104, 	CDS:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	CDS:ENST00000376104, 	NO_DOMAIN:ENST00000378449,ENST00000433649, Repeat=TPR 1,Repeat=TPR 2,Repeat=TPR 3,Repeat=ARM 1,Repeat=ARM 2,:ENST00000268876,ENST00000394570, 	NO_DOMAIN:ENST00000378449,ENST00000433649, Repeat=ARM 3,:ENST00000268876,ENST00000394570, 	NO_DOMAIN:ENST00000376104, 	Domain=PDZ 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=PDZ 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=PDZ 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=SH3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00192,Domain=Guanylate kinase-like;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00100,:ENST00000376104, 
0.0002	4881	SRR064439	defuse	7	6	1	5	565020	566063	177482605	177483195	+	+	RP5-857K21.8	RP11-889L3.1	565844	177482905	ENSG00000225630|	ENSG00000218227|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0004	4882	SRR064439	defuse	5	9	11	1	61583728	61634826	565020	566063	+	+	FADS2	RP5-857K21.8	61632715	565799	ENSG00000134824|	ENSG00000225630|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000257261,	UnSpec,	FrameShift 	1:ENST00000257261, 	849:ENST00000257261, 	-1:UnSpec, 	-1:UnSpec, 	MHGREAGPFVCVCVLLASIPTPQTPLLQASLPPFHPASAGHPITGQQDAFRAFHPDLEFVGKFLKPLLIGELAPEEPSQDHGKNSKITEDFRALRKTAEDMNLFKTNHVFFLLLLAHIIALESIAWFTVFYFGNGWIPTLITAFVLATSQAQAGWLQHDYGHLSVYRKPKWNHLVHKFVIGHLKGASANWWNHRHFQHHAKPNIFHKDPDVNMLHVFVLGEWQPIEYGKKKLKYLPYNHQHEYFFLIGPPLLIPMYFQYQIIMTMIVHKNWVDLAWAVSYYIRFFITYIPFYGILGALLFLNFIRFLESHWFVWVTQMNHIVMEIDQEAYRDWFSSQLTATCNVEQSFFNDWFSGHLNFQIEHQ*:ENST00000257261-UnSpec, 	11:ENST00000257261, 	-1:UnSpec, 	CDS:ENST00000257261, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000257261, 	DOMAIN_UNK:ENST00000257261, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4883	SRR064439	defuse	5	5	5	1	179041179	179061785	565020	566063	-	+	HNRNPH1	RP5-857K21.8	179045038	565818	ENSG00000169045|	ENSG00000225630|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000329433,	UnSpec,	UnSpec 	1:ENST00000329433, 	246:ENST00000329433, 	-1:UnSpec, 	-1:UnSpec, 	MMLGTEGGEGFVVKVRGLPWSCSADEVQRFFSDCKIQNGAQGIRFIYTREGRPSGEAFVELESEDEVKLALKKDRETMGHRYVEVFKSNNVEMDWVLKHTGPNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGLEIVPNGITLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRYIEIFKSSRAEVRTHYDPPRKLMAMQRPGPYDRPGAGRGYNSIGRGAGFERMRRGAYGGGYGGYDDY:ENST00000329433-UnSpec, 	6:ENST00000329433, 	-1:UnSpec, 	CDS:ENST00000329433, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000329433, 	DOMAIN_UNK:ENST00000329433, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4884	SRR064439	defuse	8	31	MT	MT	577	647	14747	15887	+	+	J01415.2	MT-CYB	367	15266	ENSG00000210049|	ENSG00000198727|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4885	SRR064439	defuse	11	11	MT	MT	12337	14148	8366	8572	+	+	MT-ND5	J01415.25	14190	8497	ENSG00000198786|	ENSG00000228253|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0001	4886	SRR064439	defuse	6	101	5	19	179224597	179233952	24184075	24184165	-	-	MGAT4B	AC092279.1	179233755	24184151	ENSG00000161013|	ENSG00000251948|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000292591,	UnSpec,	UnSpec 	0:ENST00000292591, 	0:ENST00000292591, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000292591-UnSpec, 	Intron:ENST00000292591, 	Intron:UnSpec, 	5UTR:ENST00000292591, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000292591, 	DOMAIN_UNK:ENST00000292591, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4887	SRR064439	defuse	7	54	1	2	108113461	108113552	230045488	230045666	-	-	AC114491.2	AC006368.1	108113125	230045505	ENSG00000252194|	ENSG00000241530|	breast_cancer	SRR064439,SRR064441,	breast_cancer,	NO_KINASE																
0.0002	4888	SRR064439	defuse	57	18	12	9	34372314	34372611	79186649	79186950	-	+	AC140847.1	AL161626.1	34372630	79186543	ENSG00000243092|	ENSG00000241781|	breast_cancer	SRR064439,SRR064441,	breast_cancer,	NO_KINASE																
0.0001	4889	SRR064439	defuse	5	2	17	1	16284113	16286054	536816	659930	+	-	UBB	RP5-857K21.4	16284435	569341	ENSG00000170315|	ENSG00000230021|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000302182,	UnSpec,	UnSpec 	0:ENST00000302182, 	0:ENST00000302182, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000302182-UnSpec, 	Intron:ENST00000302182, 	Intron:UnSpec, 	5UTR:ENST00000302182, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000302182, 	DOMAIN_UNK:ENST00000302182, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0003	4890	SRR064439	defuse	37	30	1	2	91726323	91870426	159313476	159539391	-	+	HFM1	PKP4	91852816	159440791	ENSG00000162669|	ENSG00000144283|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000370421,	UnSpec,	FrameShift 	1:ENST00000370421, 	2442:ENST00000370421, 	-1:UnSpec, 	-1:UnSpec, 	MLKSNDCLFSLENLFFEKPDEVENHPDNEKSLDWFLPPAPLISEIPDTQELEEELESHKLLGQEKRPKMLTSNLKITNEDTNYISLTQKFQFAFPSDKYEQDDLNLEGVGNNDLSHIAGKLTYASQKYKNHIGTEIAPEKSVPDDTKLVNFAEDKGESTSVFRKR*:ENST00000370421-UnSpec, 	Intron:ENST00000370421, 	-1:UnSpec, 	CDS:ENST00000370421, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4891	SRR064439	defuse	9	10	MT	MT	3307	4262	14149	14673	+	-	MT-ND1	MT-ND6	4058	14450	ENSG00000198888|	ENSG00000198695|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0001	4892	SRR064439	defuse	5	26	17	1	36452990	36479101	536816	659930	+	-	MRPL45	RP5-857K21.4	36478557	570016	ENSG00000174100|	ENSG00000230021|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000312513,	UnSpec,	UnSpec 	0:ENST00000312513, 	0:ENST00000312513, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000312513-UnSpec, 	Intron:ENST00000312513, 	Intron:UnSpec, 	3UTR:ENST00000312513, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000312513, 	DOMAIN_UNK:ENST00000312513, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4893	SRR064439	defuse	19	42	5	1	71146740	71146942	108113461	108113552	+	-	AC116340.1	AC114491.2	71146747	108113304	ENSG00000239935|	ENSG00000252194|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0004	4894	SRR064439	defuse	22	13	17	20	37913968	38020441	56964178	57026157	-	+	IKZF3	VAPB	37934020	56964573	ENSG00000161405|	ENSG00000124164|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000351680,ENST00000346872,ENST00000488188,	ENST00000520497,ENST00000475243,ENST00000395802,	FrameShift 	1:ENST00000351680,ENST00000346872,ENST00000488188, 	197:ENST00000351680, 141:ENST00000346872, 236:ENST00000488188, 	-1:ENST00000520497,ENST00000475243,ENST00000395802, 	-1:ENST00000520497,ENST00000475243,ENST00000395802, 	MEDIQTNAELKSTQEQSVPAESAAVLNDYSLTKSHEMENVDSGEGPANEDEDIGDDSMKVKDEYSERDENVLKSEPMGNAEEPEIPYSYSREYNEYENIKLERHVVSFDSSRPTSGKMNCDVCGLSCISFNVLMVHKRSHTGERPFQCNQCGASFTQKGNLLRHIKLHTGEKPFKCHLCNYACQRRDALTGHLRTHSVEKPYKCEFCGRSYKQRSSLEEHKERCRTFLQSTDPGDTAVPSPMLSPPT*:ENST00000488188-ENST00000520497,ENST00000488188-ENST00000395802,ENST00000488188-ENST00000475243, MEDIQTNAELKSTQEQSVPAESAAVLNDYSLTKSHEMENVDSGEGPANEDEDIGDDSMKVKDEYSERDENVLKSEPMGNAEEPEIPYSYSREYNEYENIKLERHVVSFDSSRPTSGKMNCDVCGLSCISFNVLMVHKRSHTGERPFQCNQCGASFTQKGNLLRHIKLHTGEKPFKCHLCNYACQRRDALTGHLRTHSAVPSPMLSPPT*:ENST00000351680-ENST00000395802,ENST00000351680-ENST00000520497,ENST00000351680-ENST00000475243, MEDIQTNAELKSTQEQSVPAESAAVLNDYSLTKSHEMENVDSGEGPANEDEDIGDDSMKVKDEYSERDENVLKSEPMGNAEEPEIPYSYSREYNEYENIKLERHVVSFDSSRPTSGKMNCDVCGLSCISFNVLMVHKRSHTAVPSPMLSPPT*:ENST00000346872-ENST00000395802,ENST00000346872-ENST00000475243,ENST00000346872-ENST00000520497, 	6:ENST00000351680, 7:ENST00000488188, 5:ENST00000346872, 	1:ENST00000520497,ENST00000475243,ENST00000395802, 	CDS:ENST00000351680,ENST00000346872,ENST00000488188, 	CDS:ENST00000520497,ENST00000475243,ENST00000395802, 	NO_DOMAIN:ENST00000351680,ENST00000346872,ENST00000488188, 	NO_DOMAIN:ENST00000351680,ENST00000346872,ENST00000488188, 	NO_DOMAIN:ENST00000520497,ENST00000475243,ENST00000395802, 	Domain=MSP;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50202,:ENST00000520497, Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=MSP;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00132,:ENST00000475243,ENST00000395802, 
0.0002	4895	SRR064439	defuse	6	12	18	18	34376035	34409158	33877702	34360018	-	+	C18orf10	FHOD3	34378412	34367042	ENSG00000134779|	ENSG00000134775|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000334295,	UnSpec,	UnSpec 	1:ENST00000334295, 	219:ENST00000334295, 	-1:UnSpec, 	-1:UnSpec, 	MEEEASSPGLGCSKPHLEKLTLGITRILESSPGVTEVTIIEKPPAERHMISSWEQKNNCVMPEDVKNFYLMTNGFHMTWSVKLDEHIIPLGSMAINSISKLTQLTQSSMYSLPNAPTLADLEDDTHEASDDQPEKPHFDSRSVIFELDSCNGSGKVCLVYKSGKPALAEDTEIWFLDRALYWHFLTDTFTAYYRLLITHLGLPQWQYAFTSYGISPQAK:ENST00000334295-UnSpec, 	6:ENST00000334295, 	-1:UnSpec, 	CDS:ENST00000334295, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000334295, 	DOMAIN_UNK:ENST00000334295, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0004	4896	SRR064439	defuse	6	22	11	1	75110530	75133324	536816	659930	+	-	RPS3	RP5-857K21.4	75115086	569767	ENSG00000149273|	ENSG00000230021|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000278572,	UnSpec,	FrameShift 	1:ENST00000278572, 	648:ENST00000278572, 	-1:UnSpec, 	-1:UnSpec, 	MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR*:ENST00000278572-UnSpec, 	5:ENST00000278572, 	-1:UnSpec, 	CDS:ENST00000278572, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000278572, 	DOMAIN_UNK:ENST00000278572, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0004	4897	SRR064439	defuse	7	30	19	1	13049414	13055304	536816	659930	+	-	CALR	RP5-857K21.4	13054352	568203	ENSG00000179218|	ENSG00000230021|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000316448,	UnSpec,	FrameShift 	1:ENST00000316448, 	1203:ENST00000316448, 	-1:UnSpec, 	-1:UnSpec, 	MLLSVPLLLGLLGLAVAEPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDASKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVRLGGKRRIPGVPQVHKITQEERDRVGTPGESDSKMVLLVNSTSWSVPVKSSQQPL*:ENST00000316448-UnSpec, 	8:ENST00000316448, 	-1:UnSpec, 	CDS:ENST00000316448, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000316448, 	DOMAIN_UNK:ENST00000316448, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0004	4898	SRR064439	defuse	7	2	2	X	188328957	188430487	49126306	49157929	-	+	TFPI	PPP1R3F	188384222	49127226	ENSG00000003436|	ENSG00000049769|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000233156,	ENST00000055335,	FrameShift 	-1:ENST00000233156, 	-1:ENST00000233156, 	-1:ENST00000055335, 	-1:ENST00000055335, 	MKISPSL*:ENST00000233156-ENST00000055335, 	Intron:ENST00000233156, 	1:ENST00000055335, 	5UTR:ENST00000233156, 	CDS:ENST00000055335, 	DOMAIN_UNK:ENST00000233156, 	DOMAIN_UNK:ENST00000233156, 	NO_DOMAIN:ENST00000055335, 	Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=CBM21;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00491,:ENST00000055335, 
0.0002	4899	SRR064439	defuse	16	84	14	1	42769954	42770065	91726323	91870426	+	-	AL445074.1	HFM1	43723013	91853147	ENSG00000222084|	ENSG00000162669|	breast_cancer	SRR064439,SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000370421,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000370421, 	-1:ENST00000370421, 	PGTVPGGEFDWGCTPVKR*:UnSpec-ENST00000370421, 	-1:UnSpec, 	Intron:ENST00000370421, 	Intergenic:UnSpec, 	CDS:ENST00000370421, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:ENST00000370421, 
0.0002	4900	SRR064439	defuse	7	24	MT	MT	14149	14673	8527	9207	-	+	MT-ND6	MT-ATP6	14578	8569	ENSG00000198695|	ENSG00000198899|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4901	SRR064439	defuse	6	204	8	1	70584568	70747299	91726323	91870426	-	-	SLCO5A1	HFM1	70602280	91853148	ENSG00000137571|	ENSG00000162669|	breast_cancer	SRR064439,SRR064441,	breast_cancer,	NO_KINASE	ENST00000260126,	ENST00000370424,ENST00000370425,ENST00000370421,	FrameShift 	1:ENST00000260126, 	5536:ENST00000260126, 	-1:ENST00000370424,ENST00000370425,ENST00000370421, 	-1:ENST00000370424,ENST00000370425,ENST00000370421, 	MDEGTGLQPGAGEQLEAPATAEAVQERCEPETLRSKSLPVLSSASCRPSLSPTSGDANPAFGCVDSSGHQELKQGPNPLAPSPSAPSTSAGLGDCNHRVDLSKTFSVSSALAMLQERRCLYVVLTDSRCFLVCMCFLTFIQALMVSGYLSSVITTIERRYSLKSSESGLLVSCFDIGNLVVVVFVSYFGGRGRRPLWLAVGGLLIAFGAALFALPHFISPPYQIQELNASAPNDGLCQGGNSTATLEPPACPKDSGGNNHWVYVALFICAQILIGMGSTPIYTLGPTYLDDNVKKENSSLYLAIMYVMGALGPAVGYLLGGLLIGFYVDPRNPVHLDQNDPRFIGNWWSGFLLCAIAMFLVIFPMFTFPKKLPPRHKKKKKKKFSVDAVSDDDVLKEKSNNSEQADKKVSSMGFGKDVRDLPRAAVRILSNMTFLFVSLSYTAESAIVTAFITFIPKFIESQFGIPASNASIYTGVIIVPSAGVGIVLGGYIIKKLKLGARESAKLAMICSGVSLLCFSTLFIVGCESINLGGINIPYTTG*:ENST00000260126-ENST00000370425,ENST00000260126-ENST00000370424,ENST00000260126-ENST00000370421, 	Intron:ENST00000260126, 	Intron:ENST00000370424,ENST00000370425,ENST00000370421, 	CDS:ENST00000260126, 	CDS:ENST00000370424,ENST00000370425,ENST00000370421, 	Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=Kazal-like;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00798,:ENST00000260126, 	NO_DOMAIN:ENST00000260126, 	NO_DOMAIN:ENST00000370424,ENST00000370425,ENST00000370421, 	Domain=Helicase ATP-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00541,Domain=Helicase C-terminal;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00542,Domain=SEC63,:ENST00000370425, NO_DOMAIN:ENST00000370424,ENST00000370421, 
0.0002	4902	SRR064439	defuse	6	13	1	6	566454	567996	39926153	39926572	+	-	RP5-857K21.6	RP1-278E11.3	566884	39926543	ENSG00000237973|	ENSG00000180211|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0004	4903	SRR064439	defuse	5	6	19	1	49990811	49995565	536816	659930	+	-	RPL13A	RP5-857K21.4	49994799	568464	ENSG00000142541|	ENSG00000230021|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000391857,	UnSpec,	FrameShift 	1:ENST00000391857, 	281:ENST00000391857, 	-1:UnSpec, 	-1:UnSpec, 	MAEVQVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKVSPSLRCTIYLGDFRPAEGPGDLEPGR*:ENST00000391857-UnSpec, 	7:ENST00000391857, 	-1:UnSpec, 	CDS:ENST00000391857, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000391857, 	DOMAIN_UNK:ENST00000391857, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0013	4904	SRR064439	defuse	5	2	17	17	58755172	59470198	60019967	60142643	+	-	BCAS3	MED13	59469338	60129898	ENSG00000141376|	ENSG00000108510|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000390652,	ENST00000262436,ENST00000397786,	FrameShift 	1:ENST00000390652, 	8707:ENST00000390652, 	-1:ENST00000262436,ENST00000397786, 	-1:ENST00000262436,ENST00000397786, 	MNEAMATDSPRRPSRCTGGVVVRPQAVTEQSYMESVVTFLQDVVPQAYSGTPLTEEKEKIVWVRFENADLNDTSRNLEFHEIHSTGNEPPLLIMIGYSDGMQVWSIPISGEAQELFSVRHGPIRAARILPAPQFGAQKCDNFAEKRPLLGVCKSIGSSGTSPPYCCVDLYSLRTGEMVKSIQFKTPIYDLHCNKRILVVVLQEKIAAFDSCTFTKKFFVTSCYPCPGPNMNPIALGSRWLAYAENKLIRCHQSRGGACGDNIQSYTATVISAAKTLKSGLTMVGKVVTQLTGTLPSGVTEDDVAIHSNSRRSPLVPGIITVIDTETVGEGQVLVSEDSDSDGIVAHFPAHEKPVCCMAFNTSGMLLVTTDTLGHDFHVFQILTHPWSSSQCAVHHLYTLHRGETEAKVQDICFSHDCRWVVVSTLRGTSHVFPINPYGGQPCVRTHMSPRVVNRMSRFQKSAGLEEIEQELTSKQGGRCSPVPGLSSSPSGSPLHGKLNSQDSYNNFTNNNPGNPRLSPLPSLMVVMPLAQIKQPMTLGTITKRTGPYLFGAGCFSIKAPCKVKPPPQISPSKSMGGEFCVAAIFGTSRSWFANNAGLKREKDQSKQVVVESLYIISCYGTLVEHMMEPRPLSTAPKISDDTPLEMMTSPRASWTLVRTPQWNELQPPFNANHPLLLAADAVQYYQFLLAGLVPPGSPGPITRHGSYDSLASDHSGQEDEEWLSQVEIVTHTGPHRRLWMGPQFQFKTIHPSGQTTVISSSSSVLQSHGPSDTPQPLLDFDTDDLDLNSLRIQPVRSDPVSMPGSSRPVSDRRGVSTVIDAASGTFDRSVTLLEVCGSWPEGFGLRHMSSMEHTEEGLRERLADAMAESPSRDVVGSGTGKGVIRLLA*:ENST00000390652-ENST00000262436,ENST00000390652-ENST00000397786, 	24:ENST00000390652, 	3:ENST00000397786, 5:ENST00000262436, 	CDS:ENST00000390652, 	CDS:ENST00000262436,ENST00000397786, 	Repeat=WD 1,Repeat=WD 2,Repeat=WD 3,Repeat=WD 4,Repeat=WD 5,Repeat=WD 6,Repeat=WD 7,:ENST00000390652, 	NO_DOMAIN:ENST00000390652, 	NO_DOMAIN:ENST00000262436,ENST00000397786, 	NO_DOMAIN:ENST00000262436,ENST00000397786, 
0.0002	4905	SRR064439	defuse	7	10	12	5	49521569	49525304	134240596	134343649	-	+	TUBA1B	PCBD2	49521960	134263529	ENSG00000123416|	ENSG00000132570|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000336023,	ENST00000398833,ENST00000512783,ENST00000254908,	FrameShift 	1:ENST00000336023, 	379:ENST00000336023, 	-1:ENST00000398833,ENST00000512783,ENST00000254908, 	-1:ENST00000398833,ENST00000512783,ENST00000254908, 	MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS*:ENST00000336023-ENST00000254908,ENST00000336023-ENST00000398833,ENST00000336023-ENST00000512783, 	4:ENST00000336023, 	Intron:ENST00000398833,ENST00000512783,ENST00000254908, 	CDS:ENST00000336023, 	CDS:ENST00000398833,ENST00000512783,ENST00000254908, 	NO_DOMAIN:ENST00000336023, 	NO_DOMAIN:ENST00000336023, 	NO_DOMAIN:ENST00000398833,ENST00000512783,ENST00000254908, 	NO_DOMAIN:ENST00000398833,ENST00000512783,ENST00000254908, 
0.0002	4906	SRR064439	defuse	28	74	19	13	24184075	24184165	36343122	36705467	-	-	AC092279.1	DCLK1	24184148	36705699	ENSG00000251948|	ENSG00000133083|	breast_cancer	SRR064439,	breast_cancer,	3p_KINASE																
0.0002	4907	SRR064439	defuse	6	27	1	4	536816	659930	106405855	106407237	-	+	RP5-857K21.4	AC004066.1	568203	106405789	ENSG00000230021|	ENSG00000249264|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4908	SRR064439	defuse	6	5	2	2	11584501	11606297	11674242	11782914	-	+	E2F6	GREB1	11625343	11696580	ENSG00000169016|	ENSG00000196208|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0004	4909	SRR064439	defuse	5	9	2	1	232571605	232578251	566454	567996	+	+	PTMA	RP5-857K21.6	232576639	566918	ENSG00000187514|	ENSG00000237973|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000341369,	UnSpec,	FrameShift 	1:ENST00000341369, 	209:ENST00000341369, 	-1:UnSpec, 	-1:UnSpec, 	MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAVSVCFAPEPWQLPPHKIFPVLL*:ENST00000341369-UnSpec, 	3:ENST00000341369, 	-1:UnSpec, 	CDS:ENST00000341369, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000341369, 	DOMAIN_UNK:ENST00000341369, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4910	SRR064439	defuse	5	5	2	1	242166679	242256476	536816	659930	-	-	HDLBP	RP5-857K21.4	242206304	569482	ENSG00000115677|	ENSG00000230021|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000427183,	UnSpec,	UnSpec 	1:ENST00000427183, 	29:ENST00000427183, 	-1:UnSpec, 	-1:UnSpec, 	MHLAERDRWLFVATVMMHFVSIKSGFPGL:ENST00000427183-UnSpec, 	2:ENST00000427183, 	-1:UnSpec, 	CDS:ENST00000427183, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000427183, 	DOMAIN_UNK:ENST00000427183, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4911	SRR064439	defuse	6	2	17	1	39679869	39684560	178694300	179065553	-	+	KRT19	RALGPS2	39684234	179052718	ENSG00000171345|	ENSG00000116191|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000361566,	UnSpec,	UnSpec 	1:ENST00000361566, 	88:ENST00000361566, 	-1:UnSpec, 	-1:UnSpec, 	MTSYSYRQSSATSSFGGLGGGSVRFGPGVAFRAPSIHGGSGGRGVSVSSARFVSSSSSGAYGGGYGGVLTASDGLLAGNEKLTMQNLN:ENST00000361566-UnSpec, 	1:ENST00000361566, 	-1:UnSpec, 	CDS:ENST00000361566, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000361566, 	DOMAIN_UNK:ENST00000361566, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0001	4912	SRR064439	defuse	13	22	16	1	30064444	30081741	536816	659930	+	-	ALDOA	RP5-857K21.4	30081705	569765	ENSG00000149925|	ENSG00000230021|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000338110,	UnSpec,	UnSpec 	0:ENST00000338110, 	0:ENST00000338110, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000338110-UnSpec, 	Intron:ENST00000338110, 	Intron:UnSpec, 	3UTR:ENST00000338110, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000338110, 	DOMAIN_UNK:ENST00000338110, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4913	SRR064439	defuse	55	864	5	2	71146740	71146942	133038647	133038738	+	-	AC116340.1	AC097532.1	71146755	133038453	ENSG00000239935|	ENSG00000252318|	breast_cancer	SRR064437,SRR064439,SRR064440,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	4914	SRR064439	defuse	34	34	MT	MT	577	647	5904	7445	+	+	J01415.2	MT-CO1	379	6334	ENSG00000210049|	ENSG00000198804|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0001	4915	SRR064439	defuse	6	1	9	4	131873229	131911225	40812044	41218731	+	-	PPP2R4	APBB2	131910713	41218701	ENSG00000119383|	ENSG00000163697|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000337738,	UnSpec,	UnSpec 	0:ENST00000337738, 	0:ENST00000337738, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000337738-UnSpec, 	Intron:ENST00000337738, 	Intron:UnSpec, 	3UTR:ENST00000337738, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000337738, 	DOMAIN_UNK:ENST00000337738, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4916	SRR064439	defuse	6	12	1	16	536816	659930	33961052	33962503	-	-	RP5-857K21.4	NCRNA00273	569215	33963877	ENSG00000230021|	ENSG00000256642|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4917	SRR064439	defuse	6	8	MT	MT	14149	14673	5904	7445	-	+	MT-ND6	MT-CO1	14580	6335	ENSG00000198695|	ENSG00000198804|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0004	4918	SRR064439	defuse	22	14	20	20	45837859	45985567	34042985	34099804	-	+	ZMYND8	CEP250	45852970	34078463	ENSG00000101040|	ENSG00000126001|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	5p_KINASE	ENST00000311275,ENST00000471951,ENST00000396281,ENST00000262975,	ENST00000356095,ENST00000397527,	FrameShift 	1:ENST00000311275,ENST00000471951,ENST00000396281,ENST00000262975, 	1020:ENST00000262975, 1086:ENST00000471951, 1065:ENST00000311275,ENST00000396281, 	-1:ENST00000356095,ENST00000397527, 	-1:ENST00000356095,ENST00000397527, 	MHPQSLAEEEIKTEQEVVEGMDISTRSKDPGSAERTAQKRKFPSPPHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKEQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYLAACQKRDNWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVENIRRKFGVFNYSPFRTPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVKLNFDMTASPKILMSKPVLSGGTGRRISLSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLGHRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSSKFQTSSQKWHMQKMQRQQQQQQQQNQQQQPQSSQGTRYQTRQAVKAVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSGEGALLAPAGAGKGSGELRKGKNGAGNEAKGAADRNGGHPGPEGRRTDPGRECPMPDAAGNREGESIPPGDTAADAEGASRCQPTTGTTEAGHESPEIKGAGDHWDTTDPAPGGSTGAEGGSPAAQR*:ENST00000471951-ENST00000356095,ENST00000471951-ENST00000397527, MDISTRSKDPGSAERTAQKRKFPSPPHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKEQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYLAACQKRDNWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVENIRRKFGVFNYSPFRTPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVKLNFDMTASPKILMSKPVLSGGTGRRISLSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLGHRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSGEGALLAPAGAGKGSGELRKGKNGAGNEAKGAADRNGGHPGPEGRRTDPGRECPMPDAAGNREGESIPPGDTAADAEGASRCQPTTGTTEAGHESPEIKGAGDHWDTTDPAPGGSTGAEGGSPAAQR*:ENST00000262975-ENST00000397527,ENST00000262975-ENST00000356095, MDISTRSKDPGSAERTAQKRKFPSPPHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKEQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAECIETQSKAMTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYLAACQKRDNWFCEPCSNPHPLVWAKLKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVENIRRKFGVFNYSPFRTPYTPNSQYQMLLDPTNPSAGTAKIDKQEKVKLNFDMTASPKILMSKPVLSGGTGRRISLSDMPRSPMSTNSSVHTGSDVEQDAEKKATSSHFSASEESMDFLDKSTASPASTKTGQAGSLSGSPKPFSPQLSAPITTKTDKTSTTGSILNLNLDRSKAEMDLKELSESVQQQSTPVPLISPKRQIRSRFQLNLDKTIESCKAQLGINEISEDVYTAVEHSDSEDSEKSDSSDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEKADPGAVKDKASPEPEKDFSEKAKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSPKQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAAGATATTSTSSTVTVTAPAPAATGSPVKKQRPLLPKETAPAVQRVVWNSSSKFQTSSQKWHMQKMQRQQQQQQQQNQQQQPQSSQGTRYQTRQAVKAVQQKEITQSPSTSTITLVTSTQSSPLVTSSGSMSTLVSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSGEGALLAPAGAGKGSGELRKGKNGAGNEAKGAADRNGGHPGPEGRRTDPGRECPMPDAAGNREGESIPPGDTAADAEGASRCQPTTGTTEAGHESPEIKGAGDHWDTTDPAPGGSTGAEGGSPAAQR*:ENST00000396281-ENST00000397527,ENST00000396281-ENST00000356095,ENST00000311275-ENST00000356095,ENST00000311275-ENST00000397527, 	19:ENST00000311275,ENST00000471951,ENST00000396281, 20:ENST00000262975, 	22:ENST00000356095, 21:ENST00000397527, 	CDS:ENST00000311275,ENST00000471951,ENST00000396281,ENST00000262975, 	CDS:ENST00000356095,ENST00000397527, 	Domain=Bromo;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00035,Domain=PWWP;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00162,:ENST00000311275,ENST00000471951,ENST00000396281,ENST00000262975, 	Region=Interacts with PRKCB1,:ENST00000311275,ENST00000471951,ENST00000396281,ENST00000262975, 	NO_DOMAIN:ENST00000356095,ENST00000397527, 	NO_DOMAIN:ENST00000356095,ENST00000397527, 
0.3963	4919	SRR064439	defuse	5	1	13	13	113548692	113754053	113951556	113977987	+	+	MCF2L	LAMP1	113718701	113951788	ENSG00000126217|	ENSG00000185896|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000375591,ENST00000375601,ENST00000375604,ENST00000375597,	ENST00000332556,ENST00000397181,	FrameShift 	1:ENST00000375591,ENST00000375601,ENST00000375604,ENST00000375597, 	1392:ENST00000375601, 1350:ENST00000375591, 1445:ENST00000375604, 1386:ENST00000375597, 	-1:ENST00000332556,ENST00000397181, 	-1:ENST00000332556,ENST00000397181, 	MARVESPVPAARASLTGSCVLGQAMPLRGGAGPSPASHGPTHGPSDPRTCLPGRGAGGMRPHGRGALGCCGLCSFYTCHGAAGDEIMHQDIVPLCAADIQDQLKKRFAYLSGGRGQDGSPVITFPDYPAFSEIPDKEFQNVMTYLTSIPSLQDAGIGFILVIDRRRDKWTSVKASVLRIAASFPANLQLVLVLRPTGFFQRTLSDIAFKFNRDDFKMKVPVSAPRLHPAVAERNSLPSWPICDHRNPRGADFRATRSTKPRRTWREVAPPQCCQKQYNPFFPHPRPQPPPRQRCTEHQPQRGHRVGIPSGRGSRDIHTPRRTTELETLRAESPPGPPARNSAQALPAPQG*:ENST00000375604-ENST00000332556,ENST00000375604-ENST00000397181, MAEKGASRGTLRRLWSLPRRRRGTAGRSRPDEIMHQDIVPLCAADIQDQLKKRFAYLSGGRGQDGSPVITFPDYPAFSEIPDKEFQNVMTYLTSIPSLQDAGIGFILVIDRRRDKWTSVKASVLRIAASFPANLQLVLVLRPTGFFQRTLSDIAFKFNRDDFKMKVPVSAPRLHPAVAERNSLPSWPICDHRNPRGADFRATRSTKPRRTWREVAPPQCCQKQYNPFFPHPRPQPPPRQRCTEHQPQRGHRVGIPSGRGSRDIHTPRRTTELETLRAESPPGPPARNSAQALPAPQG*:ENST00000375601-ENST00000332556,ENST00000375601-ENST00000397181, MTVRRLSLLCRDLWALWLLLKAGADEIMHQDIVPLCAADIQDQLKKRFAYLSGGRGQDGSPVITFPDYPAFSEIPDKEFQNVMTYLTSIPSLQDAGIGFILVIDRRRDKWTSVKASVLRIAASFPANLQLVLVLRPTGFFQRTLSDIAFKFNRDDFKMKVPVSAPRLHPAVAERNSLPSWPICDHRNPRGADFRATRSTKPRRTWREVAPPQCCQKQYNPFFPHPRPQPPPRQRCTEHQPQRGHRVGIPSGRGSRDIHTPRRTTELETLRAESPPGPPARNSAQALPAPQG*:ENST00000375597-ENST00000332556,ENST00000375597-ENST00000397181, MWLSQRVLPPLPFPADAWEPSEVLGIFSQHRSHATTSESLTWTSTGTSDARTGVILQDAGIGFILVIDRRRDKWTSVKASVLRIAASFPANLQLVLVLRPTGFFQRTLSDIAFKFNRDDFKMKVPVSAPRLHPAVAERNSLPSWPICDHRNPRGADFRATRSTKPRRTWREVAPPQCCQKQYNPFFPHPRPQPPPRQRCTEHQPQRGHRVGIPSGRGSRDIHTPRRTTELETLRAESPPGPPARNSAQALPAPQG*:ENST00000375591-ENST00000332556,ENST00000375591-ENST00000397181, 	6:ENST00000375601,ENST00000375604,ENST00000375597, 4:ENST00000375591, 	1:ENST00000332556,ENST00000397181, 	CDS:ENST00000375591,ENST00000375601,ENST00000375604,ENST00000375597, 	CDS:ENST00000332556,ENST00000397181, 	Domain=CRAL-TRIO;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00056,Repeat=Spectrin,Domain=DH;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00062,Domain=PH;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00145,Domain=SH3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00192,:ENST00000375604,ENST00000375597, NO_DOMAIN:ENST00000375591,ENST00000375601, 	NO_DOMAIN:ENST00000375591,ENST00000375601,ENST00000375604,ENST00000375597, 	NO_DOMAIN:ENST00000332556,ENST00000397181, 	NO_DOMAIN:ENST00000397181, Topological domain=Lumenal;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00740,Region=First lumenal domain,Region=Hinge,Region=Second lumenal domain,:ENST00000332556, 
0.0002	4920	SRR064439	defuse	17	8	1	2	536816	659930	132905164	133015542	-	-	RP5-857K21.4	ANKRD30BL	568509	133012912	ENSG00000230021|	ENSG00000163046|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4921	SRR064439	defuse	6	24	MT	MT	12337	14148	8527	9207	+	+	MT-ND5	MT-ATP6	13783	8570	ENSG00000198786|	ENSG00000198899|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4922	SRR064439	defuse	5	15	17	1	37827376	37844310	536816	659930	-	-	AC087491.1	RP5-857K21.4	37828471	569493	ENSG00000255623|	ENSG00000230021|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4923	SRR064439	defuse	11	80	1	1	566454	567996	91726323	91870426	+	-	RP5-857K21.6	HFM1	566909	91853147	ENSG00000237973|	ENSG00000162669|	breast_cancer	SRR064439,SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000370421,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000370421, 	-1:ENST00000370421, 	PGTVPGGEFDWGCTPVKR*:UnSpec-ENST00000370421, 	-1:UnSpec, 	Intron:ENST00000370421, 	Intergenic:UnSpec, 	CDS:ENST00000370421, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:ENST00000370421, 
0.0002	4924	SRR064439	defuse	5	16	9	11	23632104	23632353	65265233	65273940	+	+	SUMO2P2	MALAT1	23528709	65271794	ENSG00000227607|	ENSG00000251562|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4925	SRR064439	defuse	6	1	14	17	105475910	105487425	7093209	7123369	-	-	CDCA4	DLG4	105478210	7115149	ENSG00000170779|	ENSG00000132535|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000336219,ENST00000392590,	ENST00000399506,ENST00000302955,ENST00000293813,ENST00000399510,ENST00000380912,	FrameShift 	1:ENST00000336219,ENST00000392590, 	19:ENST00000336219,ENST00000392590, 	-1:ENST00000399506,ENST00000302955,ENST00000293813,ENST00000399510,ENST00000380912, 	-1:ENST00000399506,ENST00000302955,ENST00000293813,ENST00000399510,ENST00000380912, 	MFARGLKRKCVGHEEDVEGPPPAAASSCRGRRSPRPSAPPPPPTPGTLDIPPTPFPQSPSPSPCRLGTDSPPCVSAWYVPRYGLRPAPPSRTPANIRVQASSAVALPSAWCGVSGLQLLVDRRRGSPLLSFTLTHTPMFWGCKPQFQVILCNWGSGEEGAKGEGTTATPSVSPIPQAFYLF*:ENST00000336219-ENST00000293813,ENST00000336219-ENST00000302955,ENST00000392590-ENST00000302955,ENST00000336219-ENST00000380912,ENST00000392590-ENST00000293813,ENST00000392590-ENST00000399510,ENST00000336219-ENST00000399506,ENST00000392590-ENST00000380912,ENST00000392590-ENST00000399506,ENST00000336219-ENST00000399510, 	2:ENST00000336219,ENST00000392590, 	Intron:ENST00000399506,ENST00000302955,ENST00000293813,ENST00000399510,ENST00000380912, 	CDS:ENST00000336219,ENST00000392590, 	CDS:ENST00000399506,ENST00000302955,ENST00000293813,ENST00000399510,ENST00000380912, 	NO_DOMAIN:ENST00000336219,ENST00000392590, 	Domain=SERTA;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00396,:ENST00000336219,ENST00000392590, 	NO_DOMAIN:ENST00000399506,ENST00000302955,ENST00000293813,ENST00000399510,ENST00000380912, 	Domain=PDZ 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=PDZ 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=PDZ 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=SH3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00192,Domain=Guanylate kinase-like;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00100,:ENST00000399506,ENST00000302955,ENST00000399510, NO_DOMAIN:ENST00000293813,ENST00000380912, 
0.0002	4926	SRR064439	defuse	5	21	MT	MT	10760	12137	7586	8269	+	+	MT-ND4	MT-CO2	11012	7653	ENSG00000198886|	ENSG00000198712|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0004	4927	SRR064439	defuse	10	8	17	1	37356536	37360980	536816	659930	+	-	RPL19	RP5-857K21.4	37358610	569491	ENSG00000108298|	ENSG00000230021|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000225430,	UnSpec,	FrameShift 	1:ENST00000225430, 	383:ENST00000225430, 	-1:UnSpec, 	-1:UnSpec, 	MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSREYLGSVSSPYFLLFSCVRLMITQLC*:ENST00000225430-UnSpec, 	3:ENST00000225430, 	-1:UnSpec, 	CDS:ENST00000225430, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000225430, 	DOMAIN_UNK:ENST00000225430, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4928	SRR064439	defuse	6	4	15	2	41576203	41601901	173020757	173020848	+	-	AC012652.1	snoU13.143	41577563	173030051	ENSG00000247556|	ENSG00000238572|	breast_cancer	SRR064439,SRR064441,	breast_cancer,	NO_KINASE																
0.0002	4929	SRR064439	defuse	5	5	7	7	45022632	45023864	45024977	45025109	-	-	C7orf40	SNORA9	45023646	45026179	ENSG00000232956|	ENSG00000206942|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000438705,	UnSpec,	UnSpec 	1:ENST00000438705, 	46:ENST00000438705, 	-1:UnSpec, 	-1:UnSpec, 	MQVPLTPLWELGLGRVVENADALAIAIVLNNQWSLVPNRGILYFLP:ENST00000438705-UnSpec, 	1:ENST00000438705, 	-1:UnSpec, 	CDS:ENST00000438705, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000438705, 	DOMAIN_UNK:ENST00000438705, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4930	SRR064439	defuse	12	50	1	X	536816	659930	108297361	108297792	-	-	RP5-857K21.4	RN28S1	570108	108297609	ENSG00000230021|	ENSG00000226958|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4931	SRR064439	defuse	11	19	1	2	536816	659930	133038647	133038738	-	-	RP5-857K21.4	AC097532.1	569491	133038820	ENSG00000230021|	ENSG00000252318|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4932	SRR064439	defuse	6	15	MT	MT	10760	12137	4470	5511	+	+	MT-ND4	MT-ND2	11298	5189	ENSG00000198886|	ENSG00000198763|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0004	4933	SRR064439	defuse	8	5	19	1	13049414	13055304	565020	566063	+	+	CALR	RP5-857K21.8	13054573	565886	ENSG00000179218|	ENSG00000225630|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000316448,	UnSpec,	FrameShift 	1:ENST00000316448, 	394:ENST00000316448, 	-1:UnSpec, 	-1:UnSpec, 	MLLSVPLLLGLLGLAVAEPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDASKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKVRPGPGPDVGGGQGWQGARP*:ENST00000316448-UnSpec, 	9:ENST00000316448, 	-1:UnSpec, 	CDS:ENST00000316448, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000316448, 	DOMAIN_UNK:ENST00000316448, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4934	SRR064439	defuse	7	22	MT	MT	14149	14673	8527	9207	-	+	MT-ND6	MT-ATP6	14449	8931	ENSG00000198695|	ENSG00000198899|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4935	SRR064439	defuse	31	9	5	18	14652050	14653438	45357922	45457515	-	-	CTD-2165H16.1	SMAD2	14652503	45379761	ENSG00000250182|	ENSG00000175387|	breast_cancer	SRR064287,SRR064439,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000262160,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000262160, 	-1:ENST00000262160, 	LKPPFV*:UnSpec-ENST00000262160, 	-1:UnSpec, 	Intron:ENST00000262160, 	Intergenic:UnSpec, 	CDS:ENST00000262160, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000262160, 	DOMAIN_UNK:ENST00000262160, 
0.0002	4936	SRR064439	defuse	5	8	1	8	566454	567996	70602344	70602417	+	-	RP5-857K21.6	AC091047.1	567093	70602356	ENSG00000237973|	ENSG00000252197|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4937	SRR064439	defuse	6	13	MT	MT	14149	14673	9207	9990	-	+	MT-ND6	MT-CO3	14450	9248	ENSG00000198695|	ENSG00000198938|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0004	4938	SRR064439	defuse	9	7	2	1	232571605	232578251	536816	659930	+	-	PTMA	RP5-857K21.4	232576642	568963	ENSG00000187514|	ENSG00000230021|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000341369,	UnSpec,	FrameShift 	1:ENST00000341369, 	210:ENST00000341369, 	-1:UnSpec, 	-1:UnSpec, 	MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAVSVCFAPEPWQLPPHKIFPVLL*:ENST00000341369-UnSpec, 	3:ENST00000341369, 	-1:UnSpec, 	CDS:ENST00000341369, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000341369, 	DOMAIN_UNK:ENST00000341369, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4939	SRR064439	defuse	24	17	MT	MT	14149	14673	8366	8572	-	+	MT-ND6	J01415.25	14367	8435	ENSG00000198695|	ENSG00000228253|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4940	SRR064439	defuse	12	71	MT	MT	577	647	8527	9207	+	+	J01415.2	MT-ATP6	340	8730	ENSG00000210049|	ENSG00000198899|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0001	4941	SRR064439	defuse	281	493	17	11	33474836	33516364	83166055	85338966	+	-	UNC45B	DLG2	33478115	85194786	ENSG00000141161|	ENSG00000150672|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570,	ENST00000376104,	FrameShift 	1:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	418:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	-1:ENST00000376104, 	-1:ENST00000376104, 	MAEVEAVQLKEEGNRHFQLQDYKAATNSYSQALKLTKDKALLATLYRNRAACGLKTESYVQAASDASRAIDINSSDIKALYRRCQALEHLGKLDQAFKDVQRCATLEPRNQNFQEMLRRLNTSIQEKVSWASSHNPWLPSPSLHS*:ENST00000268876-ENST00000376104,ENST00000433649-ENST00000376104,ENST00000378449-ENST00000376104,ENST00000394570-ENST00000376104, 	Intron:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	Intron:ENST00000376104, 	CDS:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	CDS:ENST00000376104, 	NO_DOMAIN:ENST00000378449,ENST00000433649, Repeat=TPR 1,Repeat=TPR 2,Repeat=TPR 3,Repeat=ARM 1,Repeat=ARM 2,:ENST00000268876,ENST00000394570, 	NO_DOMAIN:ENST00000378449,ENST00000433649, Repeat=ARM 3,:ENST00000268876,ENST00000394570, 	NO_DOMAIN:ENST00000376104, 	Domain=PDZ 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=PDZ 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=PDZ 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=SH3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00192,Domain=Guanylate kinase-like;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00100,:ENST00000376104, 
0.0002	4942	SRR064439	defuse	8	7	1	5	565020	566063	177482605	177483195	+	+	RP5-857K21.8	RP11-889L3.1	565346	177482860	ENSG00000225630|	ENSG00000218227|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4943	SRR064439	defuse	7	5	7	1	5566782	5603415	565020	566063	-	+	ACTB	RP5-857K21.8	5569028	565877	ENSG00000075624|	ENSG00000225630|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000331789,	UnSpec,	UnSpec 	1:ENST00000331789, 	42:ENST00000331789, 	-1:UnSpec, 	-1:UnSpec, 	MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG:ENST00000331789-UnSpec, 	3:ENST00000331789, 	-1:UnSpec, 	CDS:ENST00000331789, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000331789, 	DOMAIN_UNK:ENST00000331789, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4944	SRR064439	defuse	5	4	17	1	37004118	37010064	536816	659930	-	-	RPL23	RP5-857K21.4	37009356	568976	ENSG00000125691|	ENSG00000230021|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000394332,	UnSpec,	UnSpec 	1:ENST00000394332, 	5:ENST00000394332, 	-1:UnSpec, 	-1:UnSpec, 	MSKRG:ENST00000394332-UnSpec, 	2:ENST00000394332, 	-1:UnSpec, 	CDS:ENST00000394332, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000394332, 	DOMAIN_UNK:ENST00000394332, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4945	SRR064439	defuse	6	5	MT	MT	12337	14148	8527	9207	+	+	MT-ND5	MT-ATP6	13933	8922	ENSG00000198786|	ENSG00000198899|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4946	SRR064439	defuse	5	8	MT	MT	4470	5511	10760	12137	+	+	MT-ND2	MT-ND4	5332	10954	ENSG00000198763|	ENSG00000198886|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.3124	4947	SRR064439	defuse	9	3	9	9	139334549	139372141	139377947	139380518	-	+	SEC16A	C9orf163	139372139	139378921	ENSG00000148396|	ENSG00000196366|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000290037,	ENST00000354376,	FrameShift 	-1:ENST00000290037, 	-1:ENST00000290037, 	-1:ENST00000354376, 	-1:ENST00000354376, 	MASREAELPAAAEVLPGWEPPLSPAGPAAGEGGGDIRATPAGPQAVQGELQSG*:ENST00000290037-ENST00000354376, 	1:ENST00000290037, 	1:ENST00000354376, 	5UTR:ENST00000290037, 	CDS:ENST00000354376, 	DOMAIN_UNK:ENST00000290037, 	DOMAIN_UNK:ENST00000290037, 	NO_DOMAIN:ENST00000354376, 	NO_DOMAIN:ENST00000354376, 
0.0002	4948	SRR064439	defuse	16	9	9	1	79186649	79186950	91726323	91870426	+	-	AL161626.1	HFM1	79186683	91852784	ENSG00000241781|	ENSG00000162669|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000370421,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000370421, 	-1:ENST00000370421, 	GGSIS*:UnSpec-ENST00000370421, 	-1:UnSpec, 	Intron:ENST00000370421, 	Intergenic:UnSpec, 	CDS:ENST00000370421, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:ENST00000370421, 
0.0003	4949	SRR064439	defuse	11	4	5	5	134240596	134343649	177482605	177483195	+	+	PCBD2	RP11-889L3.1	134262985	177482904	ENSG00000132570|	ENSG00000218227|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000254908,	UnSpec,	FrameShift 	1:ENST00000254908, 	5681:ENST00000254908, 	-1:UnSpec, 	-1:UnSpec, 	MAAVLGALGATRRLLAALRGQSLGLAAMSSGTHRLTAEERNQAILDLKAAGWSELSERDAIYKEFSFHNFNQVIVINSC*:ENST00000254908-UnSpec, 	Intron:ENST00000254908, 	-1:UnSpec, 	CDS:ENST00000254908, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000254908, 	DOMAIN_UNK:ENST00000254908, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4950	SRR064439	defuse	7	13	MT	MT	14149	14673	7586	8269	-	+	MT-ND6	MT-CO2	14612	7790	ENSG00000198695|	ENSG00000198712|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4951	SRR064439	defuse	21	91	1	19	231297858	231357302	24184075	24184165	+	-	TRIM67	AC092279.1	231299322	24184150	ENSG00000119283|	ENSG00000251948|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000449018,	UnSpec,	UnSpec 	1:ENST00000449018, 	202:ENST00000449018, 	-1:UnSpec, 	-1:UnSpec, 	MEEELKCPVCGSLFREPIILPCSHNVCLPCARTIAVQTPDGEQHLPQPLLLSRGSGLQAGAAAAASLEHDAAAGPACGGAGGSAAGGLGGGAGGGGDHADKLSLYSETDSGYGSYTPSLKSPNGVRVLPMVPAPPGSSAAAARGAACSSLSSSSSSITCPQCHRSASLDHRGLRGFQRNRLLEAIVQRYQQGRGAVPGTSAA:ENST00000449018-UnSpec, 	2:ENST00000449018, 	-1:UnSpec, 	CDS:ENST00000449018, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000449018, 	DOMAIN_UNK:ENST00000449018, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0001	4952	SRR064439	defuse	6	2	19	18	12907634	12912694	45357922	45457515	-	-	PRDX2	SMAD2	12907937	45379693	ENSG00000167815|	ENSG00000175387|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000301522,	ENST00000402690,ENST00000356825,ENST00000262160,	FrameShift 	1:ENST00000301522, 	185:ENST00000301522, 	-1:ENST00000402690,ENST00000356825,ENST00000262160, 	-1:ENST00000402690,ENST00000356825,ENST00000262160, 	MASGNARIGKPAPDFKATAVVDGAFKEVKLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQYTDEHGEVCPAGWKPGSDTIKPGLKTDAIPGRLNQTTFTATRPGVYYGHSSALAFRVAGITGVCHHARLSFVFSVEMGFHYVGQAGL*:ENST00000301522-ENST00000402690,ENST00000301522-ENST00000262160,ENST00000301522-ENST00000356825, 	6:ENST00000301522, 	Intron:ENST00000402690,ENST00000356825,ENST00000262160, 	CDS:ENST00000301522, 	CDS:ENST00000402690,ENST00000356825,ENST00000262160, 	Domain=Thioredoxin;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00691,:ENST00000301522, 	NO_DOMAIN:ENST00000301522, 	NO_DOMAIN:ENST00000402690,ENST00000356825,ENST00000262160, 	Domain=MH1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00438,Domain=MH2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00439,:ENST00000402690,ENST00000356825,ENST00000262160, 
0.0003	4953	SRR064439	defuse	10	7	17	17	37617739	37690800	37702357	37702497	+	-	CDK12	U6.891	37687273	37700501	ENSG00000167258|	ENSG00000222777|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	5p_KINASE																
0.0002	4954	SRR064439	defuse	6	5	MT	MT	14149	14673	10760	12137	-	+	MT-ND6	MT-ND4	14398	11498	ENSG00000198695|	ENSG00000198886|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4955	SRR064439	defuse	15	3	1	3	565020	566063	75263782	75264787	+	+	RP5-857K21.8	RP11-642N14.1	565874	75264437	ENSG00000225630|	ENSG00000213300|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4956	SRR064439	defuse	17	65	MT	MT	577	647	8527	9207	+	+	J01415.2	MT-ATP6	342	8609	ENSG00000210049|	ENSG00000198899|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0001	4957	SRR064439	defuse	8	22	11	11	73685712	73694352	65265233	65273940	-	+	UCP2	MALAT1	73685954	65268063	ENSG00000175567|	ENSG00000251562|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000310473,	UnSpec,	UnSpec 	0:ENST00000310473, 	0:ENST00000310473, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000310473-UnSpec, 	Intron:ENST00000310473, 	Intron:UnSpec, 	3UTR:ENST00000310473, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000310473, 	DOMAIN_UNK:ENST00000310473, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0003	4958	SRR064439	defuse	5	71	8	19	22446787	22459597	24184075	24184165	+	-	AC037459.4	AC092279.1	22457401	24184150	ENSG00000248235|	ENSG00000251948|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000430850,	UnSpec,	FrameShift 	1:ENST00000430850, 	2139:ENST00000430850, 	-1:UnSpec, 	-1:UnSpec, 	MDSEGGSLLLDEDSEVFKMLQENREGRAAPRQSSSFRLLQEALEAEERGGTPAFLPSSLSPQSSLPASRALATPPKLHTCEKCSTSIANQAVRIQEGRYRHPGCYTCADCGLNLKMRGHFWVGDELYCEKHARQRYSAPATLSSRA*:ENST00000430850-UnSpec, 	Intron:ENST00000430850, 	-1:UnSpec, 	CDS:ENST00000430850, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000430850, 	DOMAIN_UNK:ENST00000430850, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4959	SRR064439	defuse	5	1	17	12	48939584	48945339	123319000	123347507	-	+	TOB1	HIP1R	48940740	123348420	ENSG00000141232|	ENSG00000130787|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000268957,	UnSpec,	UnSpec 	1:ENST00000268957, 	213:ENST00000268957, 	-1:UnSpec, 	-1:UnSpec, 	MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERLLKKKYEGHWYPEKPYKGSGFRCIHIGEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNNENGCELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTFTTATFAATKFGSTKMKNSGRSNKVARTSPINLGLNV:ENST00000268957-UnSpec, 	3:ENST00000268957, 	-1:UnSpec, 	CDS:ENST00000268957, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000268957, 	DOMAIN_UNK:ENST00000268957, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4960	SRR064439	defuse	6	6	MT	MT	14149	14673	8366	8572	-	+	MT-ND6	J01415.25	14668	8460	ENSG00000198695|	ENSG00000228253|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4961	SRR064439	defuse	5	1	19	19	47278140	47291851	47249303	47261832	-	+	SLC1A5	FKRP	47280267	47263674	ENSG00000105281|	ENSG00000181027|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000306894,	UnSpec,	UnSpec 	1:ENST00000306894, 	451:ENST00000306894, 	-1:UnSpec, 	-1:UnSpec, 	MVADPPRDSKGLAAAEPTANGGLALASIEDQGAAAGGYCGSRDQVRRCLRANLLVLLTVVAVVAGVALGLGVSGAGGALALGPERLSAFVFPGELLLRLLRMIILPLVVCSLIGGAASLDPGALGRLGAWALLFFLVTTLLASALGVGLALALQPGAASAAINASVGAAGSAENAPSKEVLDSFLDLARNIFPSNLVSAAFRSYSTTYEERNITGTRVKVPVGQEVEGMNILGLVVFAIVFGVALRKLGPEGELLIRFFNSFNEATMVLVSWIMWYAPVGIMFLVAGKIVEMEDVGLLFARLGKYILCCLLGHAIHGLLVLPLIYFLFTRKNPYRFLWGIVTPLATAFGTSSSSATLPLMMKCVEENNGVAKHISRFILPIGATVNMDGAALFQCVAAVFIAQLSQQSLDFVKIITILVTATASSVGAAGIPAGGVLTLAIILEAVNLPVD:ENST00000306894-UnSpec, 	7:ENST00000306894, 	-1:UnSpec, 	CDS:ENST00000306894, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000306894, 	DOMAIN_UNK:ENST00000306894, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0004	4962	SRR064439	defuse	40	51	17	17	38218446	38250120	46371707	46385191	+	+	THRA	AC090627.1	38243104	46371707	ENSG00000126351|	ENSG00000235300|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000264637,	UnSpec,	FrameShift 	1:ENST00000264637, 	870:ENST00000264637, 	-1:UnSpec, 	-1:UnSpec, 	MEQKPSKVECGSDPEENSARSPDGKRKRKNGQCSLKTSMSGYIPSYLDKDEQCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVIDKITRNQCQLCRFKKCIAVGMAMDLVLDDSKRVAKRKLIEQNRERRRKEEMIRSLQQRPEPTPEEWDLIHIATEAHRSTNAQGSHWKQRRKFLVRRKGAWGEQ*:ENST00000264637-UnSpec, 	7:ENST00000264637, 	-1:UnSpec, 	CDS:ENST00000264637, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000264637, 	DOMAIN_UNK:ENST00000264637, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4963	SRR064439	defuse	5	8	13	5	82264203	82264535	134240596	134343649	+	+	PTMAP5	PCBD2	82264359	134263192	ENSG00000214182|	ENSG00000132570|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4964	SRR064439	defuse	5	36	MT	MT	14149	14673	7586	8269	-	+	MT-ND6	MT-CO2	14364	7718	ENSG00000198695|	ENSG00000198712|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4965	SRR064439	defuse	6	1	11	2	65265233	65273940	88055474	88285309	+	-	MALAT1	RGPD2	65268044	88124557	ENSG00000251562|	ENSG00000185304|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000398146,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000398146, 	-1:ENST00000398146, 	NLYLIFLAE*:UnSpec-ENST00000398146, 	-1:UnSpec, 	Intron:ENST00000398146, 	Intergenic:UnSpec, 	CDS:ENST00000398146, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000398146, 	DOMAIN_UNK:ENST00000398146, 
0.0002	4966	SRR064439	defuse	6	24	10	14	97071528	97321171	90863327	90874617	-	+	SORBS1	CALM1	97074767	90871915	ENSG00000095637|	ENSG00000198668|	breast_cancer	SRR064439,	breast_cancer,	3p_KINASE																
0.0002	4967	SRR064439	defuse	5	25	1	6	536816	659930	39926153	39926572	-	-	RP5-857K21.4	RP1-278E11.3	568204	39926440	ENSG00000230021|	ENSG00000180211|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4968	SRR064439	defuse	34	131	22	17	21271714	21308037	33474836	33516364	+	+	CRKL	UNC45B	21265746	33478341	ENSG00000099942|	ENSG00000141161|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000268876,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000268876, 	-1:ENST00000268876, 	HFPRPTAGRGF*:UnSpec-ENST00000268876, 	-1:UnSpec, 	Intron:ENST00000268876, 	Intergenic:UnSpec, 	CDS:ENST00000268876, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000268876, 	DOMAIN_UNK:ENST00000268876, 
0.0002	4969	SRR064439	defuse	9	13	1	19	536816	659930	11750591	11797382	-	+	RP5-857K21.4	ZNF833P	569025	11777268	ENSG00000230021|	ENSG00000197332|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0003	4970	SRR064439	defuse	354	227	1	X	91726323	91870426	108297361	108297792	-	-	HFM1	RN28S1	91852963	108297812	ENSG00000162669|	ENSG00000226958|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000370421,	UnSpec,	FrameShift 	1:ENST00000370421, 	2393:ENST00000370421, 	-1:UnSpec, 	-1:UnSpec, 	MLKSNDCLFSLENLFFEKPDEVENHPDNEKSLDWFLPPAPLISEIPDTQELEEELESHKLLGQEKRPKMLTSNLKITNEDTNYISLTQKFQFAFPSDKYEQDDLNLEGVGNNDLSHIAGKLTYASQKYKNHIGTEIAPEKSVPDDTKLVNFAEDKGESTSVFRKR*:ENST00000370421-UnSpec, 	Intron:ENST00000370421, 	-1:UnSpec, 	CDS:ENST00000370421, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4971	SRR064439	defuse	6	12	MT	MT	8527	9207	14747	15887	+	+	MT-ATP6	MT-CYB	8677	15201	ENSG00000198899|	ENSG00000198727|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4972	SRR064439	defuse	5	40	1	1	536816	659930	91726323	91870426	-	-	RP5-857K21.4	HFM1	570091	91853147	ENSG00000230021|	ENSG00000162669|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000370421,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000370421, 	-1:ENST00000370421, 	PGTVPGGEFDWGCTPVKR*:UnSpec-ENST00000370421, 	-1:UnSpec, 	Intron:ENST00000370421, 	Intergenic:UnSpec, 	CDS:ENST00000370421, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:ENST00000370421, 
0.0002	4973	SRR064439	defuse	29	79	19	2	24184075	24184165	33050510	33151760	-	+	AC092279.1	AL121656.4	24184150	33141318	ENSG00000251948|	ENSG00000230876|	breast_cancer	SRR064439,SRR064441,	breast_cancer,	NO_KINASE																
0.0002	4974	SRR064439	defuse	9	1	12	8	124069078	124083116	145539954	145550573	+	-	TMED2	DGAT1	124069214	145560681	ENSG00000086598|	ENSG00000185000|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4975	SRR064439	defuse	14	3	12	12	123773656	123834988	123849500	123850660	-	+	SBNO1	RP13-942N8.1	123834988	123849248	ENSG00000139697|	ENSG00000256092|	breast_cancer	SRR064287,SRR064438,SRR064439,SRR064441,	breast_cancer,	NO_KINASE	ENST00000267176,	UnSpec,	UnSpec 	1:ENST00000267176, 	0:ENST00000267176, 	-1:UnSpec, 	-1:UnSpec, 	:ENST00000267176-UnSpec, 	1:ENST00000267176, 	-1:UnSpec, 	CDS:ENST00000267176, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000267176, 	DOMAIN_UNK:ENST00000267176, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0004	4976	SRR064439	defuse	6	7	17	1	37356536	37360980	536816	659930	+	-	RPL19	RP5-857K21.4	37359262	568956	ENSG00000108298|	ENSG00000230021|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000225430,	UnSpec,	FrameShift 	1:ENST00000225430, 	268:ENST00000225430, 	-1:UnSpec, 	-1:UnSpec, 	MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKCGHLLLKK*:ENST00000225430-UnSpec, 	4:ENST00000225430, 	-1:UnSpec, 	CDS:ENST00000225430, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000225430, 	DOMAIN_UNK:ENST00000225430, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4977	SRR064439	defuse	5	2	19	19	58816715	58827023	58838385	58853712	+	+	AC020915.4	ZSCAN22	58826400	58838187	ENSG00000142396|	ENSG00000182318|	breast_cancer	SRR064437,SRR064439,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	4978	SRR064439	defuse	8	21	2	1	232318242	232348352	536816	659930	-	-	NCL	RP5-857K21.4	232325243	568205	ENSG00000115053|	ENSG00000230021|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000322723,	UnSpec,	UnSpec 	1:ENST00000322723, 	281:ENST00000322723, 	-1:UnSpec, 	-1:UnSpec, 	MVKLAKAGKNQGDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGKKAAATSAKKVVVSPTKKVAVATPAKKAAVTPGKKAAATPAKKTVTPAKAVTTPGKKGATPGKALVATPGKKGAAIPAKGAKNGKNAKKEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRK:ENST00000322723-UnSpec, 	5:ENST00000322723, 	-1:UnSpec, 	CDS:ENST00000322723, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000322723, 	DOMAIN_UNK:ENST00000322723, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0001	4979	SRR064439	defuse	24	14	17	1	16284113	16286054	566454	567996	+	+	UBB	RP5-857K21.6	16284462	566887	ENSG00000170315|	ENSG00000237973|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000302182,	UnSpec,	UnSpec 	0:ENST00000302182, 	0:ENST00000302182, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000302182-UnSpec, 	Intron:ENST00000302182, 	Intron:UnSpec, 	5UTR:ENST00000302182, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000302182, 	DOMAIN_UNK:ENST00000302182, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4980	SRR064439	defuse	8	9	1	3	566454	567996	101292939	101313281	+	+	RP5-857K21.6	PCNP	567095	101295653	ENSG00000237973|	ENSG00000081154|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000265260,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000265260, 	-1:ENST00000265260, 	SSTPHEHIFGPHP*:UnSpec-ENST00000265260, 	-1:UnSpec, 	Intron:ENST00000265260, 	Intergenic:UnSpec, 	CDS:ENST00000265260, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000265260, 	DOMAIN_UNK:ENST00000265260, 
0.0004	4981	SRR064439	defuse	7	9	12	1	6643093	6647537	536816	659930	+	-	GAPDH	RP5-857K21.4	6646493	569175	ENSG00000111640|	ENSG00000230021|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000229239,	UnSpec,	FrameShift 	1:ENST00000229239, 	184:ENST00000229239, 	-1:UnSpec, 	-1:UnSpec, 	MGKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIIR*:ENST00000229239-UnSpec, 	7:ENST00000229239, 	-1:UnSpec, 	CDS:ENST00000229239, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000229239, 	DOMAIN_UNK:ENST00000229239, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4982	SRR064439	defuse	15	196	19	1	24184075	24184165	108113461	108113552	-	-	AC092279.1	AC114491.2	24184140	108113527	ENSG00000251948|	ENSG00000252194|	breast_cancer	SRR064439,SRR064441,	breast_cancer,	NO_KINASE																
0.0002	4983	SRR064439	defuse	7	11	MT	MT	14149	14673	5904	7445	-	+	MT-ND6	MT-CO1	14548	6510	ENSG00000198695|	ENSG00000198804|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4984	SRR064439	defuse	5	52	13	2	23270162	23270713	133038647	133038738	-	-	FTH1P7	AC097532.1	23270863	133038723	ENSG00000232187|	ENSG00000252318|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4985	SRR064439	defuse	7	4	8	1	146015150	146017972	536816	659930	-	-	RPL8	RP5-857K21.4	146015836	569333	ENSG00000161016|	ENSG00000230021|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000262584,	UnSpec,	UnSpec 	1:ENST00000262584, 	173:ENST00000262584, 	-1:UnSpec, 	-1:UnSpec, 	MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGG:ENST00000262584-UnSpec, 	5:ENST00000262584, 	-1:UnSpec, 	CDS:ENST00000262584, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000262584, 	DOMAIN_UNK:ENST00000262584, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4986	SRR064439	defuse	32	1062	2	5	132905164	133015542	174346085	174422516	-	-	ANKRD30BL	CTC-281M20.1	133012146	174541794	ENSG00000163046|	ENSG00000204754|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4987	SRR064439	defuse	5	10	MT	MT	14149	14673	3307	4262	-	+	MT-ND6	MT-ND1	14354	4150	ENSG00000198695|	ENSG00000198888|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4988	SRR064439	defuse	8	17	1	5	536816	659930	177482605	177483195	-	+	RP5-857K21.4	RP11-889L3.1	568325	177482879	ENSG00000230021|	ENSG00000218227|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	4989	SRR064439	defuse	5	2	20	17	52553316	52687304	47209822	47247351	-	+	BCAS1	B4GALNT2	52674625	47199825	ENSG00000064787|	ENSG00000167080|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000371435,	UnSpec,	UnSpec 	1:ENST00000371435, 	47:ENST00000371435, 	-1:UnSpec, 	-1:UnSpec, 	MGNQMSVPQRVEDQENEPEAETYQDNASALNGVPVVVSTHTVQHLEE:ENST00000371435-UnSpec, 	3:ENST00000371435, 	-1:UnSpec, 	CDS:ENST00000371435, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000371435, 	DOMAIN_UNK:ENST00000371435, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0004	4990	SRR064439	defuse	21	4	2	1	232571605	232578251	565020	566063	+	+	PTMA	RP5-857K21.8	232577183	565844	ENSG00000187514|	ENSG00000225630|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000341369,	UnSpec,	FrameShift 	1:ENST00000341369, 	234:ENST00000341369, 	-1:UnSpec, 	-1:UnSpec, 	MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGE*:ENST00000341369-UnSpec, 	4:ENST00000341369, 	-1:UnSpec, 	CDS:ENST00000341369, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000341369, 	DOMAIN_UNK:ENST00000341369, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4991	SRR064439	defuse	10	12	1	19	536816	659930	24184075	24184165	-	-	RP5-857K21.4	AC092279.1	569011	24184130	ENSG00000230021|	ENSG00000251948|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0001	4992	SRR064439	defuse	9	33	3	2	126061478	126076285	33050510	33151760	-	+	KLF15	AL121656.4	126062227	33141356	ENSG00000163884|	ENSG00000230876|	breast_cancer	SRR064286,SRR064439,SRR064441,	breast_cancer,	NO_KINASE	ENST00000296233,	UnSpec,	UnSpec 	0:ENST00000296233, 	0:ENST00000296233, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000296233-UnSpec, 	Intron:ENST00000296233, 	Intron:UnSpec, 	3UTR:ENST00000296233, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000296233, 	DOMAIN_UNK:ENST00000296233, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0001	4993	SRR064439	defuse	5	1	17	14	28804426	28853837	37667155	38021566	+	+	GOSR1	MIPOL1	28849916	38035982	ENSG00000108587|	ENSG00000151338|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000225724,	UnSpec,	UnSpec 	0:ENST00000225724, 	0:ENST00000225724, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000225724-UnSpec, 	Intron:ENST00000225724, 	Intron:UnSpec, 	3UTR:ENST00000225724, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000225724, 	DOMAIN_UNK:ENST00000225724, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4994	SRR064439	defuse	5	13	18	1	43664110	43684300	566454	567996	-	+	ATP5A1	RP5-857K21.6	43669932	566886	ENSG00000152234|	ENSG00000237973|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000282050,	UnSpec,	UnSpec 	1:ENST00000282050, 	113:ENST00000282050, 	-1:UnSpec, 	-1:UnSpec, 	MLSVRVAAAVVRALPRRAGLVSRNALGSSFIAARNFHASNTHLQKTGTAEMSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDN:ENST00000282050-UnSpec, 	5:ENST00000282050, 	-1:UnSpec, 	CDS:ENST00000282050, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000282050, 	DOMAIN_UNK:ENST00000282050, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4995	SRR064439	defuse	8	9	1	4	536816	659930	106405855	106407237	-	+	RP5-857K21.4	AC004066.1	569175	106406617	ENSG00000230021|	ENSG00000249264|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0051	4996	SRR064439	defuse	15	2	19	7	571310	583492	105730949	105753022	+	-	BSG	SYPL1	583365	105741813	ENSG00000172270|	ENSG00000008282|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000333511,	ENST00000011473,	InFrame 	1:ENST00000333511, 	385:ENST00000333511, 	-1:ENST00000011473, 	-1:ENST00000011473, 	MAAALFVLLGFALLGTHGASGAAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDTCSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRVKWVRAQAVVLVLEPGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVRSHLAALWPFLGIVAEVLVLVTIIFIYEKRRKPEDVLDDDDAGSAPLKSSGQHQNDKGKNVRQRNSS:ENST00000333511-ENST00000011473, 	Intron:ENST00000333511, 	Intron:ENST00000011473, 	3UTR:ENST00000333511, 	CDS:ENST00000011473, 	Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=Ig-like C2-type,Domain=Ig-like V-type,:ENST00000333511, 	NO_DOMAIN:ENST00000333511, 	DOMAIN_UNK:ENST00000011473, 	DOMAIN_UNK:ENST00000011473, 
0.9964	4997	SRR064439	defuse	27	26	17	17	57970447	58027925	47006678	47022479	+	-	RPS6KB1	SNF8	57970686	47021337	ENSG00000108443|	ENSG00000159210|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	5p_KINASE	ENST00000406116,ENST00000225577,ENST00000425292,ENST00000393021,	ENST00000502492,ENST00000290330,	InFrame 	1:ENST00000406116,ENST00000225577,ENST00000425292,ENST00000393021, 	47:ENST00000406116,ENST00000225577,ENST00000425292,ENST00000393021, 	18:ENST00000502492,ENST00000290330, 	257:ENST00000290330, 258:ENST00000502492, 	MRRRRRRDGFYPAPDFRDREAEDMAGVFDIDLDQPEDAGSEDELEEGAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTVVLQLAENGYVTVSEIKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLPALFTDLYSQEITAEEAREALP:ENST00000225577-ENST00000290330, MRRRRRRDGFYPAPDFRDREAEDMAGVFDIDLDQPEDAGSEDELEEGAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTVVLQLAEKNGYVTVSEIKASLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLPALFTDLYSQEITAEEAREALP:ENST00000406116-ENST00000502492,ENST00000425292-ENST00000502492,ENST00000393021-ENST00000502492,ENST00000225577-ENST00000502492, 	1:ENST00000406116,ENST00000225577,ENST00000425292,ENST00000393021, 	2:ENST00000502492,ENST00000290330, 	CDS:ENST00000406116,ENST00000225577,ENST00000425292,ENST00000393021, 	CDS:ENST00000502492,ENST00000290330, 	NO_DOMAIN:ENST00000406116,ENST00000225577,ENST00000425292,ENST00000393021, 	Domain=Protein kinase;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00159,Domain=AGC-kinase C-terminal,Region=Autoinhibitory domain,:ENST00000406116,ENST00000225577,ENST00000393021, NO_DOMAIN:ENST00000425292, 	NO_DOMAIN:ENST00000502492,ENST00000290330, 	NO_DOMAIN:ENST00000502492,ENST00000290330, 
0.0004	4998	SRR064439	defuse	5	15	19	1	13049414	13055304	536816	659930	+	-	CALR	RP5-857K21.4	13054638	568326	ENSG00000179218|	ENSG00000230021|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000316448,	UnSpec,	FrameShift 	1:ENST00000316448, 	416:ENST00000316448, 	-1:UnSpec, 	-1:UnSpec, 	MLLSVPLLLGLLGLAVAEPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDASKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKVRPGPGPDVGGGQGWQGARP*:ENST00000316448-UnSpec, 	9:ENST00000316448, 	-1:UnSpec, 	CDS:ENST00000316448, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000316448, 	DOMAIN_UNK:ENST00000316448, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	4999	SRR064439	defuse	8	1	19	19	28284402	28297684	28281402	28284848	+	-	AC006504.1	AC006504.2	28237247	28283906	ENSG00000233391|	ENSG00000247687|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5000	SRR064439	defuse	5	1	19	4	36630918	36641254	40812044	41218731	+	-	CAPNS1	APBB2	36632081	41218443	ENSG00000126247|	ENSG00000163697|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0004	5001	SRR064439	defuse	6	23	2	1	232571605	232578251	536816	659930	+	-	PTMA	RP5-857K21.4	232576080	569116	ENSG00000187514|	ENSG00000230021|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000341369,	UnSpec,	FrameShift 	1:ENST00000341369, 	888:ENST00000341369, 	-1:UnSpec, 	-1:UnSpec, 	MSDAAVDTSSEITTKVRLDAARPLGVRAPPLGRCLARSSWTVSSPLLLPLAGKRPAPGAVPSGSPLFVWCGGGGGNRRGQT*:ENST00000341369-UnSpec, 	2:ENST00000341369, 	-1:UnSpec, 	CDS:ENST00000341369, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000341369, 	DOMAIN_UNK:ENST00000341369, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5002	SRR064439	defuse	5	11	MT	MT	3307	4262	10760	12137	+	+	MT-ND1	MT-ND4	4081	11002	ENSG00000198888|	ENSG00000198886|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5003	SRR064439	defuse	8	13	2	1	33050510	33151760	108113461	108113552	+	-	AL121656.4	AC114491.2	33141359	108113634	ENSG00000230876|	ENSG00000252194|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0004	5004	SRR064439	defuse	6	14	16	1	30064444	30081741	566454	567996	+	+	ALDOA	RP5-857K21.6	30078952	567564	ENSG00000149925|	ENSG00000237973|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000338110,	UnSpec,	FrameShift 	1:ENST00000338110, 	125:ENST00000338110, 	-1:UnSpec, 	-1:UnSpec, 	MPYQYPALTPEQKKELSDIAHRIVAPGKGILAADESTGAGRRQNGWRVQGWEWQADPLIPM*:ENST00000338110-UnSpec, 	8:ENST00000338110, 	-1:UnSpec, 	CDS:ENST00000338110, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000338110, 	DOMAIN_UNK:ENST00000338110, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5005	SRR064439	defuse	6	16	1	6	536816	659930	39926153	39926572	-	-	RP5-857K21.4	RP1-278E11.3	569027	39926448	ENSG00000230021|	ENSG00000180211|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5006	SRR064439	defuse	5	19	MT	MT	12337	14148	7586	8269	+	+	MT-ND5	MT-CO2	14090	7652	ENSG00000198786|	ENSG00000198712|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5007	SRR064439	defuse	6	3	17	3	37026256	37078023	128444965	128533639	+	+	LASP1	RAB7A	37076080	128532423	ENSG00000002834|	ENSG00000075785|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5008	SRR064439	defuse	10	207	19	5	24184075	24184165	71146740	71146942	-	+	AC092279.1	AC116340.1	24184152	71146745	ENSG00000251948|	ENSG00000239935|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5009	SRR064439	defuse	6	8	MT	MT	14149	14673	3307	4262	-	+	MT-ND6	MT-ND1	14450	3484	ENSG00000198695|	ENSG00000198888|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5010	SRR064439	defuse	7	5	MT	MT	10760	12137	14149	14673	+	-	MT-ND4	MT-ND6	10853	14365	ENSG00000198886|	ENSG00000198695|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5011	SRR064439	defuse	5	1	12	17	124069078	124083116	27717943	27871502	+	+	TMED2	TAOK1	124069214	27717609	ENSG00000086598|	ENSG00000160551|	breast_cancer	SRR064439,	breast_cancer,	3p_KINASE																
0.0002	5012	SRR064439	defuse	5	17	MT	MT	12337	14148	5904	7445	+	+	MT-ND5	MT-CO1	14131	6332	ENSG00000198786|	ENSG00000198804|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5013	SRR064439	defuse	5	7	17	5	37356536	37360980	134240596	134343649	+	+	RPL19	PCBD2	37359262	134262812	ENSG00000108298|	ENSG00000132570|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000225430,	ENST00000398833,ENST00000512783,ENST00000254908,	FrameShift 	1:ENST00000225430, 	268:ENST00000225430, 	-1:ENST00000398833,ENST00000512783,ENST00000254908, 	-1:ENST00000398833,ENST00000512783,ENST00000254908, 	MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKCGHLLLKK*:ENST00000225430-ENST00000254908,ENST00000225430-ENST00000398833,ENST00000225430-ENST00000512783, 	4:ENST00000225430, 	Intron:ENST00000398833,ENST00000512783,ENST00000254908, 	CDS:ENST00000225430, 	CDS:ENST00000398833,ENST00000512783,ENST00000254908, 	NO_DOMAIN:ENST00000225430, 	NO_DOMAIN:ENST00000225430, 	NO_DOMAIN:ENST00000398833,ENST00000512783,ENST00000254908, 	NO_DOMAIN:ENST00000398833,ENST00000512783,ENST00000254908, 
0.0002	5014	SRR064439	defuse	6	10	MT	MT	4470	5511	14149	14673	+	-	MT-ND2	MT-ND6	5277	14617	ENSG00000198763|	ENSG00000198695|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0004	5015	SRR064439	defuse	11	7	17	1	34136488	34174237	565020	566063	+	+	TAF15	RP5-857K21.8	34171660	565872	ENSG00000172660|	ENSG00000225630|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000311979,	UnSpec,	FrameShift 	1:ENST00000311979, 	488:ENST00000311979, 	-1:UnSpec, 	-1:UnSpec, 	MSDSGSYGQSGGEQQSYSTYGNPGSQGYGQASQSYSGYGQTTDSSYGQNYSGYSSYGQSQSGYSQSYGGYENQKQSSYSQQPYNNQGQQQNMESSGSQGGRAPSYDQPDYGQQDSYDQQSGYDQHQGSYDEQSNYDQQHDSYSQNQQSYHSQRENYSHHTQDDRRDVSRYGEDNRGYGGSQGGGRGRGGYDKDGRGPMTGSSGGDRGGFKNFGGHRDYGPRTDADSESDNSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKTNKKTGKPMINLYTDKDTGKPKGEATVSFDDPPSAKAAIDWFDGKEFHGNIIKVSFATRRPEFMRGGGSGGGRRGRGGYRGRGGFQGRGGDPKSGDWVCPNPSCGNMNFARRNSCNQCNEPRPEDSRPSGGGGSAF*:ENST00000311979-UnSpec, 	15:ENST00000311979, 	-1:UnSpec, 	CDS:ENST00000311979, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000311979, 	DOMAIN_UNK:ENST00000311979, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5016	SRR064439	defuse	6	6	MT	MT	12337	14148	4470	5511	+	+	MT-ND5	MT-ND2	13803	5282	ENSG00000198786|	ENSG00000198763|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5017	SRR064439	defuse	21	12	8	14	96083960	96100152	50300810	50311552	-	-	RP11-320N21.2	AL627171.1	96097844	50329322	ENSG00000254248|	ENSG00000197502|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5018	SRR064439	defuse	6	33	20	2	48807376	48809212	133038647	133038738	+	-	CEBPB	AC097532.1	48807862	133038722	ENSG00000172216|	ENSG00000252318|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0004	5019	SRR064439	defuse	5	18	1	5	67278568	67390570	118173017	118324240	-	-	WDR78	DTWD2	67310906	118309845	ENSG00000152763|	ENSG00000169570|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000371023,ENST00000371026,	ENST00000506980,ENST00000510708,ENST00000515439,	FrameShift 	1:ENST00000371023,ENST00000371026, 	1184:ENST00000371023,ENST00000371026, 	-1:ENST00000506980,ENST00000510708,ENST00000515439, 	-1:ENST00000506980,ENST00000510708,ENST00000515439, 	MTPGKHSGASARAANGGAWGYRDFRGGQKKGWCTTPQLVATMPVSPAGSHKQQNFGLNNATQPKKSISFFATMKATSVKGYTGANQSRMAVSKTVLIPPELKTVEKPNPNIKTTQVFDINGTDVTPRPLYHPDPLTGTAKPSKLLTSQEGSLGSEFISSYSLYQNTINPSTLGQFTRSVLGSSTVSKSSVSASESIAEDLEEPSYKRERLTSFTDLQVIRAAPEKIVTKEDLEKNIEIILTETETLRFFDLPTVMVSVESEEAEKVTQRNKNYEVLCRNRLGNDLYVERMMQTFNGAPKNKDVQCDKIIMEDKGIMSTAWDLYDSYNAMELVSLSVKQSVVESSSKANVLPKDQDQRLPGSTTEKNSETSSLMDIENVILAKIHEDEEDHSDAILKSDKFHQDLFFMERVLMENIFQPKLAAYRQLPVLKGI*:ENST00000371023-ENST00000515439,ENST00000371023-ENST00000506980,ENST00000371026-ENST00000515439,ENST00000371023-ENST00000510708,ENST00000371026-ENST00000510708,ENST00000371026-ENST00000506980, 	Intron:ENST00000371023,ENST00000371026, 	Intron:ENST00000506980,ENST00000510708,ENST00000515439, 	CDS:ENST00000371023,ENST00000371026, 	CDS:ENST00000506980,ENST00000510708,ENST00000515439, 	Repeat=WD 1,Repeat=WD 2,Repeat=WD 3,Repeat=WD 4,Repeat=WD 5,Repeat=WD 6,:ENST00000371023,ENST00000371026, 	NO_DOMAIN:ENST00000371023,ENST00000371026, 	NO_DOMAIN:ENST00000506980,ENST00000510708,ENST00000515439, 	Domain=DTW;Ontology_term=ECO:0000259;evidence=ECO:0000259|Pfam:PF03942,:ENST00000506980, Domain=DTW;Ontology_term=ECO:0000259;evidence=ECO:0000259|SMART:SM01144,:ENST00000515439, NO_DOMAIN:ENST00000510708, 
0.1392	5020	SRR064439	defuse	5	1	12	5	50135293	50158717	134240596	134343649	+	+	TMBIM6	PCBD2	50135384	134260354	ENSG00000139644|	ENSG00000132570|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000267115,	ENST00000254908,	FrameShift 	-1:ENST00000267115, 	-1:ENST00000267115, 	-1:ENST00000254908, 	-1:ENST00000254908, 	MSGKKKERK*:ENST00000267115-ENST00000254908, 	1:ENST00000267115, 	Intron:ENST00000254908, 	5UTR:ENST00000267115, 	CDS:ENST00000254908, 	DOMAIN_UNK:ENST00000267115, 	DOMAIN_UNK:ENST00000267115, 	NO_DOMAIN:ENST00000254908, 	NO_DOMAIN:ENST00000254908, 
0.0002	5021	SRR064439	defuse	11	2	20	13	2442280	2451499	96329411	96443301	-	+	SNRPB	DNAJC3	2448365	96375026	ENSG00000125835|	ENSG00000102580|	breast_cancer	SRR064439,	breast_cancer,	3p_KINASE	ENST00000438552,ENST00000339610,ENST00000336808,ENST00000381342,ENST00000303103,	ENST00000376795,ENST00000360638,	FrameShift 	1:ENST00000438552,ENST00000339610,ENST00000336808,ENST00000381342,ENST00000303103, 	14:ENST00000438552,ENST00000339610,ENST00000336808,ENST00000381342,ENST00000303103, 	-1:ENST00000376795,ENST00000360638, 	-1:ENST00000376795,ENST00000360638, 	MTVGKSSKMLQHIDYHATALQPG*:ENST00000438552-ENST00000376795,ENST00000381342-ENST00000376795,ENST00000339610-ENST00000360638,ENST00000381342-ENST00000360638,ENST00000438552-ENST00000360638,ENST00000303103-ENST00000360638,ENST00000336808-ENST00000360638,ENST00000303103-ENST00000376795,ENST00000336808-ENST00000376795,ENST00000339610-ENST00000376795, 	2:ENST00000438552,ENST00000339610,ENST00000336808,ENST00000381342,ENST00000303103, 	Intron:ENST00000376795,ENST00000360638, 	CDS:ENST00000438552,ENST00000339610,ENST00000336808,ENST00000381342,ENST00000303103, 	CDS:ENST00000376795,ENST00000360638, 	Domain=Sm;Ontology_term=ECO:0000259;evidence=ECO:0000259|SMART:SM00651,:ENST00000339610, NO_DOMAIN:ENST00000438552,ENST00000336808,ENST00000381342,ENST00000303103, 	NO_DOMAIN:ENST00000438552,ENST00000339610,ENST00000336808,ENST00000381342,ENST00000303103, 	NO_DOMAIN:ENST00000376795,ENST00000360638, 	Domain=TPR_REGION;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50293,Domain=J;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50076,:ENST00000376795, NO_DOMAIN:ENST00000360638, 
0.0002	5022	SRR064439	defuse	8	5	11	5	43577986	43878167	34929698	34959069	+	+	HSD17B12	DNAJC21	43877440	34955877	ENSG00000149084|	ENSG00000168724|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5023	SRR064439	defuse	27	21	MT	MT	12337	14148	9207	9990	+	+	MT-ND5	MT-CO3	13932	9570	ENSG00000198786|	ENSG00000198938|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5024	SRR064439	defuse	5	14	1	10	536816	659930	95717948	95721297	-	-	RP5-857K21.4	PIPSL	569025	95719822	ENSG00000230021|	ENSG00000180764|	breast_cancer	SRR064439,	breast_cancer,	3p_KINASE																
0.0002	5025	SRR064439	defuse	6	123	MT	MT	10760	12137	8366	8572	+	+	MT-ND4	J01415.25	12101	8406	ENSG00000198886|	ENSG00000228253|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0004	5026	SRR064439	defuse	5	8	12	5	53835525	53874945	91139695	91140346	+	-	PCBP2	PCBP2P3	53861013	91139830	ENSG00000197111|	ENSG00000248826|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000359282,	UnSpec,	FrameShift 	1:ENST00000359282, 	656:ENST00000359282, 	-1:UnSpec, 	-1:UnSpec, 	MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDVSFVFTSCFEKLPLPSKIVSLLSPK*:ENST00000359282-UnSpec, 	11:ENST00000359282, 	-1:UnSpec, 	CDS:ENST00000359282, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000359282, 	DOMAIN_UNK:ENST00000359282, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0001	5027	SRR064439	defuse	8	59	20	2	37353105	37358015	133038647	133038738	+	-	SLC32A1	AC097532.1	37353116	133038722	ENSG00000101438|	ENSG00000252318|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000217420,	UnSpec,	UnSpec 	0:ENST00000217420, 	0:ENST00000217420, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000217420-UnSpec, 	Intron:ENST00000217420, 	Intron:UnSpec, 	5UTR:ENST00000217420, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000217420, 	DOMAIN_UNK:ENST00000217420, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0001	5028	SRR064439	defuse	6	31	3	2	126061478	126076285	33050510	33151760	-	+	KLF15	AL121656.4	126062227	33141356	ENSG00000163884|	ENSG00000230876|	breast_cancer	SRR064286,SRR064439,SRR064441,	breast_cancer,	NO_KINASE	ENST00000296233,	UnSpec,	UnSpec 	0:ENST00000296233, 	0:ENST00000296233, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000296233-UnSpec, 	Intron:ENST00000296233, 	Intron:UnSpec, 	3UTR:ENST00000296233, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000296233, 	DOMAIN_UNK:ENST00000296233, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5029	SRR064439	defuse	8	12	8	9	96083960	96100152	8314246	10612723	-	-	RP11-320N21.2	PTPRD	96097822	9442142	ENSG00000254248|	ENSG00000153707|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5030	SRR064439	defuse	6	1	6	3	75947391	75960039	135867764	135916083	-	-	COX7A2	MSL2	75953472	135888283	ENSG00000112695|	ENSG00000174579|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000370081,ENST00000370089,	ENST00000309993,	FrameShift 	1:ENST00000370081,ENST00000370089, 	25:ENST00000370081,ENST00000370089, 	-1:ENST00000309993, 	-1:ENST00000309993, 	MHTQDSEVVPVPAWPFSLVVFSCGGPPKPIIGVDLECSQHKEMINV*:ENST00000370089-ENST00000309993,ENST00000370081-ENST00000309993, 	1:ENST00000370089, 2:ENST00000370081, 	Intron:ENST00000309993, 	CDS:ENST00000370081,ENST00000370089, 	CDS:ENST00000309993, 	NO_DOMAIN:ENST00000370081,ENST00000370089, 	NO_DOMAIN:ENST00000370081,ENST00000370089, 	NO_DOMAIN:ENST00000309993, 	Region=Sufficient for interaction with MSL1,:ENST00000309993, 
0.0003	5031	SRR064439	defuse	5	2	17	17	37617739	37690800	37702357	37702497	+	-	CDK12	U6.891	37687276	37702648	ENSG00000167258|	ENSG00000222777|	breast_cancer	SRR064439,	breast_cancer,	5p_KINASE																
0.0002	5032	SRR064439	defuse	5	8	1	1	536816	659930	237205505	238129359	-	+	RP5-857K21.4	RYR2	569024	237766397	ENSG00000230021|	ENSG00000198626|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000360064,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000360064, 	-1:ENST00000360064, 	KRRE*:UnSpec-ENST00000360064, 	-1:UnSpec, 	Intron:ENST00000360064, 	Intergenic:UnSpec, 	CDS:ENST00000360064, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000360064, 	DOMAIN_UNK:ENST00000360064, 
0.0002	5033	SRR064439	defuse	7	8	3	1	12875984	12883087	536816	659930	-	-	RPL32	RP5-857K21.4	12880886	568552	ENSG00000144713|	ENSG00000230021|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000273223,	UnSpec,	UnSpec 	1:ENST00000273223, 	98:ENST00000273223, 	-1:UnSpec, 	-1:UnSpec, 	MAALRPLVKPKIVKKRTKKFIRHQSDRYVKIKEEFALCTDANPPVYYFLQRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVH:ENST00000273223-UnSpec, 	3:ENST00000273223, 	-1:UnSpec, 	CDS:ENST00000273223, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000273223, 	DOMAIN_UNK:ENST00000273223, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5034	SRR064439	defuse	15	66	19	4	24184075	24184165	40812044	41218731	-	-	AC092279.1	APBB2	24184150	41218433	ENSG00000251948|	ENSG00000163697|	breast_cancer	SRR064437,SRR064439,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	5035	SRR064439	defuse	14	6	1	3	536816	659930	75263782	75264787	-	+	RP5-857K21.4	RP11-642N14.1	569012	75264381	ENSG00000230021|	ENSG00000213300|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5036	SRR064439	defuse	5	4	12	1	57031963	57039852	536816	659930	-	-	ATP5B	RP5-857K21.4	57037704	569352	ENSG00000110955|	ENSG00000230021|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000262030,	UnSpec,	UnSpec 	1:ENST00000262030, 	174:ENST00000262030, 	-1:UnSpec, 	-1:UnSpec, 	MLGFVGRVAAAPASGALRRLTPSASLPPAQLLLRAAPTAVHPVRDYAAQTSPSPKAGAATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFM:ENST00000262030-UnSpec, 	4:ENST00000262030, 	-1:UnSpec, 	CDS:ENST00000262030, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000262030, 	DOMAIN_UNK:ENST00000262030, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5037	SRR064439	defuse	5	41	MT	MT	10760	12137	7586	8269	+	+	MT-ND4	MT-CO2	11705	7713	ENSG00000198886|	ENSG00000198712|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5038	SRR064439	defuse	7	24	1	12	536816	659930	12264097	12264423	-	+	RP5-857K21.4	RP11-267J23.4	568268	12264163	ENSG00000230021|	ENSG00000198134|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5039	SRR064439	defuse	11	3	MT	MT	12337	14148	5904	7445	+	+	MT-ND5	MT-CO1	13928	6955	ENSG00000198786|	ENSG00000198804|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0001	5040	SRR064439	defuse	6	2	16	1	18802991	18812917	536816	659930	-	-	ARL6IP1	RP5-857K21.4	18812866	569363	ENSG00000170540|	ENSG00000230021|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000304414,	UnSpec,	UnSpec 	0:ENST00000304414, 	0:ENST00000304414, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000304414-UnSpec, 	Intron:ENST00000304414, 	Intron:UnSpec, 	5UTR:ENST00000304414, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000304414, 	DOMAIN_UNK:ENST00000304414, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0006	5041	SRR064439	defuse	6	8	17	8	39679869	39684560	145618444	145634753	-	-	KRT19	CPSF1	39681524	145625410	ENSG00000171345|	ENSG00000071894|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000361566,	ENST00000349769,	FrameShift 	1:ENST00000361566, 	140:ENST00000361566, 	-1:ENST00000349769, 	-1:ENST00000349769, 	MTSYSYRQSSATSSFGGLGGGSVRFGPGVAFRAPSIHGGSGGRGVSVSSARFVSSSSSGAYGGGYGGVLTASDGLLAGNEKLTMQNLNDRLASYLDKVRALEAANGELEVKIRDWYQKQGPGPSRDYSHYYTTIQDLRDKIWSSPSRAARCEPLPRP*:ENST00000361566-ENST00000349769, 	2:ENST00000361566, 	10:ENST00000349769, 	CDS:ENST00000361566, 	CDS:ENST00000349769, 	Region=Head,Region=Rod,Region=Coil 1A,Region=Linker 1,Region=Coil 1B,:ENST00000361566, 	Region=Linker 12,Region=Necessary for interaction with PNN,Region=Coil 2,Region=Rod-like helical tail,:ENST00000361566, 	NO_DOMAIN:ENST00000349769, 	NO_DOMAIN:ENST00000349769, 
0.0002	5042	SRR064439	defuse	19	36	MT	MT	12337	14148	9207	9990	+	+	MT-ND5	MT-CO3	12701	9217	ENSG00000198786|	ENSG00000198938|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0004	5043	SRR064439	defuse	5	30	16	1	31191445	31203127	536816	659930	+	-	FUS	RP5-857K21.4	31200520	569766	ENSG00000089280|	ENSG00000230021|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000254108,	UnSpec,	FrameShift 	1:ENST00000254108, 	558:ENST00000254108, 	-1:UnSpec, 	-1:UnSpec, 	MASNDYTQQATQSYGAYPTQPGQGYSQQSSQPYGQQSYSGYSQSTDTSGYGQSSYSSYGQSQNTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGSSSQSSSYGQPQSGSYSQQPSYGGQQQSYGQQQSYNPPQGYGQQNQYNSSSGGGGGGGGGGNYGQDQSSMSSGGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGGGGGGGGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFGGPRDQGSRHDSGEFTRGGMKRVAKVVSRLPGCSLKLL*:ENST00000254108-UnSpec, 	9:ENST00000254108, 	-1:UnSpec, 	CDS:ENST00000254108, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000254108, 	DOMAIN_UNK:ENST00000254108, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5044	SRR064439	defuse	8	6	MT	MT	12337	14148	10760	12137	+	+	MT-ND5	MT-ND4	14109	10835	ENSG00000198786|	ENSG00000198886|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5045	SRR064439	defuse	6	63	MT	MT	10760	12137	8366	8572	+	+	MT-ND4	J01415.25	11706	8480	ENSG00000198886|	ENSG00000228253|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5046	SRR064439	defuse	5	4	X	5	108297361	108297792	134240596	134343649	-	+	RN28S1	PCBD2	108297367	134263394	ENSG00000226958|	ENSG00000132570|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000254908,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000254908, 	-1:ENST00000254908, 	CECHN*:UnSpec-ENST00000254908, 	-1:UnSpec, 	Intron:ENST00000254908, 	Intergenic:UnSpec, 	CDS:ENST00000254908, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000254908, 	DOMAIN_UNK:ENST00000254908, 
0.0002	5047	SRR064439	defuse	5	22	1	X	566454	567996	108297361	108297792	+	-	RP5-857K21.6	RN28S1	567095	108297612	ENSG00000237973|	ENSG00000226958|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0003	5048	SRR064439	defuse	7	2	17	17	48503519	48552206	51062880	51065012	+	+	ACSF2	AC102948.1	48548600	51089613	ENSG00000167107|	ENSG00000227011|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000300441,	UnSpec,	FrameShift 	1:ENST00000300441, 	475:ENST00000300441, 	-1:UnSpec, 	-1:UnSpec, 	MAVYVGMLRLGRLCAGSSGVLGARAALSRSWQEARLQGVRFLSSREVDRMVSTPIGGLSYVQGCTKKHLNSKTVGQCLETTAQRVPEREALVVLHEDVRLTFAQLKEEVDKAASGLLSIGLCKGDRLGMWGPNSYAWVLMQLATAQAGIILVSVNPAYQAMELEYVLKKVGCKALVFPKQFKTQQYYNVLKQICPEVENAQPGALKSQRLPDLTTVISVDAPLPGTLLLDEVVAAGSTRQHLDQLQYNQQFLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNSNILGERLKLHEKTPEQLRMILPNPLYHCLGSVAGTMMCLMYGATLILASPIFNGKKALEAISRERGTFLYGTPTMFVDILNQPDFSSYDISTMCGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENSPVTFAHFPEDTVEQKAESVGRIMPHTEVSP*:ENST00000300441-UnSpec, 	Intron:ENST00000300441, 	-1:UnSpec, 	CDS:ENST00000300441, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000300441, 	DOMAIN_UNK:ENST00000300441, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0001	5049	SRR064439	defuse	7	20	10	14	124134173	124191867	50300810	50311552	+	-	PLEKHA1	AL627171.1	124190697	50329313	ENSG00000107679|	ENSG00000197502|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000368988,	UnSpec,	UnSpec 	0:ENST00000368988, 	0:ENST00000368988, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000368988-UnSpec, 	Intron:ENST00000368988, 	Intron:UnSpec, 	3UTR:ENST00000368988, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000368988, 	DOMAIN_UNK:ENST00000368988, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5050	SRR064439	defuse	5	2	10	10	37529815	37530977	37537046	37604729	+	+	RP11-20F24.2	RP11-20F24.3	37531772	37537043	ENSG00000234918|	ENSG00000240800|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0189	5051	SRR064439	defuse	8	3	20	20	57226328	57254582	55926066	55954267	+	+	STX16	RAE1	57227143	55929088	ENSG00000124222|	ENSG00000101146|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000355957,	ENST00000371242,	FrameShift 	1:ENST00000355957, 	27:ENST00000355957, 	-1:ENST00000371242, 	-1:ENST00000371242, 	MATRRLTDAFLLLRNNSIQNRQLLAEQVQNEPVWNNLRFWNQWDQHVWQCNYRQSQSHEGY*:ENST00000355957-ENST00000371242, 	1:ENST00000355957, 	-1:ENST00000371242, 	CDS:ENST00000355957, 	5UTR:ENST00000371242, 	DOMAIN_UNK:ENST00000355957, 	DOMAIN_UNK:ENST00000355957, 	DOMAIN_UNK:ENST00000371242, 	DOMAIN_UNK:ENST00000371242, 
0.0002	5052	SRR064439	defuse	7	14	MT	MT	12337	14148	8527	9207	+	+	MT-ND5	MT-ATP6	14059	8630	ENSG00000198786|	ENSG00000198899|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5053	SRR064439	defuse	7	6	MT	MT	4470	5511	14149	14673	+	-	MT-ND2	MT-ND6	5315	14315	ENSG00000198763|	ENSG00000198695|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0003	5054	SRR064439	defuse	9	1	5	5	134240596	134343649	177482605	177483195	+	+	PCBD2	RP11-889L3.1	134260352	177482898	ENSG00000132570|	ENSG00000218227|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000254908,	UnSpec,	FrameShift 	1:ENST00000254908, 	4804:ENST00000254908, 	-1:UnSpec, 	-1:UnSpec, 	MAAVLGALGATRRLLAALRGQSLGLAAMSSGTHRLTAEERNQAILDLKAAGWSELSERDAIYKEFSFHNFNQVIVINSC*:ENST00000254908-UnSpec, 	Intron:ENST00000254908, 	-1:UnSpec, 	CDS:ENST00000254908, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000254908, 	DOMAIN_UNK:ENST00000254908, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.9752	5055	SRR064439	defuse	5	2	20	5	3451687	3631769	149822753	149829319	+	-	ATRN	RPS14	3596588	149822838	ENSG00000088812|	ENSG00000164587|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000262919,	ENST00000401695,	InFrame 	1:ENST00000262919, 	1267:ENST00000262919, 	0:ENST00000401695, 	0:ENST00000401695, 	MVAAAAATEARLRRRTAATAALAGRSGGPHWDWDVTRAGRPGLGAGLRLPRLLSPPLRPRLLLLLLLLSPPLLLLLLPCEAEAAAAAAAVSGSAAAEAKECDRPCVNGGRCNPGTGQCVCPAGWVGEQCQHCGGRFRLTGSSGFVTDGPGNYKYKTKCTWLIEGQPNRIMRLRFNHFATECSWDHLYVYDGDSIYAPLVAAFSGLIVPERDGNETVPEVVATSGYALLHFFSDAAYNLTGFNITYSFDMCPNNCSGRGECKISNSSDTVECECSENWKGEACDIPHCTDNCGFPHRGICNSSDVRGCSCFSDWQGPGCSVPVPANQSFWTREEYSNLKLPRASHKAVVNGNIMWVVGGYMFNHSDYNMVLAYDLASREWLPLNRSVNNVVVRYGHSLALYKDKIYMYGGKIDSTGNVTNELRVFHIHNESWVLLTPKAKEQYAVVGHSAHIVTLKNGRVVMLVIFGHCPLYGYISNVQEYDLDKNTWSILHTQGALVQGGYGHSSVYDHRTRALYVHGGYKAFSANKYRLADDLYRYDVDTQMWTILKDSRFFRYLHTAVIVSGTMLVFGGNTHNDTSMSHGAKCFSSDFMAYDIACDRWSVLPRPDLHHDVNRFGHSAVLHNSTMYVFGGFNSLLLSDILVFTSEQCDAHRSEAACLAAGPGIRCVWNTGSSQCISWALATDEQEEKLKSECFSKRTLDHDRCDQHTDCYSCTANTNDCHWCNDHCVPRNHSCSEGQISIFRYENCPKDNPMYYCNKKTSCRSCALDQNCQWEPRNQECIALPENICGIGWHLVGNSCLKITTAKENYDNAKLFCRNHNALLASLTTQKKVEFVLKQLRIMQSSQSMSKLTLTPWVGLRKINVSYWCWEDMSPFTNSLLQWMPSEPSDAGFCGILSEPSTRGLKAATCINPLNGSVCERPANHSAKQCRTPCALRTACGDCTSGSSECMWCSNMKQCVDSNAYVASFPFGQCMEWYTMSTCPPENCSGYCTCSHCLEQPGCGWCTDPSNTGKGKCIEGSYKGPVKMPSQAPTGNFYPQPLLNSSMCLEDSRYNWSFIHCPACQCNGHSKCINQSICEKCENLTTGKHCETCISGFYGDPTNGGKCQPCKCNGHASLCNTNTGKCFCTTKGVKGDECQLCEVENRYQGNPLRGTCYYTLLIDYQFTFSLSQEDDRYYTAINFVATPDEQNRDLDMFINASKNFNLNITWAASFSAGTQAGEEMPVVSKTNIKEYKDSFSNEKFDFRNHPNITFFVYVSNFTWPIKIQ:ENST00000262919-ENST00000401695, 	Intron:ENST00000262919, 	-1:ENST00000401695, 	CDS:ENST00000262919, 	3UTR:ENST00000401695, 	Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=EGF-like;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00076,Domain=CUB;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00059,Repeat=Kelch 1,Repeat=Kelch 2,Repeat=Kelch 3,Repeat=Kelch 4,Repeat=Kelch 5,Repeat=Kelch 6,Domain=PSI 1,Domain=PSI 2,Domain=C-type lectin;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00040,Domain=PSI 3,Domain=PSI 4,Domain=Laminin EGF-like 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00460,Domain=Laminin EGF-like 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00460,:ENST00000262919, 	Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,:ENST00000262919, 	DOMAIN_UNK:ENST00000401695, 	DOMAIN_UNK:ENST00000401695, 
0.0001	5056	SRR064439	defuse	5	16	1	1	150266289	150281414	536816	659930	+	-	MRPS21	RP5-857K21.4	150266746	568204	ENSG00000187145|	ENSG00000230021|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000309092,	UnSpec,	UnSpec 	0:ENST00000309092, 	0:ENST00000309092, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000309092-UnSpec, 	Intron:ENST00000309092, 	Intron:UnSpec, 	5UTR:ENST00000309092, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000309092, 	DOMAIN_UNK:ENST00000309092, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5057	SRR064439	defuse	8	72	MT	MT	577	647	12337	14148	+	+	J01415.2	MT-ND5	341	12477	ENSG00000210049|	ENSG00000198786|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.9941	5058	SRR064439	defuse	9	9	17	17	37560538	37607521	53046088	53241646	-	+	MED1	STXBP4	37607291	53218671	ENSG00000125686|	ENSG00000166263|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000300651,ENST00000394287,	ENST00000376352,	InFrame 	1:ENST00000300651,ENST00000394287, 	8:ENST00000300651,ENST00000394287, 	497:ENST00000376352, 	553:ENST00000376352, 	MKAQGETEGLPYGWEEAYTADGIKYFINHVTQTTSWIHPVMSVLNLSRSEENEEDCSRELPNQKS:ENST00000394287-ENST00000376352,ENST00000300651-ENST00000376352, 	1:ENST00000300651,ENST00000394287, 	17:ENST00000376352, 	CDS:ENST00000300651,ENST00000394287, 	CDS:ENST00000376352, 	Region=Interaction with the Mediator complex and THRA,:ENST00000300651,ENST00000394287, 	Region=Interaction with ESR1,Region=Interaction with the Mediator complex,Region=Interaction with the Mediator complex,Region=Interaction with THRA,Region=Interaction with VDR,Region=Interaction with PPARGC1A and THRA,Region=Interaction with ESR1,Region=Interaction with GATA1;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:24245781;Dbxref=PMID:24245781,Region=Interaction with TP53,:ENST00000300651,ENST00000394287, 	Domain=WW;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00224,:ENST00000376352, 	Domain=PDZ;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,:ENST00000376352, 
0.0002	5059	SRR064439	defuse	5	1	9	10	134269480	134375584	21802407	21814611	+	-	PRRC2B	C10orf140	134357869	21811019	ENSG00000130723|	ENSG00000180592|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.5700	5060	SRR064439	defuse	5	3	17	6	1367480	1395995	12008995	12165232	-	+	MYO1C	HIVEP1	1368125	12145751	ENSG00000197879|	ENSG00000095951|	breast_cancer	SRR064286,SRR064439,	breast_cancer,	NO_KINASE	ENST00000359786,	ENST00000379388,	InFrame 	1:ENST00000359786, 	1063:ENST00000359786, 	-1:ENST00000379388, 	-1:ENST00000379388, 	MALQVELVPTGEIIRVVHPHRPCKLALGSDGVRVTMESALTARDRVGVQDFVLLENFTSEAAFIENLRRRFRENLIYTYIGPVLVSVNPYRDLQIYSRQHMERYRGVSFYEVPPHLFAVADTVYRALRTERRDQAVMISGESGAGKTEATKRLLQFYAETCPAPERGGAVRDRLLQSNPVLEAFGNAKTLRNDNSSRFGKYMDVQFDFKGAPVGGHILSYLLEKSRVVHQNHGERNFHIFYQLLEGGEEETLRRLGLERNPQSYLYLVKGQCAKVSSINDKSDWKVVRKALTVIDFTEDEVEDLLSIVASVLHLGNIHFAANEESNAQVTTENQLKYLTRLLSVEGSTLREALTHRKIIAKGEELLSPLNLEQAAYARDALAKAVYSRTFTWLVGKINRSLASKDVESPSWRSTTVLGLLDIYGFEVFQHNSFEQFCINYCNEKLQQLFIELTLKSEQEEYEAEGIAWEPVQYFNNKIICDLVEEKFKGIISILDEECLRPGEATDLTFLEKLEDTVKHHPHFLTHKLADQRTRKSLGRGEFRLLHYAGEVTYSVTGFLDKNNDLLFRNLKETMCSSKNPIMSQCFDRSELSDKKRPETVATQFKMSLLQLVEILQSKEPAYVRCIKPNDAKQPGRFDEVLIRHQVKYLGLLENLRVRRAGFAYRRKYEAFLQRYKSLCPETWPTWAGRPQDGVAVLVRHLGYKPEEYKMGRTKIFIRFPKTLFATEDALEVRRQSLATKIQAAWRGFHWRQKFLRVKRSAICIQSWWRGTLGRRKAAKRKWAAQTIRRLIRGFVLRHAPRCPENAFFLDHVRTSFLLNLRRQLPQNVLDTSWPTPPPALREASELLRELCIKNMVWKYCRSISPEWKQQLQQKAVASEIFKGKKDNYPQSVPRLFISTRLGTDEISPRVLQALGSEPIQYAVPVVKYDRKGYKPRSRQLLLTPNAVVIVEDAKVKQRIDYANLTGISVSSLSDSLFVLHVQRADNKQKGDVVLQSDHVIETLTKTALSANRVNSININQGSITFAGGPGRDGTIDFTPGSELLITKAKNGHLAVVAPRLNSR:ENST00000359786-ENST00000379388, 	Intron:ENST00000359786, 	Intron:ENST00000379388, 	3UTR:ENST00000359786, 	CDS:ENST00000379388, 	Domain=Myosin motor,Domain=IQ 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=IQ 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=TH1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01093,:ENST00000359786, 	NO_DOMAIN:ENST00000359786, 	DOMAIN_UNK:ENST00000379388, 	DOMAIN_UNK:ENST00000379388, 
0.0002	5061	SRR064439	defuse	174	250	12	1	34372314	34372611	91726323	91870426	-	-	AC140847.1	HFM1	34372659	91852866	ENSG00000243092|	ENSG00000162669|	breast_cancer	SRR064439,SRR064440,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000370421,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000370421, 	-1:ENST00000370421, 	FDVGSSYHCEAEFTKRWIVHPLIGNVSWRFYFIDKTDEITGHC*:UnSpec-ENST00000370421, 	-1:UnSpec, 	Intron:ENST00000370421, 	Intergenic:UnSpec, 	CDS:ENST00000370421, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:ENST00000370421, 
0.0002	5062	SRR064439	defuse	7	47	MT	MT	577	647	4470	5511	+	+	J01415.2	MT-ND2	366	5058	ENSG00000210049|	ENSG00000198763|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5063	SRR064439	defuse	5	51	16	18	33961052	33962503	45357922	45457515	-	-	NCRNA00273	SMAD2	33963068	45379865	ENSG00000256642|	ENSG00000175387|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000262160,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000262160, 	-1:ENST00000262160, 	WSAVGCPQLTATSASWIQARRPATP*:UnSpec-ENST00000262160, 	-1:UnSpec, 	Intron:ENST00000262160, 	Intergenic:UnSpec, 	CDS:ENST00000262160, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000262160, 	DOMAIN_UNK:ENST00000262160, 
0.0004	5064	SRR064439	defuse	6	14	19	1	49990811	49995565	566454	567996	+	+	RPL13A	RP5-857K21.6	49993111	566884	ENSG00000142541|	ENSG00000237973|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000391857,	UnSpec,	FrameShift 	1:ENST00000391857, 	741:ENST00000391857, 	-1:UnSpec, 	-1:UnSpec, 	MAEVQVWAPRGPGRQGAGWDPGRNGVAPSLSCMFCGA*:ENST00000391857-UnSpec, 	2:ENST00000391857, 	-1:UnSpec, 	CDS:ENST00000391857, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000391857, 	DOMAIN_UNK:ENST00000391857, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5065	SRR064439	defuse	14	24	MT	MT	14149	14673	8527	9207	-	+	MT-ND6	MT-ATP6	14578	8569	ENSG00000198695|	ENSG00000198899|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0003	5066	SRR064439	defuse	89	64	1	X	91726323	91870426	108297361	108297792	-	-	HFM1	RN28S1	91853147	108297794	ENSG00000162669|	ENSG00000226958|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000370421,	UnSpec,	FrameShift 	1:ENST00000370421, 	2332:ENST00000370421, 	-1:UnSpec, 	-1:UnSpec, 	MLKSNDCLFSLENLFFEKPDEVENHPDNEKSLDWFLPPAPLISEIPDTQELEEELESHKLLGQEKRPKMLTSNLKITNEDTNYISLTQKFQFAFPSDKYEQDDLNLEGVGNNDLSHIAGKLTYASQKYKNHIGTEIAPEKSVPDDTKLVNFAEDKGESTSVFRKR*:ENST00000370421-UnSpec, 	Intron:ENST00000370421, 	-1:UnSpec, 	CDS:ENST00000370421, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0004	5067	SRR064439	defuse	8	8	5	1	170814120	170838141	565020	566063	+	+	NPM1	RP5-857K21.8	170819778	565862	ENSG00000181163|	ENSG00000225630|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000296930,	UnSpec,	FrameShift 	1:ENST00000296930, 	442:ENST00000296930, 	-1:UnSpec, 	-1:UnSpec, 	MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVGMLFLYIILLSLSSLVQLLGSQFGLKAWV*:ENST00000296930-UnSpec, 	5:ENST00000296930, 	-1:UnSpec, 	CDS:ENST00000296930, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000296930, 	DOMAIN_UNK:ENST00000296930, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5068	SRR064439	defuse	5	6	17	6	7760005	7761172	131148546	131158273	-	+	LSMD1	AL109938.1	7760701	131122902	ENSG00000183011|	ENSG00000256162|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000333775,	UnSpec,	UnSpec 	1:ENST00000333775, 	13:ENST00000333775, 	-1:UnSpec, 	-1:UnSpec, 	MAVAVGVRAAPVL:ENST00000333775-UnSpec, 	1:ENST00000333775, 	-1:UnSpec, 	CDS:ENST00000333775, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000333775, 	DOMAIN_UNK:ENST00000333775, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5069	SRR064439	defuse	19	16	5	2	71146740	71146942	230045488	230045666	+	-	AC116340.1	AC006368.1	71146774	230045489	ENSG00000239935|	ENSG00000241530|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0005	5070	SRR064439	defuse	15	31	17	17	48939584	48945339	35874900	35969488	-	-	TOB1	SYNRG	48943419	35880751	ENSG00000141232|	ENSG00000006114|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000268957,	ENST00000339208,	FrameShift 	-1:ENST00000268957, 	-1:ENST00000268957, 	-1:ENST00000339208, 	-1:ENST00000339208, 	MYGGFVPEEHSWSTRARPVDTLLLDFPLFPVRV*:ENST00000268957-ENST00000339208, 	Intron:ENST00000268957, 	19:ENST00000339208, 	5UTR:ENST00000268957, 	CDS:ENST00000339208, 	DOMAIN_UNK:ENST00000268957, 	DOMAIN_UNK:ENST00000268957, 	NO_DOMAIN:ENST00000339208, 	NO_DOMAIN:ENST00000339208, 
0.0002	5071	SRR064439	defuse	8	2	2	8	133038647	133038738	145539954	145550573	-	-	AC097532.1	DGAT1	133038832	145560595	ENSG00000252318|	ENSG00000185000|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5072	SRR064439	defuse	12	6	1	2	565020	566063	217536828	217560248	+	-	RP5-857K21.8	IGFBP5	565832	217540046	ENSG00000225630|	ENSG00000115461|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0004	5073	SRR064439	defuse	5	6	20	19	56884752	56942563	17212466	17324103	+	+	RAB22A	MYO9B	56886178	17256207	ENSG00000124209|	ENSG00000099331|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE	ENST00000244040,	ENST00000397274,ENST00000319396,	FrameShift 	1:ENST00000244040, 	38:ENST00000244040, 	-1:ENST00000397274,ENST00000319396, 	-1:ENST00000397274,ENST00000319396, 	MALRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGLLEMPRQPTTTTPAGLGNSSKSAT*:ENST00000244040-ENST00000319396,ENST00000244040-ENST00000397274, 	2:ENST00000244040, 	2:ENST00000397274,ENST00000319396, 	CDS:ENST00000244040, 	CDS:ENST00000397274,ENST00000319396, 	NO_DOMAIN:ENST00000244040, 	NO_DOMAIN:ENST00000244040, 	NO_DOMAIN:ENST00000397274,ENST00000319396, 	Domain=Ras-associating;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00166,Domain=Myosin motor,Domain=IQ 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=IQ 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=IQ 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=IQ 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00116,Domain=Rho-GAP;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00172,Region=Actin-binding;Ontology_term=ECO:0000305;evidence=ECO:0000305,Region=Neck or regulatory domain;Ontology_term=ECO:0000305;evidence=ECO:0000305,Region=Tail;Ontology_term=ECO:0000305;evidence=ECO:0000305,Region=Interaction with RHOA;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:26529257;Dbxref=PMID:26529257,:ENST00000397274, NO_DOMAIN:ENST00000319396, 
0.0002	5074	SRR064439	defuse	6	4	X	1	49126306	49157929	168433452	168464882	+	-	PPP1R3F	RP5-968D22.3	49157850	168454946	ENSG00000049769|	ENSG00000237658|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5075	SRR064439	defuse	19	20	MT	MT	577	647	10760	12137	+	+	J01415.2	MT-ND4	396	11110	ENSG00000210049|	ENSG00000198886|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5076	SRR064439	defuse	6	3	1	1	247373993	247405125	247353153	247372795	-	-	RP11-488L18.8	RP11-488L18.4	247373993	247365397	ENSG00000232347|	ENSG00000227671|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5077	SRR064439	defuse	5	154	1	17	566454	567996	33474836	33516364	+	+	RP5-857K21.6	UNC45B	567445	33478229	ENSG00000237973|	ENSG00000141161|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000268876,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000268876, 	-1:ENST00000268876, 	KYA*:UnSpec-ENST00000268876, 	-1:UnSpec, 	Intron:ENST00000268876, 	Intergenic:UnSpec, 	CDS:ENST00000268876, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000268876, 	DOMAIN_UNK:ENST00000268876, 
0.0002	5078	SRR064439	defuse	5	25	1	1	156278759	156337664	536816	659930	-	-	CCT3	RP5-857K21.4	156288706	569117	ENSG00000163468|	ENSG00000230021|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000295688,	UnSpec,	UnSpec 	1:ENST00000295688, 	214:ENST00000295688, 	-1:UnSpec, 	-1:UnSpec, 	MMGHRPVLVLSQNTKRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTTVVISAYRKALDDMISTLKKISIPVDISDSDMMLNIINSSITTKAISRWSSLACNIALDAVKMVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPR:ENST00000295688-UnSpec, 	8:ENST00000295688, 	-1:UnSpec, 	CDS:ENST00000295688, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000295688, 	DOMAIN_UNK:ENST00000295688, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5079	SRR064439	defuse	7	26	MT	MT	12337	14148	9207	9990	+	+	MT-ND5	MT-CO3	14014	9219	ENSG00000198786|	ENSG00000198938|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5080	SRR064439	defuse	31	88	19	17	24184075	24184165	60019967	60142643	-	-	AC092279.1	MED13	24184151	60142589	ENSG00000251948|	ENSG00000108510|	breast_cancer	SRR064437,SRR064439,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	5081	SRR064439	defuse	7	26	21	1	27252861	27543446	536816	659930	-	-	APP	RP5-857K21.4	27423396	568202	ENSG00000142192|	ENSG00000230021|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE	ENST00000346798,	UnSpec,	UnSpec 	1:ENST00000346798, 	194:ENST00000346798, 	-1:UnSpec, 	-1:UnSpec, 	MLPGLALLLLAAWTARALEVPTDGNAGLLAEPQIAMFCGRLNMHMNVQNGKWDSDPSGTKTCIDTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRGRKQCKTHPHFVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLAEESD:ENST00000346798-UnSpec, 	5:ENST00000346798, 	-1:UnSpec, 	CDS:ENST00000346798, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000346798, 	DOMAIN_UNK:ENST00000346798, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5082	SRR064439	defuse	6	91	MT	MT	10760	12137	4470	5511	+	+	MT-ND4	MT-ND2	12104	5263	ENSG00000198886|	ENSG00000198763|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5083	SRR064439	defuse	6	9	MT	MT	10760	12137	4470	5511	+	+	MT-ND4	MT-ND2	11722	5249	ENSG00000198886|	ENSG00000198763|	breast_cancer	SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5084	SRR064440	defuse	74	98	12	1	34372314	34372611	91726323	91870426	-	-	AC140847.1	HFM1	34372659	91852866	ENSG00000243092|	ENSG00000162669|	breast_cancer	SRR064439,SRR064440,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000370421,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000370421, 	-1:ENST00000370421, 	FDVGSSYHCEAEFTKRWIVHPLIGNVSWRFYFIDKTDEITGHC*:UnSpec-ENST00000370421, 	-1:UnSpec, 	Intron:ENST00000370421, 	Intergenic:UnSpec, 	CDS:ENST00000370421, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:ENST00000370421, 
0.0002	5085	SRR064440	defuse	5	15	11	12	2016406	2022700	53290971	53298868	-	-	H19	KRT8	2019014	53291060	ENSG00000130600|	ENSG00000170421|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE																
0.0002	5086	SRR064440	defuse	33	232	5	2	71146740	71146942	133038647	133038738	+	-	AC116340.1	AC097532.1	71146755	133038453	ENSG00000239935|	ENSG00000252318|	breast_cancer	SRR064437,SRR064439,SRR064440,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	5087	SRR064440	defuse	6	529	19	2	24184075	24184165	33050510	33151760	-	+	AC092279.1	AL121656.4	24184164	33141648	ENSG00000251948|	ENSG00000230876|	breast_cancer	SRR064438,SRR064440,	breast_cancer,	NO_KINASE																
0.0003	5088	SRR064440	defuse	6	480	8	19	22446787	22459597	24184075	24184165	+	-	AC037459.4	AC092279.1	22457324	24184153	ENSG00000248235|	ENSG00000251948|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	ENST00000430850,	UnSpec,	FrameShift 	1:ENST00000430850, 	2114:ENST00000430850, 	-1:UnSpec, 	-1:UnSpec, 	MDSEGGSLLLDEDSEVFKMLQENREGRAAPRQSSSFRLLQEALEAEERGGTPAFLPSSLSPQSSLPASRALATPPKLHTCEKCSTSIANQAVRIQEGRYRHPGCYTCADCGLNLKMRGHFWVGDELYCEKHARQRYSAPATLSSRA*:ENST00000430850-UnSpec, 	Intron:ENST00000430850, 	-1:UnSpec, 	CDS:ENST00000430850, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000430850, 	DOMAIN_UNK:ENST00000430850, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0001	5089	SRR064440	defuse	5	11	19	19	39306068	39322497	39327029	39342987	-	-	ECH1	HNRNPL	39314037	39327516	ENSG00000104823|	ENSG00000104824|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000221418,	ENST00000388750,ENST00000388749,ENST00000221419,	FrameShift 	1:ENST00000221418, 	2676:ENST00000221418, 	-1:ENST00000388750,ENST00000388749,ENST00000221419, 	-1:ENST00000388750,ENST00000388749,ENST00000221419, 	MAAGIVASRRLRDLLTRRLTGSNYPGLSISLRLTGSSAQEEASGVALGEAPDHSYESLRVTSAQKHVLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGTRRSSHTLPAFLAPGNRQWSSASELGF*:ENST00000221418-ENST00000221419,ENST00000221418-ENST00000388750,ENST00000221418-ENST00000388749, 	Intron:ENST00000221418, 	Intron:ENST00000388750,ENST00000388749,ENST00000221419, 	CDS:ENST00000221418, 	CDS:ENST00000388750,ENST00000388749,ENST00000221419, 	Region=Substrate binding;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P42126,:ENST00000221418, 	NO_DOMAIN:ENST00000221418, 	NO_DOMAIN:ENST00000388750,ENST00000388749,ENST00000221419, 	Domain=RRM (RNA recognition motif);Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50102,:ENST00000388749, Domain=RRM 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00176,Domain=RRM 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00176,Domain=RRM 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00176,Domain=RRM 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00176,:ENST00000221419, NO_DOMAIN:ENST00000388750, 
0.0004	5090	SRR064440	defuse	142	4750	17	11	33474836	33516364	83166055	85338966	+	-	UNC45B	DLG2	33478117	85195042	ENSG00000141161|	ENSG00000150672|	breast_cancer	SRR064286,SRR064287,SRR064438,SRR064440,	breast_cancer,	NO_KINASE	ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570,	ENST00000376104,	FrameShift 	1:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	418:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	-1:ENST00000376104, 	-1:ENST00000376104, 	MAEVEAVQLKEEGNRHFQLQDYKAATNSYSQALKLTKDKALLATLYRNRAACGLKTESYVQAASDASRAIDINSSDIKALYRRCQALEHLGKLDQAFKDVQRCATLEPRNQNFQEMLRRLNTSIQEKVSWASSHNPWLPSPSLHS*:ENST00000268876-ENST00000376104,ENST00000433649-ENST00000376104,ENST00000378449-ENST00000376104,ENST00000394570-ENST00000376104, 	Intron:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	Intron:ENST00000376104, 	CDS:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	CDS:ENST00000376104, 	NO_DOMAIN:ENST00000378449,ENST00000433649,ENST00000268876, Repeat=TPR 1,Repeat=TPR 2,Repeat=TPR 3,Repeat=ARM 1,Repeat=ARM 2,:ENST00000394570, 	NO_DOMAIN:ENST00000378449,ENST00000433649, Repeat=ARM 3,:ENST00000394570, Repeat=TPR 1,Repeat=TPR 2,Repeat=TPR 3,Repeat=ARM 1,Repeat=ARM 2,Repeat=ARM 3,:ENST00000268876, 	NO_DOMAIN:ENST00000376104, 	Domain=PDZ 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=PDZ 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=PDZ 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=SH3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00192,Domain=Guanylate kinase-like;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00100,:ENST00000376104, 
0.0004	5091	SRR064440	defuse	8	12	8	17	125500726	125551699	38060848	38077313	-	-	TATDN1	GSDMB	125551169	38066177	ENSG00000147687|	ENSG00000073605|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776,	ENST00000520542,ENST00000523371,ENST00000394179,ENST00000354894,ENST00000360317,ENST00000394175,ENST00000418519,ENST00000524039,ENST00000437352,ENST00000309481,	FrameShift 	1:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	39:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	-1:ENST00000520542,ENST00000523371,ENST00000394179,ENST00000354894,ENST00000360317,ENST00000394175,ENST00000418519,ENST00000524039,ENST00000437352,ENST00000309481, 	-1:ENST00000520542,ENST00000523371,ENST00000394179,ENST00000354894,ENST00000360317,ENST00000394175,ENST00000418519,ENST00000524039,ENST00000437352,ENST00000309481, 	MSRFKFIGKRSVFHALGSF*:ENST00000519776-ENST00000394175,ENST00000520321-ENST00000523371,ENST00000276692-ENST00000394179,ENST00000276692-ENST00000360317,ENST00000522927-ENST00000394175,ENST00000276692-ENST00000437352,ENST00000520321-ENST00000309481,ENST00000522310-ENST00000524039,ENST00000522310-ENST00000418519,ENST00000276692-ENST00000524039,ENST00000522310-ENST00000437352,ENST00000522310-ENST00000354894,ENST00000523214-ENST00000524039,ENST00000520321-ENST00000394179,ENST00000519776-ENST00000520542,ENST00000519776-ENST00000394179,ENST00000522310-ENST00000523371,ENST00000520321-ENST00000394175,ENST00000520321-ENST00000437352,ENST00000519776-ENST00000524039,ENST00000519776-ENST00000360317,ENST00000523214-ENST00000354894,ENST00000519776-ENST00000354894,ENST00000523214-ENST00000418519,ENST00000523214-ENST00000394179,ENST00000522310-ENST00000520542,ENST00000276692-ENST00000520542,ENST00000520321-ENST00000354894,ENST00000519776-ENST00000418519,ENST00000522927-ENST00000360317,ENST00000276692-ENST00000354894,ENST00000522927-ENST00000523371,ENST00000522927-ENST00000418519,ENST00000520321-ENST00000520542,ENST00000522310-ENST00000394175,ENST00000523214-ENST00000437352,ENST00000519776-ENST00000437352,ENST00000523214-ENST00000360317,ENST00000522310-ENST00000309481,ENST00000276692-ENST00000309481,ENST00000523214-ENST00000523371,ENST00000522927-ENST00000354894,ENST00000523214-ENST00000394175,ENST00000522927-ENST00000520542,ENST00000522927-ENST00000437352,ENST00000522927-ENST00000394179,ENST00000520321-ENST00000360317,ENST00000523214-ENST00000520542,ENST00000519776-ENST00000309481,ENST00000522310-ENST00000360317,ENST00000522927-ENST00000524039,ENST00000522927-ENST00000309481,ENST00000276692-ENST00000418519,ENST00000276692-ENST00000394175,ENST00000522310-ENST00000394179,ENST00000520321-ENST00000418519,ENST00000276692-ENST00000523371,ENST00000523214-ENST00000309481,ENST00000520321-ENST00000524039,ENST00000519776-ENST00000523371, 	Intron:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	4:ENST00000520542,ENST00000354894,ENST00000394179,ENST00000418519,ENST00000437352,ENST00000309481, 3:ENST00000394175,ENST00000360317,ENST00000523371,ENST00000524039, 	CDS:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	CDS:ENST00000520542,ENST00000523371,ENST00000394179,ENST00000354894,ENST00000360317,ENST00000394175,ENST00000418519,ENST00000524039,ENST00000437352,ENST00000309481, 	NO_DOMAIN:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	NO_DOMAIN:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	NO_DOMAIN:ENST00000520542,ENST00000523371,ENST00000394179,ENST00000354894,ENST00000360317,ENST00000394175,ENST00000418519,ENST00000524039,ENST00000437352,ENST00000309481, 	NO_DOMAIN:ENST00000520542,ENST00000523371,ENST00000394179,ENST00000354894,ENST00000360317,ENST00000394175,ENST00000418519,ENST00000524039,ENST00000437352,ENST00000309481, 
0.0004	5092	SRR064440	defuse	6	10	17	17	37356536	37360980	56634042	56769416	+	-	RPL19	TEX14	37357550	56769043	ENSG00000108298|	ENSG00000121101|	breast_cancer	SRR064440,	breast_cancer,	3p_KINASE	ENST00000225430,	ENST00000240361,	FrameShift 	1:ENST00000225430, 	317:ENST00000225430, 	-1:ENST00000240361, 	-1:ENST00000240361, 	MR*:ENST00000225430-ENST00000240361, 	2:ENST00000225430, 	-1:ENST00000240361, 	CDS:ENST00000225430, 	5UTR:ENST00000240361, 	DOMAIN_UNK:ENST00000225430, 	DOMAIN_UNK:ENST00000225430, 	DOMAIN_UNK:ENST00000240361, 	DOMAIN_UNK:ENST00000240361, 
0.0002	5093	SRR064440	defuse	8	2031	19	17	24184075	24184165	55868619	55868752	-	-	AC092279.1	AC015845.1	24184079	55868752	ENSG00000251948|	ENSG00000244466|	breast_cancer	SRR064286,SRR064440,	breast_cancer,	NO_KINASE																
0.0002	5094	SRR064440	defuse	9	529	19	X	24184075	24184165	31132808	33357558	-	-	AC092279.1	DMD	24184164	32777977	ENSG00000251948|	ENSG00000198947|	breast_cancer	SRR064438,SRR064440,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000288447,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000288447, 	-1:ENST00000288447, 	APPPPPRKTCICLKHKIQ*:UnSpec-ENST00000288447, 	-1:UnSpec, 	Intron:ENST00000288447, 	Intergenic:UnSpec, 	CDS:ENST00000288447, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000288447, 	DOMAIN_UNK:ENST00000288447, 
0.0002	5095	SRR064440	defuse	6	13	20	20	47662838	47713489	47984946	48099184	+	-	CSE1L	KCNB1	47688990	47956857	ENSG00000124207|	ENSG00000158445|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000262982,	UnSpec,	UnSpec 	1:ENST00000262982, 	312:ENST00000262982, 	-1:UnSpec, 	-1:UnSpec, 	MELSDANLQTLTEYLKKTLDPDPAIRRPAEKFLESVEGNQNYPLLLLTLLEKSQDNVIKVCASVTFKNYIKRNWRIVEDEPNKICEADRVAIKANIVHLMLSSPEQIQKQLSDAISIIGREDFPQKWPDLLTEMVNRFQSGDFHVINGVLRTAHSLFKRYRHEFKSNELWTEIKLVLDAFALPLTNLFKATIELCSTHANDASALRILFSSLILISKLFYSLNFQDLPEFFEDNMETWMNNFHTLLTLDNKLLQTDDEEEAGLLELLKSQICDNAALYAQKYDEEFQRYLPRFVTAIWNLLVTTGQEVKYDL:ENST00000262982-UnSpec, 	9:ENST00000262982, 	-1:UnSpec, 	CDS:ENST00000262982, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000262982, 	DOMAIN_UNK:ENST00000262982, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5096	SRR064440	defuse	6	74	16	1	30064444	30081741	91726323	91870426	+	-	ALDOA	HFM1	30076016	91853148	ENSG00000149925|	ENSG00000162669|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	ENST00000338110,	ENST00000370421,	FrameShift 	-1:ENST00000338110, 	-1:ENST00000338110, 	-1:ENST00000370421, 	-1:ENST00000370421, 	MDASSSPWNPTPAPVSSPPLLLPIPAIVFIAVGIYLLLLGLVLLTRNCLLAQGCCADGSSPCRKQGSSGPPDCCWTCAEACNFPLPSPAHFLDACCPQPTRADWAPRCPRCCPLCDCACTCQLPDCQSLNCLCFEIKLR*:ENST00000338110-ENST00000370421, 	Intron:ENST00000338110, 	Intron:ENST00000370421, 	5UTR:ENST00000338110, 	CDS:ENST00000370421, 	DOMAIN_UNK:ENST00000338110, 	DOMAIN_UNK:ENST00000338110, 	NO_DOMAIN:ENST00000370421, 	NO_DOMAIN:ENST00000370421, 
0.1392	5097	SRR064440	defuse	5	9	2	7	61704984	61765761	101459240	101927250	-	+	XPO1	CUX1	61764916	101646601	ENSG00000082898|	ENSG00000160967|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	ENST00000401558,	ENST00000292535,	FrameShift 	-1:ENST00000401558, 	-1:ENST00000401558, 	-1:ENST00000292535, 	-1:ENST00000292535, 	MTIKGSYFLAAQKVTRAGLECQPCIHCLLYCKAAWN*:ENST00000401558-ENST00000292535, 	1:ENST00000401558, 	Intron:ENST00000292535, 	5UTR:ENST00000401558, 	CDS:ENST00000292535, 	DOMAIN_UNK:ENST00000401558, 	DOMAIN_UNK:ENST00000401558, 	NO_DOMAIN:ENST00000292535, 	NO_DOMAIN:ENST00000292535, 
0.0003	5098	SRR064440	defuse	8	1	18	2	45357922	45457515	132905164	133015542	-	-	SMAD2	ANKRD30BL	45379808	133012936	ENSG00000175387|	ENSG00000163046|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	ENST00000262160,	UnSpec,	FrameShift 	1:ENST00000262160, 	4117:ENST00000262160, 	-1:UnSpec, 	-1:UnSpec, 	MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKTGRLDELEKAITTQNCNTKCVTIPSTCSEIWGLSTPNTIDQWDTTGLYSFSEQTRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELKAIENCEYAFNLKKDEVCVNPYHYQRVETPVLPPVLVPRHTEILTELPPLDDYTHSIPENTNFPAGIEPQSNYIPETPPPGYISEDGETSDQQLNQSMDTGKKNVFENSSVIRYTFLVLFEIHKRCYS*:ENST00000262160-UnSpec, 	Intron:ENST00000262160, 	-1:UnSpec, 	CDS:ENST00000262160, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000262160, 	DOMAIN_UNK:ENST00000262160, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5099	SRR064440	defuse	13	613	2	5	132905164	133015542	174346085	174422516	-	-	ANKRD30BL	CTC-281M20.1	133012108	174541752	ENSG00000163046|	ENSG00000204754|	breast_cancer	SRR064437,SRR064440,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE																
0.0004	5100	SRR064440	defuse	21	55	8	17	125500726	125551699	38060848	38077313	-	-	TATDN1	GSDMB	125551266	38062238	ENSG00000147687|	ENSG00000073605|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776,	ENST00000520542,ENST00000394175,ENST00000360317,ENST00000354894,ENST00000394179,ENST00000418519,ENST00000309481,	FrameShift 	1:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	7:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	-1:ENST00000520542,ENST00000394175,ENST00000360317,ENST00000354894,ENST00000394179,ENST00000418519,ENST00000309481, 	-1:ENST00000520542,ENST00000394175,ENST00000360317,ENST00000354894,ENST00000394179,ENST00000418519,ENST00000309481, 	MSRFKFIGI*:ENST00000519776-ENST00000394175,ENST00000276692-ENST00000394179,ENST00000276692-ENST00000360317,ENST00000522927-ENST00000394175,ENST00000520321-ENST00000309481,ENST00000522310-ENST00000418519,ENST00000522310-ENST00000354894,ENST00000520321-ENST00000394179,ENST00000519776-ENST00000394179,ENST00000519776-ENST00000520542,ENST00000520321-ENST00000394175,ENST00000519776-ENST00000360317,ENST00000523214-ENST00000354894,ENST00000519776-ENST00000354894,ENST00000523214-ENST00000418519,ENST00000523214-ENST00000394179,ENST00000522310-ENST00000520542,ENST00000276692-ENST00000520542,ENST00000520321-ENST00000354894,ENST00000519776-ENST00000418519,ENST00000276692-ENST00000354894,ENST00000522927-ENST00000360317,ENST00000522927-ENST00000418519,ENST00000520321-ENST00000520542,ENST00000522310-ENST00000394175,ENST00000523214-ENST00000360317,ENST00000522310-ENST00000309481,ENST00000276692-ENST00000309481,ENST00000522927-ENST00000354894,ENST00000523214-ENST00000394175,ENST00000522927-ENST00000520542,ENST00000522927-ENST00000394179,ENST00000520321-ENST00000360317,ENST00000523214-ENST00000520542,ENST00000519776-ENST00000309481,ENST00000522310-ENST00000360317,ENST00000522927-ENST00000309481,ENST00000276692-ENST00000418519,ENST00000276692-ENST00000394175,ENST00000520321-ENST00000418519,ENST00000522310-ENST00000394179,ENST00000523214-ENST00000309481, 	1:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	6:ENST00000394175, 8:ENST00000520542,ENST00000394179,ENST00000309481, 7:ENST00000360317,ENST00000354894, 9:ENST00000418519, 	CDS:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	CDS:ENST00000520542,ENST00000394175,ENST00000360317,ENST00000354894,ENST00000394179,ENST00000418519,ENST00000309481, 	NO_DOMAIN:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	NO_DOMAIN:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	NO_DOMAIN:ENST00000520542,ENST00000394175,ENST00000360317,ENST00000354894,ENST00000394179,ENST00000418519,ENST00000309481, 	NO_DOMAIN:ENST00000520542,ENST00000394175,ENST00000360317,ENST00000354894,ENST00000394179,ENST00000418519,ENST00000309481, 
0.0002	5101	SRR064440	defuse	6	4	15	2	41576203	41601901	173020757	173020848	+	-	AC012652.1	snoU13.143	41577548	173030036	ENSG00000247556|	ENSG00000238572|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE																
0.0002	5102	SRR064440	defuse	40	11	12	9	34372314	34372611	79186649	79186950	-	+	AC140847.1	AL161626.1	34372509	79186656	ENSG00000243092|	ENSG00000241781|	breast_cancer	SRR064287,SRR064438,SRR064440,	breast_cancer,	NO_KINASE																
0.9932	5103	SRR064440	defuse	5	3	5	5	139781399	140099052	141232938	141258811	+	-	ANKHD1	PCDH1	139825560	141234001	ENSG00000131503|	ENSG00000156453|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000394723,ENST00000297183,ENST00000360839,ENST00000253810,ENST00000235510,	ENST00000287008,	InFrame 	1:ENST00000394723,ENST00000297183,ENST00000360839,ENST00000253810,ENST00000235510, 	382:ENST00000394723,ENST00000297183,ENST00000360839,ENST00000253810,ENST00000235510, 	1107:ENST00000287008, 	1237:ENST00000287008, 	MLTDSGGGGTSFEEDLDSVAPRSAPAGASEPPPPGGVGLGIRTVRLFGEAGPASGVGSSGGGGSGSGTGGGDAALDFKLAAAVLRTGGGGGASGSDEDEVSEVESFILDQEDLDNPVLKTTSEIFLSSTAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMKAENSHNAGQVDTRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAASSGGYLDIVKLLLLHDADVNSQSATGNTALTYACAGGFVDIVKVLLNEGANIEDHNENGHTPLMEAASAGHVEVARVLLDHGAGINTHSNEFKESALTLACYKDLRPLPDVAMTGTCTRECSEFGHSDTCWMPGQSSPSRRTKSSALKLSTFVPYQDRGGQEPAGAGSPSPPEDRNTKTAPVRLLPSYSAFSHSSHDSCKDSATLEEIPLTQTSDFPPAATPASAQTAKREIYL:ENST00000394723-ENST00000287008,ENST00000235510-ENST00000287008,ENST00000253810-ENST00000287008,ENST00000360839-ENST00000287008,ENST00000297183-ENST00000287008, 	6:ENST00000394723,ENST00000297183,ENST00000360839,ENST00000253810,ENST00000235510, 	5:ENST00000287008, 	CDS:ENST00000394723,ENST00000297183,ENST00000360839,ENST00000253810,ENST00000235510, 	CDS:ENST00000287008, 	Domain=KH;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50084,:ENST00000297183, NO_DOMAIN:ENST00000253810,ENST00000235510, Repeat=ANK 1,Repeat=ANK 2,Repeat=ANK 3,Repeat=ANK 4,Repeat=ANK 5,Repeat=ANK 6,:ENST00000394723,ENST00000360839, 	NO_DOMAIN:ENST00000297183,ENST00000253810,ENST00000235510, Repeat=ANK 7,Repeat=ANK 8,Repeat=ANK 9,Repeat=ANK 10,Repeat=ANK 11,Repeat=ANK 12,Repeat=ANK 13,Repeat=ANK 14,Repeat=ANK 15,Repeat=ANK 16,Repeat=ANK 17,Repeat=ANK 18,Repeat=ANK 19,Repeat=ANK 20,Repeat=ANK 21,Repeat=ANK 22,Repeat=ANK 23,Repeat=ANK 24,Repeat=ANK 25,Domain=KH;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00117,:ENST00000394723,ENST00000360839, 	NO_DOMAIN:ENST00000287008, 	Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=Cadherin 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00043,Domain=Cadherin 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00043,Domain=Cadherin 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00043,Domain=Cadherin 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00043,Domain=Cadherin 5;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00043,Domain=Cadherin 6;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00043,Domain=Cadherin 7;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00043,:ENST00000287008, 
0.0002	5104	SRR064440	defuse	5	231	19	5	24184075	24184165	134240596	134343649	-	+	AC092279.1	PCBD2	24184153	134260434	ENSG00000251948|	ENSG00000132570|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000254908,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000254908, 	-1:ENST00000254908, 	GDLVL*:UnSpec-ENST00000254908, 	-1:UnSpec, 	Intron:ENST00000254908, 	Intergenic:UnSpec, 	CDS:ENST00000254908, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000254908, 	DOMAIN_UNK:ENST00000254908, 
0.0002	5105	SRR064440	defuse	5	1006	19	2	24184075	24184165	230045488	230045666	-	-	AC092279.1	AC006368.1	24184077	230045634	ENSG00000251948|	ENSG00000241530|	breast_cancer	SRR064286,SRR064437,SRR064440,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	5106	SRR064440	defuse	20	58	19	5	24184075	24184165	71146740	71146942	-	+	AC092279.1	AC116340.1	24183757	71146921	ENSG00000251948|	ENSG00000239935|	breast_cancer	SRR064438,SRR064440,	breast_cancer,	NO_KINASE																
0.0002	5107	SRR064440	defuse	11	41	19	5	24184075	24184165	71146740	71146942	-	+	AC092279.1	AC116340.1	24184027	71146740	ENSG00000251948|	ENSG00000239935|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE																
0.9803	5108	SRR064440	defuse	7	5	3	3	3742498	4508965	37094117	37225180	-	-	SUMF1	LRRFIP2	4418014	37170640	ENSG00000144455|	ENSG00000093167|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000448413,ENST00000272902,	ENST00000421307,ENST00000336686,	InFrame 	1:ENST00000448413,ENST00000272902, 	338:ENST00000448413,ENST00000272902, 	30:ENST00000421307,ENST00000336686, 	721:ENST00000421307,ENST00000336686, 	MAAPALGLVCGRCPELGLVLLLLLLSLLCGAAGSQEAGTGAGAGSLAGSCGCGTPQRPGAHGSSAAAHRYSREANAPGPVPGERQLAHSKMVPIPAGVFTMGTDDPQIKQDGEAPARRVTIDAFYMDAYEVSNTEFEKFVNSTGYLTEAEKFGDSFVFEGMLSEQVKTNIQQAVAAAPWWLPVKGANWRHPEGPDSTILHRPDHPVLHVSWNDAVAYCTWAGKRLPTEAEWEYSCRGGLHNRLFPWGNKLQPKGQHYANIWQGEFPVTNTGEDGFQGTAPVDAFPPNGYGLYNIVGNAWEWTSDWWTVHHSVEETLNPKGPPSGKDRVKKGGSYMCHRAEARLAAKRAARAEARDIRMRELERQQKEYSLHSFDRKWGQIQKWLEDSERARYSHRSSHHRPYLGVEDALSIRSVGSHRYDMFKDRSSRLSSLNHSYSHSHGMKKRSSDSHKDLLSGLYFDQRNYSSLRHSKPTSAYYTRQSSSLYSDPLATYKSDRASPTANSGLLRSASLASLYNGGLYNPYGPRTPSECSYYSSRISSARSSPGFTNDDTASIVSSDRASRGRRESVVSAADYFSRSNRRGSVVSEVDDISIPDLSSLDEKSDKQYAENYTRPSSRNSASATTPLSGNSSRRGSGDTSSLIDPDTSLSELRDIYDLKDQIQDVEGRYMQGLKELKESLSEVEEKYKKAMVSNAQLDNEKNNLIYQVDTLKDVIEEQEEQMAEFYRENEEKSKELERQKHMCSVLQHKMEELKEGLRQRDELIEEKQRMQQKIDTMTKEVFDLQETLLWKDKKIGALEKQKEYIACLRNERDMLREELADLQETVKTGEKHGLVIIPDGTPNGDVSHEPVAGAITVVSQEAAQVLESAGEGPLDVRLRKLAGEKEELLSQIRKLKLQLEEERQKCSRNDGTVGDLAGLQNGSDLQFIEMQRDANRQISEYKFKLSKAEQDITTLEQSISRLEGQVLRYKTAAENAEKVEDELKAEKRKLQRELRTALDKIEEMEMTNSHLAKRLEKMKANRTALLAQQ:ENST00000448413-ENST00000421307,ENST00000448413-ENST00000336686,ENST00000272902-ENST00000421307,ENST00000272902-ENST00000336686, 	8:ENST00000448413,ENST00000272902, 	4:ENST00000421307, 3:ENST00000336686, 	CDS:ENST00000448413,ENST00000272902, 	CDS:ENST00000421307,ENST00000336686, 	Domain=FGE-sulfatase;Ontology_term=ECO:0000259;evidence=ECO:0000259|Pfam:PF03781,:ENST00000448413, NO_DOMAIN:ENST00000272902, 	NO_DOMAIN:ENST00000448413, Region=Interaction with sulfatases,:ENST00000272902, 	NO_DOMAIN:ENST00000421307, Region=DVL3-binding,:ENST00000336686, 	NO_DOMAIN:ENST00000421307,ENST00000336686, 
0.0003	5109	SRR064440	defuse	5	4	10	13	13685706	14504141	22202552	22203154	-	-	FRMD4A	RP11-271B5.1	13844033	22202801	ENSG00000151474|	ENSG00000226525|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	ENST00000342409,	UnSpec,	FrameShift 	1:ENST00000342409, 	3011:ENST00000342409, 	-1:UnSpec, 	-1:UnSpec, 	MVVQAAVAPNRSQRLLLKIPYGSLRRRSVERMTEGRRCQVHLLDDRKLELLVQPKLLAKELLDLVASHFNLKEKEYFGIAFTDET*:ENST00000342409-UnSpec, 	Intron:ENST00000342409, 	-1:UnSpec, 	CDS:ENST00000342409, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000342409, 	DOMAIN_UNK:ENST00000342409, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0003	5110	SRR064440	defuse	6	11048	17	8	33474836	33516364	136754586	136754738	+	-	UNC45B	U1.10	33478131	136786084	ENSG00000141161|	ENSG00000199652|	breast_cancer	SRR064287,SRR064438,SRR064440,	breast_cancer,	NO_KINASE	ENST00000268876,	UnSpec,	FrameShift 	1:ENST00000268876, 	423:ENST00000268876, 	-1:UnSpec, 	-1:UnSpec, 	MAEVEAVQLKEEGNRHFQLQDYKAATNSYSQALKLTKDKALLATLYRNRAACGLKTESYVQAASDASRAIDINSSDIKALYRRCQALEHLGKLDQAFKDVQRCATLEPRNQNFQEMLRRLNTSIQEKVSWASSHNPWLPSPSLHS*:ENST00000268876-UnSpec, 	Intron:ENST00000268876, 	-1:UnSpec, 	CDS:ENST00000268876, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000268876, 	DOMAIN_UNK:ENST00000268876, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5111	SRR064440	defuse	6	108	19	4	36066627	36066721	70296579	70296753	+	-	AD000090.1	AC108078.1	36066571	70296733	ENSG00000252666|	ENSG00000243185|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE																
0.0002	5112	SRR064440	defuse	16	3711	22	17	21271714	21308037	33474836	33516364	+	+	CRKL	UNC45B	21265412	33478113	ENSG00000099942|	ENSG00000141161|	breast_cancer	SRR064438,SRR064440,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000268876,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000268876, 	-1:ENST00000268876, 	FRTPHFPRPTAGRGFGAGLFPVHSPLLRESWLVSFPPLTNMLKFSGSPRLI*:UnSpec-ENST00000268876, 	-1:UnSpec, 	Intron:ENST00000268876, 	Intergenic:UnSpec, 	CDS:ENST00000268876, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000268876, 	DOMAIN_UNK:ENST00000268876, 
0.0003	5113	SRR064440	defuse	5	1	4	1	140586922	140661899	226969202	226969442	+	+	MGST2	RPS27P5	140619086	227001863	ENSG00000085871|	ENSG00000238183|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	ENST00000265498,	UnSpec,	FrameShift 	1:ENST00000265498, 	964:ENST00000265498, 	-1:UnSpec, 	-1:UnSpec, 	MAGNSILLAAVSILSACQQSYFALQVGKARLKYKVTPPAVTGSPEFERVFRAQQNCVEFYPIFIITLWMAGWYFNQGNVKIQSTVF*:ENST00000265498-UnSpec, 	Intron:ENST00000265498, 	-1:UnSpec, 	CDS:ENST00000265498, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000265498, 	DOMAIN_UNK:ENST00000265498, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5114	SRR064440	defuse	6	5	5	2	71146740	71146942	230045488	230045666	+	-	AC116340.1	AC006368.1	71146839	230045490	ENSG00000239935|	ENSG00000241530|	breast_cancer	SRR064437,SRR064440,	breast_cancer,normal_tissue,	NO_KINASE																
0.0004	5115	SRR064440	defuse	39	4750	17	11	33474836	33516364	83166055	85338966	+	-	UNC45B	DLG2	33478117	85195042	ENSG00000141161|	ENSG00000150672|	breast_cancer	SRR064286,SRR064287,SRR064438,SRR064440,	breast_cancer,	NO_KINASE	ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570,	ENST00000376104,	FrameShift 	1:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	418:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	-1:ENST00000376104, 	-1:ENST00000376104, 	MAEVEAVQLKEEGNRHFQLQDYKAATNSYSQALKLTKDKALLATLYRNRAACGLKTESYVQAASDASRAIDINSSDIKALYRRCQALEHLGKLDQAFKDVQRCATLEPRNQNFQEMLRRLNTSIQEKVSWASSHNPWLPSPSLHS*:ENST00000268876-ENST00000376104,ENST00000433649-ENST00000376104,ENST00000378449-ENST00000376104,ENST00000394570-ENST00000376104, 	Intron:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	Intron:ENST00000376104, 	CDS:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	CDS:ENST00000376104, 	NO_DOMAIN:ENST00000378449,ENST00000433649,ENST00000268876, Repeat=TPR 1,Repeat=TPR 2,Repeat=TPR 3,Repeat=ARM 1,Repeat=ARM 2,:ENST00000394570, 	NO_DOMAIN:ENST00000378449,ENST00000433649, Repeat=ARM 3,:ENST00000394570, Repeat=TPR 1,Repeat=TPR 2,Repeat=TPR 3,Repeat=ARM 1,Repeat=ARM 2,Repeat=ARM 3,:ENST00000268876, 	NO_DOMAIN:ENST00000376104, 	Domain=PDZ 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=PDZ 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=PDZ 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=SH3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00192,Domain=Guanylate kinase-like;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00100,:ENST00000376104, 
0.0002	5116	SRR064440	defuse	61	376	22	17	21271714	21308037	33474836	33516364	+	+	CRKL	UNC45B	21265469	33478487	ENSG00000099942|	ENSG00000141161|	breast_cancer	SRR064438,SRR064440,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000268876,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000268876, 	-1:ENST00000268876, 	M*:UnSpec-ENST00000268876, 	-1:UnSpec, 	Intron:ENST00000268876, 	Intergenic:UnSpec, 	CDS:ENST00000268876, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000268876, 	DOMAIN_UNK:ENST00000268876, 
0.0002	5117	SRR064440	defuse	19	193	19	2	24184075	24184165	133038647	133038738	-	-	AC092279.1	AC097532.1	24184079	133038650	ENSG00000251948|	ENSG00000252318|	breast_cancer	SRR064438,SRR064440,	breast_cancer,	NO_KINASE																
0.0002	5118	SRR064440	defuse	8	127	5	2	71146740	71146942	133038647	133038738	+	-	AC116340.1	AC097532.1	71146938	133038267	ENSG00000239935|	ENSG00000252318|	breast_cancer	SRR064438,SRR064440,SRR064441,	breast_cancer,	NO_KINASE																
0.5700	5119	SRR064440	defuse	22	31	7	8	5566782	5603415	145051321	145086940	-	-	ACTB	PARP10	5567255	145057984	ENSG00000075624|	ENSG00000178685|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	ENST00000331789,	ENST00000313028,	InFrame 	1:ENST00000331789, 	375:ENST00000331789, 	-1:ENST00000313028, 	-1:ENST00000313028, 	MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF:ENST00000331789-ENST00000313028, 	Intron:ENST00000331789, 	Intron:ENST00000313028, 	3UTR:ENST00000331789, 	CDS:ENST00000313028, 	NO_DOMAIN:ENST00000331789, 	NO_DOMAIN:ENST00000331789, 	DOMAIN_UNK:ENST00000313028, 	DOMAIN_UNK:ENST00000313028, 
0.0003	5120	SRR064440	defuse	5	16	1	X	91726323	91870426	108297361	108297792	-	-	HFM1	RN28S1	91853148	108297823	ENSG00000162669|	ENSG00000226958|	breast_cancer	SRR064438,SRR064440,	breast_cancer,	NO_KINASE	ENST00000370421,	UnSpec,	FrameShift 	1:ENST00000370421, 	2332:ENST00000370421, 	-1:UnSpec, 	-1:UnSpec, 	MLKSNDCLFSLENLFFEKPDEVENHPDNEKSLDWFLPPAPLISEIPDTQELEEELESHKLLGQEKRPKMLTSNLKITNEDTNYISLTQKFQFAFPSDKYEQDDLNLEGVGNNDLSHIAGKLTYASQKYKNHIGTEIAPEKSVPDDTKLVNFAEDKGESTSVFRKR*:ENST00000370421-UnSpec, 	Intron:ENST00000370421, 	-1:UnSpec, 	CDS:ENST00000370421, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5121	SRR064440	defuse	6	7	5	1	71146740	71146942	108113461	108113552	+	-	AC116340.1	AC114491.2	71146792	108113430	ENSG00000239935|	ENSG00000252194|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE																
0.5414	5122	SRR064440	defuse	7	17	8	17	125500726	125551699	38060848	38077313	-	-	TATDN1	GSDMB	125551266	38062524	ENSG00000147687|	ENSG00000073605|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776,	ENST00000360317,ENST00000394179,ENST00000418519,ENST00000309481,	InFrame 	1:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	7:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	243:ENST00000418519, 238:ENST00000360317,ENST00000394179, 230:ENST00000309481, 	403:ENST00000309481, 416:ENST00000418519, 411:ENST00000360317,ENST00000394179, 	MSRFKFIGKSLGSEDSRNMKEKLEDMESVLKDLTEEKRKDVLNSLAKCLGKEDIRQDLEQRVSEVLISGELHMEDPDKPLLSSLFNAAGVLVEARAKAILDFLDALLELSEEQQFVAEALEKGTLPLLKDQVKSVMEQNWDELASSPPDMDYDPEARILCALYVVVSILLELAEGPTSVSS:ENST00000522927-ENST00000418519,ENST00000276692-ENST00000394179,ENST00000276692-ENST00000418519,ENST00000276692-ENST00000360317,ENST00000520321-ENST00000418519,ENST00000276692-ENST00000309481,ENST00000522310-ENST00000418519,ENST00000523214-ENST00000418519,ENST00000519776-ENST00000418519, 	1:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	8:ENST00000418519, 6:ENST00000360317, 7:ENST00000394179,ENST00000309481, 	CDS:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	CDS:ENST00000360317,ENST00000394179,ENST00000418519,ENST00000309481, 	NO_DOMAIN:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	NO_DOMAIN:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	NO_DOMAIN:ENST00000360317,ENST00000394179,ENST00000418519,ENST00000309481, 	NO_DOMAIN:ENST00000360317,ENST00000394179,ENST00000418519,ENST00000309481, 
0.0002	5123	SRR064440	defuse	21	38	12	16	20704358	20704522	33961052	33962503	+	-	AC112777.1	NCRNA00273	20704492	33963913	ENSG00000240831|	ENSG00000256642|	breast_cancer	SRR064286,SRR064287,SRR064438,SRR064440,	breast_cancer,	NO_KINASE																
0.4661	5124	SRR064440	defuse	5	16	17	8	76670130	76778379	117654369	117779164	-	-	CYTH1	EIF3H	76778284	117768258	ENSG00000108669|	ENSG00000147677|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000262763,	ENST00000276682,	InFrame 	1:ENST00000262763, 	7:ENST00000262763, 	1:ENST00000276682, 	366:ENST00000276682, 	MEEDDSYDHSIGKRSKMYSRHAQRIPPGKKMASRKEGTGSTATSSSSTAGAAGKGKGKGGSGDSAVKQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKANITFEYMFEEVPIVIKNSHLINVLMWELEKKSAVADKHELLSLASSNHLGKNLQLLMDRVDEMSQDIVKYNTYMRNTSKQQQQKHQYQQRRQQENMQRQSRGEPPLPEEDLSKLFKPPQPPARMDSLLIAGQINTYCQNIKEFTAQNLGKLFMAQALQEYNN:ENST00000262763-ENST00000276682, 	1:ENST00000262763, 	-1:ENST00000276682, 	CDS:ENST00000262763, 	5UTR:ENST00000276682, 	DOMAIN_UNK:ENST00000262763, 	DOMAIN_UNK:ENST00000262763, 	DOMAIN_UNK:ENST00000276682, 	DOMAIN_UNK:ENST00000276682, 
0.0004	5125	SRR064440	defuse	12	25	8	17	687651	1087777	7760005	7761172	+	-	CTD-3212A4.1	LSMD1	923661	7760515	ENSG00000237647|	ENSG00000183011|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000333775,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000333775, 	-1:ENST00000333775, 	IRTESARTRRLSAPDSS*:UnSpec-ENST00000333775, 	-1:UnSpec, 	1:ENST00000333775, 	Intergenic:UnSpec, 	CDS:ENST00000333775, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000333775, 	DOMAIN_UNK:ENST00000333775, 
0.3124	5126	SRR064440	defuse	6	9	17	17	37894187	37903545	37885409	37887040	+	-	GRB7	C17orf37	37894381	37886510	ENSG00000141738|	ENSG00000141741|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	ENST00000309156,	ENST00000394231,	FrameShift 	-1:ENST00000309156, 	-1:ENST00000309156, 	-1:ENST00000394231, 	-1:ENST00000394231, 	M*:ENST00000309156-ENST00000394231, 	1:ENST00000309156, 	2:ENST00000394231, 	5UTR:ENST00000309156, 	CDS:ENST00000394231, 	DOMAIN_UNK:ENST00000309156, 	DOMAIN_UNK:ENST00000309156, 	NO_DOMAIN:ENST00000394231, 	NO_DOMAIN:ENST00000394231, 
0.0004	5127	SRR064440	defuse	47	202	8	17	125500726	125551699	38060848	38077313	-	-	TATDN1	GSDMB	125551266	38066177	ENSG00000147687|	ENSG00000073605|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776,	ENST00000520542,ENST00000523371,ENST00000394179,ENST00000354894,ENST00000360317,ENST00000394175,ENST00000418519,ENST00000524039,ENST00000437352,ENST00000309481,	FrameShift 	1:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	7:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	-1:ENST00000520542,ENST00000523371,ENST00000394179,ENST00000354894,ENST00000360317,ENST00000394175,ENST00000418519,ENST00000524039,ENST00000437352,ENST00000309481, 	-1:ENST00000520542,ENST00000523371,ENST00000394179,ENST00000354894,ENST00000360317,ENST00000394175,ENST00000418519,ENST00000524039,ENST00000437352,ENST00000309481, 	MSRFKFIGS*:ENST00000519776-ENST00000394175,ENST00000520321-ENST00000523371,ENST00000276692-ENST00000394179,ENST00000276692-ENST00000360317,ENST00000522927-ENST00000394175,ENST00000276692-ENST00000437352,ENST00000520321-ENST00000309481,ENST00000522310-ENST00000524039,ENST00000522310-ENST00000418519,ENST00000276692-ENST00000524039,ENST00000522310-ENST00000437352,ENST00000522310-ENST00000354894,ENST00000523214-ENST00000524039,ENST00000520321-ENST00000394179,ENST00000519776-ENST00000520542,ENST00000519776-ENST00000394179,ENST00000522310-ENST00000523371,ENST00000520321-ENST00000394175,ENST00000520321-ENST00000437352,ENST00000519776-ENST00000524039,ENST00000519776-ENST00000360317,ENST00000523214-ENST00000354894,ENST00000519776-ENST00000354894,ENST00000523214-ENST00000418519,ENST00000523214-ENST00000394179,ENST00000522310-ENST00000520542,ENST00000276692-ENST00000520542,ENST00000520321-ENST00000354894,ENST00000519776-ENST00000418519,ENST00000522927-ENST00000360317,ENST00000276692-ENST00000354894,ENST00000522927-ENST00000523371,ENST00000522927-ENST00000418519,ENST00000520321-ENST00000520542,ENST00000522310-ENST00000394175,ENST00000523214-ENST00000437352,ENST00000519776-ENST00000437352,ENST00000523214-ENST00000360317,ENST00000522310-ENST00000309481,ENST00000276692-ENST00000309481,ENST00000523214-ENST00000523371,ENST00000522927-ENST00000354894,ENST00000523214-ENST00000394175,ENST00000522927-ENST00000520542,ENST00000522927-ENST00000437352,ENST00000522927-ENST00000394179,ENST00000520321-ENST00000360317,ENST00000523214-ENST00000520542,ENST00000519776-ENST00000309481,ENST00000522310-ENST00000360317,ENST00000522927-ENST00000524039,ENST00000522927-ENST00000309481,ENST00000276692-ENST00000418519,ENST00000276692-ENST00000394175,ENST00000522310-ENST00000394179,ENST00000520321-ENST00000418519,ENST00000276692-ENST00000523371,ENST00000523214-ENST00000309481,ENST00000520321-ENST00000524039,ENST00000519776-ENST00000523371, 	1:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	4:ENST00000520542,ENST00000354894,ENST00000394179,ENST00000418519,ENST00000437352,ENST00000309481, 3:ENST00000394175,ENST00000360317,ENST00000523371,ENST00000524039, 	CDS:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	CDS:ENST00000520542,ENST00000523371,ENST00000394179,ENST00000354894,ENST00000360317,ENST00000394175,ENST00000418519,ENST00000524039,ENST00000437352,ENST00000309481, 	NO_DOMAIN:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	NO_DOMAIN:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	NO_DOMAIN:ENST00000520542,ENST00000523371,ENST00000394179,ENST00000354894,ENST00000360317,ENST00000394175,ENST00000418519,ENST00000524039,ENST00000437352,ENST00000309481, 	NO_DOMAIN:ENST00000520542,ENST00000523371,ENST00000394179,ENST00000354894,ENST00000360317,ENST00000394175,ENST00000418519,ENST00000524039,ENST00000437352,ENST00000309481, 
0.0002	5128	SRR064440	defuse	5	9	8	8	71485677	71520622	86756718	86758745	-	-	TRAM1	REXO1L2P	71495404	86764318	ENSG00000067167|	ENSG00000255940|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE	ENST00000262213,	UnSpec,	UnSpec 	1:ENST00000262213, 	348:ENST00000262213, 	-1:UnSpec, 	-1:UnSpec, 	MAIRKKSTKSPPVLSHEFVLQNHADIVSCVAMVFLLGLMFEITAKASIIFVTLQYNVTLPATEEQATESVSLYYYGIKDLATVFFYMLVAIIIHAVIQEYMLDKINRRMHFSKTKHSKFNESGQLSAFYLFACVWGTFILISENYISDPTILWRAYPHNLMTFQMKFFYISQLAYWLHAFPELYFQKTKKEDIPRQLVYIGLYLFHIAGAYLLNLNHLGLVLLVLHYFVEFLFHISRLFYFSNEKYQKGFSLWAVLFVLGRLLTLILSVLTVGFGLARAENQKLDFSTGNFNVLAVRIAVLASICVTQAFMMWKFINFQLRRWREHSAFQAPAVKKKPTVTKGRSSKK:ENST00000262213-UnSpec, 	10:ENST00000262213, 	-1:UnSpec, 	CDS:ENST00000262213, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000262213, 	DOMAIN_UNK:ENST00000262213, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0004	5129	SRR064441	defuse	5	3	5	1	170814120	170838141	566454	567996	+	+	NPM1	RP5-857K21.6	170827160	566984	ENSG00000181163|	ENSG00000237973|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000296930,	UnSpec,	FrameShift 	1:ENST00000296930, 	2567:ENST00000296930, 	-1:UnSpec, 	-1:UnSpec, 	MEDSMDMDMSPLRPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVEEDAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVKLAADEDDDDDDEEDDDEE*:ENST00000296930-UnSpec, 	7:ENST00000296930, 	-1:UnSpec, 	CDS:ENST00000296930, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000296930, 	DOMAIN_UNK:ENST00000296930, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5130	SRR064441	defuse	6	1	17	15	39679869	39684560	94774767	95027180	-	+	KRT19	MCTP2	39681476	94708890	ENSG00000171345|	ENSG00000140563|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000361566,	UnSpec,	UnSpec 	1:ENST00000361566, 	156:ENST00000361566, 	-1:UnSpec, 	-1:UnSpec, 	MTSYSYRQSSATSSFGGLGGGSVRFGPGVAFRAPSIHGGSGGRGVSVSSARFVSSSSSGAYGGGYGGVLTASDGLLAGNEKLTMQNLNDRLASYLDKVRALEAANGELEVKIRDWYQKQGPGPSRDYSHYYTTIQDLRDKILGATIENSRIVLQID:ENST00000361566-UnSpec, 	2:ENST00000361566, 	-1:UnSpec, 	CDS:ENST00000361566, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000361566, 	DOMAIN_UNK:ENST00000361566, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.9949	5131	SRR064441	defuse	5	1	1	7	1321091	1334708	99686577	99689823	-	+	CCNL2	COPS6	1334584	99686636	ENSG00000221978|	ENSG00000168090|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000425335,ENST00000400809,ENST00000408918,ENST00000425598,ENST00000496007,ENST00000488340,ENST00000481223,	ENST00000303904,	InFrame 	1:ENST00000425335,ENST00000400809,ENST00000408918,ENST00000425598,ENST00000496007,ENST00000488340,ENST00000481223, 	34:ENST00000425335,ENST00000400809,ENST00000408918,ENST00000425598,ENST00000496007,ENST00000488340,ENST00000481223, 	8:ENST00000303904, 	327:ENST00000303904, 	MAAAAAAAGAAGSAAPAAAAGAPGSGGAPSGSQGAAATNGTGGSSGMEVDAAVVPSVMACGVTGSVSVALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSHTVEEKIIIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVFESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKFKTDFYDQCNDVGLMAYLGTITKTCNTMNQFVNKFNVLYDRQGIGRRMRGLFF:ENST00000488340-ENST00000303904,ENST00000481223-ENST00000303904,ENST00000400809-ENST00000303904,ENST00000496007-ENST00000303904,ENST00000425598-ENST00000303904,ENST00000425335-ENST00000303904,ENST00000408918-ENST00000303904, 	1:ENST00000425335,ENST00000400809,ENST00000408918,ENST00000425598,ENST00000496007,ENST00000488340,ENST00000481223, 	1:ENST00000303904, 	CDS:ENST00000425335,ENST00000400809,ENST00000408918,ENST00000425598,ENST00000496007,ENST00000488340,ENST00000481223, 	CDS:ENST00000303904, 	NO_DOMAIN:ENST00000425335,ENST00000400809,ENST00000408918,ENST00000425598,ENST00000496007,ENST00000488340,ENST00000481223, 	NO_DOMAIN:ENST00000425335,ENST00000425598,ENST00000496007, Region=Cyclin-like 1,Region=Cyclin-like 2,Region=RS,:ENST00000400809,ENST00000408918,ENST00000488340,ENST00000481223, 	Domain=MPN,Region=Interaction with Vpr,:ENST00000303904, 	NO_DOMAIN:ENST00000303904, 
0.0003	5132	SRR064441	defuse	5	5	5	5	134240596	134343649	177482605	177483195	+	+	PCBD2	RP11-889L3.1	134261149	177482748	ENSG00000132570|	ENSG00000218227|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000254908,	UnSpec,	FrameShift 	1:ENST00000254908, 	5069:ENST00000254908, 	-1:UnSpec, 	-1:UnSpec, 	MAAVLGALGATRRLLAALRGQSLGLAAMSSGTHRLTAEERNQAILDLKAAGWSELSERDAIYKEFSFHNFNQVIVINSC*:ENST00000254908-UnSpec, 	Intron:ENST00000254908, 	-1:UnSpec, 	CDS:ENST00000254908, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000254908, 	DOMAIN_UNK:ENST00000254908, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5133	SRR064441	defuse	12	1	X	3	70503042	70521018	135867764	135916083	+	-	NONO	MSL2	70510529	135888348	ENSG00000147140|	ENSG00000174579|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0306	5134	SRR064441	defuse	15	1	17	4	37844393	37884915	104177316	104374815	+	+	ERBB2	RP11-328K4.1	37883221	104227306	ENSG00000141736|	ENSG00000248740|	breast_cancer	SRR064441,	breast_cancer,	5p_KINASE	ENST00000269571,	UnSpec,	UnSpec 	1:ENST00000269571, 	1093:ENST00000269571, 	-1:UnSpec, 	-1:UnSpec, 	MELAALCRWGLLLALLPPGAASTQVCTGTDMKLRLPASPETHLDMLRHLYQGCQVVQGNLELTYLPTNASLSFLQDIQEVQGYVLIAHNQVRQVPLQRLRIVRGTQLFEDNYALAVLDNGDPLNNTTPVTGASPGGLRELQLRSLTEILKGGVLIQRNPQLCYQDTILWKDIFHKNNQLALTLIDTNRSRACHPCSPMCKGSRCWGESSEDCQSLTRTVCAGGCARCKGPLPTDCCHEQCAAGCTGPKHSDCLACLHFNHSGICELHCPALVTYNTDTFESMPNPEGRYTFGASCVTACPYNYLSTDVGSCTLVCPLHNQEVTAEDGTQRCEKCSKPCARVCYGLGMEHLREVRAVTSANIQEFAGCKKIFGSLAFLPESFDGDPASNTAPLQPEQLQVFETLEEITGYLYISAWPDSLPDLSVFQNLQVIRGRILHNGAYSLTLQGLGISWLGLRSLRELGSGLALIHHNTHLCFVHTVPWDQLFRNPHQALLHTANRPEDECVGEGLACHQLCARGHCWGPGPTQCVNCSQFLRGQECVEECRVLQGLPREYVNARHCLPCHPECQPQNGSVTCFGPEADQCVACAHYKDPPFCVARCPSGVKPDLSYMPIWKFPDEEGACQPCPINCTHSCVDLDDKGCPAEQRASPLTSIISAVVGILLVVVLGVVFGILIKRRQQKIRKYTMRRLLQETELVEPLTPSGAMPNQAQMRILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVSEFSRMARDPQRFVVIQVLGLCAPSLPVAKSTLLQRVGRRDESSMPGPSRKAACWAGEGPPSCLSFLHRMRTWAQPVPWTAPSTAHCWRTMTWGTWWMLRSIWYPSRASSVQTLPRALGA:ENST00000269571-UnSpec, 	25:ENST00000269571, 	-1:UnSpec, 	CDS:ENST00000269571, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000269571, 	DOMAIN_UNK:ENST00000269571, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0001	5135	SRR064441	defuse	6	1	2	3	1635659	1748624	152552736	152555841	-	+	PXDN	P2RY1	1636957	152545700	ENSG00000130508|	ENSG00000169860|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000252804,	UnSpec,	UnSpec 	0:ENST00000252804, 	0:ENST00000252804, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000252804-UnSpec, 	Intron:ENST00000252804, 	Intron:UnSpec, 	3UTR:ENST00000252804, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000252804, 	DOMAIN_UNK:ENST00000252804, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5136	SRR064441	defuse	5	1	9	9	139377947	139380518	139334549	139372141	+	-	C9orf163	SEC16A	139378921	139372139	ENSG00000196366|	ENSG00000148396|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	5137	SRR064441	defuse	6	10	1	2	566454	567996	132905164	133015542	+	-	RP5-857K21.6	ANKRD30BL	567098	133012886	ENSG00000237973|	ENSG00000163046|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0005	5138	SRR064441	defuse	10	3	17	8	76670130	76778379	117654369	117779164	-	-	CYTH1	EIF3H	76778284	117738411	ENSG00000108669|	ENSG00000147677|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000361101,ENST00000262763,ENST00000392457,ENST00000446868,ENST00000392453,	ENST00000521861,ENST00000276682,ENST00000411422,	FrameShift 	1:ENST00000361101,ENST00000262763,ENST00000392457,ENST00000446868,ENST00000392453, 	7:ENST00000361101,ENST00000262763,ENST00000392457,ENST00000446868,ENST00000392453, 	-1:ENST00000521861,ENST00000276682,ENST00000411422, 	-1:ENST00000521861,ENST00000276682,ENST00000411422, 	MEEDDSYGGIKDNQTLSRRRTRN*:ENST00000262763-ENST00000411422,ENST00000392453-ENST00000276682,ENST00000392453-ENST00000411422,ENST00000392457-ENST00000521861,ENST00000446868-ENST00000411422,ENST00000392457-ENST00000276682,ENST00000361101-ENST00000276682,ENST00000361101-ENST00000411422,ENST00000392453-ENST00000521861,ENST00000392457-ENST00000411422,ENST00000262763-ENST00000276682,ENST00000446868-ENST00000276682,ENST00000262763-ENST00000521861,ENST00000361101-ENST00000521861,ENST00000446868-ENST00000521861, 	1:ENST00000361101,ENST00000262763,ENST00000392457,ENST00000446868,ENST00000392453, 	4:ENST00000276682, 3:ENST00000411422, 2:ENST00000521861, 	CDS:ENST00000361101,ENST00000262763,ENST00000392457,ENST00000446868,ENST00000392453, 	CDS:ENST00000521861,ENST00000276682,ENST00000411422, 	NO_DOMAIN:ENST00000361101,ENST00000262763,ENST00000392457,ENST00000446868,ENST00000392453, 	Domain=SEC7;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00189,Domain=PH;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00145,Region=Phosphatidylinositol 3%2C4%2C5-trisphosphate binding;Ontology_term=ECO:0000250;evidence=ECO:0000250,Region=C-terminal autoinhibitory region;Ontology_term=ECO:0000250;evidence=ECO:0000250,:ENST00000361101,ENST00000446868, NO_DOMAIN:ENST00000262763,ENST00000392457,ENST00000392453, 	NO_DOMAIN:ENST00000521861,ENST00000276682,ENST00000411422, 	Domain=MPN (JAB/Mov34);Ontology_term=ECO:0000259;evidence=ECO:0000259|SMART:SM00232,:ENST00000276682, Domain=MPN;Ontology_term=ECO:0000255;evidence=ECO:0000255|HAMAP-Rule:MF_03007,:ENST00000521861, NO_DOMAIN:ENST00000411422, 
0.0002	5139	SRR064441	defuse	6	446	12	1	34372314	34372611	91726323	91870426	-	-	AC140847.1	HFM1	34372533	91853148	ENSG00000243092|	ENSG00000162669|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000370421,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000370421, 	-1:ENST00000370421, 	SGDSARWGV*:UnSpec-ENST00000370421, 	-1:UnSpec, 	Intron:ENST00000370421, 	Intergenic:UnSpec, 	CDS:ENST00000370421, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:ENST00000370421, 
0.0003	5140	SRR064441	defuse	18	8	18	2	45357922	45457515	132905164	133015542	-	-	SMAD2	ANKRD30BL	45379756	133012990	ENSG00000175387|	ENSG00000163046|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000262160,	UnSpec,	FrameShift 	1:ENST00000262160, 	4134:ENST00000262160, 	-1:UnSpec, 	-1:UnSpec, 	MSSILPFTPPVVKRLLGWKKSAGGSGGAGGGEQNGQEEKWCEKAVKSLVKKLKKTGRLDELEKAITTQNCNTKCVTIPSTCSEIWGLSTPNTIDQWDTTGLYSFSEQTRSLDGRLQVSHRKGLPHVIYCRLWRWPDLHSHHELKAIENCEYAFNLKKDEVCVNPYHYQRVETPVLPPVLVPRHTEILTELPPLDDYTHSIPENTNFPAGIEPQSNYIPETPPPGYISEDGETSDQQLNQSMDTGKKNVFENSSVIRYTFLVLFEIHKRCYS*:ENST00000262160-UnSpec, 	Intron:ENST00000262160, 	-1:UnSpec, 	CDS:ENST00000262160, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000262160, 	DOMAIN_UNK:ENST00000262160, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0003	5141	SRR064441	defuse	7	6	8	1	62413115	62627199	149514090	149514256	-	-	ASPH	U1.100	62491506	149514159	ENSG00000198363|	ENSG00000212544|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000379454,	UnSpec,	FrameShift 	1:ENST00000379454, 	2019:ENST00000379454, 	-1:UnSpec, 	-1:UnSpec, 	MAQRKNAKSSGNSSSSGSGSGSTSAGSSSPGARRETKHGGHKNGRKGGLSGTSFFTWFMVIALLGVWTSVAVVWFDLVDYEEVLGKLGIYDADGDGDFDVDDAKVLLGLKERSTSEPAVPPEEAEPHTEPEEQVPVEAEPQNIEDEAKEQIQSLLHEMVHAEHVEGEDLQQEDGPTGEPQQEDDEFLMATDVDDRFETLEPEVSHEETEHSYHVEETVSQDCNQDMEEMMSEQENPDSSEPVVEDERLHHDTDDVTYQVYEEQAVYEPLENEGIEITEVTAPPEDNPVEDSQVIVEEVSIFPVEEQQEVPPETNRKTDDPEQKAKVKKKKPKLLNKFDKTIKAELDAAEKLRKRVG*:ENST00000379454-UnSpec, 	Intron:ENST00000379454, 	-1:UnSpec, 	CDS:ENST00000379454, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000379454, 	DOMAIN_UNK:ENST00000379454, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5142	SRR064441	defuse	6	6	1	3	565020	566063	75263782	75264787	+	+	RP5-857K21.8	RP11-642N14.1	565833	75264285	ENSG00000225630|	ENSG00000213300|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0051	5143	SRR064441	defuse	39	20	19	7	571310	583492	105730949	105753022	+	-	BSG	SYPL1	583452	105741885	ENSG00000172270|	ENSG00000008282|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000333511,	ENST00000011473,	InFrame 	1:ENST00000333511, 	385:ENST00000333511, 	-1:ENST00000011473, 	-1:ENST00000011473, 	MAAALFVLLGFALLGTHGASGAAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDTCSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRVKWVRAQAVVLVLEPGTVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVRSHLAALWPFLGIVAEVLVLVTIIFIYEKRRKPEDVLDDDDAGSAPLKSSGQHQNDKGKNVRQRNSS:ENST00000333511-ENST00000011473, 	Intron:ENST00000333511, 	Intron:ENST00000011473, 	3UTR:ENST00000333511, 	CDS:ENST00000011473, 	Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=Ig-like C2-type,Domain=Ig-like V-type,:ENST00000333511, 	NO_DOMAIN:ENST00000333511, 	DOMAIN_UNK:ENST00000011473, 	DOMAIN_UNK:ENST00000011473, 
0.0002	5144	SRR064441	defuse	5	5	MT	MT	14149	14673	4470	5511	-	+	MT-ND6	MT-ND2	14450	5234	ENSG00000198695|	ENSG00000198763|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	5145	SRR064441	defuse	5	1	X	1	153759606	153775787	210477029	210477881	-	+	G6PD	RP4-667H12.4	153761224	210484476	ENSG00000160211|	ENSG00000233455|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000291567,	UnSpec,	UnSpec 	1:ENST00000291567, 	328:ENST00000291567, 	-1:UnSpec, 	-1:UnSpec, 	MAEQVALSRTQVCGILREELFQGDAFHQSDTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAGQYDDAASYQRLNSHMNALHLGSQANRLFYLALPPTVYEAVTKNIHESCMSQIGWNRIIVEKPFGRDLQSSDRLSNHISSLFREDQIYRIDHYLGKEMVQNLMVLRFANRIFGPIWNRDNIACVILTFKEPFGTEGRGGYFDEFGIIRDVMQNHLLQMLCLVAMEKPASTNSDDVRDEKVKVLKCISEVQANNVVLGQYVGNPDGEGEATKGYLDDPTV:ENST00000291567-UnSpec, 	9:ENST00000291567, 	-1:UnSpec, 	CDS:ENST00000291567, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000291567, 	DOMAIN_UNK:ENST00000291567, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5146	SRR064441	defuse	9	36	19	11	24184075	24184165	61159159	61166335	-	+	AC092279.1	TMEM216	24184150	61158751	ENSG00000251948|	ENSG00000187049|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0003	5147	SRR064441	defuse	10	4	2	19	27667238	27712656	5558178	5568045	-	-	IFT172	PLAC2	27699993	5567689	ENSG00000138002|	ENSG00000223573|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000260570,	UnSpec,	FrameShift 	1:ENST00000260570, 	472:ENST00000260570, 	-1:UnSpec, 	-1:UnSpec, 	MHLKHLRTLLSPQDGAAKVTCMAWSQNNAKFAVCTVDRVVLLYDEHGERRDKFSTKPADMKYGRKSYMVKGMAFSPDSTKIAIGQTDNIIYVYKIGEDWGDKKVICNKFIQTSAVTCLQWPAEYIIVFGLAEGKVRLANTKTNKSSTIYGTESYVVSLTTNCSGKGILSGHADGTIVRYFFDDEGSGESQGKLVNHPCPPYALAWATNSIVAAGCDRKIVAYGKEGHMLQTFDYSRDPQEREFTTAVSSPGGQSVVLGSYDRLRVFNWIPRRSIWEEAKPKEITNLYTITALAWKRDGSRLCVGTLCGGVEQFDCCLRRSIYKNKFELTYVGPSQVIVKNLSSGTRVVLKSHYGYEVEEVKILGKERYLVAHTSETLLLGDLNTNRLSEIAWQGSGGNEKYFFENENVCMIFNAGELTLVEYGNNDTLGSVRTEFMNPHLIR*:ENST00000260570-UnSpec, 	Intron:ENST00000260570, 	-1:UnSpec, 	CDS:ENST00000260570, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000260570, 	DOMAIN_UNK:ENST00000260570, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5148	SRR064441	defuse	7	45	20	19	21482033	21482606	24184075	24184165	+	-	GSTM3P1	AC092279.1	21480463	24184150	ENSG00000227693|	ENSG00000251948|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	5149	SRR064441	defuse	5	6	MT	MT	14149	14673	8366	8572	-	+	MT-ND6	J01415.25	14585	8385	ENSG00000198695|	ENSG00000228253|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.5414	5150	SRR064441	defuse	6	13	15	3	40327891	40331389	40498783	40506549	-	+	SRP14	RPL14	40328624	40503532	ENSG00000140319|	ENSG00000188846|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000267884,	ENST00000396203,ENST00000338970,	InFrame 	1:ENST00000267884, 	107:ENST00000267884, 	152:ENST00000396203,ENST00000338970, 	215:ENST00000396203,ENST00000338970, 	MVLLESEQFLTELTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRATDGKKKISTVVSSKEVNKFQMAYSNLLRANMDGLKKRDKKNKTKKTKAAAAAAAKVPAKKITAASKKAPAQKVPAQKATGQKAAPAPKAQKGQKAPAQKAPAPKASGKKA:ENST00000267884-ENST00000338970,ENST00000267884-ENST00000396203, 	5:ENST00000267884, 	6:ENST00000396203,ENST00000338970, 	CDS:ENST00000267884, 	CDS:ENST00000396203,ENST00000338970, 	NO_DOMAIN:ENST00000267884, 	NO_DOMAIN:ENST00000267884, 	Repeat=1-1,Repeat=1-2,Repeat=1-3,Repeat=1-4,Repeat=2-1,Repeat=2-2,Region=4 X 5 AA tandem repeats of Q-K-A-[PAS]-X,Region=2 X 3 AA tandem repeats of K-[GA]-Q,:ENST00000396203,ENST00000338970, 	NO_DOMAIN:ENST00000396203,ENST00000338970, 
0.0002	5151	SRR064441	defuse	11	39	5	2	71146740	71146942	133038647	133038738	+	-	AC116340.1	AC097532.1	71146938	133038267	ENSG00000239935|	ENSG00000252318|	breast_cancer	SRR064438,SRR064440,SRR064441,	breast_cancer,	NO_KINASE																
0.0002	5152	SRR064441	defuse	55	4513	2	5	132905164	133015542	174346085	174422516	-	-	ANKRD30BL	CTC-281M20.1	133012108	174541752	ENSG00000163046|	ENSG00000204754|	breast_cancer	SRR064437,SRR064440,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	5153	SRR064441	defuse	5	3	2	5	232318242	232348352	118309491	118309817	-	+	NCL	CTB-161M19.3	232326380	118309689	ENSG00000115053|	ENSG00000197744|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000322723,	UnSpec,	UnSpec 	1:ENST00000322723, 	161:ENST00000322723, 	-1:UnSpec, 	-1:UnSpec, 	MVKLAKAGKNQGDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGKKAAATSAKKVVVSPTKKVAVATPAKKAAVTPGKKAAATPAKKTVTPAKAVTTPGKKGATPGKALVATPGKKGAAIPAKGAKNGKNAKKEDSDEEEDDDSEEDEEDDE:ENST00000322723-UnSpec, 	3:ENST00000322723, 	-1:UnSpec, 	CDS:ENST00000322723, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000322723, 	DOMAIN_UNK:ENST00000322723, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5154	SRR064441	defuse	5	212	14	1	42769954	42770065	91726323	91870426	+	-	AL445074.1	HFM1	43723013	91853147	ENSG00000222084|	ENSG00000162669|	breast_cancer	SRR064439,SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000370421,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000370421, 	-1:ENST00000370421, 	PGTVPGGEFDWGCTPVKR*:UnSpec-ENST00000370421, 	-1:UnSpec, 	Intron:ENST00000370421, 	Intergenic:UnSpec, 	CDS:ENST00000370421, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:ENST00000370421, 
0.0002	5155	SRR064441	defuse	6	5	14	1	102547073	102606086	565020	566063	-	+	HSP90AA1	RP5-857K21.8	102551262	565802	ENSG00000080824|	ENSG00000225630|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000216281,	UnSpec,	UnSpec 	1:ENST00000216281, 	245:ENST00000216281, 	-1:UnSpec, 	-1:UnSpec, 	MPEETQTQDQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKERDKEVSDDEAEEKEDKEEEK:ENST00000216281-UnSpec, 	5:ENST00000216281, 	-1:UnSpec, 	CDS:ENST00000216281, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000216281, 	DOMAIN_UNK:ENST00000216281, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0001	5156	SRR064441	defuse	67	4400	17	11	33474836	33516364	83166055	85338966	+	-	UNC45B	DLG2	33478306	85195011	ENSG00000141161|	ENSG00000150672|	breast_cancer	SRR064437,SRR064439,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE	ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570,	ENST00000376104,	FrameShift 	1:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	481:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	-1:ENST00000376104, 	-1:ENST00000376104, 	MAEVEAVQLKEEGNRHFQLQDYKAATNSYSQALKLTKDKALLATLYRNRAACGLKTESYVQAASDASRAIDINSSDIKALYRRCQALEHLGKLDQAFKDVQRCATLEPRNQNFQEMLRRLNTSIQEKVSWASSHNPWLPSPSLHS*:ENST00000268876-ENST00000376104,ENST00000433649-ENST00000376104,ENST00000378449-ENST00000376104,ENST00000394570-ENST00000376104, 	Intron:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	Intron:ENST00000376104, 	CDS:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	CDS:ENST00000376104, 	NO_DOMAIN:ENST00000378449,ENST00000433649, Repeat=TPR 1,Repeat=TPR 2,Repeat=TPR 3,Repeat=ARM 1,Repeat=ARM 2,:ENST00000268876,ENST00000394570, 	NO_DOMAIN:ENST00000378449,ENST00000433649, Repeat=ARM 3,:ENST00000268876,ENST00000394570, 	NO_DOMAIN:ENST00000376104, 	Domain=PDZ 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=PDZ 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=PDZ 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=SH3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00192,Domain=Guanylate kinase-like;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00100,:ENST00000376104, 
0.0002	5157	SRR064441	defuse	8	3	12	18	17143604	17145017	45357922	45457515	+	-	EEF1A1P33	SMAD2	17144518	45379752	ENSG00000213235|	ENSG00000175387|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000262160,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000262160, 	-1:ENST00000262160, 	PFV*:UnSpec-ENST00000262160, 	-1:UnSpec, 	Intron:ENST00000262160, 	Intergenic:UnSpec, 	CDS:ENST00000262160, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000262160, 	DOMAIN_UNK:ENST00000262160, 
0.0002	5158	SRR064441	defuse	8	49	19	1	24184075	24184165	244270667	244272313	-	+	AC092279.1	RP11-278H7.3	24184159	244354007	ENSG00000251948|	ENSG00000237759|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.5700	5159	SRR064441	defuse	6	11	2	5	232571605	232578251	140894583	140998622	+	-	PTMA	DIAPH1	232577586	140995014	ENSG00000187514|	ENSG00000131504|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000341369,	ENST00000253811,	InFrame 	1:ENST00000341369, 	111:ENST00000341369, 	-1:ENST00000253811, 	-1:ENST00000253811, 	MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD:ENST00000341369-ENST00000253811, 	Intron:ENST00000341369, 	Intron:ENST00000253811, 	3UTR:ENST00000341369, 	CDS:ENST00000253811, 	NO_DOMAIN:ENST00000341369, 	NO_DOMAIN:ENST00000341369, 	DOMAIN_UNK:ENST00000253811, 	DOMAIN_UNK:ENST00000253811, 
0.0002	5160	SRR064441	defuse	42	1	6	3	75947391	75960039	135867764	135916083	-	-	COX7A2	MSL2	75953433	135888312	ENSG00000112695|	ENSG00000174579|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000370081,ENST00000370089,ENST00000230459,	ENST00000309993,	FrameShift 	1:ENST00000370081,ENST00000370089,ENST00000230459, 	38:ENST00000370081,ENST00000370089, 6:ENST00000230459, 	-1:ENST00000309993, 	-1:ENST00000309993, 	MHTQDSEVVPVPAWPFSLVVFSCGGCWSVTAKMLRNLLSQKKHKKQTTHQNQ*:ENST00000370089-ENST00000309993,ENST00000370081-ENST00000309993, MLRNLLSQKKHKKQTTHQNQ*:ENST00000230459-ENST00000309993, 	1:ENST00000370089,ENST00000230459, 2:ENST00000370081, 	Intron:ENST00000309993, 	CDS:ENST00000370081,ENST00000370089,ENST00000230459, 	CDS:ENST00000309993, 	NO_DOMAIN:ENST00000370081,ENST00000370089,ENST00000230459, 	NO_DOMAIN:ENST00000370081,ENST00000370089,ENST00000230459, 	NO_DOMAIN:ENST00000309993, 	Region=Sufficient for interaction with MSL1,:ENST00000309993, 
0.0002	5161	SRR064441	defuse	6	4	1	3	536816	659930	75263782	75264787	-	+	RP5-857K21.4	RP11-642N14.1	568958	75264264	ENSG00000230021|	ENSG00000213300|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	5162	SRR064441	defuse	14	13	8	8	71485677	71520622	86568695	86575726	-	-	TRAM1	REXO1L1	71487240	86573231	ENSG00000067167|	ENSG00000205176|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000262213,	ENST00000379010,	FrameShift 	1:ENST00000262213, 	350:ENST00000262213, 	0:ENST00000379010, 	0:ENST00000379010, 	MAIRKKSTKSPPVLSHEFVLQNHADIVSCVAMVFLLGLMFEITAKASIIFVTLQYNVTLPATEEQATESVSLYYYGIKDLATVFFYMLVAIIIHAVIQEYMLDKINRRMHFSKTKHSKFNESGQLSAFYLFACVWGTFILISENYISDPTILWRAYPHNLMTFQMKFFYISQLAYWLHAFPELYFQKTKKEDIPRQLVYIGLYLFHIAGAYLLNLNHLGLVLLVLHYFVEFLFHISRLFYFSNEKYQKGFSLWAVLFVLGRLLTLILSVLTVGFGLARAENQKLDFSTGNFNVLAVRIAVLASICVTQAFMMWKFINFQLRRWREHSAFQAPAVKKKPTVTKGRSSKKGT:ENST00000262213-ENST00000379010, 	11:ENST00000262213, 	-1:ENST00000379010, 	CDS:ENST00000262213, 	3UTR:ENST00000379010, 	Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Lumenal;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Lumenal;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Lumenal;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Lumenal;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=TLC;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00205,:ENST00000262213, 	NO_DOMAIN:ENST00000262213, 	DOMAIN_UNK:ENST00000379010, 	DOMAIN_UNK:ENST00000379010, 
0.0002	5163	SRR064441	defuse	7	2	20	1	26167655	26189869	156182773	156213123	-	+	RP3-410C9.1	PMF1	26190464	156186593	ENSG00000227195|	ENSG00000160783|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000320139,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000320139, 	-1:ENST00000320139, 	GSWPGPIDSLAGRPASAPGGL*:UnSpec-ENST00000320139, 	-1:UnSpec, 	Intron:ENST00000320139, 	Intergenic:UnSpec, 	CDS:ENST00000320139, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000320139, 	DOMAIN_UNK:ENST00000320139, 
0.0002	5164	SRR064441	defuse	6	5	11	4	2016406	2022700	103552660	103682151	-	-	H19	MANBA	2018906	103649739	ENSG00000130600|	ENSG00000109323|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000226578,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000226578, 	-1:ENST00000226578, 	QNNSIAFFFWSKIKPLLALPTANLIVTCFFQM*:UnSpec-ENST00000226578, 	-1:UnSpec, 	Intron:ENST00000226578, 	Intergenic:UnSpec, 	CDS:ENST00000226578, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000226578, 	DOMAIN_UNK:ENST00000226578, 
0.0002	5165	SRR064441	defuse	6	1	5	10	110613215	110638265	57427101	57428110	-	-	CTC-499J9.1	GAPDHP21	110637923	57600201	ENSG00000248268|	ENSG00000236993|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	5166	SRR064441	defuse	53	14	17	8	38060848	38077313	125500726	125551699	-	-	GSDMB	TATDN1	38066177	125551169	ENSG00000073605|	ENSG00000147687|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000520542,ENST00000523371,ENST00000394179,ENST00000354894,ENST00000360317,ENST00000394175,ENST00000418519,ENST00000524039,ENST00000437352,ENST00000309481,	ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776,	FrameShift 	1:ENST00000520542,ENST00000523371,ENST00000394179,ENST00000354894,ENST00000360317,ENST00000394175,ENST00000418519,ENST00000524039,ENST00000437352,ENST00000309481, 	136:ENST00000520542,ENST00000523371,ENST00000394179,ENST00000354894,ENST00000360317,ENST00000394175,ENST00000418519,ENST00000524039,ENST00000437352,ENST00000309481, 	-1:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	-1:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	MFSVFEEITRIVVKEMDAGGDMIAVRSLVDADRFRCFHLVGEKRTFFGCRHYTTGLTLMDILDTDGDKWLDELDSGLQGQKAEFQILDNVDSTGELIVRLPKEITISGSFQGFHHQKIKISENRISQQYLATLENRCKG*:ENST00000354894-ENST00000276692,ENST00000360317-ENST00000520321,ENST00000394179-ENST00000523214,ENST00000520542-ENST00000520321,ENST00000394179-ENST00000522310,ENST00000309481-ENST00000523214,ENST00000523371-ENST00000519776,ENST00000520542-ENST00000519776,ENST00000524039-ENST00000519776,ENST00000309481-ENST00000520321,ENST00000524039-ENST00000523214,ENST00000523371-ENST00000523214,ENST00000418519-ENST00000276692,ENST00000354894-ENST00000523214,ENST00000418519-ENST00000523214,ENST00000524039-ENST00000276692,ENST00000437352-ENST00000522310,ENST00000437352-ENST00000276692,ENST00000354894-ENST00000520321,ENST00000418519-ENST00000522927,ENST00000360317-ENST00000523214,ENST00000360317-ENST00000522927,ENST00000524039-ENST00000522310,ENST00000354894-ENST00000519776,ENST00000394175-ENST00000522927,ENST00000360317-ENST00000276692,ENST00000523371-ENST00000522927,ENST00000524039-ENST00000522927,ENST00000520542-ENST00000523214,ENST00000394175-ENST00000520321,ENST00000437352-ENST00000522927,ENST00000309481-ENST00000519776,ENST00000523371-ENST00000522310,ENST00000523371-ENST00000276692,ENST00000418519-ENST00000522310,ENST00000394179-ENST00000519776,ENST00000394179-ENST00000520321,ENST00000418519-ENST00000519776,ENST00000394179-ENST00000276692,ENST00000309481-ENST00000276692,ENST00000354894-ENST00000522927,ENST00000520542-ENST00000276692,ENST00000309481-ENST00000522310,ENST00000394175-ENST00000519776,ENST00000354894-ENST00000522310,ENST00000394175-ENST00000522310,ENST00000309481-ENST00000522927,ENST00000394175-ENST00000276692,ENST00000524039-ENST00000520321,ENST00000360317-ENST00000519776,ENST00000523371-ENST00000520321,ENST00000520542-ENST00000522310,ENST00000394179-ENST00000522927,ENST00000437352-ENST00000520321,ENST00000437352-ENST00000523214,ENST00000394175-ENST00000523214,ENST00000520542-ENST00000522927,ENST00000437352-ENST00000519776,ENST00000360317-ENST00000522310,ENST00000418519-ENST00000520321, 	4:ENST00000520542,ENST00000354894,ENST00000394179,ENST00000418519,ENST00000437352,ENST00000309481, 3:ENST00000394175,ENST00000360317,ENST00000523371,ENST00000524039, 	Intron:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	CDS:ENST00000520542,ENST00000523371,ENST00000394179,ENST00000354894,ENST00000360317,ENST00000394175,ENST00000418519,ENST00000524039,ENST00000437352,ENST00000309481, 	CDS:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	NO_DOMAIN:ENST00000520542,ENST00000523371,ENST00000394179,ENST00000354894,ENST00000360317,ENST00000394175,ENST00000418519,ENST00000524039,ENST00000437352,ENST00000309481, 	NO_DOMAIN:ENST00000520542,ENST00000523371,ENST00000394179,ENST00000354894,ENST00000360317,ENST00000394175,ENST00000418519,ENST00000524039,ENST00000437352,ENST00000309481, 	NO_DOMAIN:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	NO_DOMAIN:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 
0.0002	5167	SRR064441	defuse	11	8	2	5	133038647	133038738	134240596	134343649	-	+	AC097532.1	PCBD2	133038705	134260445	ENSG00000252318|	ENSG00000132570|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000254908,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000254908, 	-1:ENST00000254908, 	VVRLF*:UnSpec-ENST00000254908, 	-1:UnSpec, 	Intron:ENST00000254908, 	Intergenic:UnSpec, 	CDS:ENST00000254908, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000254908, 	DOMAIN_UNK:ENST00000254908, 
0.0002	5168	SRR064441	defuse	54	812	19	5	24184075	24184165	71146740	71146942	-	+	AC092279.1	AC116340.1	24184079	71146667	ENSG00000251948|	ENSG00000239935|	breast_cancer	SRR064437,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	5169	SRR064441	defuse	5	38	12	2	121354548	121355039	133038647	133038738	+	-	RPL12P33	AC097532.1	121354535	133038726	ENSG00000244585|	ENSG00000252318|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0003	5170	SRR064441	defuse	5	550	1	X	91726323	91870426	108297361	108297792	-	-	HFM1	RN28S1	91853148	108297364	ENSG00000162669|	ENSG00000226958|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000370421,	UnSpec,	FrameShift 	1:ENST00000370421, 	2332:ENST00000370421, 	-1:UnSpec, 	-1:UnSpec, 	MLKSNDCLFSLENLFFEKPDEVENHPDNEKSLDWFLPPAPLISEIPDTQELEEELESHKLLGQEKRPKMLTSNLKITNEDTNYISLTQKFQFAFPSDKYEQDDLNLEGVGNNDLSHIAGKLTYASQKYKNHIGTEIAPEKSVPDDTKLVNFAEDKGESTSVFRKR*:ENST00000370421-UnSpec, 	Intron:ENST00000370421, 	-1:UnSpec, 	CDS:ENST00000370421, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0001	5171	SRR064441	defuse	5	1	3	X	184032283	184053146	26808259	26808403	+	+	EIF4G1	U1.120	184052702	26911011	ENSG00000114867|	ENSG00000252491|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000319274,	UnSpec,	UnSpec 	0:ENST00000319274, 	0:ENST00000319274, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000319274-UnSpec, 	Intron:ENST00000319274, 	Intron:UnSpec, 	3UTR:ENST00000319274, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000319274, 	DOMAIN_UNK:ENST00000319274, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5172	SRR064441	defuse	5	10	2	1	33050510	33151760	108113461	108113552	+	-	AL121656.4	AC114491.2	33141223	108113543	ENSG00000230876|	ENSG00000252194|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	5173	SRR064441	defuse	11	11	7	13	5465916	5468558	82264203	82264535	-	+	AC092171.2	PTMAP5	5468370	82264560	ENSG00000234432|	ENSG00000214182|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	5174	SRR064441	defuse	6	7	19	1	49999634	50002944	536816	659930	+	-	RPS11	RP5-857K21.4	49999721	568342	ENSG00000142534|	ENSG00000230021|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0001	5175	SRR064441	defuse	7	3	1	19	110210644	110252171	33182867	33204701	+	+	GSTM2	NUDT19	110212273	33184994	ENSG00000213366|	ENSG00000213965|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000369829,ENST00000241337,ENST00000369830,	ENST00000397061,	FrameShift 	1:ENST00000369829,ENST00000241337,ENST00000369830, 	165:ENST00000369830, 146:ENST00000369829,ENST00000241337, 	-1:ENST00000397061, 	-1:ENST00000397061, 	MPMTLGYWNIRGLAHSIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNGMLGSLVAQLSFPGFPSIQLPYLIDGTHKITQSNAILRYIARKHNLCGESEKEQIREDILENQFMDSRMQLAKLCYDPDFVSPPTPLPVSPSLLPVSPFPAEFVSKILILEETNLTRRLKIQGPKASNSKTAVTGCRKGRSHVAQLQRLV*:ENST00000369830-ENST00000397061, MPMTLGYWNIRGLAHSIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNLPYLIDGTHKITQSNAILRYIARKHNLCGESEKEQIREDILENQFMDSRMQLAKLCYDPDFVSPPTPLPVSPSLLPVSPFPAEFVSKILILEETNLTRRLKIQGPKASNSKTAVTGCRKGRSHVAQLQRLV*:ENST00000241337-ENST00000397061,ENST00000369829-ENST00000397061, 	Intron:ENST00000369829,ENST00000241337,ENST00000369830, 	Intron:ENST00000397061, 	CDS:ENST00000369829,ENST00000241337,ENST00000369830, 	CDS:ENST00000397061, 	Domain=GST N-terminal,Domain=GST C-terminal,Region=Glutathione binding;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:16549767,ECO:0000269|PubMed:19808963;Dbxref=PMID:16549767,PMID:19808963,Region=Glutathione binding;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:16549767,ECO:0000269|PubMed:19808963;Dbxref=PMID:16549767,PMID:19808963,Region=Glutathione binding;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:16549767,ECO:0000269|PubMed:19808963;Dbxref=PMID:16549767,PMID:19808963,Region=Glutathione binding;Ontology_term=ECO:0000269,ECO:0000269;evidence=ECO:0000269|PubMed:16549767,ECO:0000269|PubMed:19808963;Dbxref=PMID:16549767,PMID:19808963,:ENST00000241337, Domain=GST N-terminal;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50404,Domain=GST C-terminal;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50405,:ENST00000369829, NO_DOMAIN:ENST00000369830, 	NO_DOMAIN:ENST00000369829,ENST00000241337,ENST00000369830, 	NO_DOMAIN:ENST00000397061, 	Domain=Nudix hydrolase;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00794,:ENST00000397061, 
0.9932	5176	SRR064441	defuse	5	5	5	5	139781399	140099052	141232938	141258811	+	-	ANKHD1	PCDH1	139825560	141234001	ENSG00000131503|	ENSG00000156453|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000394723,ENST00000297183,ENST00000360839,ENST00000253810,ENST00000235510,	ENST00000287008,	InFrame 	1:ENST00000394723,ENST00000297183,ENST00000360839,ENST00000253810,ENST00000235510, 	382:ENST00000394723,ENST00000297183,ENST00000360839,ENST00000253810,ENST00000235510, 	1107:ENST00000287008, 	1237:ENST00000287008, 	MLTDSGGGGTSFEEDLDSVAPRSAPAGASEPPPPGGVGLGIRTVRLFGEAGPASGVGSSGGGGSGSGTGGGDAALDFKLAAAVLRTGGGGGASGSDEDEVSEVESFILDQEDLDNPVLKTTSEIFLSSTAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMKAENSHNAGQVDTRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAASSGGYLDIVKLLLLHDADVNSQSATGNTALTYACAGGFVDIVKVLLNEGANIEDHNENGHTPLMEAASAGHVEVARVLLDHGAGINTHSNEFKESALTLACYKDLRPLPDVAMTGTCTRECSEFGHSDTCWMPGQSSPSRRTKSSALKLSTFVPYQDRGGQEPAGAGSPSPPEDRNTKTAPVRLLPSYSAFSHSSHDSCKDSATLEEIPLTQTSDFPPAATPASAQTAKREIYL:ENST00000394723-ENST00000287008,ENST00000235510-ENST00000287008,ENST00000253810-ENST00000287008,ENST00000360839-ENST00000287008,ENST00000297183-ENST00000287008, 	6:ENST00000394723,ENST00000297183,ENST00000360839,ENST00000253810,ENST00000235510, 	5:ENST00000287008, 	CDS:ENST00000394723,ENST00000297183,ENST00000360839,ENST00000253810,ENST00000235510, 	CDS:ENST00000287008, 	Domain=KH;Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50084,:ENST00000297183, NO_DOMAIN:ENST00000253810,ENST00000235510, Repeat=ANK 1,Repeat=ANK 2,Repeat=ANK 3,Repeat=ANK 4,Repeat=ANK 5,Repeat=ANK 6,:ENST00000394723,ENST00000360839, 	NO_DOMAIN:ENST00000297183,ENST00000253810,ENST00000235510, Repeat=ANK 7,Repeat=ANK 8,Repeat=ANK 9,Repeat=ANK 10,Repeat=ANK 11,Repeat=ANK 12,Repeat=ANK 13,Repeat=ANK 14,Repeat=ANK 15,Repeat=ANK 16,Repeat=ANK 17,Repeat=ANK 18,Repeat=ANK 19,Repeat=ANK 20,Repeat=ANK 21,Repeat=ANK 22,Repeat=ANK 23,Repeat=ANK 24,Repeat=ANK 25,Domain=KH;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00117,:ENST00000394723,ENST00000360839, 	NO_DOMAIN:ENST00000287008, 	Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=Cadherin 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00043,Domain=Cadherin 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00043,Domain=Cadherin 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00043,Domain=Cadherin 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00043,Domain=Cadherin 5;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00043,Domain=Cadherin 6;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00043,Domain=Cadherin 7;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00043,:ENST00000287008, 
0.0002	5177	SRR064441	defuse	8	1	19	19	58816715	58827023	58838385	58853712	+	+	AC020915.4	ZSCAN22	58826404	58836643	ENSG00000142396|	ENSG00000182318|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	5178	SRR064441	defuse	5	12	MT	MT	12337	14148	8527	9207	+	+	MT-ND5	MT-ATP6	14084	8757	ENSG00000198786|	ENSG00000198899|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0001	5179	SRR064441	defuse	6	14	2	17	232571605	232578251	29029524	29029793	+	-	PTMA	AC005562.1	232577586	28997196	ENSG00000187514|	ENSG00000241631|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000341369,	UnSpec,	UnSpec 	0:ENST00000341369, 	0:ENST00000341369, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000341369-UnSpec, 	Intron:ENST00000341369, 	Intron:UnSpec, 	3UTR:ENST00000341369, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000341369, 	DOMAIN_UNK:ENST00000341369, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0003	5180	SRR064441	defuse	5	46	8	X	70584568	70747299	108297361	108297792	-	-	SLCO5A1	RN28S1	70602595	108297354	ENSG00000137571|	ENSG00000226958|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000260126,	UnSpec,	FrameShift 	1:ENST00000260126, 	5431:ENST00000260126, 	-1:UnSpec, 	-1:UnSpec, 	MDEGTGLQPGAGEQLEAPATAEAVQERCEPETLRSKSLPVLSSASCRPSLSPTSGDANPAFGCVDSSGHQELKQGPNPLAPSPSAPSTSAGLGDCNHRVDLSKTFSVSSALAMLQERRCLYVVLTDSRCFLVCMCFLTFIQALMVSGYLSSVITTIERRYSLKSSESGLLVSCFDIGNLVVVVFVSYFGGRGRRPLWLAVGGLLIAFGAALFALPHFISPPYQIQELNASAPNDGLCQGGNSTATLEPPACPKDSGGNNHWVYVALFICAQILIGMGSTPIYTLGPTYLDDNVKKENSSLYLAIMYVMGALGPAVGYLLGGLLIGFYVDPRNPVHLDQNDPRFIGNWWSGFLLCAIAMFLVIFPMFTFPKKLPPRHKKKKKKKFSVDAVSDDDVLKEKSNNSEQADKKVSSMGFGKDVRDLPRAAVRILSNMTFLFVSLSYTAESAIVTAFITFIPKFIESQFGIPASNASIYTGVIIVPSAGVGIVLGGYIIKKLKLGARESAKLAMICSGVSLLCFSTLFIVGCESINLGGINIPYTTG*:ENST00000260126-UnSpec, 	Intron:ENST00000260126, 	-1:UnSpec, 	CDS:ENST00000260126, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000260126, 	DOMAIN_UNK:ENST00000260126, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5181	SRR064441	defuse	5	4	17	1	39679869	39684560	149224058	149224221	-	-	KRT19	RNU1-5	39684080	149224037	ENSG00000171345|	ENSG00000206737|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000361566,	UnSpec,	UnSpec 	1:ENST00000361566, 	140:ENST00000361566, 	-1:UnSpec, 	-1:UnSpec, 	MTSYSYRQSSATSSFGGLGGGSVRFGPGVAFRAPSIHGGSGGRGVSVSSARFVSSSSSGAYGGGYGGVLTASDGLLAGNEKLTMQNLNDRLASYLDKVRALEAANGELEVKIRDWYQKQGPGPSRDYSHYYTTIQDLRDK:ENST00000361566-UnSpec, 	1:ENST00000361566, 	-1:UnSpec, 	CDS:ENST00000361566, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000361566, 	DOMAIN_UNK:ENST00000361566, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0001	5182	SRR064441	defuse	25	137	3	2	126061478	126076285	33050510	33151760	-	+	KLF15	AL121656.4	126062227	33141356	ENSG00000163884|	ENSG00000230876|	breast_cancer	SRR064286,SRR064439,SRR064441,	breast_cancer,	NO_KINASE	ENST00000296233,	UnSpec,	UnSpec 	0:ENST00000296233, 	0:ENST00000296233, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000296233-UnSpec, 	Intron:ENST00000296233, 	Intron:UnSpec, 	3UTR:ENST00000296233, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000296233, 	DOMAIN_UNK:ENST00000296233, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.9803	5183	SRR064441	defuse	5	3	3	3	3742498	4508965	37094117	37225180	-	-	SUMF1	LRRFIP2	4452549	37170640	ENSG00000144455|	ENSG00000093167|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000448413,ENST00000405420,ENST00000272902,	ENST00000421307,ENST00000336686,	InFrame 	1:ENST00000448413,ENST00000405420,ENST00000272902, 	318:ENST00000448413,ENST00000405420,ENST00000272902, 	30:ENST00000421307,ENST00000336686, 	721:ENST00000421307,ENST00000336686, 	MAAPALGLVCGRCPELGLVLLLLLLSLLCGAAGSQEAGTGAGAGSLAGSCGCGTPQRPGAHGSSAAAHRYSREANAPGPVPGERQLAHSKMVPIPAGVFTMGTDDPQIKQDGEAPARRVTIDAFYMDAYEVSNTEFEKFVNSTGYLTEAEKFGDSFVFEGMLSEQVKTNIQQAVAAAPWWLPVKGANWRHPEGPDSTILHRPDHPVLHVSWNDAVAYCTWAGKRLPTEAEWEYSCRGGLHNRLFPWGNKLQPKGQHYANIWQGEFPVTNTGEDGFQGTAPVDAFPPNGYGLYNIVGNAWEWTSDWWTVHHSVEETLNPAEARLAAKRAARAEARDIRMRELERQQKEYSLHSFDRKWGQIQKWLEDSERARYSHRSSHHRPYLGVEDALSIRSVGSHRYDMFKDRSSRLSSLNHSYSHSHGMKKRSSDSHKDLLSGLYFDQRNYSSLRHSKPTSAYYTRQSSSLYSDPLATYKSDRASPTANSGLLRSASLASLYNGGLYNPYGPRTPSECSYYSSRISSARSSPGFTNDDTASIVSSDRASRGRRESVVSAADYFSRSNRRGSVVSEVDDISIPDLSSLDEKSDKQYAENYTRPSSRNSASATTPLSGNSSRRGSGDTSSLIDPDTSLSELRDIYDLKDQIQDVEGRYMQGLKELKESLSEVEEKYKKAMVSNAQLDNEKNNLIYQVDTLKDVIEEQEEQMAEFYRENEEKSKELERQKHMCSVLQHKMEELKEGLRQRDELIEEKQRMQQKIDTMTKEVFDLQETLLWKDKKIGALEKQKEYIACLRNERDMLREELADLQETVKTGEKHGLVIIPDGTPNGDVSHEPVAGAITVVSQEAAQVLESAGEGPLDVRLRKLAGEKEELLSQIRKLKLQLEEERQKCSRNDGTVGDLAGLQNGSDLQFIEMQRDANRQISEYKFKLSKAEQDITTLEQSISRLEGQVLRYKTAAENAEKVEDELKAEKRKLQRELRTALDKIEEMEMTNSHLAKRLEKMKANRTALLAQQ:ENST00000405420-ENST00000336686,ENST00000448413-ENST00000421307,ENST00000405420-ENST00000421307,ENST00000448413-ENST00000336686,ENST00000272902-ENST00000421307,ENST00000272902-ENST00000336686, 	7:ENST00000448413,ENST00000405420,ENST00000272902, 	4:ENST00000421307, 3:ENST00000336686, 	CDS:ENST00000448413,ENST00000405420,ENST00000272902, 	CDS:ENST00000421307,ENST00000336686, 	Domain=FGE-sulfatase;Ontology_term=ECO:0000259;evidence=ECO:0000259|Pfam:PF03781,:ENST00000448413, NO_DOMAIN:ENST00000405420,ENST00000272902, 	NO_DOMAIN:ENST00000448413, Region=Interaction with sulfatases,:ENST00000405420,ENST00000272902, 	NO_DOMAIN:ENST00000421307, Region=DVL3-binding,:ENST00000336686, 	NO_DOMAIN:ENST00000421307,ENST00000336686, 
0.0002	5184	SRR064441	defuse	8	46	19	7	24184075	24184165	30791753	30931696	-	+	AC092279.1	RP4-740D2.1	24184159	30920142	ENSG00000251948|	ENSG00000254959|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0001	5185	SRR064441	defuse	5	1	14	9	23389720	23398661	5629025	5776557	-	+	PRMT5	KIAA1432	23398547	5684297	ENSG00000100462|	ENSG00000107036|	breast_cancer	SRR064441,	breast_cancer,	5p_KINASE	ENST00000216350,ENST00000324366,	ENST00000449720,ENST00000418622,ENST00000251879,ENST00000381532,ENST00000414202,	FrameShift 	1:ENST00000216350,ENST00000324366, 	8:ENST00000216350,ENST00000324366, 	-1:ENST00000449720,ENST00000418622,ENST00000251879,ENST00000381532,ENST00000414202, 	-1:ENST00000449720,ENST00000418622,ENST00000251879,ENST00000381532,ENST00000414202, 	MAAMAVGGPPPSHQFIQKCLLGV*:ENST00000324366-ENST00000449720,ENST00000324366-ENST00000414202,ENST00000216350-ENST00000418622,ENST00000324366-ENST00000418622,ENST00000216350-ENST00000449720,ENST00000216350-ENST00000414202,ENST00000216350-ENST00000381532,ENST00000324366-ENST00000251879,ENST00000216350-ENST00000251879,ENST00000324366-ENST00000381532, 	1:ENST00000216350,ENST00000324366, 	Intron:ENST00000449720,ENST00000418622,ENST00000251879,ENST00000381532,ENST00000414202, 	CDS:ENST00000216350,ENST00000324366, 	CDS:ENST00000449720,ENST00000418622,ENST00000251879,ENST00000381532,ENST00000414202, 	NO_DOMAIN:ENST00000216350,ENST00000324366, 	Domain=SAM-dependent MTase PRMT-type;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU01015,Region=TIM barrel;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:23071334;Dbxref=PMID:23071334,Region=S-adenosyl-L-methionine binding;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:23071334;Dbxref=PMID:23071334,Region=S-adenosyl-L-methionine binding;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:23071334;Dbxref=PMID:23071334,Region=Beta barrel;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:23071334;Dbxref=PMID:23071334,Region=Dimerization;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:23071334;Dbxref=PMID:23071334,:ENST00000216350,ENST00000324366, 	NO_DOMAIN:ENST00000449720,ENST00000418622,ENST00000251879,ENST00000381532,ENST00000414202, 	NO_DOMAIN:ENST00000449720,ENST00000381532, Repeat=WD 1,Repeat=WD 2,:ENST00000418622,ENST00000251879,ENST00000414202, 
0.0003	5186	SRR064441	defuse	18	30	14	10	90863327	90874617	97071528	97321171	+	-	CALM1	SORBS1	90871914	97074766	ENSG00000198668|	ENSG00000095637|	breast_cancer	SRR064441,	breast_cancer,	5p_KINASE																
0.0002	5187	SRR064441	defuse	26	12	8	8	71485677	71520622	86568695	86575726	-	-	TRAM1	REXO1L1	71495404	86571374	ENSG00000067167|	ENSG00000205176|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000262213,	ENST00000379010,	FrameShift 	1:ENST00000262213, 	348:ENST00000262213, 	0:ENST00000379010, 	0:ENST00000379010, 	MAIRKKSTKSPPVLSHEFVLQNHADIVSCVAMVFLLGLMFEITAKASIIFVTLQYNVTLPATEEQATESVSLYYYGIKDLATVFFYMLVAIIIHAVIQEYMLDKINRRMHFSKTKHSKFNESGQLSAFYLFACVWGTFILISENYISDPTILWRAYPHNLMTFQMKFFYISQLAYWLHAFPELYFQKTKKEDIPRQLVYIGLYLFHIAGAYLLNLNHLGLVLLVLHYFVEFLFHISRLFYFSNEKYQKGFSLWAVLFVLGRLLTLILSVLTVGFGLARAENQKLDFSTGNFNVLAVRIAVLASICVTQAFMMWKFINFQLRRWREHSAFQAPAVKKKPTVTKGRSSKK:ENST00000262213-ENST00000379010, 	10:ENST00000262213, 	-1:ENST00000379010, 	CDS:ENST00000262213, 	3UTR:ENST00000379010, 	Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Lumenal;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Lumenal;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Lumenal;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Lumenal;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=TLC;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00205,:ENST00000262213, 	NO_DOMAIN:ENST00000262213, 	DOMAIN_UNK:ENST00000379010, 	DOMAIN_UNK:ENST00000379010, 
0.0002	5188	SRR064441	defuse	28	263	19	1	24184075	24184165	108113461	108113552	-	-	AC092279.1	AC114491.2	24184140	108113527	ENSG00000251948|	ENSG00000252194|	breast_cancer	SRR064439,SRR064441,	breast_cancer,	NO_KINASE																
0.0002	5189	SRR064441	defuse	10	6	MT	MT	14149	14673	8366	8572	-	+	MT-ND6	J01415.25	14352	8417	ENSG00000198695|	ENSG00000228253|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0001	5190	SRR064441	defuse	5	1	8	X	117858174	117887105	17755588	17773105	-	+	RAD21	SCML1	117878982	17755279	ENSG00000164754|	ENSG00000047634|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000297338,	UnSpec,	UnSpec 	0:ENST00000297338, 	0:ENST00000297338, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000297338-UnSpec, 	Intron:ENST00000297338, 	Intron:UnSpec, 	5UTR:ENST00000297338, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000297338, 	DOMAIN_UNK:ENST00000297338, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0001	5191	SRR064441	defuse	20	13	10	14	44101855	44113351	50300810	50311552	+	-	ZNF485	AL627171.1	44113165	50329320	ENSG00000198298|	ENSG00000197502|	breast_cancer	SRR064437,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE	ENST00000361807,	UnSpec,	UnSpec 	0:ENST00000361807, 	0:ENST00000361807, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000361807-UnSpec, 	Intron:ENST00000361807, 	Intron:UnSpec, 	3UTR:ENST00000361807, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000361807, 	DOMAIN_UNK:ENST00000361807, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5192	SRR064441	defuse	6	2	1	19	536816	659930	11750591	11797382	-	+	RP5-857K21.4	ZNF833P	569037	11777167	ENSG00000230021|	ENSG00000197332|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.9970	5193	SRR064441	defuse	9	1	17	8	39679869	39684560	145618444	145634753	-	-	KRT19	CPSF1	39681476	145625522	ENSG00000171345|	ENSG00000071894|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000361566,	ENST00000349769,	InFrame 	1:ENST00000361566, 	156:ENST00000361566, 	313:ENST00000349769, 	1443:ENST00000349769, 	MTSYSYRQSSATSSFGGLGGGSVRFGPGVAFRAPSIHGGSGGRGVSVSSARFVSSSSSGAYGGGYGGVLTASDGLLAGNEKLTMQNLNDRLASYLDKVRALEAANGELEVKIRDWYQKQGPGPSRDYSHYYTTIQDLRDKILGATIENSRIVLQIDKGTAWACLVGLTTHPTGTQEGVRITLDCAQATFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASAVREAADKEEPPSKKKRVDATAGWSAAGKSVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSILNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEDNPKGEGTEQEPSTTPEADDDGRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQLHFIPVDLGAPIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPLHHQSKVITLCLYRDLSGMFTTESRLGGARDELGGRSGPEAEGLGSETSPTVDDEEEMLYGDSGSLFSPSKEEARRSSQPPADRDPAPFRAEPTHWCLLVRENGTMEIYQLPDWRLVFLVKNFPVGQRVLVDSSFGQPTTQGEARREEATRQGELPLVKEVLLVALGSRQSRPYLLVHVDQELLIYEAFPHDSQLGQGNLKVRFKKVPHNINFREKKPKPSKKKAEGGGAEEGAGARGRVARFRYFEDIYGYSGVFICGPSPHWLLVTGRGALRLHPMAIDGPVDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVESKVYAVATSTNTPCARIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSWEAIPNARIELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVTCRGRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGATEGLSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLHVDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTTPDIILDDLLETDRVTAHF:ENST00000361566-ENST00000349769, 	2:ENST00000361566, 	Intron:ENST00000349769, 	CDS:ENST00000361566, 	CDS:ENST00000349769, 	Region=Head,Region=Rod,Region=Coil 1A,Region=Linker 1,Region=Coil 1B,:ENST00000361566, 	Region=Linker 12,Region=Necessary for interaction with PNN,Region=Coil 2,Region=Rod-like helical tail,:ENST00000361566, 	NO_DOMAIN:ENST00000349769, 	NO_DOMAIN:ENST00000349769, 
0.0002	5194	SRR064441	defuse	5	6	17	1	79801037	79818545	565020	566063	-	+	P4HB	RP5-857K21.8	79803063	565829	ENSG00000185624|	ENSG00000225630|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000331483,	UnSpec,	UnSpec 	1:ENST00000331483, 	467:ENST00000331483, 	-1:UnSpec, 	-1:UnSpec, 	MLRRALLCLAVAALVRADAPEEEDHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTASPKEYTAGREADDIVNWLKKRTGPAATTLPDGAAAESLVESSEVAVIGFFKDVESDSAKQFLQAAEAIDDIPFGITSNSDVFSKYQLDKDGVVLFKKFDEGRNNFEGEVTKENLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEVEAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFK:ENST00000331483-UnSpec, 	10:ENST00000331483, 	-1:UnSpec, 	CDS:ENST00000331483, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000331483, 	DOMAIN_UNK:ENST00000331483, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0004	5195	SRR064441	defuse	19	81	8	17	125500726	125551699	38060848	38077313	-	-	TATDN1	GSDMB	125551266	38062238	ENSG00000147687|	ENSG00000073605|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776,	ENST00000520542,ENST00000394175,ENST00000360317,ENST00000354894,ENST00000394179,ENST00000418519,ENST00000309481,	FrameShift 	1:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	7:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	-1:ENST00000520542,ENST00000394175,ENST00000360317,ENST00000354894,ENST00000394179,ENST00000418519,ENST00000309481, 	-1:ENST00000520542,ENST00000394175,ENST00000360317,ENST00000354894,ENST00000394179,ENST00000418519,ENST00000309481, 	MSRFKFIGI*:ENST00000519776-ENST00000394175,ENST00000276692-ENST00000394179,ENST00000276692-ENST00000360317,ENST00000522927-ENST00000394175,ENST00000520321-ENST00000309481,ENST00000522310-ENST00000418519,ENST00000522310-ENST00000354894,ENST00000520321-ENST00000394179,ENST00000519776-ENST00000394179,ENST00000519776-ENST00000520542,ENST00000520321-ENST00000394175,ENST00000519776-ENST00000360317,ENST00000523214-ENST00000354894,ENST00000519776-ENST00000354894,ENST00000523214-ENST00000418519,ENST00000523214-ENST00000394179,ENST00000522310-ENST00000520542,ENST00000276692-ENST00000520542,ENST00000520321-ENST00000354894,ENST00000519776-ENST00000418519,ENST00000276692-ENST00000354894,ENST00000522927-ENST00000360317,ENST00000522927-ENST00000418519,ENST00000520321-ENST00000520542,ENST00000522310-ENST00000394175,ENST00000523214-ENST00000360317,ENST00000522310-ENST00000309481,ENST00000276692-ENST00000309481,ENST00000522927-ENST00000354894,ENST00000523214-ENST00000394175,ENST00000522927-ENST00000520542,ENST00000522927-ENST00000394179,ENST00000520321-ENST00000360317,ENST00000523214-ENST00000520542,ENST00000519776-ENST00000309481,ENST00000522310-ENST00000360317,ENST00000522927-ENST00000309481,ENST00000276692-ENST00000418519,ENST00000276692-ENST00000394175,ENST00000520321-ENST00000418519,ENST00000522310-ENST00000394179,ENST00000523214-ENST00000309481, 	1:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	6:ENST00000394175, 8:ENST00000520542,ENST00000394179,ENST00000309481, 7:ENST00000360317,ENST00000354894, 9:ENST00000418519, 	CDS:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	CDS:ENST00000520542,ENST00000394175,ENST00000360317,ENST00000354894,ENST00000394179,ENST00000418519,ENST00000309481, 	NO_DOMAIN:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	NO_DOMAIN:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	NO_DOMAIN:ENST00000520542,ENST00000394175,ENST00000360317,ENST00000354894,ENST00000394179,ENST00000418519,ENST00000309481, 	NO_DOMAIN:ENST00000520542,ENST00000394175,ENST00000360317,ENST00000354894,ENST00000394179,ENST00000418519,ENST00000309481, 
0.0002	5196	SRR064441	defuse	9	1	19	19	58816715	58827023	58838385	58853712	+	+	AC020915.4	ZSCAN22	58826404	58838248	ENSG00000142396|	ENSG00000182318|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	5197	SRR064441	defuse	20	36	5	2	71146740	71146942	229715242	230136001	+	-	AC116340.1	PID1	71146741	230045405	ENSG00000239935|	ENSG00000153823|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000354069,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000354069, 	-1:ENST00000354069, 	LRCNLRVFKSL*:UnSpec-ENST00000354069, 	-1:UnSpec, 	Intron:ENST00000354069, 	Intergenic:UnSpec, 	CDS:ENST00000354069, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000354069, 	DOMAIN_UNK:ENST00000354069, 
0.0002	5198	SRR064441	defuse	27	7	12	12	123773656	123834988	123849500	123850660	-	+	SBNO1	RP13-942N8.1	123834988	123849248	ENSG00000139697|	ENSG00000256092|	breast_cancer	SRR064287,SRR064438,SRR064439,SRR064441,	breast_cancer,	NO_KINASE	ENST00000267176,	UnSpec,	UnSpec 	1:ENST00000267176, 	0:ENST00000267176, 	-1:UnSpec, 	-1:UnSpec, 	:ENST00000267176-UnSpec, 	1:ENST00000267176, 	-1:UnSpec, 	CDS:ENST00000267176, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000267176, 	DOMAIN_UNK:ENST00000267176, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0022	5199	SRR064441	defuse	25	11	12	7	10100736	10105935	74210483	74267847	-	-	AC091814.3	GTF2IRD2	10105636	74248066	ENSG00000231560|	ENSG00000196275|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000302215,	InFrame 	-1:UnSpec, 	-1:UnSpec, 	33:ENST00000302215, 	949:ENST00000302215, 	CKELAKSKAEVACIAVYETDVFVVGTERGCAFVNARTDFQKDFAKYCVAEGLCEVKPPCPVNGMQVHSGETEILRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLELSNVGKRKIDQEGRVFQEKWERAYFFVEVQNIPTCLICKQSMSVSKEYNLRRHYQTNHSKHYDQYMERMRDEKLHELKKGLRKYLLGLSDTECPEQKQVFAHPSPTQKSPVQPVEDLAGNLWEKLREKIRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFSRVEKSLKKFCIDWSKLVSVASTGTPAMVDANNGLVTKLKSRVATFCKGAELKSICCIIHPESLCAQKLKMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYGSLLYYTEIKWLSRGLVLKRFFESLEEIDSFMSSRGKPLPQLSSIDWIRDLAFLVDMTMHLNALNISLQGHSQIVTQMYDLIRAFLAKLCLWETHLTRNNLAHFPTLKLASRNESDGLNYIPKIAELKTEFQKRLSDFKLYESELTLFSSPFSTKIDSVHEELQMEVIDLQCNTVLKTKYDKVGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQLKDSQWDSVLHIAT:UnSpec-ENST00000302215, 	-1:UnSpec, 	2:ENST00000302215, 	Intergenic:UnSpec, 	CDS:ENST00000302215, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000302215, 	DOMAIN_UNK:ENST00000302215, 
0.9278	5200	SRR064441	defuse	9	2	17	8	76670130	76778379	117654369	117779164	-	-	CYTH1	EIF3H	76778284	117671219	ENSG00000108669|	ENSG00000147677|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000361101,ENST00000262763,ENST00000392457,ENST00000446868,ENST00000392453,	ENST00000276682,ENST00000411422,	InFrame 	1:ENST00000361101,ENST00000262763,ENST00000392457,ENST00000446868,ENST00000392453, 	7:ENST00000361101,ENST00000262763,ENST00000392457,ENST00000446868,ENST00000392453, 	111:ENST00000276682,ENST00000411422, 	366:ENST00000276682,ENST00000411422, 	MEEDDSYVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKANITFEYMFEEVPIVIKNSHLINVLMWELEKKSAVADKHELLSLASSNHLGKNLQLLMDRVDEMSQDIVKYNTYMRNTSKQQQQKHQYQQRRQQENMQRQSRGEPPLPEEDLSKLFKPPQPPARMDSLLIAGQINTYCQNIKEFTAQNLGKLFMAQALQEYNN:ENST00000262763-ENST00000411422,ENST00000392453-ENST00000276682,ENST00000392453-ENST00000411422,ENST00000446868-ENST00000411422,ENST00000361101-ENST00000276682,ENST00000361101-ENST00000411422,ENST00000392457-ENST00000276682,ENST00000262763-ENST00000276682,ENST00000392457-ENST00000411422,ENST00000446868-ENST00000276682, 	1:ENST00000361101,ENST00000262763,ENST00000392457,ENST00000446868,ENST00000392453, 	4:ENST00000411422, 5:ENST00000276682, 	CDS:ENST00000361101,ENST00000262763,ENST00000392457,ENST00000446868,ENST00000392453, 	CDS:ENST00000276682,ENST00000411422, 	NO_DOMAIN:ENST00000361101,ENST00000262763,ENST00000392457,ENST00000446868,ENST00000392453, 	Domain=SEC7;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00189,Domain=PH;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00145,Region=Phosphatidylinositol 3%2C4%2C5-trisphosphate binding;Ontology_term=ECO:0000250;evidence=ECO:0000250,Region=C-terminal autoinhibitory region;Ontology_term=ECO:0000250;evidence=ECO:0000250,:ENST00000361101,ENST00000446868, NO_DOMAIN:ENST00000262763,ENST00000392457,ENST00000392453, 	Domain=MPN (JAB/Mov34);Ontology_term=ECO:0000259;evidence=ECO:0000259|SMART:SM00232,:ENST00000276682, NO_DOMAIN:ENST00000411422, 	NO_DOMAIN:ENST00000276682,ENST00000411422, 
0.0002	5201	SRR064441	defuse	9	9	MT	MT	14149	14673	10760	12137	-	+	MT-ND6	MT-ND4	14365	10853	ENSG00000198695|	ENSG00000198886|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0001	5202	SRR064441	defuse	8	9	19	19	39306068	39322497	39327029	39342987	-	-	ECH1	HNRNPL	39314039	39327518	ENSG00000104823|	ENSG00000104824|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000221418,	ENST00000388750,ENST00000388749,ENST00000221419,	FrameShift 	1:ENST00000221418, 	2676:ENST00000221418, 	-1:ENST00000388750,ENST00000388749,ENST00000221419, 	-1:ENST00000388750,ENST00000388749,ENST00000221419, 	MAAGIVASRRLRDLLTRRLTGSNYPGLSISLRLTGSSAQEEASGVALGEAPDHSYESLRVTSAQKHVLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGTRRSSHTLPAFLAPGNRQWSSASELGF*:ENST00000221418-ENST00000221419,ENST00000221418-ENST00000388750,ENST00000221418-ENST00000388749, 	Intron:ENST00000221418, 	Intron:ENST00000388750,ENST00000388749,ENST00000221419, 	CDS:ENST00000221418, 	CDS:ENST00000388750,ENST00000388749,ENST00000221419, 	Region=Substrate binding;Ontology_term=ECO:0000250;evidence=ECO:0000250|UniProtKB:P42126,:ENST00000221418, 	NO_DOMAIN:ENST00000221418, 	NO_DOMAIN:ENST00000388750,ENST00000388749,ENST00000221419, 	Domain=RRM (RNA recognition motif);Ontology_term=ECO:0000259;evidence=ECO:0000259|PROSITE:PS50102,:ENST00000388749, Domain=RRM 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00176,Domain=RRM 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00176,Domain=RRM 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00176,Domain=RRM 4;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00176,:ENST00000221419, NO_DOMAIN:ENST00000388750, 
0.5700	5203	SRR064441	defuse	16	13	2	11	232571605	232578251	125034583	125303285	+	+	PTMA	PKNOX2	232577586	125289785	ENSG00000187514|	ENSG00000165495|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000341369,	ENST00000298282,	InFrame 	1:ENST00000341369, 	111:ENST00000341369, 	-1:ENST00000298282, 	-1:ENST00000298282, 	MSDAAVDTSSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEEEEEEEGDGEEEDGDEDEEAESATGKRAAEDDEDDDVDTKKQKTDEDD:ENST00000341369-ENST00000298282, 	Intron:ENST00000341369, 	Intron:ENST00000298282, 	3UTR:ENST00000341369, 	CDS:ENST00000298282, 	NO_DOMAIN:ENST00000341369, 	NO_DOMAIN:ENST00000341369, 	DOMAIN_UNK:ENST00000298282, 	DOMAIN_UNK:ENST00000298282, 
0.0002	5204	SRR064441	defuse	5	1	17	16	74035187	74068607	17201254	17564738	-	-	SRP68	XYLT1	74066523	17421441	ENSG00000167881|	ENSG00000103489|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000307877,ENST00000304220,	ENST00000261381,	FrameShift 	1:ENST00000307877,ENST00000304220, 	62:ENST00000307877,ENST00000304220, 	-1:ENST00000261381, 	-1:ENST00000261381, 	MAAEKQVPGGGGGGGSGGGGGSGGGGSGGGRGAGGEENKENERPSAGSKANKEFGDSLSLEILRPSWLTR*:ENST00000304220-ENST00000261381,ENST00000307877-ENST00000261381, 	2:ENST00000307877,ENST00000304220, 	Intron:ENST00000261381, 	CDS:ENST00000307877,ENST00000304220, 	CDS:ENST00000261381, 	NO_DOMAIN:ENST00000307877,ENST00000304220, 	NO_DOMAIN:ENST00000307877,ENST00000304220, 	NO_DOMAIN:ENST00000261381, 	Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Lumenal;Ontology_term=ECO:0000255;evidence=ECO:0000255,:ENST00000261381, 
0.0002	5205	SRR064441	defuse	5	14	11	5	2016406	2022700	134240596	134343649	-	+	H19	PCBD2	2019008	134263563	ENSG00000130600|	ENSG00000132570|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000254908,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000254908, 	-1:ENST00000254908, 	DKEQLNRLLLIWLKNSRGMVLIIRL*:UnSpec-ENST00000254908, 	-1:UnSpec, 	Intron:ENST00000254908, 	Intergenic:UnSpec, 	CDS:ENST00000254908, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000254908, 	DOMAIN_UNK:ENST00000254908, 
0.0003	5206	SRR064441	defuse	7	1	9	5	5629025	5776557	79654899	79655859	+	-	KIAA1432	HNRNPA1P12	5684181	79654982	ENSG00000107036|	ENSG00000220157|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000251879,	UnSpec,	FrameShift 	1:ENST00000251879, 	9247:ENST00000251879, 	-1:UnSpec, 	-1:UnSpec, 	MYFLSGWPKRLLCPLGSPAEAPFHVQSDPQRAFFAVLAAARLSIWYSRPSVLIVTYKEPAKSSTQFGSYKQAEWRPDSTMIAVSVSRFYR*:ENST00000251879-UnSpec, 	Intron:ENST00000251879, 	-1:UnSpec, 	CDS:ENST00000251879, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000251879, 	DOMAIN_UNK:ENST00000251879, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0003	5207	SRR064441	defuse	5	36	1	19	9982171	10003465	24184075	24184165	-	-	LZIC	AC092279.1	9992118	24184160	ENSG00000162441|	ENSG00000251948|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000377213,	UnSpec,	FrameShift 	1:ENST00000377213, 	391:ENST00000377213, 	-1:UnSpec, 	-1:UnSpec, 	MASRGKTETSKLKQNLEEQLDRLMQQLQDLEECREELDTDEYEETKKETLEQLSEFNDSLKKIMSGNMTLVDELSGMQLAIQAAISQAFKTPEVIRLFAKKQPGQLRTRLAEMDRDLMVGKLERDLYTQQKVEILTALRKLGEKVPVFNILVTKKKYELFGTEHLDLWSSLWY*:ENST00000377213-UnSpec, 	Intron:ENST00000377213, 	-1:UnSpec, 	CDS:ENST00000377213, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000377213, 	DOMAIN_UNK:ENST00000377213, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0189	5208	SRR064441	defuse	20	5	12	10	52626954	52662180	21802407	21814611	+	-	KRT7	C10orf140	52642539	21811017	ENSG00000135480|	ENSG00000180592|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000331817,	ENST00000317413,	FrameShift 	1:ENST00000331817, 	594:ENST00000331817, 	-1:ENST00000317413, 	-1:ENST00000317413, 	MSIHFSSPVFTSRSAAFSGRGAQVRLSSARPGGLGSSSLYGLGASRPRVAVRSAYGGPVGAGIREVTINQSLLAPLRLDADPSLQRVRQEESEQIKTLNNKFASFIDKVRFLEQQNKLLETKWTLLQEQKSAKSSRLPDIFEAQIAGLRGQLEALQVDGGRLEAELRSMQDVVEDFKNKYEDEINHRTAAENEFVVLKKDVDAAYMSKVELEAKVDALNDEINFLRTLNETELTELQSQISDTSVVLSMDNSRSLDLDGIIAEVKAQYEEMAKCSRAEAEAWYQTKFETLQAQAGKHGDDLRNTRNEISEMNRAIQRLQAEIDNIKNQRAKLEAAIAEAEERGELALKDARAKQEELEAALQRGKQDMARQLREYQELMSVKLALDIEIATYRKLLEGEESRLAGDGVGAVNICKSLAAAHGKHPLCCLDGAGSREWQTGPGPCWRGQETPSFLQGLTGPLEHILPGSMAWEALQEGRVGPGAPGEQPYPCQMLLLGWPMEGGRGEGEGQLGQEGGVQ*:ENST00000331817-ENST00000317413, 	9:ENST00000331817, 	-1:ENST00000317413, 	CDS:ENST00000331817, 	5UTR:ENST00000317413, 	DOMAIN_UNK:ENST00000331817, 	DOMAIN_UNK:ENST00000331817, 	DOMAIN_UNK:ENST00000317413, 	DOMAIN_UNK:ENST00000317413, 
0.0002	5209	SRR064441	defuse	10	9	11	1	2016406	2022700	565020	566063	-	+	H19	RP5-857K21.8	2019011	565665	ENSG00000130600|	ENSG00000225630|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0003	5210	SRR064441	defuse	5	488	1	X	91726323	91870426	108297361	108297792	-	-	HFM1	RN28S1	91853148	108297723	ENSG00000162669|	ENSG00000226958|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000370421,	UnSpec,	FrameShift 	1:ENST00000370421, 	2332:ENST00000370421, 	-1:UnSpec, 	-1:UnSpec, 	MLKSNDCLFSLENLFFEKPDEVENHPDNEKSLDWFLPPAPLISEIPDTQELEEELESHKLLGQEKRPKMLTSNLKITNEDTNYISLTQKFQFAFPSDKYEQDDLNLEGVGNNDLSHIAGKLTYASQKYKNHIGTEIAPEKSVPDDTKLVNFAEDKGESTSVFRKR*:ENST00000370421-UnSpec, 	Intron:ENST00000370421, 	-1:UnSpec, 	CDS:ENST00000370421, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0001	5211	SRR064441	defuse	7	1	16	9	31191445	31203127	5629025	5776557	+	+	FUS	KIAA1432	31201447	5684122	ENSG00000089280|	ENSG00000107036|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000254108,	ENST00000449720,ENST00000418622,ENST00000251879,ENST00000381532,ENST00000414202,	FrameShift 	1:ENST00000254108, 	466:ENST00000254108, 	-1:ENST00000449720,ENST00000418622,ENST00000251879,ENST00000381532,ENST00000414202, 	-1:ENST00000449720,ENST00000418622,ENST00000251879,ENST00000381532,ENST00000414202, 	MASNDYTQQATQSYGAYPTQPGQGYSQQSSQPYGQQSYSGYSQSTDTSGYGQSSYSSYGQSQNTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGSSSQSSSYGQPQSGSYSQQPSYGGQQQSYGQQQSYNPPQGYGQQNQYNSSSGGGGGGGGGGNYGQDQSSMSSGGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGGGGGGGGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFGGPRDQGSRHDSEQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGMYEKAGRGGAGDIGQQALGNKP*:ENST00000254108-ENST00000449720,ENST00000254108-ENST00000414202,ENST00000254108-ENST00000418622,ENST00000254108-ENST00000381532,ENST00000254108-ENST00000251879, 	11:ENST00000254108, 	Intron:ENST00000449720,ENST00000418622,ENST00000251879,ENST00000381532,ENST00000414202, 	CDS:ENST00000254108, 	CDS:ENST00000449720,ENST00000418622,ENST00000251879,ENST00000381532,ENST00000414202, 	Domain=RRM;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00176,:ENST00000254108, 	NO_DOMAIN:ENST00000254108, 	NO_DOMAIN:ENST00000449720,ENST00000418622,ENST00000251879,ENST00000381532,ENST00000414202, 	NO_DOMAIN:ENST00000449720,ENST00000381532, Repeat=WD 1,Repeat=WD 2,:ENST00000418622,ENST00000251879,ENST00000414202, 
0.1392	5212	SRR064441	defuse	7	1	1	8	224102741	226595780	74332604	74659943	-	-	PARP1	STAU2	226595645	74539467	ENSG00000143799|	ENSG00000040341|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000366790,	ENST00000343268,	FrameShift 	-1:ENST00000366790, 	-1:ENST00000366790, 	-1:ENST00000343268, 	-1:ENST00000343268, 	MAT*:ENST00000366790-ENST00000343268, 	1:ENST00000366790, 	Intron:ENST00000343268, 	5UTR:ENST00000366790, 	CDS:ENST00000343268, 	DOMAIN_UNK:ENST00000366790, 	DOMAIN_UNK:ENST00000366790, 	NO_DOMAIN:ENST00000343268, 	NO_DOMAIN:ENST00000343268, 
0.0002	5213	SRR064441	defuse	6	9	11	10	2016406	2022700	67679719	69455927	-	-	H19	CTNNA3	2019006	69423306	ENSG00000130600|	ENSG00000183230|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	5214	SRR064441	defuse	10	284	1	1	566454	567996	91726323	91870426	+	-	RP5-857K21.6	HFM1	566909	91853147	ENSG00000237973|	ENSG00000162669|	breast_cancer	SRR064439,SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000370421,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000370421, 	-1:ENST00000370421, 	PGTVPGGEFDWGCTPVKR*:UnSpec-ENST00000370421, 	-1:UnSpec, 	Intron:ENST00000370421, 	Intergenic:UnSpec, 	CDS:ENST00000370421, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:ENST00000370421, 
0.0002	5215	SRR064441	defuse	5	6	17	1	39679869	39684560	566454	567996	-	+	KRT19	RP5-857K21.6	39680778	567003	ENSG00000171345|	ENSG00000237973|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000361566,	UnSpec,	UnSpec 	1:ENST00000361566, 	225:ENST00000361566, 	-1:UnSpec, 	-1:UnSpec, 	MTSYSYRQSSATSSFGGLGGGSVRFGPGVAFRAPSIHGGSGGRGVSVSSARFVSSSSSGAYGGGYGGVLTASDGLLAGNEKLTMQNLNDRLASYLDKVRALEAANGELEVKIRDWYQKQGPGPSRDYSHYYTTIQDLRDKILGATIENSRIVLQIDNARLAADDFRTKFETEQALRMSVEADINGLRRVLDELTLARTDLEMQIEGLKEELAYLKKNHEEEISTL:ENST00000361566-UnSpec, 	4:ENST00000361566, 	-1:UnSpec, 	CDS:ENST00000361566, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000361566, 	DOMAIN_UNK:ENST00000361566, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5216	SRR064441	defuse	6	4	MT	MT	12337	14148	4470	5511	+	+	MT-ND5	MT-ND2	14077	5361	ENSG00000198786|	ENSG00000198763|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	5217	SRR064441	defuse	7	2	11	8	62392298	62414104	125058314	125183763	-	-	GANAB	RP11-959I15.3	62406882	125184444	ENSG00000089597|	ENSG00000253868|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000346178,	UnSpec,	UnSpec 	1:ENST00000346178, 	67:ENST00000346178, 	-1:UnSpec, 	-1:UnSpec, 	MAAVAAVAARRRRSWASLVLAFLGVCLGITLAVDRSNFKTCEESSFCKRQRSIRPGLSPYRALLDSL:ENST00000346178-UnSpec, 	3:ENST00000346178, 	-1:UnSpec, 	CDS:ENST00000346178, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000346178, 	DOMAIN_UNK:ENST00000346178, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5218	SRR064441	defuse	12	56	19	17	24184075	24184165	27717943	27871502	-	+	AC092279.1	TAOK1	24184153	27717763	ENSG00000251948|	ENSG00000160551|	breast_cancer	SRR064441,	breast_cancer,	3p_KINASE																
0.0001	5219	SRR064441	defuse	13	9	12	2	119419300	119600856	61704984	61765761	+	-	SRRM4	XPO1	119596803	61764905	ENSG00000139767|	ENSG00000082898|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000267260,	ENST00000401558,	 	1:ENST00000267260, 	611:ENST00000267260, 	-1:ENST00000401558, 	-1:ENST00000401558, 	MASVQQGEKQLFEKFWRGTFKAVATPRPESIIVASITARKPLPRTEPQNNPVVPAQDGPSEKLGQHLATEPLGTNSWERDKTCRELGATRGHSASHDKDLTPPPSSRGKKKKKKSTRKKRRRSSSYSPSPVKKKKKKSSKKHKRRRSFSKKRRHSSSSPKSKRRDEKRHKKQSRSRPRKSHRHRHHRCPSRSQSSESRPSSCESRHRGRSPEEGQKSRRRHSRRCSKTLCKDSPEAQSSRPPSQPLQMLGYLSARGVITGSGSAADLFTKTASPLTTSRGRSQEYDSGNDTSSPPSTQTSSARSRGQEKGSPSGGLSKSRELNSGNTSDSGNSFTTSSPQNKGAMLENLSPTSRGRESRGFQSPCLECAEVKKSSLVPSTARSSPMKGCSRSSSYASTRSSSHSSRSPNPRASPRYTQSRSTSSEKRSYSRSPSYSSKSGKRSPPSRSSRSRRSPSYSRYSPSRERDPKYSEKDSQQRERERARRRRRSYSPMRKRRRDSPSHLEARRITSARKRPIPYYRPSPSSSGSLSSTSSWYSSSSSRSASRSYSRSRSRSRSRRRSRTRTSSSSSSRSPSPGSRSRSRSRSRSRSRSRSQSRSYSSADSYSSTRR:ENST00000267260-ENST00000401558, 	Intron:ENST00000267260, 	Intron:ENST00000401558, 	3UTR:ENST00000267260, 	5UTR:ENST00000401558, 	NO_DOMAIN:ENST00000267260, 	NO_DOMAIN:ENST00000267260, 	DOMAIN_UNK:ENST00000401558, 	DOMAIN_UNK:ENST00000401558, 
0.0002	5220	SRR064441	defuse	5	4	6	6	7541808	7586950	8015959	8102811	+	-	DSP	EEF1E1	7542298	8210015	ENSG00000096696|	ENSG00000124802|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0001	5221	SRR064441	defuse	505	1478	17	11	33474836	33516364	83166055	85338966	+	-	UNC45B	DLG2	33477971	85195014	ENSG00000141161|	ENSG00000150672|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570,	ENST00000376104,	FrameShift 	1:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	370:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	-1:ENST00000376104, 	-1:ENST00000376104, 	MAEVEAVQLKEEGNRHFQLQDYKAATNSYSQALKLTKDKALLATLYRNRAACGLKTESYVQAASDASRAIDINSSDIKALYRRCQALEHLGKLDQAFKDVQRCATLEPRNQNFQEMLRRLNTSIQEKVSWASSHNPWLPSPSLHS*:ENST00000268876-ENST00000376104,ENST00000433649-ENST00000376104,ENST00000378449-ENST00000376104,ENST00000394570-ENST00000376104, 	Intron:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	Intron:ENST00000376104, 	CDS:ENST00000378449,ENST00000433649,ENST00000268876,ENST00000394570, 	CDS:ENST00000376104, 	NO_DOMAIN:ENST00000378449,ENST00000433649, Repeat=TPR 1,Repeat=TPR 2,Repeat=TPR 3,Repeat=ARM 1,Repeat=ARM 2,:ENST00000268876,ENST00000394570, 	NO_DOMAIN:ENST00000378449,ENST00000433649, Repeat=ARM 3,:ENST00000268876,ENST00000394570, 	NO_DOMAIN:ENST00000376104, 	Domain=PDZ 1;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=PDZ 2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=PDZ 3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00143,Domain=SH3;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00192,Domain=Guanylate kinase-like;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00100,:ENST00000376104, 
0.5414	5222	SRR064441	defuse	11	36	8	17	125500726	125551699	38060848	38077313	-	-	TATDN1	GSDMB	125551266	38062524	ENSG00000147687|	ENSG00000073605|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776,	ENST00000360317,ENST00000394179,ENST00000418519,ENST00000309481,	InFrame 	1:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	7:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	243:ENST00000418519, 238:ENST00000360317,ENST00000394179, 230:ENST00000309481, 	403:ENST00000309481, 416:ENST00000418519, 411:ENST00000360317,ENST00000394179, 	MSRFKFIGKSLGSEDSRNMKEKLEDMESVLKDLTEEKRKDVLNSLAKCLGKEDIRQDLEQRVSEVLISGELHMEDPDKPLLSSLFNAAGVLVEARAKAILDFLDALLELSEEQQFVAEALEKGTLPLLKDQVKSVMEQNWDELASSPPDMDYDPEARILCALYVVVSILLELAEGPTSVSS:ENST00000522927-ENST00000418519,ENST00000276692-ENST00000394179,ENST00000276692-ENST00000418519,ENST00000276692-ENST00000360317,ENST00000520321-ENST00000418519,ENST00000276692-ENST00000309481,ENST00000522310-ENST00000418519,ENST00000523214-ENST00000418519,ENST00000519776-ENST00000418519, 	1:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	8:ENST00000418519, 6:ENST00000360317, 7:ENST00000394179,ENST00000309481, 	CDS:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	CDS:ENST00000360317,ENST00000394179,ENST00000418519,ENST00000309481, 	NO_DOMAIN:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	NO_DOMAIN:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	NO_DOMAIN:ENST00000360317,ENST00000394179,ENST00000418519,ENST00000309481, 	NO_DOMAIN:ENST00000360317,ENST00000394179,ENST00000418519,ENST00000309481, 
0.0004	5223	SRR064441	defuse	16	9	20	20	47662838	47713489	47984946	48099184	+	-	CSE1L	KCNB1	47688989	47956856	ENSG00000124207|	ENSG00000158445|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000262982,	UnSpec,	FrameShift 	1:ENST00000262982, 	974:ENST00000262982, 	-1:UnSpec, 	-1:UnSpec, 	MELSDANLQTLTEYLKKTLDPDPAIRRPAEKFLESVEGNQNYPLLLLTLLEKSQDNVIKVCASVTFKNYIKRNWRIVEDEPNKICEADRVAIKANIVHLMLSSPEQIQKQLSDAISIIGREDFPQKWPDLLTEMVNRFQSGDFHVINGVLRTAHSLFKRYRHEFKSNELWTEIKLVLDAFALPLTNLFKATIELCSTHANDASALRILFSSLILISKLFYSLNFQDLPEFFEDNMETWMNNFHTLLTLDNKLLQTDVSI*:ENST00000262982-UnSpec, 	9:ENST00000262982, 	-1:UnSpec, 	CDS:ENST00000262982, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000262982, 	DOMAIN_UNK:ENST00000262982, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5224	SRR064441	defuse	8	70	2	2	33050510	33151760	133038647	133038738	+	-	AL121656.4	AC097532.1	33141360	133038826	ENSG00000230876|	ENSG00000252318|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	5225	SRR064441	defuse	29	61	1	2	108113461	108113552	230045488	230045666	-	-	AC114491.2	AC006368.1	108113125	230045505	ENSG00000252194|	ENSG00000241530|	breast_cancer	SRR064439,SRR064441,	breast_cancer,	NO_KINASE																
0.1281	5226	SRR064441	defuse	5	61	11	17	809647	812880	33474836	33516364	+	+	RPLP2	UNC45B	809991	33478248	ENSG00000177600|	ENSG00000141161|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000321153,	ENST00000268876,	FrameShift 	-1:ENST00000321153, 	-1:ENST00000321153, 	-1:ENST00000268876, 	-1:ENST00000268876, 	MAPSHLSAQAFSGCPEDQVSLCPCPSDRLPIHLLRPRTRTQVLRRQGQPCSLPGPENVAGSLRC*:ENST00000321153-ENST00000268876, 	1:ENST00000321153, 	Intron:ENST00000268876, 	5UTR:ENST00000321153, 	CDS:ENST00000268876, 	DOMAIN_UNK:ENST00000321153, 	DOMAIN_UNK:ENST00000321153, 	NO_DOMAIN:ENST00000268876, 	Repeat=TPR 1,Repeat=TPR 2,Repeat=TPR 3,Repeat=ARM 1,Repeat=ARM 2,Repeat=ARM 3,:ENST00000268876, 
0.0002	5227	SRR064441	defuse	13	44	2	5	133038647	133038738	139624624	139682706	-	-	AC097532.1	PFDN1	133038834	139666183	ENSG00000252318|	ENSG00000113068|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000261813,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000261813, 	-1:ENST00000261813, 	RKKN*:UnSpec-ENST00000261813, 	-1:UnSpec, 	Intron:ENST00000261813, 	Intergenic:UnSpec, 	CDS:ENST00000261813, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000261813, 	DOMAIN_UNK:ENST00000261813, 
0.0002	5228	SRR064441	defuse	21	15	17	8	7760005	7761172	687651	1087777	-	+	LSMD1	CTD-3212A4.1	7760515	923661	ENSG00000183011|	ENSG00000237647|	breast_cancer	SRR064287,SRR064441,	breast_cancer,	NO_KINASE	ENST00000333775,	UnSpec,	UnSpec 	1:ENST00000333775, 	75:ENST00000333775, 	-1:UnSpec, 	-1:UnSpec, 	MAVAVGVRAAPVLGLARALVLGLRGSQAARWRGWGTAAPGSLWALCECPAGCRELWFRGRAAWAARSERLLHPAQ:ENST00000333775-UnSpec, 	1:ENST00000333775, 	-1:UnSpec, 	CDS:ENST00000333775, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000333775, 	DOMAIN_UNK:ENST00000333775, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5229	SRR064441	defuse	5	2	19	1	3972316	3985461	566454	567996	-	+	EEF2	RP5-857K21.6	3981422	567005	ENSG00000167658|	ENSG00000237973|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000309311,	UnSpec,	UnSpec 	1:ENST00000309311, 	308:ENST00000309311, 	-1:UnSpec, 	-1:UnSpec, 	MVNFTVDQIRAIMDKKANIRNMSVIAHVDHGKSTLTDSLVCKAGIIASARAGETRFTDTRKDEQERCITIKSTAISLFYELSENDLNFIKQSKDGAGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLMMNKMDRALLELQLEPEELYQTFQRIVENVNVIISTYGEGESGPMGNIMIDPVLGTVGFGSGLHGWAFTLKQFAEMYVAKFAAKGEGQLGPAERAKKVEDMMKKLWGDRYFDPANGKFSKSATSPEGKKLPRTFCQLILDPIFKVFDAIMNFK:ENST00000309311-UnSpec, 	7:ENST00000309311, 	-1:UnSpec, 	CDS:ENST00000309311, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000309311, 	DOMAIN_UNK:ENST00000309311, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0189	5230	SRR064441	defuse	5	4	19	10	49990811	49995565	79793518	79816570	+	+	RPL13A	RPS24	49994735	79793642	ENSG00000142541|	ENSG00000138326|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000391857,	ENST00000360830,	FrameShift 	1:ENST00000391857, 	260:ENST00000391857, 	-1:ENST00000360830, 	-1:ENST00000360830, 	MAEVQVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKVSPSLRCTIYLGDFRPAEGPGDLEPGR*:ENST00000391857-ENST00000360830, 	7:ENST00000391857, 	-1:ENST00000360830, 	CDS:ENST00000391857, 	5UTR:ENST00000360830, 	DOMAIN_UNK:ENST00000391857, 	DOMAIN_UNK:ENST00000391857, 	DOMAIN_UNK:ENST00000360830, 	DOMAIN_UNK:ENST00000360830, 
0.0002	5231	SRR064441	defuse	6	1	6	6	158703295	158733390	158658368	158663829	+	-	RP11-732M18.3	SRP72P2	158703409	158653333	ENSG00000236537|	ENSG00000188451|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	5232	SRR064441	defuse	5	2	20	10	55743804	55841685	50663414	50747584	-	-	BMP7	ERCC6	55840774	50759137	ENSG00000101144|	ENSG00000225830|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000371291,	UnSpec,	UnSpec 	1:ENST00000371291, 	46:ENST00000371291, 	-1:UnSpec, 	-1:UnSpec, 	MAVEEGGGPGGQGFSYPYKAVFSTQGPPLASLQDSHFLTDADMVMS:ENST00000371291-UnSpec, 	1:ENST00000371291, 	-1:UnSpec, 	CDS:ENST00000371291, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000371291, 	DOMAIN_UNK:ENST00000371291, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0003	5233	SRR064441	defuse	174	346	1	X	91726323	91870426	108297361	108297792	-	-	HFM1	RN28S1	91853147	108297892	ENSG00000162669|	ENSG00000226958|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000370421,	UnSpec,	FrameShift 	1:ENST00000370421, 	2332:ENST00000370421, 	-1:UnSpec, 	-1:UnSpec, 	MLKSNDCLFSLENLFFEKPDEVENHPDNEKSLDWFLPPAPLISEIPDTQELEEELESHKLLGQEKRPKMLTSNLKITNEDTNYISLTQKFQFAFPSDKYEQDDLNLEGVGNNDLSHIAGKLTYASQKYKNHIGTEIAPEKSVPDDTKLVNFAEDKGESTSVFRKR*:ENST00000370421-UnSpec, 	Intron:ENST00000370421, 	-1:UnSpec, 	CDS:ENST00000370421, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5234	SRR064441	defuse	10	8	12	11	6643093	6647537	2016406	2022700	+	-	GAPDH	H19	6647297	2018946	ENSG00000111640|	ENSG00000130600|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000229239,	UnSpec,	UnSpec 	1:ENST00000229239, 	357:ENST00000229239, 	-1:UnSpec, 	-1:UnSpec, 	MGKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTANVSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGYTEHQVVSSDFNSDTHSSTFDAGAGIALNDHFVKLISWYVAGARDWLLKSAGSGALWWLAQKKGPDNSFHLLGMTTNLATAT:ENST00000229239-UnSpec, 	9:ENST00000229239, 	-1:UnSpec, 	CDS:ENST00000229239, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000229239, 	DOMAIN_UNK:ENST00000229239, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5235	SRR064441	defuse	7	128	22	11	21271714	21308037	83166055	85338966	+	-	CRKL	DLG2	21265495	85195049	ENSG00000099942|	ENSG00000150672|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000376104,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000376104, 	-1:ENST00000376104, 	CIPKQPDSWKTRANLHLFILYIP*:UnSpec-ENST00000376104, 	-1:UnSpec, 	Intron:ENST00000376104, 	Intergenic:UnSpec, 	CDS:ENST00000376104, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000376104, 	DOMAIN_UNK:ENST00000376104, 
0.5700	5236	SRR064441	defuse	6	16	7	11	5566782	5603415	114392437	114430617	-	-	ACTB	FAM55A	5567255	114411578	ENSG00000075624|	ENSG00000095110|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000331789,	ENST00000424269,	InFrame 	1:ENST00000331789, 	375:ENST00000331789, 	-1:ENST00000424269, 	-1:ENST00000424269, 	MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF:ENST00000331789-ENST00000424269, 	Intron:ENST00000331789, 	Intron:ENST00000424269, 	3UTR:ENST00000331789, 	CDS:ENST00000424269, 	NO_DOMAIN:ENST00000331789, 	NO_DOMAIN:ENST00000331789, 	DOMAIN_UNK:ENST00000424269, 	DOMAIN_UNK:ENST00000424269, 
0.0002	5237	SRR064441	defuse	184	122	12	1	34372314	34372611	91726323	91870426	-	-	AC140847.1	HFM1	34372653	91852718	ENSG00000243092|	ENSG00000162669|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000370421,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000370421, 	-1:ENST00000370421, 	APEWISHLHYLFYKM*:UnSpec-ENST00000370421, 	-1:UnSpec, 	Intron:ENST00000370421, 	Intergenic:UnSpec, 	CDS:ENST00000370421, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:ENST00000370421, 
0.0004	5238	SRR064441	defuse	6	2	7	19	5938356	5965605	9361606	9362820	+	+	CCZ1	OR7E24	5941333	9361784	ENSG00000122674|	ENSG00000237521|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000456448,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000456448, 	-1:ENST00000456448, 	RISQVSQNSSSWDSQRIQNCSRSSLGCSCPCTWSRCWGTCSSSWLSALTPTSTPPCTSSSPTCPWLTSVSPPPRSPR*:UnSpec-ENST00000456448, 	-1:UnSpec, 	1:ENST00000456448, 	Intergenic:UnSpec, 	CDS:ENST00000456448, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000456448, 	DOMAIN_UNK:ENST00000456448, 
0.0001	5239	SRR064441	defuse	5	81	19	2	46442771	46476657	133038647	133038738	-	-	NOVA2	AC097532.1	46476640	133038720	ENSG00000104967|	ENSG00000252318|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000263257,	UnSpec,	UnSpec 	0:ENST00000263257, 	0:ENST00000263257, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000263257-UnSpec, 	Intron:ENST00000263257, 	Intron:UnSpec, 	5UTR:ENST00000263257, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000263257, 	DOMAIN_UNK:ENST00000263257, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0005	5240	SRR064441	defuse	17	7	17	17	37894187	37903545	37885409	37887040	+	-	GRB7	C17orf37	37898506	37886517	ENSG00000141738|	ENSG00000141741|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000445327,	ENST00000394231,	FrameShift 	1:ENST00000445327, 	1116:ENST00000445327, 	-1:ENST00000394231, 	-1:ENST00000394231, 	MGKWRPGETGSLLASA*:ENST00000445327-ENST00000394231, 	2:ENST00000445327, 	2:ENST00000394231, 	CDS:ENST00000445327, 	CDS:ENST00000394231, 	Domain=Ras-associating;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00166,Domain=PH;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00145,Domain=SH2;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00191,:ENST00000445327, 	NO_DOMAIN:ENST00000445327, 	NO_DOMAIN:ENST00000394231, 	NO_DOMAIN:ENST00000394231, 
0.0002	5241	SRR064441	defuse	5	3	14	14	19650018	19695180	19858667	19941024	+	-	AL589743.1	AL589182.1	19680685	19857070	ENSG00000225210|	ENSG00000249549|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	5242	SRR064441	defuse	5	1	17	8	38465436	38513895	79428374	79517502	+	+	RARA	PKIA	38465538	79510593	ENSG00000131759|	ENSG00000171033|	breast_cancer	SRR064441,	breast_cancer,	3p_KINASE																
0.0001	5243	SRR064441	defuse	6	4	3	17	126061478	126076285	80036215	80056106	-	-	KLF15	FASN	126061972	80054327	ENSG00000163884|	ENSG00000169710|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000296233,	ENST00000306749,	 	1:ENST00000296233, 	416:ENST00000296233, 	-1:ENST00000306749, 	-1:ENST00000306749, 	MVDHLLPVDENFSSPKCPVGYLGDRLVGRRAYHMLPSPVSEDDSDASSPCSCSSPDSQALCSCYGGGLGTESQDSILDFLLSQATLGSGGGSGSSIGASSGPVAWGPWRRAAAPVKGEHFCLPEFPLGDPDDVPRPFQPTLEEIEEFLEENMEPGVKEVPEGNSKDLDACSQLSAGPHKSHLHPGSSGRERCSPPPGGASAGGAQGPGGGPTPDGPIPVLLQIQPVPVKQESGTGPASPGQAPENVKVAQLLVNIQGQTFALVPQVVPSSNLNLPSKFVRIAPVPIAAKPVGSGPLGPGPAGLLMGQKFPKNPAAELIKMHKCTFPGCSKMYTKSSHLKAHLRRHTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPYQCPVCEKKFARSDHLSKHIKVHRFPRSSRSVRSVN:ENST00000296233-ENST00000306749, 	Intron:ENST00000296233, 	Intron:ENST00000306749, 	3UTR:ENST00000296233, 	5UTR:ENST00000306749, 	NO_DOMAIN:ENST00000296233, 	NO_DOMAIN:ENST00000296233, 	DOMAIN_UNK:ENST00000306749, 	DOMAIN_UNK:ENST00000306749, 
0.0001	5244	SRR064441	defuse	6	6	1	1	153586731	153589462	565020	566063	-	+	S100A14	RP5-857K21.8	153587126	565020	ENSG00000189334|	ENSG00000225630|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000344616,	UnSpec,	UnSpec 	0:ENST00000344616, 	0:ENST00000344616, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000344616-UnSpec, 	Intron:ENST00000344616, 	Intron:UnSpec, 	3UTR:ENST00000344616, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000344616, 	DOMAIN_UNK:ENST00000344616, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0001	5245	SRR064441	defuse	7	2	19	1	18682614	18688269	218683438	218699320	+	+	UBA52	C1orf143	18682697	218662424	ENSG00000221983|	ENSG00000228208|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000430157,	UnSpec,	UnSpec 	0:ENST00000430157, 	0:ENST00000430157, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000430157-UnSpec, 	Intron:ENST00000430157, 	Intron:UnSpec, 	5UTR:ENST00000430157, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000430157, 	DOMAIN_UNK:ENST00000430157, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0001	5246	SRR064441	defuse	6	3	5	8	138906016	139008018	125058314	125183763	+	-	UBE2D2	RP11-959I15.3	138941277	125184386	ENSG00000131508|	ENSG00000253868|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000253815,	UnSpec,	UnSpec 	0:ENST00000253815, 	0:ENST00000253815, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000253815-UnSpec, 	Intron:ENST00000253815, 	Intron:UnSpec, 	5UTR:ENST00000253815, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000253815, 	DOMAIN_UNK:ENST00000253815, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5247	SRR064441	defuse	9	8	4	16	78634541	78740769	89627056	89630950	-	+	CNOT6L	RPL13	78635611	89629524	ENSG00000138767|	ENSG00000167526|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	5248	SRR064441	defuse	5	1	12	17	124069078	124083116	27717943	27871502	+	+	TMED2	TAOK1	124069245	27717661	ENSG00000086598|	ENSG00000160551|	breast_cancer	SRR064441,	breast_cancer,	3p_KINASE																
0.0001	5249	SRR064441	defuse	5	4	10	8	44101855	44113351	120874903	120875102	+	+	ZNF485	AP005717.1	44113159	120874989	ENSG00000198298|	ENSG00000244642|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000361807,	UnSpec,	UnSpec 	0:ENST00000361807, 	0:ENST00000361807, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000361807-UnSpec, 	Intron:ENST00000361807, 	Intron:UnSpec, 	3UTR:ENST00000361807, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000361807, 	DOMAIN_UNK:ENST00000361807, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5250	SRR064441	defuse	7	1	5	4	139026884	139063467	190988796	190990406	+	+	CXXC5	DUX4L8	139060340	190988673	ENSG00000171604|	ENSG00000250537|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0001	5251	SRR064441	defuse	11	3	4	19	38628029	38666430	8455205	8469313	-	+	AC021860.1	RAB11B	38629686	8450850	ENSG00000196355|	ENSG00000185236|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000436901,	UnSpec,	UnSpec 	0:ENST00000436901, 	0:ENST00000436901, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000436901-UnSpec, 	Intron:ENST00000436901, 	Intron:UnSpec, 	5UTR:ENST00000436901, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000436901, 	DOMAIN_UNK:ENST00000436901, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.5700	5252	SRR064441	defuse	11	2	3	20	126061478	126076285	2442280	2451499	-	-	KLF15	SNRPB	126061728	2448368	ENSG00000163884|	ENSG00000125835|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000296233,	ENST00000303103,	InFrame 	1:ENST00000296233, 	416:ENST00000296233, 	-1:ENST00000303103, 	-1:ENST00000303103, 	MVDHLLPVDENFSSPKCPVGYLGDRLVGRRAYHMLPSPVSEDDSDASSPCSCSSPDSQALCSCYGGGLGTESQDSILDFLLSQATLGSGGGSGSSIGASSGPVAWGPWRRAAAPVKGEHFCLPEFPLGDPDDVPRPFQPTLEEIEEFLEENMEPGVKEVPEGNSKDLDACSQLSAGPHKSHLHPGSSGRERCSPPPGGASAGGAQGPGGGPTPDGPIPVLLQIQPVPVKQESGTGPASPGQAPENVKVAQLLVNIQGQTFALVPQVVPSSNLNLPSKFVRIAPVPIAAKPVGSGPLGPGPAGLLMGQKFPKNPAAELIKMHKCTFPGCSKMYTKSSHLKAHLRRHTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPYQCPVCEKKFARSDHLSKHIKVHRFPRSSRSVRSVN:ENST00000296233-ENST00000303103, 	Intron:ENST00000296233, 	Intron:ENST00000303103, 	3UTR:ENST00000296233, 	CDS:ENST00000303103, 	NO_DOMAIN:ENST00000296233, 	NO_DOMAIN:ENST00000296233, 	DOMAIN_UNK:ENST00000303103, 	DOMAIN_UNK:ENST00000303103, 
0.5700	5253	SRR064441	defuse	6	1	3	17	126061478	126076285	38278790	38293040	-	+	KLF15	MSL1	126061760	38279411	ENSG00000163884|	ENSG00000188895|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000296233,	ENST00000398532,	InFrame 	1:ENST00000296233, 	416:ENST00000296233, 	-1:ENST00000398532, 	-1:ENST00000398532, 	MVDHLLPVDENFSSPKCPVGYLGDRLVGRRAYHMLPSPVSEDDSDASSPCSCSSPDSQALCSCYGGGLGTESQDSILDFLLSQATLGSGGGSGSSIGASSGPVAWGPWRRAAAPVKGEHFCLPEFPLGDPDDVPRPFQPTLEEIEEFLEENMEPGVKEVPEGNSKDLDACSQLSAGPHKSHLHPGSSGRERCSPPPGGASAGGAQGPGGGPTPDGPIPVLLQIQPVPVKQESGTGPASPGQAPENVKVAQLLVNIQGQTFALVPQVVPSSNLNLPSKFVRIAPVPIAAKPVGSGPLGPGPAGLLMGQKFPKNPAAELIKMHKCTFPGCSKMYTKSSHLKAHLRRHTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPYQCPVCEKKFARSDHLSKHIKVHRFPRSSRSVRSVN:ENST00000296233-ENST00000398532, 	Intron:ENST00000296233, 	Intron:ENST00000398532, 	3UTR:ENST00000296233, 	CDS:ENST00000398532, 	NO_DOMAIN:ENST00000296233, 	NO_DOMAIN:ENST00000296233, 	DOMAIN_UNK:ENST00000398532, 	DOMAIN_UNK:ENST00000398532, 
0.0002	5254	SRR064441	defuse	5	1664	19	19	24184075	24184165	36066627	36066721	-	+	AC092279.1	AD000090.1	24184615	36066695	ENSG00000251948|	ENSG00000252666|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0001	5255	SRR064441	defuse	7	1	X	16	153759606	153775787	23072727	23160591	-	-	G6PD	USP31	153761224	23095026	ENSG00000160211|	ENSG00000103404|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000291567,ENST00000369620,ENST00000442162,	ENST00000219689,	FrameShift 	1:ENST00000291567,ENST00000369620,ENST00000442162, 	328:ENST00000291567, 374:ENST00000369620,ENST00000442162, 	-1:ENST00000219689, 	-1:ENST00000219689, 	MAEQVALSRTQVCGILREELFQGDAFHQSDTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAGQYDDAASYQRLNSHMNALHLGSQANRLFYLALPPTVYEAVTKNIHESCMSQIGWNRIIVEKPFGRDLQSSDRLSNHISSLFREDQIYRIDHYLGKEMVQNLMVLRFANRIFGPIWNRDNIACVILTFKEPFGTEGRGGYFDEFGIIRDVMQNHLLQMLCLVAMEKPASTNSDDVRDEKVKVLKCISEVQANNVVLGQYVGNPDGEGEATKGYLDDPTVPPPRQVCTQL*:ENST00000291567-ENST00000219689, MAEQVALSRTQVCGILREELFQGDAFHQSDTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAGQYDDAASYQRLNSHMNALHLGSQANRLFYLALPPTVYEAVTKNIHESCMSQIGWNRIIVEKPFGRDLQSSDRLSNHISSLFREDQIYRIDHYLGKEMVQNLMVLRFANRIFGPIWNRDNIACVILTFKEPFGTEGRGGYFDEFGIIRGPGRQGGSGSESCSLSLGSLVWGPHALEPGEQGGELRRALASSVPRDVMQNHLLQMLCLVAMEKPASTNSDDVRDEKVKVLKCISEVQANNVVLGQYVGNPDGEGEATKGYLDDPTVPPPRQVCTQL*:ENST00000369620-ENST00000219689,ENST00000442162-ENST00000219689, 	9:ENST00000291567,ENST00000369620,ENST00000442162, 	Intron:ENST00000219689, 	CDS:ENST00000291567,ENST00000369620,ENST00000442162, 	CDS:ENST00000219689, 	NO_DOMAIN:ENST00000291567,ENST00000442162, Region=Substrate binding,:ENST00000369620, 	NO_DOMAIN:ENST00000291567,ENST00000369620,ENST00000442162, 	NO_DOMAIN:ENST00000219689, 	Domain=USP,:ENST00000219689, 
0.0002	5256	SRR064441	defuse	8	3	10	10	72622528	72626426	13319796	13344412	-	-	RP11-432J9.5	PHYH	72622656	13301031	ENSG00000237998|	ENSG00000107537|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	5257	SRR064441	defuse	6	1	18	15	56133495	56133559	71145618	71342434	-	+	AC105105.1	LRRC49	56127590	71151643	ENSG00000252330|	ENSG00000137821|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0004	5258	SRR064441	defuse	5	1	1	6	224544552	224567161	958563	962511	+	-	CNIH4	RP5-1077H22.1	224553584	937455	ENSG00000143771|	ENSG00000229796|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000366856,	UnSpec,	FrameShift 	1:ENST00000366856, 	1819:ENST00000366856, 	-1:UnSpec, 	-1:UnSpec, 	MEAVVFVFSLLDCCALIFLSVYFIITLSDLECDYINARSCCSKLNKVRHFFAHSLALKPGHFPYLRLL*:ENST00000366856-UnSpec, 	3:ENST00000366856, 	-1:UnSpec, 	CDS:ENST00000366856, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000366856, 	DOMAIN_UNK:ENST00000366856, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5259	SRR064441	defuse	5	1	19	4	14625582	14640049	40812044	41218731	-	-	DNAJB1	APBB2	14627707	41218619	ENSG00000132002|	ENSG00000163697|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000254322,	UnSpec,	UnSpec 	1:ENST00000254322, 	121:ENST00000254322, 	-1:UnSpec, 	-1:UnSpec, 	MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGGRNPFDTFFGQRNG:ENST00000254322-UnSpec, 	2:ENST00000254322, 	-1:UnSpec, 	CDS:ENST00000254322, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000254322, 	DOMAIN_UNK:ENST00000254322, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0004	5260	SRR064441	defuse	10	305	8	17	125500726	125551699	38060848	38077313	-	-	TATDN1	GSDMB	125551266	38066177	ENSG00000147687|	ENSG00000073605|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776,	ENST00000520542,ENST00000523371,ENST00000394179,ENST00000354894,ENST00000360317,ENST00000394175,ENST00000418519,ENST00000524039,ENST00000437352,ENST00000309481,	FrameShift 	1:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	7:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	-1:ENST00000520542,ENST00000523371,ENST00000394179,ENST00000354894,ENST00000360317,ENST00000394175,ENST00000418519,ENST00000524039,ENST00000437352,ENST00000309481, 	-1:ENST00000520542,ENST00000523371,ENST00000394179,ENST00000354894,ENST00000360317,ENST00000394175,ENST00000418519,ENST00000524039,ENST00000437352,ENST00000309481, 	MSRFKFIGS*:ENST00000519776-ENST00000394175,ENST00000520321-ENST00000523371,ENST00000276692-ENST00000394179,ENST00000276692-ENST00000360317,ENST00000522927-ENST00000394175,ENST00000276692-ENST00000437352,ENST00000520321-ENST00000309481,ENST00000522310-ENST00000524039,ENST00000522310-ENST00000418519,ENST00000276692-ENST00000524039,ENST00000522310-ENST00000437352,ENST00000522310-ENST00000354894,ENST00000523214-ENST00000524039,ENST00000520321-ENST00000394179,ENST00000519776-ENST00000520542,ENST00000519776-ENST00000394179,ENST00000522310-ENST00000523371,ENST00000520321-ENST00000394175,ENST00000520321-ENST00000437352,ENST00000519776-ENST00000524039,ENST00000519776-ENST00000360317,ENST00000523214-ENST00000354894,ENST00000519776-ENST00000354894,ENST00000523214-ENST00000418519,ENST00000523214-ENST00000394179,ENST00000522310-ENST00000520542,ENST00000276692-ENST00000520542,ENST00000520321-ENST00000354894,ENST00000519776-ENST00000418519,ENST00000522927-ENST00000360317,ENST00000276692-ENST00000354894,ENST00000522927-ENST00000523371,ENST00000522927-ENST00000418519,ENST00000520321-ENST00000520542,ENST00000522310-ENST00000394175,ENST00000523214-ENST00000437352,ENST00000519776-ENST00000437352,ENST00000523214-ENST00000360317,ENST00000522310-ENST00000309481,ENST00000276692-ENST00000309481,ENST00000523214-ENST00000523371,ENST00000522927-ENST00000354894,ENST00000523214-ENST00000394175,ENST00000522927-ENST00000520542,ENST00000522927-ENST00000437352,ENST00000522927-ENST00000394179,ENST00000520321-ENST00000360317,ENST00000523214-ENST00000520542,ENST00000519776-ENST00000309481,ENST00000522310-ENST00000360317,ENST00000522927-ENST00000524039,ENST00000522927-ENST00000309481,ENST00000276692-ENST00000418519,ENST00000276692-ENST00000394175,ENST00000522310-ENST00000394179,ENST00000520321-ENST00000418519,ENST00000276692-ENST00000523371,ENST00000523214-ENST00000309481,ENST00000520321-ENST00000524039,ENST00000519776-ENST00000523371, 	1:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	4:ENST00000520542,ENST00000354894,ENST00000394179,ENST00000418519,ENST00000437352,ENST00000309481, 3:ENST00000394175,ENST00000360317,ENST00000523371,ENST00000524039, 	CDS:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	CDS:ENST00000520542,ENST00000523371,ENST00000394179,ENST00000354894,ENST00000360317,ENST00000394175,ENST00000418519,ENST00000524039,ENST00000437352,ENST00000309481, 	NO_DOMAIN:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	NO_DOMAIN:ENST00000520321,ENST00000522310,ENST00000522927,ENST00000276692,ENST00000523214,ENST00000519776, 	NO_DOMAIN:ENST00000520542,ENST00000523371,ENST00000394179,ENST00000354894,ENST00000360317,ENST00000394175,ENST00000418519,ENST00000524039,ENST00000437352,ENST00000309481, 	NO_DOMAIN:ENST00000520542,ENST00000523371,ENST00000394179,ENST00000354894,ENST00000360317,ENST00000394175,ENST00000418519,ENST00000524039,ENST00000437352,ENST00000309481, 
0.0002	5261	SRR064441	defuse	5	7	11	5	2016406	2022700	177482605	177483195	-	+	H19	RP11-889L3.1	2017385	177482734	ENSG00000130600|	ENSG00000218227|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	5262	SRR064441	defuse	6	3	MT	MT	14149	14673	5904	7445	-	+	MT-ND6	MT-CO1	14184	7230	ENSG00000198695|	ENSG00000198804|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	5263	SRR064441	defuse	6	1	1	4	55315300	55352921	19173958	19458617	-	-	DHCR24	RP11-3J1.1	55337034	19415376	ENSG00000116133|	ENSG00000248238|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000371269,	UnSpec,	UnSpec 	1:ENST00000371269, 	288:ENST00000371269, 	-1:UnSpec, 	-1:UnSpec, 	MEPAVSLAVCALLFLLWVRLKGLEFVLIHQRWVFVCLFLLPLSLIFDIYYYVRAWVVFKLSSAPRLHEQRVRDIQKQVREWKEQGSKTFMCTGRPGWLTVSLRVGKYKKTHKNIMINLMDILEVDTKKQIVRVEPLVTMGQVTALLTSIGWTLPVLPELDDLTVGGLIMGTGIESSSHKYGLFQHICTAYELVLADGSFVRCTPSENSDLFYAVPWSCGTLGFLVAAEIRIIPAKKYVKLRFEPVRGLEAICAKFTHESQRQENHFVEGLLYSLDEAVIMTGVMTDEA:ENST00000371269-UnSpec, 	5:ENST00000371269, 	-1:UnSpec, 	CDS:ENST00000371269, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000371269, 	DOMAIN_UNK:ENST00000371269, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0003	5264	SRR064441	defuse	11	5	12	3	53290971	53298868	126061478	126076285	-	-	KRT8	KLF15	53293813	126061739	ENSG00000170421|	ENSG00000163884|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000293308,	ENST00000296233,	FrameShift 	1:ENST00000293308, 	242:ENST00000293308, 	0:ENST00000296233, 	0:ENST00000296233, 	MSIRVTQKSYKVSTSGPRAFSSRSYTSGPGSRISSSSFSRVGSSNFRGGLGGGYGGASGMGGITAVTVNQSLLSPLVLEVDPNIQAVRTQEKEQIKTLNNKFASFIDKVRFLEQQNKMLETKWSLLQQQKTARSNMDNMFESYINNLRRQLETLGQEKLKLEAELGNMQGLVEDFKNKYEDEINKRTEMENEFVLIKKDVDEAYMNKVELESRLEGLTDEINFLRQLYEEEIRELQSQISDT:ENST00000293308-ENST00000296233, 	5:ENST00000293308, 	-1:ENST00000296233, 	CDS:ENST00000293308, 	3UTR:ENST00000296233, 	Region=Head,Region=Rod,Region=Coil 1A,Region=Linker 1,Region=Coil 1B,Region=Linker 12,:ENST00000293308, 	Region=Coil 2,Region=Necessary for interaction with PNN,Region=Tail,:ENST00000293308, 	DOMAIN_UNK:ENST00000296233, 	DOMAIN_UNK:ENST00000296233, 
0.0003	5265	SRR064441	defuse	7	540	17	21	33474836	33516364	35445892	35732332	+	+	UNC45B	AP000318.2	33478117	35677489	ENSG00000141161|	ENSG00000214955|	breast_cancer	SRR064287,SRR064438,SRR064441,	breast_cancer,	NO_KINASE	ENST00000268876,	UnSpec,	FrameShift 	1:ENST00000268876, 	418:ENST00000268876, 	-1:UnSpec, 	-1:UnSpec, 	MAEVEAVQLKEEGNRHFQLQDYKAATNSYSQALKLTKDKALLATLYRNRAACGLKTESYVQAASDASRAIDINSSDIKALYRRCQALEHLGKLDQAFKDVQRCATLEPRNQNFQEMLRRLNTSIQEKVSWASSHNPWLPSPSLHS*:ENST00000268876-UnSpec, 	Intron:ENST00000268876, 	-1:UnSpec, 	CDS:ENST00000268876, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000268876, 	DOMAIN_UNK:ENST00000268876, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0004	5266	SRR064441	defuse	7	7	12	10	52626954	52662180	50663414	50747584	+	-	KRT7	ERCC6	52642535	50759057	ENSG00000135480|	ENSG00000225830|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000331817,	UnSpec,	FrameShift 	1:ENST00000331817, 	593:ENST00000331817, 	-1:UnSpec, 	-1:UnSpec, 	MSIHFSSPVFTSRSAAFSGRGAQVRLSSARPGGLGSSSLYGLGASRPRVAVRSAYGGPVGAGIREVTINQSLLAPLRLDADPSLQRVRQEESEQIKTLNNKFASFIDKVRFLEQQNKLLETKWTLLQEQKSAKSSRLPDIFEAQIAGLRGQLEALQVDGGRLEAELRSMQDVVEDFKNKYEDEINHRTAAENEFVVLKKDVDAAYMSKVELEAKVDALNDEINFLRTLNETELTELQSQISDTSVVLSMDNSRSLDLDGIIAEVKAQYEEMAKCSRAEAEAWYQTKFETLQAQAGKHGDDLRNTRNEISEMNRAIQRLQAEIDNIKNQRAKLEAAIAEAEERGELALKDARAKQEELEAALQRGKQDMARQLREYQELMSVKLALDIEIATYRKLLEGEESRLAGDGVGAVNICKSLAAAHGKHPLCCLDGAGSREWQTGPGPCWRGQETPSFLQGLTGPLEHILPGSMAWEALQEGRVGPGAPGEQPYPCQMLLLGWPMEGGRGEGEGQLGQEGGVQ*:ENST00000331817-UnSpec, 	9:ENST00000331817, 	-1:UnSpec, 	CDS:ENST00000331817, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000331817, 	DOMAIN_UNK:ENST00000331817, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5267	SRR064441	defuse	6	57	19	2	9434873	9454519	133038647	133038738	+	-	ZNF559	AC097532.1	9432724	133038727	ENSG00000188321|	ENSG00000252318|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.1392	5268	SRR064441	defuse	9	2	17	13	80036215	80056106	96329411	96443301	-	+	FASN	DNAJC3	80054328	96375016	ENSG00000169710|	ENSG00000102580|	breast_cancer	SRR064441,	breast_cancer,	3p_KINASE	ENST00000306749,	ENST00000360638,	FrameShift 	-1:ENST00000306749, 	-1:ENST00000306749, 	-1:ENST00000360638, 	-1:ENST00000360638, 	MIMPLRSNLGDRHLVRPPPPPPPPPKKVIS*:ENST00000306749-ENST00000360638, 	2:ENST00000306749, 	Intron:ENST00000360638, 	5UTR:ENST00000306749, 	CDS:ENST00000360638, 	DOMAIN_UNK:ENST00000306749, 	DOMAIN_UNK:ENST00000306749, 	NO_DOMAIN:ENST00000360638, 	NO_DOMAIN:ENST00000360638, 
0.0002	5269	SRR064441	defuse	9	1	17	4	48939584	48945339	190988796	190990406	-	+	TOB1	DUX4L8	48940702	190988832	ENSG00000141232|	ENSG00000250537|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000268957,	UnSpec,	UnSpec 	1:ENST00000268957, 	225:ENST00000268957, 	-1:UnSpec, 	-1:UnSpec, 	MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERLLKKKYEGHWYPEKPYKGSGFRCIHIGEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDNNENGCELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPPFGHSAAVSPTFMPRSTQPLTFTTATFAATKFGSTKMKNSGRSNKVARTSPINLGLNVNDLLKQKAISSS:ENST00000268957-UnSpec, 	3:ENST00000268957, 	-1:UnSpec, 	CDS:ENST00000268957, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000268957, 	DOMAIN_UNK:ENST00000268957, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5270	SRR064441	defuse	7	7	19	7	34080112	34080594	153584182	154685995	-	+	CTD-2329C7.1	DPP6	34080086	153740498	ENSG00000232429|	ENSG00000130226|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000404039,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000404039, 	-1:ENST00000404039, 	KKKKKKKKRTYSKIFIKCSDKYTTRGSVL*:UnSpec-ENST00000404039, 	-1:UnSpec, 	Intron:ENST00000404039, 	Intergenic:UnSpec, 	CDS:ENST00000404039, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000404039, 	DOMAIN_UNK:ENST00000404039, 
0.0001	5271	SRR064441	defuse	5	9	16	1	18802991	18812917	536816	659930	-	-	ARL6IP1	RP5-857K21.4	18812818	569305	ENSG00000170540|	ENSG00000230021|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000304414,	UnSpec,	UnSpec 	0:ENST00000304414, 	0:ENST00000304414, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000304414-UnSpec, 	Intron:ENST00000304414, 	Intron:UnSpec, 	5UTR:ENST00000304414, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000304414, 	DOMAIN_UNK:ENST00000304414, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5272	SRR064441	defuse	180	3162	5	2	71146740	71146942	133038647	133038738	+	-	AC116340.1	AC097532.1	71146755	133038453	ENSG00000239935|	ENSG00000252318|	breast_cancer	SRR064437,SRR064439,SRR064440,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE																
0.0002	5273	SRR064441	defuse	7	549	8	1	70584568	70747299	91726323	91870426	-	-	SLCO5A1	HFM1	70602606	91853148	ENSG00000137571|	ENSG00000162669|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000260126,	ENST00000370424,ENST00000370425,ENST00000370421,	FrameShift 	1:ENST00000260126, 	5427:ENST00000260126, 	-1:ENST00000370424,ENST00000370425,ENST00000370421, 	-1:ENST00000370424,ENST00000370425,ENST00000370421, 	MDEGTGLQPGAGEQLEAPATAEAVQERCEPETLRSKSLPVLSSASCRPSLSPTSGDANPAFGCVDSSGHQELKQGPNPLAPSPSAPSTSAGLGDCNHRVDLSKTFSVSSALAMLQERRCLYVVLTDSRCFLVCMCFLTFIQALMVSGYLSSVITTIERRYSLKSSESGLLVSCFDIGNLVVVVFVSYFGGRGRRPLWLAVGGLLIAFGAALFALPHFISPPYQIQELNASAPNDGLCQGGNSTATLEPPACPKDSGGNNHWVYVALFICAQILIGMGSTPIYTLGPTYLDDNVKKENSSLYLAIMYVMGALGPAVGYLLGGLLIGFYVDPRNPVHLDQNDPRFIGNWWSGFLLCAIAMFLVIFPMFTFPKKLPPRHKKKKKKKFSVDAVSDDDVLKEKSNNSEQADKKVSSMGFGKDVRDLPRAAVRILSNMTFLFVSLSYTAESAIVTAFITFIPKFIESQFGIPASNASIYTGVIIVPSAGVGIVLGGYIIKKLKLGARESAKLAMICSGVSLLCFSTLFIVGCESINLGGINIPYTTG*:ENST00000260126-ENST00000370425,ENST00000260126-ENST00000370424,ENST00000260126-ENST00000370421, 	Intron:ENST00000260126, 	Intron:ENST00000370424,ENST00000370425,ENST00000370421, 	CDS:ENST00000260126, 	CDS:ENST00000370424,ENST00000370425,ENST00000370421, 	Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=Kazal-like;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00798,:ENST00000260126, 	NO_DOMAIN:ENST00000260126, 	NO_DOMAIN:ENST00000370424,ENST00000370425,ENST00000370421, 	Domain=Helicase ATP-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00541,Domain=Helicase C-terminal;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00542,Domain=SEC63,:ENST00000370425, NO_DOMAIN:ENST00000370424,ENST00000370421, 
0.0002	5274	SRR064441	defuse	5	46	1	19	536816	659930	24184075	24184165	-	-	RP5-857K21.4	AC092279.1	569479	24184160	ENSG00000230021|	ENSG00000251948|	breast_cancer	SRR064438,SRR064441,	breast_cancer,	NO_KINASE																
0.0002	5275	SRR064441	defuse	27	1	17	1	39679869	39684560	178694300	179065553	-	+	KRT19	RALGPS2	39681476	179052736	ENSG00000171345|	ENSG00000116191|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000361566,	UnSpec,	UnSpec 	1:ENST00000361566, 	156:ENST00000361566, 	-1:UnSpec, 	-1:UnSpec, 	MTSYSYRQSSATSSFGGLGGGSVRFGPGVAFRAPSIHGGSGGRGVSVSSARFVSSSSSGAYGGGYGGVLTASDGLLAGNEKLTMQNLNDRLASYLDKVRALEAANGELEVKIRDWYQKQGPGPSRDYSHYYTTIQDLRDKILGATIENSRIVLQID:ENST00000361566-UnSpec, 	2:ENST00000361566, 	-1:UnSpec, 	CDS:ENST00000361566, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000361566, 	DOMAIN_UNK:ENST00000361566, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.9963	5276	SRR064441	defuse	13	4	12	8	53290971	53298868	145618444	145634753	-	-	KRT8	CPSF1	53294410	145625496	ENSG00000170421|	ENSG00000071894|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000293308,	ENST00000349769,	InFrame 	1:ENST00000293308, 	217:ENST00000293308, 	313:ENST00000349769, 	1443:ENST00000349769, 	MSIRVTQKSYKVSTSGPRAFSSRSYTSGPGSRISSSSFSRVGSSNFRGGLGGGYGGASGMGGITAVTVNQSLLSPLVLEVDPNIQAVRTQEKEQIKTLNNKFASFIDKVRFLEQQNKMLETKWSLLQQQKTARSNMDNMFESYINNLRRQLETLGQEKLKLEAELGNMQGLVEDFKNKYEDEINKRTEMENEFVLIKKDVDEAYMNKVELESRLEGLSLTTHPTGTQEGVRITLDCAQATFISYDKMVISLKGGEIYVLTLITDGMRSVRAFHFDKAAASVLTTSMVTMEPGYLFLGSRLGNSLLLKYTEKLQEPPASAVREAADKEEPPSKKKRVDATAGWSAAGKSVPQDEVDEIEVYGSEAQSGTQLATYSFEVCDSILNIGPCANAAVGEPAFLSEEFQNSPEPDLEIVVCSGHGKNGALSVLQKSIRPQVVTTFELPGCYDMWTVIAPVRKEEEDNPKGEGTEQEPSTTPEADDDGRRHGFLILSREDSTMILQTGQEIMELDTSGFATQGPTVFAGNIGDNRYIVQVSPLGIRLLEGVNQLHFIPVDLGAPIVQCAVADPYVVIMSAEGHVTMFLLKSDSYGGRHHRLALHKPPLHHQSKVITLCLYRDLSGMFTTESRLGGARDELGGRSGPEAEGLGSETSPTVDDEEEMLYGDSGSLFSPSKEEARRSSQPPADRDPAPFRAEPTHWCLLVRENGTMEIYQLPDWRLVFLVKNFPVGQRVLVDSSFGQPTTQGEARREEATRQGELPLVKEVLLVALGSRQSRPYLLVHVDQELLIYEAFPHDSQLGQGNLKVRFKKVPHNINFREKKPKPSKKKAEGGGAEEGAGARGRVARFRYFEDIYGYSGVFICGPSPHWLLVTGRGALRLHPMAIDGPVDSFAPFHNVNCPRGFLYFNRQGELRISVLPAYLSYDAPWPVRKIPLRCTAHYVAYHVESKVYAVATSTNTPCARIPRMTGEEKEFETIERDERYIHPQQEAFSIQLISPVSWEAIPNARIELQEWEHVTCMKTVSLRSEETVSGLKGYVAAGTCLMQGEEVTCRGRILIMDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHCNGHLVSAIGQKIFLWSLRASELTGMAFIDTQLYIHQMISVKNFILAADVMKSISLLRYQEESKTLSLVSRDAKPLEVYSVDFMVDNAQLGFLVSDRDRNLMVYMYLPEAKESFGGMRLLRRADFHVGAHVNTFWRTPCRGATEGLSKKSVVWENKHITWFATLDGGIGLLLPMQEKTYRRLLMLQNALTTMLPHHAGLNPRAFRMLHVDRRTLQNAVRNVLDGELLNRYLYLSTMERSELAKKIGTTPDIILDDLLETDRVTAHF:ENST00000293308-ENST00000349769, 	4:ENST00000293308, 	Intron:ENST00000349769, 	CDS:ENST00000293308, 	CDS:ENST00000349769, 	Region=Head,Region=Rod,Region=Coil 1A,Region=Linker 1,Region=Coil 1B,:ENST00000293308, 	Region=Linker 12,Region=Coil 2,Region=Necessary for interaction with PNN,Region=Tail,:ENST00000293308, 	NO_DOMAIN:ENST00000349769, 	NO_DOMAIN:ENST00000349769, 
0.0002	5277	SRR064441	defuse	5	2	MT	MT	8527	9207	12337	14148	+	+	MT-ATP6	MT-ND5	9192	13024	ENSG00000198899|	ENSG00000198786|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0003	5278	SRR064441	defuse	15	8	8	8	71485677	71520622	86568695	86575726	-	-	TRAM1	REXO1L1	71492314	86563816	ENSG00000067167|	ENSG00000205176|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000262213,	UnSpec,	FrameShift 	1:ENST00000262213, 	1378:ENST00000262213, 	-1:UnSpec, 	-1:UnSpec, 	MAIRKKSTKSPPVLSHEFVLQNHADIVSCVAMVFLLGLMFEITAKASIIFVTLQYNVTLPATEEQATESVSLYYYGIKDLATVFFYMLVAIIIHAVIQEYMLDKINRRMHFSKTKHSKFNESGQLSAFYLFACVWGTFILISENYISDPTILWRAYPHNLMTFQMKFFYISQLAYWLHAFPELYFQKTKKEDIPRQLVYIGLYLFHIAGAYLLNLNHLGLVLLVLHYFVEFLFHISRLFYFSNEKYQKGFSLWAVLFVLGRLLTLILSVLTVGFGLARAENQKLDFSTGNFNVLAVRIAVLASICVTQAFMMWKFINFQLRRWREHSAFQAPAVKKKPTVTKGRSSKKGTGLYSVSNEKLMEVENF*:ENST00000262213-UnSpec, 	Intron:ENST00000262213, 	-1:UnSpec, 	CDS:ENST00000262213, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000262213, 	DOMAIN_UNK:ENST00000262213, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0003	5279	SRR064441	defuse	5	5	7	12	26677490	26686889	52626954	52662180	+	+	C7orf71	KRT7	26683245	52642534	ENSG00000222004|	ENSG00000135480|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000409974,	ENST00000331817,ENST00000422319,	FrameShift 	1:ENST00000409974, 	1043:ENST00000409974, 	-1:ENST00000331817,ENST00000422319, 	-1:ENST00000331817,ENST00000422319, 	MGSCGWALTQSDWCPFKKRKRHQRCAHSETRHMRTQRQGGYLQARERGLGEANPAYALILDFQPPELQNLSEMGINHELGYSSIIPMMKR*:ENST00000409974-ENST00000422319,ENST00000409974-ENST00000331817, 	Intron:ENST00000409974, 	10:ENST00000422319, 9:ENST00000331817, 	CDS:ENST00000409974, 	CDS:ENST00000331817,ENST00000422319, 	NO_DOMAIN:ENST00000409974, 	NO_DOMAIN:ENST00000409974, 	NO_DOMAIN:ENST00000331817,ENST00000422319, 	NO_DOMAIN:ENST00000422319, Region=Head,Region=Coil 1A,Region=Rod,Region=Interaction with HPV16 E7,Region=Linker 1,Region=Coil 1B,Region=Linker 12,Region=Coil 2,Region=Tail,:ENST00000331817, 
0.0002	5280	SRR064441	defuse	14	12	9	1	79186649	79186950	91726323	91870426	+	-	AL161626.1	HFM1	79186404	91852783	ENSG00000241781|	ENSG00000162669|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000370421,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000370421, 	-1:ENST00000370421, 	EVLFHRQD*:UnSpec-ENST00000370421, 	-1:UnSpec, 	Intron:ENST00000370421, 	Intergenic:UnSpec, 	CDS:ENST00000370421, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:ENST00000370421, 
0.0001	5281	SRR064441	defuse	6	1	17	1	16284113	16286054	566454	567996	+	+	UBB	RP5-857K21.6	16284428	566870	ENSG00000170315|	ENSG00000237973|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000302182,	UnSpec,	UnSpec 	0:ENST00000302182, 	0:ENST00000302182, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000302182-UnSpec, 	Intron:ENST00000302182, 	Intron:UnSpec, 	5UTR:ENST00000302182, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000302182, 	DOMAIN_UNK:ENST00000302182, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5282	SRR064441	defuse	7	83	2	2	33050510	33151760	133038647	133038738	+	-	AL121656.4	AC097532.1	33141340	133038826	ENSG00000230876|	ENSG00000252318|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	5283	SRR064441	defuse	51	83	19	2	24184075	24184165	33050510	33151760	-	+	AC092279.1	AL121656.4	24184151	33141250	ENSG00000251948|	ENSG00000230876|	breast_cancer	SRR064439,SRR064441,	breast_cancer,	NO_KINASE																
0.0002	5284	SRR064441	defuse	10	9	11	5	2016406	2022700	134240596	134343649	-	+	H19	PCBD2	2019010	134264159	ENSG00000130600|	ENSG00000132570|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000254908,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000254908, 	-1:ENST00000254908, 	DVTISGKLVVCRAHGKGKRSEGY*:UnSpec-ENST00000254908, 	-1:UnSpec, 	Intron:ENST00000254908, 	Intergenic:UnSpec, 	CDS:ENST00000254908, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000254908, 	DOMAIN_UNK:ENST00000254908, 
0.0002	5285	SRR064441	defuse	19	41	19	X	24184075	24184165	31132808	33357558	-	-	AC092279.1	DMD	24184150	32777976	ENSG00000251948|	ENSG00000198947|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000288447,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000288447, 	-1:ENST00000288447, 	PPPPPQEKPASALNIRSSSQYEIHQAKAYLVCSCSSLKL*:UnSpec-ENST00000288447, 	-1:UnSpec, 	Intron:ENST00000288447, 	Intergenic:UnSpec, 	CDS:ENST00000288447, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000288447, 	DOMAIN_UNK:ENST00000288447, 
0.0002	5286	SRR064441	defuse	137	80	12	9	34372314	34372611	79186649	79186950	-	+	AC140847.1	AL161626.1	34372630	79186543	ENSG00000243092|	ENSG00000241781|	breast_cancer	SRR064439,SRR064441,	breast_cancer,	NO_KINASE																
0.0002	5287	SRR064441	defuse	6	3	2	2	74213653	74220867	74229840	74329698	+	+	RP11-711M9.1	TET3	74213833	74230237	ENSG00000255989|	ENSG00000187605|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	5288	SRR064441	defuse	5	569	8	1	70584568	70747299	91726323	91870426	-	-	SLCO5A1	HFM1	70602280	91853148	ENSG00000137571|	ENSG00000162669|	breast_cancer	SRR064439,SRR064441,	breast_cancer,	NO_KINASE	ENST00000260126,	ENST00000370424,ENST00000370425,ENST00000370421,	FrameShift 	1:ENST00000260126, 	5536:ENST00000260126, 	-1:ENST00000370424,ENST00000370425,ENST00000370421, 	-1:ENST00000370424,ENST00000370425,ENST00000370421, 	MDEGTGLQPGAGEQLEAPATAEAVQERCEPETLRSKSLPVLSSASCRPSLSPTSGDANPAFGCVDSSGHQELKQGPNPLAPSPSAPSTSAGLGDCNHRVDLSKTFSVSSALAMLQERRCLYVVLTDSRCFLVCMCFLTFIQALMVSGYLSSVITTIERRYSLKSSESGLLVSCFDIGNLVVVVFVSYFGGRGRRPLWLAVGGLLIAFGAALFALPHFISPPYQIQELNASAPNDGLCQGGNSTATLEPPACPKDSGGNNHWVYVALFICAQILIGMGSTPIYTLGPTYLDDNVKKENSSLYLAIMYVMGALGPAVGYLLGGLLIGFYVDPRNPVHLDQNDPRFIGNWWSGFLLCAIAMFLVIFPMFTFPKKLPPRHKKKKKKKFSVDAVSDDDVLKEKSNNSEQADKKVSSMGFGKDVRDLPRAAVRILSNMTFLFVSLSYTAESAIVTAFITFIPKFIESQFGIPASNASIYTGVIIVPSAGVGIVLGGYIIKKLKLGARESAKLAMICSGVSLLCFSTLFIVGCESINLGGINIPYTTG*:ENST00000260126-ENST00000370425,ENST00000260126-ENST00000370424,ENST00000260126-ENST00000370421, 	Intron:ENST00000260126, 	Intron:ENST00000370424,ENST00000370425,ENST00000370421, 	CDS:ENST00000260126, 	CDS:ENST00000370424,ENST00000370425,ENST00000370421, 	Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Extracellular;Ontology_term=ECO:0000255;evidence=ECO:0000255,Topological domain=Cytoplasmic;Ontology_term=ECO:0000255;evidence=ECO:0000255,Domain=Kazal-like;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00798,:ENST00000260126, 	NO_DOMAIN:ENST00000260126, 	NO_DOMAIN:ENST00000370424,ENST00000370425,ENST00000370421, 	Domain=Helicase ATP-binding;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00541,Domain=Helicase C-terminal;Ontology_term=ECO:0000255;evidence=ECO:0000255|PROSITE-ProRule:PRU00542,Domain=SEC63,:ENST00000370425, NO_DOMAIN:ENST00000370424,ENST00000370421, 
0.0001	5289	SRR064441	defuse	5	1	19	3	13049414	13055304	187871072	188608460	+	+	CALR	LPP	13054924	187970880	ENSG00000179218|	ENSG00000145012|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000316448,	ENST00000312675,	 	1:ENST00000316448, 	417:ENST00000316448, 	-1:ENST00000312675, 	-1:ENST00000312675, 	MLLSVPLLLGLLGLAVAEPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDASKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEEDVPGQAKDEL:ENST00000316448-ENST00000312675, 	Intron:ENST00000316448, 	Intron:ENST00000312675, 	3UTR:ENST00000316448, 	5UTR:ENST00000312675, 	Repeat=1-1,Repeat=1-2,Repeat=1-3,Repeat=1-4,Repeat=2-1,Repeat=2-2,Repeat=2-3,Region=N-domain,Region=4 X approximate repeats,Region=P-domain,Region=Interaction with PPIB;Ontology_term=ECO:0000250;evidence=ECO:0000250,Region=3 X approximate repeats,Region=C-domain,:ENST00000316448, 	NO_DOMAIN:ENST00000316448, 	DOMAIN_UNK:ENST00000312675, 	DOMAIN_UNK:ENST00000312675, 
0.5700	5290	SRR064441	defuse	6	1	3	11	126061478	126076285	62392298	62414104	-	-	KLF15	GANAB	126061995	62407194	ENSG00000163884|	ENSG00000089597|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000296233,	ENST00000346178,	InFrame 	1:ENST00000296233, 	416:ENST00000296233, 	-1:ENST00000346178, 	-1:ENST00000346178, 	MVDHLLPVDENFSSPKCPVGYLGDRLVGRRAYHMLPSPVSEDDSDASSPCSCSSPDSQALCSCYGGGLGTESQDSILDFLLSQATLGSGGGSGSSIGASSGPVAWGPWRRAAAPVKGEHFCLPEFPLGDPDDVPRPFQPTLEEIEEFLEENMEPGVKEVPEGNSKDLDACSQLSAGPHKSHLHPGSSGRERCSPPPGGASAGGAQGPGGGPTPDGPIPVLLQIQPVPVKQESGTGPASPGQAPENVKVAQLLVNIQGQTFALVPQVVPSSNLNLPSKFVRIAPVPIAAKPVGSGPLGPGPAGLLMGQKFPKNPAAELIKMHKCTFPGCSKMYTKSSHLKAHLRRHTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPYQCPVCEKKFARSDHLSKHIKVHRFPRSSRSVRSVN:ENST00000296233-ENST00000346178, 	Intron:ENST00000296233, 	Intron:ENST00000346178, 	3UTR:ENST00000296233, 	CDS:ENST00000346178, 	NO_DOMAIN:ENST00000296233, 	NO_DOMAIN:ENST00000296233, 	DOMAIN_UNK:ENST00000346178, 	DOMAIN_UNK:ENST00000346178, 
0.0002	5291	SRR064441	defuse	8	1	6	4	75947391	75960039	19173958	19458617	-	-	COX7A2	RP11-3J1.1	75950981	19415266	ENSG00000112695|	ENSG00000248238|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000230459,	UnSpec,	UnSpec 	1:ENST00000230459, 	6:ENST00000230459, 	-1:UnSpec, 	-1:UnSpec, 	MLRNLL:ENST00000230459-UnSpec, 	2:ENST00000230459, 	-1:UnSpec, 	CDS:ENST00000230459, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000230459, 	DOMAIN_UNK:ENST00000230459, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.5700	5292	SRR064441	defuse	22	5	3	12	126061478	126076285	52626954	52662180	-	+	KLF15	KRT7	126061970	52642538	ENSG00000163884|	ENSG00000135480|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000296233,	ENST00000331817,	InFrame 	1:ENST00000296233, 	416:ENST00000296233, 	-1:ENST00000331817, 	-1:ENST00000331817, 	MVDHLLPVDENFSSPKCPVGYLGDRLVGRRAYHMLPSPVSEDDSDASSPCSCSSPDSQALCSCYGGGLGTESQDSILDFLLSQATLGSGGGSGSSIGASSGPVAWGPWRRAAAPVKGEHFCLPEFPLGDPDDVPRPFQPTLEEIEEFLEENMEPGVKEVPEGNSKDLDACSQLSAGPHKSHLHPGSSGRERCSPPPGGASAGGAQGPGGGPTPDGPIPVLLQIQPVPVKQESGTGPASPGQAPENVKVAQLLVNIQGQTFALVPQVVPSSNLNLPSKFVRIAPVPIAAKPVGSGPLGPGPAGLLMGQKFPKNPAAELIKMHKCTFPGCSKMYTKSSHLKAHLRRHTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPYQCPVCEKKFARSDHLSKHIKVHRFPRSSRSVRSVN:ENST00000296233-ENST00000331817, 	Intron:ENST00000296233, 	Intron:ENST00000331817, 	3UTR:ENST00000296233, 	CDS:ENST00000331817, 	NO_DOMAIN:ENST00000296233, 	NO_DOMAIN:ENST00000296233, 	DOMAIN_UNK:ENST00000331817, 	DOMAIN_UNK:ENST00000331817, 
0.0189	5293	SRR064441	defuse	10	9	17	1	39679869	39684560	233119881	233431459	-	-	KRT19	PCNXL2	39684409	233431249	ENSG00000171345|	ENSG00000135749|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000361566,	ENST00000258229,	FrameShift 	1:ENST00000361566, 	30:ENST00000361566, 	-1:ENST00000258229, 	-1:ENST00000258229, 	MTSYSYRQSSATSSFGGLGGGSVRFGPGVAFTSPGAQPAWCPRCCSCSGRACGPRSPGAGTTTRSRASSPTAATSTCGCSSCCCPWPCTWLFLQMRSLYFSTAVQ*:ENST00000361566-ENST00000258229, 	1:ENST00000361566, 	-1:ENST00000258229, 	CDS:ENST00000361566, 	5UTR:ENST00000258229, 	DOMAIN_UNK:ENST00000361566, 	DOMAIN_UNK:ENST00000361566, 	DOMAIN_UNK:ENST00000258229, 	DOMAIN_UNK:ENST00000258229, 
0.0002	5294	SRR064441	defuse	5	2	11	5	2016406	2022700	134259813	134260334	-	+	H19	MTND6P4	2018908	134260096	ENSG00000130600|	ENSG00000249119|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0001	5295	SRR064441	defuse	36	56	3	19	126061478	126076285	24184075	24184165	-	-	KLF15	AC092279.1	126062231	24184155	ENSG00000163884|	ENSG00000251948|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000296233,	UnSpec,	UnSpec 	0:ENST00000296233, 	0:ENST00000296233, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000296233-UnSpec, 	Intron:ENST00000296233, 	Intron:UnSpec, 	3UTR:ENST00000296233, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000296233, 	DOMAIN_UNK:ENST00000296233, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.9917	5296	SRR064441	defuse	9	2	12	12	53290971	53298868	52626954	52662180	-	+	KRT8	KRT7	53295648	52631293	ENSG00000170421|	ENSG00000135480|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000293308,	ENST00000331817,	InFrame 	1:ENST00000293308, 	177:ENST00000293308, 	179:ENST00000331817, 	469:ENST00000331817, 	MSIRVTQKSYKVSTSGPRAFSSRSYTSGPGSRISSSSFSRVGSSNFRGGLGGGYGGASGMGGITAVTVNQSLLSPLVLEVDPNIQAVRTQEKEQIKTLNNKFASFIDKVRFLEQQNKMLETKWSLLQQQKTARSNMDNMFESYINNLRRQLETLGQEKLKLEAELGNMQGLVEDFKNKYEDEINHRTAAENEFVVLKKDVDAAYMSKVELEAKVDALNDEINFLRTLNETELTELQSQISDTSVVLSMDNSRSLDLDGIIAEVKAQYEEMAKCSRAEAEAWYQTKFETLQAQAGKHGDDLRNTRNEISEMNRAIQRLQAEIDNIKNQRAKLEAAIAEAEERGELALKDARAKQEELEAALQRGKQDMARQLREYQELMSVKLALDIEIATYRKLLEGEESRLAGDGVGAVNISVMNSTGGSSSGGGIGLTLGGTMGSNALSFSSSAGPGLLKAYSIRTASASRRSARD:ENST00000293308-ENST00000331817, 	2:ENST00000293308, 	3:ENST00000331817, 	CDS:ENST00000293308, 	CDS:ENST00000331817, 	Region=Head,Region=Rod,Region=Coil 1A,Region=Linker 1,Region=Coil 1B,:ENST00000293308, 	Region=Linker 12,Region=Coil 2,Region=Necessary for interaction with PNN,Region=Tail,:ENST00000293308, 	Region=Rod,Region=Coil 1B,Region=Linker 12,Region=Coil 2,Region=Tail,:ENST00000331817, 	Region=Head,Region=Coil 1A,Region=Interaction with HPV16 E7,Region=Linker 1,:ENST00000331817, 
0.0001	5297	SRR064441	defuse	5	2	3	17	126061478	126076285	26989302	27029248	-	+	KLF15	SUPT6H	126061722	27000395	ENSG00000163884|	ENSG00000109111|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000296233,	ENST00000314616,	 	1:ENST00000296233, 	416:ENST00000296233, 	-1:ENST00000314616, 	-1:ENST00000314616, 	MVDHLLPVDENFSSPKCPVGYLGDRLVGRRAYHMLPSPVSEDDSDASSPCSCSSPDSQALCSCYGGGLGTESQDSILDFLLSQATLGSGGGSGSSIGASSGPVAWGPWRRAAAPVKGEHFCLPEFPLGDPDDVPRPFQPTLEEIEEFLEENMEPGVKEVPEGNSKDLDACSQLSAGPHKSHLHPGSSGRERCSPPPGGASAGGAQGPGGGPTPDGPIPVLLQIQPVPVKQESGTGPASPGQAPENVKVAQLLVNIQGQTFALVPQVVPSSNLNLPSKFVRIAPVPIAAKPVGSGPLGPGPAGLLMGQKFPKNPAAELIKMHKCTFPGCSKMYTKSSHLKAHLRRHTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPYQCPVCEKKFARSDHLSKHIKVHRFPRSSRSVRSVN:ENST00000296233-ENST00000314616, 	Intron:ENST00000296233, 	Intron:ENST00000314616, 	3UTR:ENST00000296233, 	5UTR:ENST00000314616, 	NO_DOMAIN:ENST00000296233, 	NO_DOMAIN:ENST00000296233, 	DOMAIN_UNK:ENST00000314616, 	DOMAIN_UNK:ENST00000314616, 
0.0002	5298	SRR064441	defuse	5	46	19	1	24184075	24184165	108113461	108113552	-	-	AC092279.1	AC114491.2	24184159	108113637	ENSG00000251948|	ENSG00000252194|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	5299	SRR064441	defuse	6	13	1	2	536816	659930	133038647	133038738	-	-	RP5-857K21.4	AC097532.1	569099	133038962	ENSG00000230021|	ENSG00000252318|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0002	5300	SRR064441	defuse	6	5	1	3	566454	567996	101292939	101313281	+	+	RP5-857K21.6	PCNP	567090	101295647	ENSG00000237973|	ENSG00000081154|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000265260,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000265260, 	-1:ENST00000265260, 	LLSSTPHEHIFGPHP*:UnSpec-ENST00000265260, 	-1:UnSpec, 	Intron:ENST00000265260, 	Intergenic:UnSpec, 	CDS:ENST00000265260, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000265260, 	DOMAIN_UNK:ENST00000265260, 
0.0002	5301	SRR064441	defuse	18	48	19	1	24184075	24184165	54692190	54879152	-	-	AC092279.1	SSBP3	24184150	54813827	ENSG00000251948|	ENSG00000157216|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000357475,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000357475, 	-1:ENST00000357475, 	PDKDDFVSLSPDGYGDSDLSGWCLQKVVVGCTESYNPEVATVHTVRKGVGDWVAESVESLGVNDFQTC*:UnSpec-ENST00000357475, 	-1:UnSpec, 	Intron:ENST00000357475, 	Intergenic:UnSpec, 	CDS:ENST00000357475, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000357475, 	DOMAIN_UNK:ENST00000357475, 
0.0002	5302	SRR064441	defuse	5	6	1	7	565020	566063	132719842	132720699	+	-	RP5-857K21.8	AC008038.2	565829	132720540	ENSG00000225630|	ENSG00000256322|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0004	5303	SRR064441	defuse	7	3	8	19	145618444	145634753	49118591	49122433	-	-	CPSF1	RPL18	145625209	49119357	ENSG00000071894|	ENSG00000063177|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000349769,	ENST00000084795,	FrameShift 	1:ENST00000349769, 	360:ENST00000349769, 	-1:ENST00000084795, 	-1:ENST00000084795, 	MYAVYKQAHPPTGLEFSMYCNFFNNSERNLVVAGTSQLYVYRLNRDAEALTKNDRSTEGKAHREKLELAASFSFFGNVMSMASVQLAGAKRDALLLSFKDAKLSVVEYDPGTHDLKTLSLHYFEEPELRDGFVQNVHTPRVRVDPDGRCAAMLVYGTRLVVLPFRRESLAEEHEGLVGEGQRSSFLPSYIIDVRALDEKLLNIIDLQFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSIVAISLNITQKVHPVIWSLTSLPFDCTQALAVPKPIGGVVVFAVNSLLYLNQSVPPYGVALNSLTTGTTAFPLRTQEGVRITLDCAQATFISYDKMVISLKGGEIYVLTLITDGMRSVRAFLWHCPALR*:ENST00000349769-ENST00000084795, 	11:ENST00000349769, 	5:ENST00000084795, 	CDS:ENST00000349769, 	CDS:ENST00000084795, 	NO_DOMAIN:ENST00000349769, 	NO_DOMAIN:ENST00000349769, 	NO_DOMAIN:ENST00000084795, 	Domain=Ribosomal_L18e/L15P;Ontology_term=ECO:0000259;evidence=ECO:0000259|Pfam:PF17135,:ENST00000084795, 
0.0004	5304	SRR064441	defuse	5	6	1	1	151227179	151239955	536816	659930	+	-	PSMD4	RP5-857K21.4	151234649	569104	ENSG00000159352|	ENSG00000230021|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000368881,	UnSpec,	FrameShift 	1:ENST00000368881, 	2463:ENST00000368881, 	-1:UnSpec, 	-1:UnSpec, 	MVLESTMVW*:ENST00000368881-UnSpec, 	2:ENST00000368881, 	-1:UnSpec, 	CDS:ENST00000368881, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000368881, 	DOMAIN_UNK:ENST00000368881, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5305	SRR064441	defuse	6	3	15	2	41576203	41601901	173020757	173020848	+	-	AC012652.1	snoU13.143	41577563	173030051	ENSG00000247556|	ENSG00000238572|	breast_cancer	SRR064439,SRR064441,	breast_cancer,	NO_KINASE																
0.0001	5306	SRR064441	defuse	14	154	3	2	126061478	126076285	33050510	33151760	-	+	KLF15	AL121656.4	126062227	33141332	ENSG00000163884|	ENSG00000230876|	breast_cancer	SRR064437,SRR064441,	breast_cancer,normal_tissue,	NO_KINASE	ENST00000296233,	UnSpec,	UnSpec 	0:ENST00000296233, 	0:ENST00000296233, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000296233-UnSpec, 	Intron:ENST00000296233, 	Intron:UnSpec, 	3UTR:ENST00000296233, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000296233, 	DOMAIN_UNK:ENST00000296233, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5307	SRR064441	defuse	6	4	11	12	110045605	110167447	34372314	34372611	-	-	RDX	AC140847.1	110150415	34372630	ENSG00000137710|	ENSG00000243092|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000343115,	UnSpec,	UnSpec 	1:ENST00000343115, 	1:ENST00000343115, 	-1:UnSpec, 	-1:UnSpec, 	M:ENST00000343115-UnSpec, 	2:ENST00000343115, 	-1:UnSpec, 	CDS:ENST00000343115, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000343115, 	DOMAIN_UNK:ENST00000343115, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5308	SRR064441	defuse	57	940	22	17	21271714	21308037	33474836	33516364	+	+	CRKL	UNC45B	21265476	33478317	ENSG00000099942|	ENSG00000141161|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	UnSpec,	ENST00000268876,	FrameShift 	-1:UnSpec, 	-1:UnSpec, 	-1:ENST00000268876, 	-1:ENST00000268876, 	GEWVFRTPHFPRPTAGRGF*:UnSpec-ENST00000268876, 	-1:UnSpec, 	Intron:ENST00000268876, 	Intergenic:UnSpec, 	CDS:ENST00000268876, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:ENST00000268876, 	DOMAIN_UNK:ENST00000268876, 
0.0003	5309	SRR064441	defuse	20	32	1	2	91726323	91870426	159313476	159539391	-	+	HFM1	PKP4	91852783	159440863	ENSG00000162669|	ENSG00000144283|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000370421,	UnSpec,	FrameShift 	1:ENST00000370421, 	2453:ENST00000370421, 	-1:UnSpec, 	-1:UnSpec, 	MLKSNDCLFSLENLFFEKPDEVENHPDNEKSLDWFLPPAPLISEIPDTQELEEELESHKLLGQEKRPKMLTSNLKITNEDTNYISLTQKFQFAFPSDKYEQDDLNLEGVGNNDLSHIAGKLTYASQKYKNHIGTEIAPEKSVPDDTKLVNFAEDKGESTSVFRKR*:ENST00000370421-UnSpec, 	Intron:ENST00000370421, 	-1:UnSpec, 	CDS:ENST00000370421, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:ENST00000370421, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.0002	5310	SRR064441	defuse	57	61	19	2	24184075	24184165	33050510	33151760	-	+	AC092279.1	AL121656.4	24184150	33141318	ENSG00000251948|	ENSG00000230876|	breast_cancer	SRR064439,SRR064441,	breast_cancer,	NO_KINASE																
0.0002	5311	SRR064441	defuse	39	280	5	1	71146740	71146942	108113461	108113552	+	-	AC116340.1	AC114491.2	71146769	108113428	ENSG00000239935|	ENSG00000252194|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE																
0.0001	5312	SRR064441	defuse	5	1	10	15	99185917	99193198	45927001	45983492	+	+	PGAM1	SQRDL	99193054	46162428	ENSG00000171314|	ENSG00000137767|	breast_cancer	SRR064441,	breast_cancer,	NO_KINASE	ENST00000334828,	UnSpec,	UnSpec 	0:ENST00000334828, 	0:ENST00000334828, 	0:UnSpec, 	0:UnSpec, 	null:ENST00000334828-UnSpec, 	Intron:ENST00000334828, 	Intron:UnSpec, 	3UTR:ENST00000334828, 	Intergenic:UnSpec, 	DOMAIN_UNK:ENST00000334828, 	DOMAIN_UNK:ENST00000334828, 	DOMAIN_UNK:UnSpec, 	DOMAIN_UNK:UnSpec, 
0.4661	5313	SRR064441	defuse	23	5	17	8	76670130	76778379	117654369	117779164	-	-	CYTH1	EIF3H	76778284	117768258	ENSG00000108669|	ENSG00000147677|	breast_cancer	SRR064440,SRR064441,	breast_cancer,	NO_KINASE	ENST00000262763,	ENST00000276682,	InFrame 	1:ENST00000262763, 	7:ENST00000262763, 	1:ENST00000276682, 	366:ENST00000276682, 	MEEDDSYDHSIGKRSKMYSRHAQRIPPGKKMASRKEGTGSTATSSSSTAGAAGKGKGKGGSGDSAVKQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKANITFEYMFEEVPIVIKNSHLINVLMWELEKKSAVADKHELLSLASSNHLGKNLQLLMDRVDEMSQDIVKYNTYMRNTSKQQQQKHQYQQRRQQENMQRQSRGEPPLPEEDLSKLFKPPQPPARMDSLLIAGQINTYCQNIKEFTAQNLGKLFMAQALQEYNN:ENST00000262763-ENST00000276682, 	1:ENST00000262763, 	-1:ENST00000276682, 	CDS:ENST00000262763, 	5UTR:ENST00000276682, 	DOMAIN_UNK:ENST00000262763, 	DOMAIN_UNK:ENST00000262763, 	DOMAIN_UNK:ENST00000276682, 	DOMAIN_UNK:ENST00000276682, 
0.0002	5314	SRR064286	general	2	6	1	1	114354371	114354332	114442494	114442524	-	-	RSBN1,	AP4B1,RP5-1073O3.5.1,	114354371	114442524	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5315	SRR064286	general	10	3	12	12	120628114	120628101	120785317	120785273	-	-	GCN1L1,	MSI1,	120628114	120785273	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5316	SRR064286	general	4	5	14	14	96968900	96968937	96904172	96904215	+	+	PAPOLA,	AK7,	96968937	96904172	NULL|	NULL|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE																
0.0002	5317	SRR064286	general	4	8	17	17	57992018	57992064	57917129	57917169	+	+	RPS6KB1,	VMP1,	57992064	57917129	NULL|	NULL|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE																
0.0002	5318	SRR064286	general	4	9	20	17	49411666	49411710	59430949	59430980	+	+	BCAS4,	BCAS3,	49411710	59430949	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5319	SRR064286	general	212	161	20	17	49411666	49411710	59445688	59445732	+	+	BCAS4,	BCAS3,	49411710	59445688	NULL|	NULL|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE																
0.0002	5320	SRR064286	general	2	3	20	17	49413478	49413510	59445688	59445725	+	+	BCAS4,	BCAS3,	49413510	59445688	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5321	SRR064286	general	6	2	19	19	11097242	11097269	11015627	11015655	+	+	SMARCA4,	CARM1,	11097269	11015627	NULL|	NULL|	breast_cancer	SRR064286,	breast_cancer,	NO_KINASE																
0.0002	5322	SRR064286	general	16	31	20	20	47538504	47538547	46365686	46365640	+	-	ARFGEF2,	SULF2,	47538547	46365640	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5323	SRR064286	general	2	21	1	5	44569318	44569358	122736893	122736864	+	-	RP5-1198O20.4.1,	CEP120,	44569358	122736864	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5324	SRR064286	general	2	4	17	9	79478000	79477961	6835397	6835419	-	+	ACTG1,	KDM4C,	79478000	6835397	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5325	SRR064286	general	2	6	17	9	79477988	79477953	6835399	6835424	-	+	ACTG1,	KDM4C,	79477988	6835399	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5326	SRR064287	general	28	13	19	19	580741	580782	13135835	13135879	+	+	BSG,	NFIX,	580782	13135835	NULL|	NULL|	breast_cancer	SRR064287,	breast_cancer,	NO_KINASE																
0.0002	5327	SRR064287	general	8	6	8	3	146016728	146016693	142546275	142546253	-	-	RPL8,	PCOLCE2,	146016728	142546253	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5328	SRR064287	general	2	3	9	9	123719594	123719563	89771488	89771530	-	+	C5,	C9orf170,	123719594	89771488	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5329	SRR064287	general	8	7	9	9	139438516	139438476	134062676	134062717	-	+	NOTCH1,	NUP214,	139438516	134062676	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5331	SRR064438	general	2	4	17	17	57232530	57232492	34863763	34863725	-	-	SKA2,	MYO19,	57232530	34863725	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5332	SRR064438	general	16	29	17	17	48943465	48943419	35880751	35880706	-	-	TOB1,	SYNRG,	48943465	35880706	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5333	SRR064438	general	2	5	20	17	33665893	33665849	36478009	36478049	-	+	TRPC4AP,	MRPL45,	33665893	36478009	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5334	SRR064438	general	2	108	1	17	64254723	64254754	37359275	37359316	+	+	ROR1,	RPL19,	64254754	37359275	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5335	SRR064438	general	6	42	17	17	35479493	35479453	37374426	37374385	-	-	ACACA,	STAC2,	35479493	37374385	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5336	SRR064438	general	20	15	20	17	56964528	56964573	37934020	37933978	+	-	VAPB,	IKZF3,	56964573	37933978	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5337	SRR064438	general	22	45	17	17	57970646	57970686	47021337	47021292	+	-	RPS6KB1,	SNF8,	57970686	47021292	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5338	SRR064438	general	8	6	17	17	37595444	37595418	48548389	48548428	-	+	MED1,	ACSF2,	37595444	48548389	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5339	SRR064438	general	6	7	17	17	37607334	37607291	53218671	53218706	-	+	MED1,	STXBP4,	37607334	53218671	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5340	SRR064438	general	6	3	19	19	15443144	15443101	14104707	14104664	-	-	BRD4,	RFX1,	15443144	14104664	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5341	SRR064438	general	20	10	20	20	45853013	45852970	34078463	34078504	-	+	ZMYND8,	CEP250,	45853013	34078463	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5342	SRR064438	general	6	5	17	20	37793453	37793484	53259997	53260033	+	+	STARD3,	DOK5,	37793484	53259997	NULL|	NULL|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5343	SRR064438	general	4	8	20	20	57227109	57227143	55929088	55929133	+	+	STX16,STX16-NPEPL1,STX16,	RAE1,	57227143	55929088	NULL|	NULL|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5344	SRR064438	general	2	27	17	3	37359271	37359291	141762811	141762771	+	-	RPL19,	TFDP2,	37359291	141762771	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5345	SRR064438	general	10	2	8	3	146016728	146016693	142546275	142546259	-	-	RPL8,	PCOLCE2,	146016728	142546259	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5346	SRR064438	general	18	9	1	4	247094920	247094880	76846964	76846925	-	-	AHCTF1,	NAAA,	247094920	76846925	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5347	SRR064438	general	14	133	17	7	37359245	37359291	102782157	102782117	+	-	RPL19,	NAPEPLD,	37359291	102782117	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5348	SRR064438	general	8	4	20	X	49456930	49456955	12995090	12995133	+	+	BCAS4,	TMSB4X,	49456955	12995090	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5349	SRR064439	general	4	5	17	17	57232536	57232492	34863351	34863319	-	-	SKA2,	MYO19,	57232536	34863319	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5350	SRR064439	general	6	4	17	17	57232517	57232492	34863763	34863721	-	-	SKA2,	MYO19,	57232517	34863721	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5351	SRR064439	general	32	32	17	17	48943462	48943419	35880751	35880706	-	-	TOB1,	SYNRG,	48943462	35880706	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5352	SRR064439	general	2	6	7	17	102782155	102782111	37358679	37358721	-	+	NAPEPLD,	RPL19,	102782155	37358679	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5353	SRR064439	general	82	32	17	17	35479498	35479453	37374426	37374384	-	-	ACACA,	STAC2,	35479498	37374384	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5354	SRR064439	general	18	5	20	17	56964534	56964573	37922746	37922714	+	-	VAPB,	IKZF3,	56964573	37922714	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5355	SRR064439	general	46	12	20	17	56964531	56964573	37934020	37933984	+	-	VAPB,	IKZF3,	56964573	37933984	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5356	SRR064439	general	42	31	17	17	57970643	57970686	47021337	47021292	+	-	RPS6KB1,	SNF8,	57970686	47021292	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5357	SRR064439	general	18	8	17	17	37607318	37607291	53218671	53218713	-	+	MED1,	STXBP4,	37607318	53218671	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5358	SRR064439	general	8	6	20	19	56886134	56886178	17256207	17256248	+	+	RAB22A,	MYO9B,	56886178	17256207	NULL|	NULL|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5359	SRR064439	general	14	2	19	19	12371235	12371202	55898010	55898031	-	+	ZNF44,	RPL28,	12371235	55898010	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5360	SRR064439	general	44	12	20	20	45853012	45852970	34078463	34078500	-	+	ZMYND8,	CEP250,	45853012	34078463	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5361	SRR064439	general	24	3	20	20	57227101	57227143	55929088	55929121	+	+	STX16,STX16-NPEPL1,STX16,	RAE1,	57227143	55929088	NULL|	NULL|	breast_cancer	SRR064438,SRR064439,	breast_cancer,	NO_KINASE																
0.0002	5362	SRR064439	general	6	2	3	3	33055589	33055548	32483332	32483363	-	+	GLB1,	CMTM7,	33055589	32483332	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5363	SRR064439	general	6	2	15	3	66795476	66795451	185136317	185136343	-	+	RPL4,	MAP3K13,	66795476	185136317	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5364	SRR064439	general	40	7	1	4	247094916	247094880	76846964	76846921	-	-	AHCTF1,	NAAA,	247094916	76846921	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5365	SRR064439	general	2	3	15	4	69072793	69072768	165118248	165118213	-	-	ANP32A,	MARCH1,	69072793	165118213	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5366	SRR064439	general	6	51	17	7	37359251	37359287	102782161	102782123	+	-	RPL19,	NAPEPLD,	37359287	102782123	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5367	SRR064440	general	20	2	11	11	118888694	118888668	27603248	27603275	-	+	RPS25,	BDNF-AS1,	118888694	27603248	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5368	SRR064440	general	4	49	8	17	125551309	125551266	38062238	38062196	-	-	TATDN1,	GSDMB,	125551309	38062196	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5369	SRR064440	general	20	5	8	17	125551196	125551169	38062238	38062193	-	-	TATDN1,	GSDMB,	125551196	38062193	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5370	SRR064440	general	4	19	8	17	125551306	125551266	38062524	38062482	-	-	TATDN1,	GSDMB,	125551306	38062482	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5371	SRR064440	general	10	121	8	17	125551308	125551266	38066177	38066131	-	-	TATDN1,	GSDMB,	125551308	38066131	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5372	SRR064440	general	46	16	8	17	125551213	125551169	38066177	38066133	-	-	TATDN1,	GSDMB,	125551213	38066133	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5373	SRR064440	general	16	4	3	3	4418055	4418014	37170640	37170607	-	-	SUMF1,	LRRFIP2,	4418055	37170607	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5374	SRR064440	general	4	3	5	5	139825535	139825560	141234001	141233961	+	-	ANKHD1,ANKHD1-EIF4EBP3,ANKHD1,	PCDH1,	139825560	141233961	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5375	SRR064440	general	44	95	17	7	37359246	37359287	102782161	102782120	+	-	RPL19,	NAPEPLD,	37359287	102782120	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5376	SRR064440	general	6	4	17	7	37359238	37359259	102782289	102782252	+	-	RPL19,	NAPEPLD,	37359259	102782252	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5377	SRR064440	general	8	9	17	8	38465503	38465538	79485046	79485079	+	+	RARA,	PKIA,	38465538	79485046	NULL|	NULL|	breast_cancer	SRR064440,	breast_cancer,	NO_KINASE																
0.0002	5378	SRR064440	general	10	15	17	8	76778323	76778284	117768258	117768219	-	-	CYTH1,	EIF3H,	76778323	117768219	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5379	SRR064441	general	2	73	8	17	125551310	125551266	38062238	38062194	-	-	TATDN1,	GSDMB,	125551310	38062194	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5380	SRR064441	general	34	4	8	17	125551196	125551169	38062238	38062196	-	-	TATDN1,	GSDMB,	125551196	38062196	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5381	SRR064441	general	2	34	8	17	125551308	125551266	38062524	38062484	-	-	TATDN1,	GSDMB,	125551308	38062484	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5382	SRR064441	general	2	3	8	17	125551309	125551266	38063240	38063215	-	-	TATDN1,	GSDMB,	125551309	38063215	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5383	SRR064441	general	6	235	8	17	125551309	125551266	38066177	38066133	-	-	TATDN1,	GSDMB,	125551309	38066133	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5384	SRR064441	general	46	14	8	17	125551210	125551169	38066177	38066132	-	-	TATDN1,	GSDMB,	125551210	38066132	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5385	SRR064441	general	8	4	3	3	4452593	4452549	37170640	37170596	-	-	SUMF1,	LRRFIP2,	4452593	37170596	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5386	SRR064441	general	2	6	1	5	45243296	45243336	33162561	33162545	+	-	RPS8,	CTD-2066L21.3.1,	45243336	33162545	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5387	SRR064441	general	10	4	5	5	139825515	139825560	141234001	141233975	+	-	ANKHD1,ANKHD1-EIF4EBP3,ANKHD1,	PCDH1,	139825560	141233975	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5388	SRR064441	general	2	2	12	5	6646103	6646135	159378287	159378309	+	+	GAPDH,	ADRA1B,	6646135	159378287	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5389	SRR064441	general	6	33	17	7	37359252	37359287	102782161	102782123	+	-	RPL19,	NAPEPLD,	37359287	102782123	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5390	SRR064441	general	18	2	17	8	76778315	76778284	117671219	117671177	-	-	CYTH1,	EIF3H,	76778315	117671177	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5391	SRR064441	general	14	2	17	8	76778324	76778284	117738411	117738387	-	-	CYTH1,	EIF3H,	76778324	117738387	NULL|	NULL|	breast_cancer			NO_KINASE																
0.0002	5392	SRR064441	general	46	7	17	8	76778315	76778284	117768258	117768224	-	-	CYTH1,	EIF3H,	76778315	117768224	NULL|	NULL|	breast_cancer			NO_KINASE																
